In silico pathway reconstruction: Iron-sulfur cluster biogenesis in Saccharomyces cerevisiae

BMC Systems Biology

Volumn 1, Issue , 2007, Pages

  Alves, Rui ^a   Sorribas, Albert ^a  

^a UNIVERSITY OF LLEIDA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

SACCHAROMYCES CEREVISIAE;

CHAPERONE; IRON SULFUR PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN;

ARTICLE; BIOLOGICAL MODEL; BIOLOGY; GENE REGULATORY NETWORK; GENETICS; METABOLISM; METHODOLOGY; PHYLOGENY; SACCHAROMYCES CEREVISIAE;

COMPUTATIONAL BIOLOGY; GENE REGULATORY NETWORKS; IRON-SULFUR PROTEINS; METABOLIC NETWORKS AND PATHWAYS; MODELS, BIOLOGICAL; MOLECULAR CHAPERONES; PHYLOGENY; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 38149030146     PISSN: None     EISSN: 17520509     Source Type: Journal    
DOI: 10.1186/1752-0509-1-10     Document Type: Article

References (128)

1. Alves R Antunes F Salvador A Tools for kinetic modeling of biochemical networks Nat Biotechnol 2006, 24(6):667-672. 16763599
2. Francke C Siezen RJ Teusink B Reconstructing the metabolic network of a bacterium from its genome Trends Microbiol 2005, 13(11):550-558. 16169729
3. Ideker T A systems approach to discovering signaling and regulatory pathways - or, how to digest large interaction networks into relevant pieces Adv Exp Med Biol 2004, 547:21-30. 15230090
4. Ideker T Winslow LR Lauffenburger AD Bioengineering and systems biology Ann Biomed Eng 2006, 34(2):257-264. 16474915
5. Karp PD Call for an enzyme genomics initiative Genome Biol 2004, 5(8):401. 507876 15287973
6. Karp PD Paley S Krieger CJ Zhang P An evidence ontology for use in pathway/genome databases Pac Symp Biocomput 2004:190-201. 14992503
7. Karp PD Paley S Romero P The Pathway Tools software Bioinformatics 2002, 18(Suppl 1):S225-232. 12169551
8. Nakao M Bono H Kawashima S Kamiya T Sato K Goto S Kanehisa M Genome-scale Gene Expression Analysis and Pathway Reconstruction in KEGG Genome Inform Ser Workshop Genome Inform 1999, 10:94-103. 11072346
9. Nikitin F Rance B Itoh M Kanehisa M Lisacek F Using Protein Motif Combinations to Update KEGG Pathway Maps and Orthologue Tables Genome Inform 2004, 15(2):266-75. 15706512
10. Ogata H Goto S Fujibuchi W Kanehisa M Computation with the KEGG pathway database Biosystems 1998, 47(1-2):119-128. 9715755
11. de Lichtenberg U Jensen LJ Brunak S Bork P Dynamic complex formation during the yeast cell cycle Science 2005, 307(5710):724-727. 15692050
12. Christensen O Christensen KL Birkhauser Approximation Theory: From Taylor Polynomials to Wavelets. 2005.
13. Heinrich R Rapoport TA Linear Theory of Enzymatic Chains - Its Application for Analysis of Crossover Theorem and of Glycolysis of Human Erythrocytes Acta Biologica et Medica Germanica 1973, 31(4):479-494. 4150081
14. Hernandez-Bermejo B Fairen V Sorribas A Power-law modeling based on least-squares minimization criteria Mathematical Biosciences 1999, 161(1-2):83-94. 10546442
15. Hernandez-Bermejo B Fairen V Sorribas A Power-law modeling based on least-squares criteria: Consequences for system analysis and simulation Mathematical Biosciences 2000, 167(2):87-107. 10998483
16. Savageau MA Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions J Theor Biol 1969, 25(3):365-369. 5387046
17. Savageau MA Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power-law approximation J Theor Biol 1969, 25(3):370-379. 5387047
18. Savageau MA Biochemical systems analysis. 3. Dynamic solutions using a power-law approximation J Theor Biol 1970, 26(2):215-226. 5434343
19. Sorribas A Savageau MA A comparison of variant theories of intact biochemical systems. II. Flux-oriented and metabolic control theories Math Biosci 1989, 94(2):195-238. 2520169
20. Alves R Savageau MA Systemic properties of ensembles of metabolic networks: Application of graphical and statistical methods to simple unbranched pathways Bioinformatics 2000, 16(6):534-547. 10980151
21. Alves R Savageau MA Extending the method of mathematically controlled comparison to include numerical comparisons Bioinformatics 2000, 16(9):786-798. 11108701
22. Alves R Savageau MA Comparing systemic properties of ensembles of biological networks by graphical and statistical methods Bioinformatics 2000, 16(6):527-533. 10980150
23. Salvador A Synergism analysis of biochemical systems. I. Conceptual framework Mathematical Biosciences 2000, 163(2):105-129. 10701301
24. Voit EO Voit EO Canonical Nonlinear Modeling: S-System Approach to Understanding Complexity New York: Chapman & Hall; 1991.
