메뉴 건너뛰기




Volumn 57, Issue 4, 2005, Pages 461-485

Linkage disequilibrium and association studies in higher plants: Present status and future prospects

Author keywords

Association mapping; Linkage disequilibrium (LD); Plants; Population genetics; QTL

Indexed keywords

ASSOCIATION REACTIONS; BIOMARKERS; COMPUTER SOFTWARE; DNA; GENES; MOLECULAR BIOLOGY;

EID: 17844404294     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-005-0257-z     Document Type: Review
Times cited : (519)

References (166)
  • 2
    • 0035151437 scopus 로고    scopus 로고
    • Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana
    • M. Aguade 2001 Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana Mol. Biol. Evol. 18 1 9
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1-9
    • Aguade, M.1
  • 3
    • 0037323729 scopus 로고    scopus 로고
    • The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibrium
    • J.M. Akey K. Zhang M. Xiong L. Jin 2003 The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibrium Mol. Biol. Evol. 20 232 242
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 232-242
    • Akey, J.M.1    Zhang, K.2    Xiong, M.3    Jin, L.4
  • 4
    • 0036911353 scopus 로고    scopus 로고
    • Interrogating a high-density SNP map for signatures of natural selection
    • J.M. Akey G. Zhang K. Zhang L. Jin M.D. Shriver 2002 Interrogating a high-density SNP map for signatures of natural selection Genome Res. 12 1805 1814
    • (2002) Genome Res. , vol.12 , pp. 1805-1814
    • Akey, J.M.1    Zhang, G.2    Zhang, K.3    Jin, L.4    Shriver, M.D.5
  • 5
    • 0031028361 scopus 로고    scopus 로고
    • Transmission disequilibrium tests for quantitative traits
    • D.B. Allison 1997 Transmission disequilibrium tests for quantitative traits Am. J. Hum. Genet. 60 676 690
    • (1997) Am. J. Hum. Genet. , vol.60 , pp. 676-690
    • Allison, D.B.1
  • 6
    • 0030479076 scopus 로고    scopus 로고
    • High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative locus in tomato
    • K.B. Alpert S.D. Tanksley 1996 High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative locus in tomato Proc. Natl. Acad. Sci. USA 93 15503 15507
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 15503-15507
    • Alpert, K.B.1    Tanksley, S.D.2
  • 8
    • 0036208832 scopus 로고    scopus 로고
    • Patterns of linkage disequilibrium in the human genome
    • K.G. Ardlie L. Kruglyak M. Seielstad 2002 Patterns of linkage disequilibrium in the human genome Nat. Rev. Genet. 3 299 309
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 299-309
    • Ardlie, K.G.1    Kruglyak, L.2    Seielstad, M.3
  • 9
    • 17844381509 scopus 로고    scopus 로고
    • Association between molecular markers and qualitative traits in an oat germplasm pool: Can we infer linkages?
