SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling

Electrophoresis

Volumn 18, Issue 15, 1997, Pages 2714-2723

  Guex, Nicolas ^a   Peitsch, Manuel C ^a  

^a GLAXOSMITHKLINE   (United States)

Author keywords

Database; Protein modeling; Protein structure

Indexed keywords

PROTEIN;

ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; DATA BASE; GENETIC PROCEDURES; MOLECULAR MODEL; MUTAGENESIS; NONHUMAN; PROTEIN ANALYSIS; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE, FUNCTION AND VARIABILITY; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; AUTOMATION; DATABASES, FACTUAL; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; REPRODUCIBILITY OF RESULTS; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 0031473847     PISSN: 01730835     EISSN: None     Source Type: Journal    
DOI: 10.1002/elps.1150181505     Document Type: Article

References (33)

1. Bairoch, A., Apweiler, R., Nucleic Acids Res. 1996, 24, 21-25.
2. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F., Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T., Tasumi, M., J. Mol. Biol. 1977, 112, 535-542.
3. Peitsch, M. C., Bio/Technology 1995, 13, 658-660.
4. Peitsch, M. C., Biochem. Soc. Trans. 1996, 24, 274-279.
5. Peitsch, M. C., Wilkins, M. R., Tonella, L., Sanchez, J.-C., Appel, R. D., Hochstrasser, D. F., Electrophoresis 1997, 18, 498-501.
6. Chothia, C., Lesk, A. M., EMBO J. 1986, 5, 823-826.
7. Bajorath, J., Stenkamp, R., Aruffo, A., Prot. Sci. 1993, 2, 1798-1810.
8. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., Lipman, D. J., J. Mol. Biol. 1990, 215, 403-410.
9. Pearson, W. R., Lipman, D. J., Proc. Natl. Acad. Sci. USA 1988, 85, 2444-2448.
10. Huang, X., Miller, M., Adv. Appl. Math. 1991, 12, 337-357.
11. Blundell, T., Sibanda, B. L., Sternberg, M. J., Thornton, J. M., Nature 1987, 326, 347-352.
12. Jones, D. T., Thirup, S., EMBO J. 1986, 5, 819-822.
13. Greer, J., Proteins Struct. Funct. Genet. 1990, 7, 317-334.
14. Ponder, J. W., Richards, F. M., J. Mol. Biol. 1987, 193, 775-785.
15. Lüthy, R., Bowie, J. U., Eisenberg, D., Nature 1992, 356, 83-85.
16. Sippl, M. J., Proteins Struct. Funct. Genet. 1993, 17, 355-362.
17. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., Karplus, M., J. Comp. Chem. 1983, 4, 187-217.
18. Peitsch, M. C., Herzyk, P., Wells, T. N. C., Hubbard, R. E., Receptors Channels 1996, 4, 161-164.
19. Herzyk, P., Hubbard, R. E., Biophys J. 1995, 69, 2419-2442.
20. Guex, N., Peitsch, M. C., Protein Data Bank Quarterly Newsletter 1996, 77, 7.
21. Weiner, S. J., Kollman, P. A., Case, D. A., Singh, U. C., Ghio, C., Alagona, G., Profeta, S., Weiner, P. K., J. Am. Chem. Soc. 1984, 106, 765-784.
22. Morris, A. L., MacArthur, M. W., Hutchinson, E. G., Thornton, J. M., Proteins Struct. Funct. Genet. 1992, 12, 345-364.
23. IUPAC-IUB Commission on Biochemical Nomenclature, J. Mol. Biol. 1970, 52, 1-17.
24. Appel, R. D., Bairoch, A., Hochstrasser, D. F., Trends Biochem. Sci. 1994, 19, 258-260.
25. Birktoft, J. J., Rhodes, G., Banaszak, L. J., Biochemistry 1989, 28, 6065-6081.
26. Kelly, C. A., Nishiyama, M., Ohnishi, Y., Beppu, T., Birktoft, J. J., Biochemistry 1993, 32, 3913-3922.
27. Wilks, H. M., Hart, K. W., Feeney, R., Dunn, C. R., Muirhead, H., Chia, W. N., Barstow, D. A., Atkinson, T., Clarke, A. R., Holbrook, J. J., Science 1988, 242, 1541-1544.
28. Birktoft, J. J., Carnhagan, G. E., Rhodes, G., Roderick, S. L., Banaszak, L. J., Biochem. Soc. Trans. 1989, 17, 301-304.
29. Guex, N., Widmer, F., Gaillard, P., Carrupt, P.-A., Testa, B., in: Trends in QSAR Mol. modelling 1993, 9, 485-486.
30. Gleason, W. B., Fu, Z., Birktoft, J. J., Banaszak, L., Biochemistry 1994, 33, 2078-2088.
31. White, J. L., Hackert, M. L., Buehner, M., Adams, M. K., Ford, G. C., Lentz, P. J., Smiley, I. E., Steindel, S. J., Rossmann, M. G., J. Mol. Biol. 1976, 102, 759-779.
32. Tilton, R. F., Dewan, J. C., Petsko, G. A., Biochemistry 1992, 31, 2469-2481.
33. Harrison, R. W., Chatterjee, D., Weber, I. T., Proteins Struct. Func. Genet. 1995, 23, 463-471.