25. Beinert H Iron-sulfur proteins: Ancient structures, still full of surprises J Biol Inorg Chem 2000, 5(1):2-15. 10766431
26. Beinert H A tribute to sulfur Eur J Biochem 2000, 267(18):5657-5664. 10971575
27. Frazzon J Dean DR Feedback regulation of iron-sulfur cluster biosynthesis Proc Natl Acad Sci USA 2001, 98(26):14751-14753. 64927 11752417
28. Frazzon J Dean DR Formation of iron-sulfur clusters in bacteria: An emerging field in bioinorganic chemistry Curr Opin Chem Biol 2003, 7(2):166-173. 12714048
29. Frazzon J Fick JR Dean DR Biosynthesis of iron-sulphur clusters is a complex and highly conserved process Biochem Soc Trans 2002, 30(4):680-685. 12196163
30. Kiley PJ Beinert H The role of Fe-S proteins in sensing and regulation in bacteria Curr Opin Microbiol 2003, 6(2):181-185. 12732309
31. Rees DC Great metalloclusters in enzymology Annu Rev Biochem 2002, 71:221-246. 12045096
32. Rees DC Howard JB The interface between the biological and inorganic worlds: Iron-sulfur metalloclusters Science 2003, 300(5621):929-931. 12738849
33. Schilke B Voisine C Beinert H Craig E Evidence for a conserved system for iron metabolism in the mitochondria of Saccharomyces cerevisiae Proc Natl Acad Sci USA 1999, 96(18):10206-10211. 17867 10468587
34. Vilella F Alves R Rodriguez-Manzaneque MT Belli G Swaminathan S Sunnerhagen P Herrero E Evolution and cellular function of monothiol glutaredoxins: Involvement in iron-sulphur cluster assembly Comp Funct Genomics 2004, 5(4):328-341.
35. Lill R Diekert K Kaut A Lange H Pelzer W Prohl C Kispal G The essential role of mitochondria in the biogenesis of cellular iron-sulfur proteins Biol Chem 1999, 380(10):1157-66. 10595578
36. Rodriguez-Manzaneque MT Tamarit J Belli G Ros J Herrero E Grx5 is a mitochondrial glutaredoxin required for the activity of iron/sulfur enzymes Mol Biol Cell 2002, 13(4):1109-1121. 102255 11950925
37. Manzella L Barros MH Nobrega FG ARH1 of Saccharomyces cerevisiae: A new essential gene that codes for a protein homologous to the human adrenodoxin reductase Yeast 1998, 14(9):839-846. 9818721
38. Barras F Loiseau L Py B How Escherichia coli and Saccharomyces cerevisiae build Fe/S proteins Adv Microb Physiol 2005, 50:41-101. 16221578
39. Lill R Dutkiewicz R Elsasser HP Hausmann A Netz DJ Pierik AJ Stehling O Urzica E Muhlenhoff U Mechanisms of iron-sulfur protein maturation in mitochondria, cytosol and nucleus of eukaryotes Biochim Biophys Acta 2006, 1763(7):652-667. 16843540
40. Lill R Muhlenhoff U Iron-sulfur-protein biogenesis in eukaryotes Trends Biochem Sci 2005, 30(3):133-141. 15752985
41. Lill R Muhlenhoff U Iron-Sulfur Protein Biogenesis in Eukaryotes: Components and Mechanisms Annu Rev Cell Dev Biol; 2006. 16824008
42. Ye H Pilon M Pilon-Smits EA CpNifS-dependent iron-sulfur cluster biogenesis in chloroplasts New Phytol 2006, 171(2):285-292. 16866936
43. Fontecave M Choudens SO Py B Barras F Mechanisms of iron-sulfur cluster assembly: The SUF machinery J Biol Inorg Chem 2005, 10(7):713-721. 16211402
44. Alves R Herrero E Sorribas A Predictive reconstruction of the mitochondrial iron-sulfur cluster assembly metabolism: I. The role of the protein pair ferredoxin-ferredoxin reductase (Yah1-Arh1) Proteins 2004, 56(2):354-366. 15211518
45. Alves R Herrero E Sorribas A Predictive reconstruction of the mitochondrial iron-sulfur cluster assembly metabolism. II. Role of glutaredoxin Grx5 Proteins 2004, 57(3):481-492. 15382238
46. Stapley BJ Benoit G Biobibliometrics: Information retrieval and visualization from co-occurrences of gene names in Medline abstracts Pac Symp Biocomput 2000:529-40. 10902200
47. Hoffmann R Krallinger M Andres E Tamames J Blaschke C Valencia A Text mining for metabolic pathways, signaling cascades, and protein networks SciSTKE 2005, 2005(283):e21.