    • e# 1
    • Beer S.C., Siripoonwiwat W., O'Donoughue L.S., Souza E., Matthews D., Sorrells M.E. (1998). Association between molecular markers and qualitative traits in an oat germplasm pool: Can we infer linkages? J. Agric. Genomics e# 1 http://www.ncgri.org/ag/jag/Index.html
    • (1998) J. Agric. Genomics
    • Beer, S.C.1    Siripoonwiwat, W.2    O'Donoughue, L.S.3    Souza, E.4    Matthews, D.5    Sorrells, M.E.6
  • 10
    • 17844403678 scopus 로고
    • Genetic variation of RAPD markers in a Norway spruce Picea abies Karst. population
    • January, 1995, Town & Country Conference Center, San Diego, CA
    • Bucci G., Menozzi P. (1995). Genetic variation of RAPD markers in a Norway spruce Picea abies Karst. population. In: Plant Genome III Conference, January, 1995, Town & Country Conference Center, San Diego, CA
    • (1995) Plant Genome III Conference
    • Bucci, G.1    Menozzi, P.2
  • 11
  • 12
    • 0035257236 scopus 로고    scopus 로고
    • Association study designs for complex diseases
    • L.R. Cardon J.I. Bell 2001 Association study designs for complex diseases Nature Rev. Genet. 2 91 99
    • (2001) Nature Rev. Genet. , vol.2 , pp. 91-99
    • Cardon, L.R.1    Bell, J.I.2
  • 13
    • 3442894519 scopus 로고    scopus 로고
    • Epistasis: Too often neglected in complex trait studies
    • O. Carlborg C.S. Haley 2004 Epistasis: too often neglected in complex trait studies Nature Rev. Genet. 5 618 625
    • (2004) Nature Rev. Genet. , vol.5 , pp. 618-625
    • Carlborg, O.1    Haley, C.S.2
  • 15
    • 0025269067 scopus 로고
    • Inference of haplotypes from PCR-amplified samples of diploid populations
    • A.G. Clark 1990 Inference of haplotypes from PCR-amplified samples of diploid populations Mol. Biol. Evol. 7 111 122
    • (1990) Mol. Biol. Evol. , vol.7 , pp. 111-122
    • Clark, A.G.1
  • 16
    • 0038392950 scopus 로고    scopus 로고
    • Finding genes underlying risk of complex disease by linkage disequilibrium
    • A.G. Clark 2003 Finding genes underlying risk of complex disease by linkage disequilibrium Curr. Opin. Genet. Develop. 13 296 302
    • (2003) Curr. Opin. Genet. Develop. , vol.13 , pp. 296-302
    • Clark, A.G.1
  • 17
    • 1642514950 scopus 로고    scopus 로고
    • Patterns of diversity in the genomic region near the maize domestication gene tb1
    • R.M. Clark E. Linton J. Messing J.F. Doebley 2004 Patterns of diversity in the genomic region near the maize domestication gene tb1 Proc. Natl. Acad. Sci. USA 101 700 707
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 700-707
    • Clark, R.M.1    Linton, E.2    Messing, J.3    Doebley, J.F.4
  • 18
    • 17844364145 scopus 로고    scopus 로고
    • Linkage disequilibrium and rice synteny near the barley ROR1 and ROR2 genes
    • 12-16 January, Town & Country Convention Center, San Diego, CA
    • Collins N.C., Lahaye T., Schulze-Lefert P. (2002). Linkage disequilibrium and rice synteny near the barley ROR1 and ROR2 genes. In: Plant, Animal & Microbe Genome X Conference, 12-16 January, Town & Country Convention Center, San Diego, CA
    • (2002) Plant, Animal & Microbe Genome X Conference
    • Collins, N.C.1    Lahaye, T.2    Schulze-Lefert, P.3
  • 20
    • 1642306204 scopus 로고    scopus 로고
    • Properties of the Multiallelic Trend Test
    • W. Czika B.S. Weir 2004 Properties of the Multiallelic Trend Test Biometrics 60 69 74
    • (2004) Biometrics , vol.60 , pp. 69-74
    • Czika, W.1    Weir, B.S.2
  • 21
    • 0027278088 scopus 로고
    • Detecting marker QTL linkage and estimating QTL gene effect and map location using a saturated genetic map
