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Volumn 29, Issue SUPPL. 1, 1997, Pages 226-230

Evaluation of GRAMM low-resolution docking methodology on the hemagglutinin-antibody complex

Author keywords

Antigen prediction; CASP2; Conformational changes; Molecular recognition; Protein structure modeling

Indexed keywords

ANTIBODY; VIRUS HEMAGGLUTININ; INFLUENZA VIRUS HEMAGGLUTININ; VIRUS ANTIBODY;

EID: 0031296607     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0134(1997)1+<226::AID-PROT31>3.0.CO;2-O     Document Type: Article
Times cited : (104)

References (22)
  • 1
    • 0029421048 scopus 로고
    • Protein-protein recognition
    • Janin, J. Protein-protein recognition. Prog. Biophys. Mol. Biol. 64:145-166, 1995.
    • (1995) Prog. Biophys. Mol. Biol. , vol.64 , pp. 145-166
    • Janin, J.1
  • 2
    • 0029988383 scopus 로고    scopus 로고
    • Protein-protein interfaces: Architectures and interactions in protein-protein interfaces and in protein cores. Their similarities and differences
    • Tsai, C-J., Lin, S.L., Wolfson, H.J., Nussinov, R. Protein-protein interfaces: Architectures and interactions in protein-protein interfaces and in protein cores. Their similarities and differences. Crit. Rev. Biochem. Mol. Biol. 31:127-152, 1996.
    • (1996) Crit. Rev. Biochem. Mol. Biol. , vol.31 , pp. 127-152
    • Tsai, C.-J.1    Lin, S.L.2    Wolfson, H.J.3    Nussinov, R.4
  • 6
    • 0029935202 scopus 로고    scopus 로고
    • The automatic search for ligand binding sites in proteins of known three-dimensional structure using only geometric criteria
    • Peters, K.P., Fauck, J., Frommel, C. The automatic search for ligand binding sites in proteins of known three-dimensional structure using only geometric criteria. J. Mol. Biol. 256:201-213, 1996.
    • (1996) J. Mol. Biol. , vol.256 , pp. 201-213
    • Peters, K.P.1    Fauck, J.2    Frommel, C.3
  • 7
    • 0025656474 scopus 로고
    • Cavity search: An algorithm for the isolation and display of cavity-like binding regions
    • Ho, C.M.W., Marshall, G.R. Cavity search: An algorithm for the isolation and display of cavity-like binding regions. J. Comput. Aided Mol. Des. 4:337-354, 1990.
    • (1990) J. Comput. Aided Mol. Des. , vol.4 , pp. 337-354
    • Ho, C.M.W.1    Marshall, G.R.2
  • 8
    • 0027551946 scopus 로고
    • Approximation and characterization of molecular surfaces
    • Duncan, B.S., Olson, A.J. Approximation and characterization of molecular surfaces. Biopolymers 33:219-229, 1993.
    • (1993) Biopolymers , vol.33 , pp. 219-229
    • Duncan, B.S.1    Olson, A.J.2
  • 9
    • 0028984540 scopus 로고
    • Protein docking for low-resolution structures
    • Vakser, I.A. Protein docking for low-resolution structures. Protein Eng. 8:371-377, 1995.
    • (1995) Protein Eng. , vol.8 , pp. 371-377
    • Vakser, I.A.1
  • 10
    • 0001921291 scopus 로고
    • Protein docking in the absence of detailed molecular structures
    • Atassi, M.Z., Appella, E., (eds.). New York: Plenum Press
    • Vakser, I.A., Nikiforovich, G.V. Protein docking in the absence of detailed molecular structures. In: "Methods in Protein Structure Analysis." Atassi, M.Z., Appella, E., (eds.). New York: Plenum Press, 1995:505-514.
    • (1995) Methods in Protein Structure Analysis , pp. 505-514
    • Vakser, I.A.1    Nikiforovich, G.V.2
  • 11
    • 0030248996 scopus 로고    scopus 로고
    • Low-resolution docking: Prediction of complexes for underdetermined structures
    • Vakser, I.A. Low-resolution docking: Prediction of complexes for underdetermined structures. Biopolymers 39: 455-464, 1996.
    • (1996) Biopolymers , vol.39 , pp. 455-464
    • Vakser, I.A.1
  • 12
    • 0029822166 scopus 로고    scopus 로고
    • Main-chain complementarity in protein-protein recognition
    • Vakser, I.A. Main-chain complementarity in protein-protein recognition. Protein Eng. 9:741-744, 1996.
    • (1996) Protein Eng. , vol.9 , pp. 741-744
    • Vakser, I.A.1
  • 13
    • 0029876191 scopus 로고    scopus 로고
    • Long-distance potentials: An approach to the multiple-minima problem in ligand-receptor interaction
    • Vakser, I.A. Long-distance potentials: An approach to the multiple-minima problem in ligand-receptor interaction. Protein Eng. 9:37-41, 1996.
    • (1996) Protein Eng. , vol.9 , pp. 37-41
    • Vakser, I.A.1
  • 14
    • 0031025430 scopus 로고    scopus 로고
    • Into the black of night
    • Eisenberg, D. Into the black of night. Nat. Struct. Biol. 4:95-97, 1997.
    • (1997) Nat. Struct. Biol. , vol.4 , pp. 95-97
    • Eisenberg, D.1
  • 15
    • 0027772959 scopus 로고
    • Shape complementarity at protein/protein interfaces
    • Lawrence, M.C., Colman, P.M. Shape complementarity at protein/protein interfaces. J. Mol. Biol. 234:946-950, 1993.
    • (1993) J. Mol. Biol. , vol.234 , pp. 946-950
    • Lawrence, M.C.1    Colman, P.M.2
  • 16
  • 17
    • 0028575449 scopus 로고
    • Hydrophobic docking: A proposed enhancement to molecular recognition techniques
    • Vakser, I.A., Aflalo, C. Hydrophobic docking: A proposed enhancement to molecular recognition techniques. Proteins 20:320-329, 1994.
    • (1994) Proteins , vol.20 , pp. 320-329
    • Vakser, I.A.1    Aflalo, C.2
  • 18
    • 0028853544 scopus 로고
    • Principles of protein-protein recognition from structure to thermodynamics
    • Janin, J. Principles of protein-protein recognition from structure to thermodynamics. Biochimie 77:497-505, 1995.
    • (1995) Biochimie , vol.77 , pp. 497-505
    • Janin, J.1
  • 22
    • 0031307203 scopus 로고    scopus 로고
    • Evaluation of the CASP2 docking section
    • Dixon, J.S. Evaluation of the CASP2 docking section. Proteins Suppl. 1:198-204, 1997.
    • (1997) Proteins Suppl. , vol.1 , pp. 198-204
    • Dixon, J.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.