48. Hoffmann R Valencia A A gene network for navigating the literature Nat Genet 2004, 36(7):664. 15226743
49. Hoffmann R Valencia A Implementing the iHOP concept for navigation of biomedical literature Bioinformatics 2005, 21(Suppl 2):iI252-ii258. 16204114
50. Adam AC Bornhovd C Prokisch H Neupert W Hell K The Nfs1 interacting protein Isd11 has an essential role in Fe/S cluster biogenesis in mitochondria EMBO J 2006, 25(1):174-183. 1356348 16341090
51. Wiedemann N Urzica E Guiard B Muller H Lohaus C Meyer HE Ryan MT Meisinger C Muhlenhoff U Lill R Essential role of Isd11 in mitochondrial iron-sulfur cluster synthesis on Isu scaffold proteins EMBO J 2006, 25(1):184-195. 1356349 16341089
52. Li H Pellegrini M Eisenberg D Detection of parallel functional modules by comparative analysis of genome sequences Nat Biotechnol 2005, 23(2):253-260. 15696156
53. Pellegrini M Marcotte EM Thompson MJ Eisenberg D Yeates TO Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles Proc Natl Acad Sci USA 1999, 96(8):4285-4288. 16324 10200254
54. Tovchigrechko A Vakser IA Development and testing of an automated approach to protein docking Proteins 2005, 60(2):296-301. 15981259
55. Tovchigrechko A Wells CA Vakser IA Docking of protein models Protein Sci 2002, 11(8):1888-1896. 12142443
56. Vajda S Vakser IA Sternberg MJ Janin J Modeling of protein interactions in genomes Proteins 2002, 47(4):444-446. 12001222
57. Vakser IA Protein docking for low-resolution structures Protein Eng 1995, 8(4):371-377. 7567922
58. Vakser IA Low-resolution docking: Prediction of complexes for underdetermined structures Biopolymers 1996, 39(3):455-464. 8756522
59. Vakser IA Evaluation of GRAMM low-resolution docking methodology on the hemagglutinin-antibody complex Proteins 1997 Suppl 1 226-230. 9485517
60. Vakser IA Matar OG Lam CF A systematic study of low-resolution recognition in protein - protein complexes Proc Natl Acad Sci USA 1999, 96(15):8477-8482. 17541 10411900
61. He Y Alam SL Proteasa SV Zhang Y Lesuisse E Dancis A Stemmler TL Yeast frataxin solution structure, iron binding, and ferrochelatase interaction Biochemistry 2004, 43(51):16254-16262. 15610019
62. Ritchie DW Evaluation of protein docking predictions using Hex 3.1 in CAPRI rounds 1 and 2 Proteins 2003, 52(1):98-106. 12784374
63. Halperin I Ma B Wolfson H Nussinov R Principles of docking: An overview of search algorithms and a guide to scoring functions Proteins 2002, 47(4):409-443. 12001221
64. Smith GR Sternberg MJ Prediction of protein-protein interactions by docking methods Curr Opin Struct Biol 2002, 12(1):28-35. 11839486
65. Ho Y Gruhler A Heilbut A Bader GD Moore L Adams SL Millar A Taylor P Bennett K Boutilier K Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry Nature 2002, 415(6868):180-183. 11805837
66. Ross-Macdonald P Functional analysis of the yeast genome Funct Integr Genomics 2000, 1(2):99-113. 11793226
67. Uetz P Giot L Cagney G Mansfield TA Judson RS Knight JR Lockshon D Narayan V Srinivasan M Pochart P A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae Nature 2000, 403(6770):623-627. 10688190
68. Uetz P Hughes RE Systematic and large-scale two-hybrid screens Curr Opin Microbiol 2000, 3(3):303-308. 10851163
69. Walhout AJ Vidal M High-throughput yeast two-hybrid assays for large-scale protein interaction mapping Methods 2001, 24(3):297-306. 11403578
70. Ni TC Savageau MA Model assessment and refinement using strategies from biochemical systems theory: Application to metabolism in human red blood cells Journal of Theoretical Biology 1996, 179(4):329-368. 8763353
71. Sorribas A Savageau MA Strategies for representing metabolic pathways within biochemical systems theory: Reversible pathways Math Biosci 1989, 94(2):239-269. 2520170
72. Voit EO Savageau MA Accuracy of alternative representations for integrated biochemical systems Biochemistry 1987, 26(21):6869-6880. 3427048
73. Lange H Kaut A Kispal G Lill R A mitochondrial ferredoxin is essential for biogenesis of cellular iron-sulfur proteins Proc Natl Acad Sci USA 2000, 97(3):1050-1055. 15518 10655482
74. Li J Saxena S Pain D Dancis A Adrenodoxin reductase homolog (Arh1p) of yeast mitochondria required for iron homeostasis J Biol Chem 2001, 276(2):1503-1509. 11035018
75. Barros MH Nobrega FG YAH1 of Saccharomyces cerevisiae: A new essential gene that codes for a protein homologous to human adrenodoxin Gene 1999, 233(1-2):197-203. 10375636
76. Bulteau AL O'Neill HA Kennedy MC Ikeda-Saito M Isaya G Szweda LI Frataxin acts as an iron chaperone protein to modulate mitochondrial aconitase activity Science 2004, 305(5681):242-245. 15247478
77. Gerber J Muhlenhoff U Lill R An interaction between frataxin and Isu1/ Nfs1 that is crucial for Fe/S cluster synthesis on Isu1 EMBO Rep 2003, 4(9):906-911. 1326356 12947415
78. Irazusta V Cabiscol E Reverter B Ros J Tamarit J Manganese is the link between frataxin and iron-sulfur deficiency in the yeast model of Friedreich ataxia J Biol Chem 2006, 281(18):12227-12232. 16510442
79. Ramazzotti A Vanmansart V Foury F Mitochondrial functional interactions between frataxin and Isu1p, the iron-sulfur cluster scaffold protein, in Saccharomyces cerevisiae FEBS Lett 2004, 557(1-3):215-220. 14741370
80. Gakh O Park S Liu G Macomber L Imlay JA Ferreira GC Isaya G Mitochondrial iron detoxification is a primary function of frataxin that limits oxidative damage and preserves cell longevity Hum Mol Genet 2006, 15(3):467-479. 16371422
81. Park S Gakh O O'Neill HA Mangravita A Nichol H Ferreira GC Isaya G Yeast frataxin sequentially chaperones and stores iron by coupling protein assembly with iron oxidation J Biol Chem 2003, 278(33):31340-31351. 12732649
82. Chen OS Kaplan J YFH1-mediated iron homeostasis is independent of mitochondrial respiration FEBS Lett 2001, 509(1):131-134. 11734220
83. Gonzalez-Cabo P Vazquez-Manrique RP Garcia-Gimeno MA Sanz P Palau F Frataxin interacts functionally with mitochondrial electron transport chain proteins Hum Mol Genet 2005, 14(15):2091-2098. 15961414
84. Isaya G O'Neill HA Gakh O Park S Mantcheva R Mooney SM Functional studies of frataxin Acta Paediatr Suppl 2004, 93(445):68-71. 15176725
85. Nichol H Gakh O O'Neill HA Pickering IJ Isaya G George GN Structure of frataxin iron cores: An X-ray absorption spectroscopic study Biochemistry 2003, 42(20):5971-5976. 12755598
86. Aloria K Schilke B Andrew A Craig EA Iron-induced oligomerization of yeast frataxin homologue Yfh1 is dispensable in vivo EMBO Rep 2004, 5(11):1096-1101. 1299167 15472712
87. Kispal G Csere P Prohl C Lill R The mitochondrial proteins Atm1p and Nfs1p are essential for biogenesis of cytosolic Fe/S proteins EMBO J 1999, 18(14):3981-3989. 1171474 10406803
88. Li J Kogan M Knight SA Pain D Dancis A Yeast mitochondrial protein, Nfs1p, coordinately regulates iron-sulfur cluster proteins, cellular iron uptake, and iron distribution J Biol Chem 1999, 274(46):33025-33034. 10551871
89. Nishio K Nakai M Transfer of iron-sulfur cluster from NifU to apoferredoxin J Biol Chem 2000, 275(30):22615-22618. 10837463
90. Urbina HD Silberg JJ Hoff KG Vickery LE Transfer of sulfur from IscS to IscU during Fe/S cluster assembly J Biol Chem 2001, 276(48):44521-44526. 11577100
91. Bui BT Escalettes F Chottard G Florentin D Marquet A Enzyme-mediated sulfide production for the reconstitution of [2Fe-2S] clusters into apo-biotin synthase of Escherichia coli. Sulfide transfer from cysteine to biotin Eur J Biochem 2000, 267(9):2688-2694. 10785391
92. Bui BT Florentin D Fournier F Ploux O Mejean A Marquet A Biotin synthase mechanism: On the origin of sulphur FEBS Lett 1998, 440(1-2):226-230. 9862460
93. Yang W Rogers PA Ding H Repair of nitric oxide-modified ferredoxin [2Fe-2S] cluster by cysteine desulfurase (IscS) J Biol Chem 2002, 277(15):12868-12873. 11825893
94. Dutkiewicz R Marszalek J Schilke B Craig EA Lill R Muhlenhoff U The Hsp70 chaperone Ssq1p is dispensable for iron-sulfur cluster formation on the scaffold protein Isu1p J Biol Chem 2006, 281(12):7801-7808. 16431909
95. Chandramouli K Johnson MK HscA and HscB stimulate [2Fe-2S] cluster transfer from IscU to apoferredoxin in an ATP-dependent reaction Biochemistry 2006, 45(37):11087-11095. 16964969
96. Pellegrini M Thompson M Fierro J Bowers P Computational method to assign microbial genes to pathways J Cell Biochem Suppl 2001: Suppl 37 106-109. 11842435
97. McGinnis S Madden TL BLAST: At the core of a powerful and diverse set of sequence analysis tools Nucleic Acids Res 2004 32 Web Server W20-W25. 441573 15215342
98. Zheng Y Szustakowski JD Fortnow L Roberts RJ Kasif S Computational identification of operons in microbial genomes Genome Research 2002, 12(8):1221-1230. 186635 12176930
99. Wu J Mellor JC DeLisi C Deciphering protein network organization using phylogenetic profile groups Genome Inform 2005, 16(1):142-149. 16362916
100. Bader GD Betel D Hogue CW BIND: The Biomolecular Interaction Network Database Nucleic Acids Res 2003, 31(1):248-250. 165503 12519993
101. Deane CM Salwinski L Xenarios I Eisenberg D Protein interactions: Two methods for assessment of the reliability of high throughput observations Mol Cell Proteomics 2002, 1(5):349-356. 12118076
102. Salwinski L Miller CS Smith AJ Pettit FK Bowie JU Eisenberg D The Database of Interacting Proteins: 2004 update Nucleic Acids Res 2004 32 Database D449-D451. 308820 14681454
103. Xenarios I Salwinski L Duan XJ Higney P Kim SM Eisenberg D DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions Nucleic Acids Res 2002, 30(1):303-305. 99070 11752321
104. Breitkreutz BJ Stark C Tyers M The GRID: The General Repository for Interaction Datasets Genome Biol 2003, 4(3):R23. 153463 12620108
105. Stark C Breitkreutz BJ Reguly T Boucher L Breitkreutz A Tyers M BioGRID: a general repository for interaction datasets Nucleic Acids Res 2006 34 Database D535-D539. 1347471 16381927
106. Uetz P Pankratz MJ Protein interaction maps on the fly Nat Biotechnol 2004, 22(1):43-44. 14704704
107. Hazbun TR Fields S Networking proteins in yeast Proc Natl Acad Sci USA 2001, 98(8):4277-4278. 33318 11296274
108. Bates PA Kelley LA MacCallum RM Sternberg MJ Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM Proteins 2001 Suppl 5 39-46. 11835480
109. Bates PA Sternberg MJ Model building by comparison at CASP3: Using expert knowledge and computer automation Proteins 1999 Suppl 3 47-54. 10526351
110. Contreras-Moreira B Bates PA Domain fishing: A first step in protein comparative modelling Bioinformatics 2002, 18(8):1141-1142. 12176841
111. Contreras-Moreira B Fitzjohn PW Bates PA Comparative modelling: An essential methodology for protein structure prediction in the post-genomic era Appl Bioinformatics 2002, 1(4):177-190. 15130836
112. Contreras-Moreira B Fitzjohn PW Bates PA In silico protein recombination: Enhancing template and sequence alignment selection for comparative protein modelling J Mol Biol 2003, 328(3):593-608. 12706719
113. Contreras-Moreira B Fitzjohn PW Offman M Smith GR Bates PA Novel use of a genetic algorithm for protein structure prediction: Searching template and sequence alignment space Proteins 2003, 53(Suppl 6):424-429. 14579331
114. Contreras-Moreira B Jonsson PF Bates PA Structural context of exons in protein domains: Implications for protein modelling and design J Mol Biol 2003, 333(5):1045-1059. 14583198
115. Guex N Diemand A Peitsch MC Protein modelling for all Trends in Biochemical Sciences 1999, 24(9):364-367. 10470037
116. Guex N Peitsch MC SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling Electrophoresis 1997, 18(15):2714-2723. 9504803
117. Schwede T Diemand A Guex N Peitsch MC Protein structure computing in the genomic era Res Microbiol 2000, 151(2):107-112. 10865955
118. Schwede T Kopp J Guex N Peitsch MC SWISS-MODEL: An automated protein homology-modeling server Nucleic Acids Res 2003, 31(13):3381-3385. 168927 12824332
119. Bradley P Malmstrom L Qian B Schonbrun J Chivian D Kim DE Meiler J Misura KM Baker D Free modeling with Rosetta in CASP6 Proteins 2005, 61(Suppl 7):128-134. 16187354
120. Chivian D Kim DE Malmstrom L Bradley P Robertson T Murphy P Strauss CE Bonneau R Rohl CA Baker D Automated prediction of CASP-5 structures using the Robetta server Proteins 2003, 53(Suppl 6):524-533. 14579342
121. Chivian D Kim DE Malmstrom L Schonbrun J Rohl CA Baker D Prediction of CASP6 structures using automated Robetta protocols Proteins 2005, 61(Suppl 7):157-166. 16187358
122. Kim DE Chivian D Baker D Protein structure prediction and analysis using the Robetta server Nucleic Acids Res 2004 32 Web Server W526-W531. 441606 15215442
123. Misura KM Chivian D Rohl CA Kim DE Baker D Physically realistic homology models built with ROSETTA can be more accurate than their templates Proc Natl Acad Sci USA 2006, 103(14):5361-5366. 1459360 16567638
124. Weiner B Deumens E Ohrn Y Coherent-State Approach to Electron-Nuclear Dynamics with an Antisymmetrized Geminal Power State Journal of Mathematical Physics 1994, 35(3):1139-1170.
125. Voisine C Cheng YC Ohlson M Schilke B Hoff K Beinert H Marszalek J Craig EA Jac1, a mitochondrial J-type chaperone, is involved in the biogenesis of Fe/S clusters in Saccharomyces cerevisiae Proc Natl Acad Sci USA 2001, 98(4):1483-1488. 29283 11171977
126. Lutz T Westermann B Neupert W Herrmann JM The mitochondrial proteins Ssq1 and Jac1 are required for the assembly of iron sulfur clusters in mitochondria J Mol Biol 2001, 307(3):815-825. 11273703
127. Duby G Foury F Ramazzotti A Herrmann J Lutz T A non-essential function for yeast frataxin in iron-sulfur cluster assembly Hum Mol Genet 2002, 11(21):2635-2643. 12354789
128. Muhlenhoff U Richhardt N Ristow M Kispal G Lill R The yeast frataxin homolog Yfh1p plays a specific role in the maturation of cellular Fe/S proteins Hum Mol Genet 2002, 11(17):2025-2036. 12165564