    • A. Darvasi A. Weintreb V. Minke S. Weller M. Soller 1993 Detecting marker QTL linkage and estimating QTL gene effect and map location using a saturated genetic map Genetics 134 943 951
    • (1993) Genetics , vol.134 , pp. 943-951
    • Darvasi, A.1    Weintreb, A.2    Minke, V.3    Weller, S.4    Soller, M.5
  • 22
    • 0034143556 scopus 로고    scopus 로고
    • The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritime L.: The usefulness of both genomes for population genetics studies
    • B. Desplanque F. Viard J. Bernard D. Forcioli P. Saumitou-Laprade J. Cuguen H. Van Dijk 2000 The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritime L.: The usefulness of both genomes for population genetics studies Mol. Ecol. 9 141 154
    • (2000) Mol. Ecol. , vol.9 , pp. 141-154
    • Desplanque, B.1    Viard, F.2    Bernard, J.3    Forcioli, D.4    Saumitou-Laprade, P.5    Cuguen, J.6    Van Dijk, H.7
  • 23
    • 17844393580 scopus 로고    scopus 로고
    • Linkage disequilibrium in sorghum
    • 10-14 January, Town & Country Convention Center, San Diego, CA
    • Deu M., Glaszmann J.C. (2004). Linkage disequilibrium in sorghum. In: Plant & Animal Genomes XII Conference, 10-14 January, Town & Country Convention Center, San Diego, CA, W10
    • (2004) Plant & Animal Genomes XII Conference
    • Deu, M.1    Glaszmann, J.C.2
  • 24
    • 0030586840 scopus 로고    scopus 로고
    • Disequilibrium mapping: Composite likelihood for pairwise disequilibrium
    • B. Devlin N. Risch K. Roeder 1996 Disequilibrium mapping: Composite likelihood for pairwise disequilibrium Genomics 36 1 16
    • (1996) Genomics , vol.36 , pp. 1-16
    • Devlin, B.1    Risch, N.2    Roeder, K.3
  • 25
    • 0036149896 scopus 로고    scopus 로고
    • Low nucleotide diversity at the pal1locus in the widely distributed Pinus sylvestris
    • V. Dvornyk A. Sirviö M. Mikkonen O. Savolainen 2002 Low nucleotide diversity at the pal1locus in the widely distributed Pinus sylvestris Mol. Biol. Evol. 19 179 188
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 179-188
    • Dvornyk, V.1    Sirviö, A.2    Mikkonen, M.3    Savolainen, O.4
  • 26
    • 0033918564 scopus 로고    scopus 로고
    • The genetically isolated populations of Finland and sardinia may not be a panacea for linkage disequilibrium mapping of common disease genes
    • I.A. Eaves T.R. Merriman R.A. Barber S. Nutland E. Tuomilehto-Wolf J. Tuomilehto F. Cucca J.A. Todd 2000 The genetically isolated populations of Finland and sardinia may not be a panacea for linkage disequilibrium mapping of common disease genes Nat. Genet. 25 320 323
    • (2000) Nat. Genet. , vol.25 , pp. 320-323
    • Eaves, I.A.1    Merriman, T.R.2    Barber, R.A.3    Nutland, S.4    Tuomilehto-Wolf, E.5    Tuomilehto, J.6    Cucca, F.7    Todd, J.A.8
  • 27
    • 0036259653 scopus 로고    scopus 로고
    • Simultaneous mining of linkage and linkage disequilibrium to fine map quantitative trait loci in outbred half-sib pedigrees: Revisiting the location of a quantitative trait locus with major effect on milk production on bovine chromosome 14
    • F. Farnir B. Grisart W. Coppieters J. Riquet P. Berzi N. Cambisano L. Karim M. Mni S. Moisio P. Simon D. Wagenaar J. Vilkki M. Georges 2002 Simultaneous mining of linkage and linkage disequilibrium to fine map quantitative trait loci in outbred half-sib pedigrees: revisiting the location of a quantitative trait locus with major effect on milk production on bovine chromosome 14 Genetics 161 275 287
    • (2002) Genetics , vol.161 , pp. 275-287
    • Farnir, F.1    Grisart, B.2    Coppieters, W.3    Riquet, J.4    Berzi, P.5    Cambisano, N.6    Karim, L.7    Mni, M.8    Moisio, S.9    Simon, P.10    Wagenaar, D.11    Vilkki, J.12    Georges, M.13
  • 28
    • 0002033443 scopus 로고
    • The logic of inductive inference
    • R.A. Fisher 1935 The logic of inductive inference J. R. Stat. Soc. Ser. A. 98 39 54
    • (1935) J. R. Stat. Soc. Ser. A. , vol.98 , pp. 39-54
    • Fisher, R.A.1
  • 30
    • 17844390851 scopus 로고    scopus 로고
    • DNA sequence polymorphism, linkage disequilibrium and haplotype structure in candidate genes of wood quality traits in maritime pine Pinus pinaster Ait
    • 11-15 January, Town & Country Convention Center, San Diego, CA
    • Garnier-Géré P., Bedon F., Pot D., Austerlitz F., léger P., Kremer A., Plomion C. (2003). DNA sequence polymorphism, linkage disequilibrium and haplotype structure in candidate genes of wood quality traits in maritime pine Pinus pinaster Ait. In: Plant & Animal Genomes XI Conference, 11-15 January, Town & Country Convention Center, San Diego, CA, P241
    • (2003) Plant & Animal Genomes XI Conference
    • Garnier-Géré, P.1    Bedon, F.2    Pot, D.3    Austerlitz, F.4    Léger, P.5    Kremer, A.6    Plomion, C.7
  • 31
    • 0242286593 scopus 로고    scopus 로고
    • Population structure and its effects on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice Oryza sativa L
    • A.J. Garris S.R. McCouch S. Kresovich 2003 Population structure and its effects on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice Oryza sativa L Genetics 165 759 769
    • (2003) Genetics , vol.165 , pp. 759-769
    • Garris, A.J.1    McCouch, S.R.2    Kresovich, S.3
  • 32
    • 0037705665 scopus 로고    scopus 로고
    • The lowdown on linkage disequilibrium
    • B.S. Gaut A.D. Long 2003 The lowdown on linkage disequilibrium Plant Cell 15 1502 1506
    • (2003) Plant Cell , vol.15 , pp. 1502-1506
    • Gaut, B.S.1    Long, A.D.2
  • 33
    • 1242265516 scopus 로고    scopus 로고
    • Assessing genetic potential in germplasm collections of crop plants by marker-trait association: A case study for potatoes with quantitative variation of resistance to late blight and maturity type
    • C. Gebhardt A. Ballvora B. Walkemeier P. Oberhagemann K. Schüler 2004 Assessing genetic potential in germplasm collections of crop plants by marker-trait association: a case study for potatoes with quantitative variation of resistance to late blight and maturity type Mol. Breed. 13 93 102
    • (2004) Mol. Breed. , vol.13 , pp. 93-102
    • Gebhardt, C.1    Ballvora, A.2    Walkemeier, B.3    Oberhagemann, P.4    Schüler, K.5
  • 34
    • 17844392273 scopus 로고    scopus 로고
    • Genetic variation of Norway spruce Picea abies [l.] Karst. populations in austria I. Digenic disequilibrium and microspatial patterns derived from allozymes
    • Geburek T. (1998). Genetic variation of Norway spruce Picea abies [l.] Karst. populations in austria I. Digenic disequilibrium and microspatial patterns derived from allozymes. Forest Genet. 5 http://www.tuzvo.sk/∼paule/ webdoc2.htm
    • (1998) Forest Genet. , vol.5
    • Geburek, T.1
  • 35
    • 0003143606 scopus 로고
    • On the probability theory of linkage in Mendelian heredity
    • H. Geiringer 1944 On the probability theory of linkage in Mendelian heredity Ann. Math. Stat. 15 25 57
    • (1944) Ann. Math. Stat. , vol.15 , pp. 25-57
    • Geiringer, H.1
  • 36
    • 17844393039 scopus 로고
    • Linkage disequilibrium between Est-2 and Amp-3 in rice varieties
    • Glaszmann J.C. (1986). Linkage disequilibrium between Est-2 and Amp-3 in rice varieties. Rice Genet. Newslet. 3
    • (1986) Rice Genet. Newslet. , vol.3
    • Glaszmann, J.C.1
  • 37
    • 0037146578 scopus 로고    scopus 로고
    • Finding genes that underlie complex traits
    • A.M. Glazier J.H. Nadeau T.J. Aitman 2002 Finding genes that underlie complex traits Science 298 2345 2349
    • (2002) Science , vol.298 , pp. 2345-2349
    • Glazier, A.M.1    Nadeau, J.H.2    Aitman, T.J.3
  • 38
    • 0242380286 scopus 로고    scopus 로고
    • Genome scans and candidate gene approaches in the study of common diseases and variable drug responses
    • D.B. Goldstein K.I. Ahmadi M.E. Weale N.W. Wood 2003 Genome scans and candidate gene approaches in the study of common diseases and variable drug responses Trends Genet. 19 615 622
    • (2003) Trends Genet. , vol.19 , pp. 615-622
    • Goldstein, D.B.1    Ahmadi, K.I.2    Weale, M.E.3    Wood, N.W.4
  • 40
    • 1942421686 scopus 로고    scopus 로고
    • Decomposing multilocus linkage disequilibrium
    • R. Gorelick M.D. Laubichler 2004 Decomposing multilocus linkage disequilibrium Genetics 166 1581 1583
    • (2004) Genetics , vol.166 , pp. 1581-1583
    • Gorelick, R.1    Laubichler, M.D.2
  • 41
    • 16344396626 scopus 로고    scopus 로고
    • Molecular markers from the transcribed/expressed region of the genome in higher plants
    • P.K. Gupta S. Rustgi 2004 Molecular markers from the transcribed/ expressed region of the genome in higher plants Funct. Integr. Genomics 4 137 162
    • (2004) Funct. Integr. Genomics , vol.4 , pp. 137-162
    • Gupta, P.K.1    Rustgi, S.2
  • 42
    • 0036010775 scopus 로고    scopus 로고
    • Statistical methods of QTL mapping in cereals
    • C.A. Hackett 2002 Statistical methods of QTL mapping in cereals Plant Mol. Biol. 48 585 599
    • (2002) Plant Mol. Biol. , vol.48 , pp. 585-599
    • Hackett, C.A.1
  • 43
    • 0036263045 scopus 로고    scopus 로고
    • Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana
    • J. Hagenblad M. Nordborg 2002 Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana Genetics 161 289 298
    • (2002) Genetics , vol.161 , pp. 289-298
    • Hagenblad, J.1    Nordborg, M.2
  • 45
    • 1842465830 scopus 로고    scopus 로고
    • Comparative population genetics of the panicoid grasses: Sequence polymorphism, linkage disequilibrium and selection in a diverse sample of Sorghum bicolor
    • M.T. Hamblin S.E. Mitchell G.M. White J. Gallego R. Kukatla R.A. Wing A.H. Paterson S. Kresovich 2004 Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of Sorghum bicolor Genetics 167 471 483
    • (2004) Genetics , vol.167 , pp. 471-483
    • Hamblin, M.T.1    Mitchell, S.E.2    White, G.M.3    Gallego, J.4    Kukatla, R.5    Wing, R.A.6    Paterson, A.H.7    Kresovich, S.8
  • 46
    • 0028151259 scopus 로고
    • Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: Roles for balancing and directional selection
    • U. Hanfstingl A. Berry E. Kellogg J.T. Costa III W. Rudiger F.M. Ausubel 1994 Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for balancing and directional selection Genetics 138 811 828
    • (1994) Genetics , vol.138 , pp. 811-828
    • Hanfstingl, U.1    Berry, A.2    Kellogg, E.3    Costa III, J.T.4    Rudiger, W.5    Ausubel, F.M.6
  • 47
    • 0035099278 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of the bolting gene in sea beet using AFLP markers
    • M. Hansen T. Kraft S. Ganestam T. Sall N.-o. Nilsson 2001 Linkage disequilibrium mapping of the bolting gene in sea beet using AFLP markers Genet. Res. 77 61 66
    • (2001) Genet. Res. , vol.77 , pp. 61-66
    • Hansen, M.1    Kraft, T.2    Ganestam, S.3    Sall, T.4    Nilssen, N.-O.5
  • 49
    • 0036021403 scopus 로고    scopus 로고
    • Recombination and gene conversion in a 170-kb genomic region of Arabidopsis thaliana
    • B. Haubold J. Kroymann A. Ratzka T. Mitchell-Olds T. Wiehe 2002 Recombination and gene conversion in a 170-kb genomic region of Arabidopsis thaliana Genetics 161 1269 1278
    • (2002) Genetics , vol.161 , pp. 1269-1278
    • Haubold, B.1    Kroymann, J.2    Ratzka, A.3    Mitchell-Olds, T.4    Wiehe, T.5
  • 50
    • 0023430504 scopus 로고
    • Gametic disequilibrium measures: Proceed with caution
    • P.W. Hedrick 1987 Gametic disequilibrium measures: proceed with caution Genetics 117 331 341
    • (1987) Genetics , vol.117 , pp. 331-341
    • Hedrick, P.W.1
  • 51
    • 17844378919 scopus 로고    scopus 로고
    • Linkage disequilibrium in four soybean populations
    • 10-14 January, Town & Country Convention Center, San Diego, CA
    • Hyten D.L., Song Q., Cregan P.B. (2004). Linkage disequilibrium in four soybean populations. In: Plant &Animal Genomes XII Conference, 10-14 January, Town & Country Convention Center, San Diego, CA, P534
    • (2004) Plant &Animal Genomes XII Conference
    • Hyten, D.L.1    Song, Q.2    Cregan, P.B.3
  • 52
    • 0029796494 scopus 로고    scopus 로고
    • Intragenic recombination in the Adh locus of the wild plant Arabidopsis thaliana
    • H. Innan F. Tajima R. Terauchi N.T. Miyashita 1996 Intragenic recombination in the Adh locus of the wild plant Arabidopsis thaliana Genetics 143 1761 1770
    • (1996) Genetics , vol.143 , pp. 1761-1770
    • Innan, H.1    Tajima, F.2    Terauchi, R.3    Miyashita, N.T.4
  • 53
    • 0033011909 scopus 로고    scopus 로고
    • A method for estimating nucleotide diversity from AFLP data
    • H. Innan R. Terauchi G. Kahl F. Tajima 1999 A method for estimating nucleotide diversity from AFLP data Genetics 151 1157 1164
    • (1999) Genetics , vol.151 , pp. 1157-1164
    • Innan, H.1    Terauchi, R.2    Kahl, G.3    Tajima, F.4
  • 54
    • 0030803875 scopus 로고    scopus 로고
    • Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana
    • H. Innan R. Terauchi N.T. Miyashita 1997 Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana Genetics 146 1441 1452
    • (1997) Genetics , vol.146 , pp. 1441-1452
    • Innan, H.1    Terauchi, R.2    Miyashita, N.T.3
  • 55
    • 0036010773 scopus 로고    scopus 로고
    • Analysis of simple sequence repeat (SSRs) in wild barley from the Fertile Crescent: Associations with ecology, geography and flowering time
    • V.C. Ivandic A. Hackett E. Nevo R. Keith W.T.B. Thomas B.P. Foster 2002 Analysis of simple sequence repeat (SSRs) in wild barley from the Fertile Crescent: associations with ecology, geography and flowering time Plant Mol. Biol. 48 511 527
    • (2002) Plant Mol. Biol. , vol.48 , pp. 511-527
    • Ivandic, V.C.1    Hackett, A.2    Nevo, E.3    Keith, R.4    Thomas, W.T.B.5    Foster, B.P.6
  • 60
    • 0029022716 scopus 로고
    • Multiple trait analysis for genetic mapping of quantitative trait loci
    • C. Jiang Z.-B. Zeng 1995 Multiple trait analysis for genetic mapping of quantitative trait loci Genetics 140 1111 1127
    • (1995) Genetics , vol.140 , pp. 1111-1127
    • Jiang, C.1    Zeng, Z.-B.2
  • 62
    • 0033786787 scopus 로고    scopus 로고
    • Linkage disequilibrium and the search for complex disease gene
    • J.B. Jorde 2000 Linkage disequilibrium and the search for complex disease gene Genome Res. 10 1435 1444
    • (2000) Genome Res. , vol.10 , pp. 1435-1444
    • Jorde, J.B.1
  • 63
    • 4544388331 scopus 로고    scopus 로고
    • Linkage disequilibrium and sequence diversity in a 500-kbp region around the adh1 locus in elite maize germplasm
    • M. Jung A. Ching D. Bhattramakki M. Dolan S. Tingey M. Morgante A. Rafalski 2004 Linkage disequilibrium and sequence diversity in a 500-kbp region around the adh1 locus in elite maize germplasm Theor. