Computational method to assign microbial genes to pathways

Journal of Cellular Biochemistry

Volumn 84, Issue SUPPL. 37, 2001, Pages 106-109

  Pellegrini, Matteo ^a   Thompson, Michael ^a   Fierro, Joseph ^a   Bowers, Peter ^a  

^a NONE   (United States)

Author keywords

Comparative genomics; Functional genomics; Pathways; Phylogenetic analysis

Indexed keywords

ALGORITHM; CONFERENCE PAPER; GENE ASSIGNMENT; GENE SEQUENCE; GENETIC ANALYSIS; GENOMICS; METHODOLOGY; MICROBIAL GENETICS; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; BACTERIAL GENE; BIOLOGY; FUNGAL GENE; METABOLISM; PHYSIOLOGY; REVIEW;

PROTEIN;

COMPUTATIONAL BIOLOGY; GENES, BACTERIAL; GENES, FUNGAL; METABOLISM; PHYLOGENY; PROTEINS;

EID: 0036160526     PISSN: 07302312     EISSN: None     Source Type: Journal    
DOI: 10.1002/jcb.10071     Document Type: Conference Paper

References (10)

1. Conservation of gene order: A fingerprint of proteins that physically interact
2. Protein interaction maps for complete genomes based on gene fusion events
3. Measuring genome evolution
4. Predicting protein function by genomic context: Quantitative evaluation and qualitative inferences
5. Detecting protein function and protein-protein interactions from genome sequences
6. A combined algorithm for genome-wide prediction of protein function
7. Use of contiguity on the chromosome to predict functional coupling
8. The use of gene clusters to infer functional coupling
9. Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
10. A genomic perspective on protein families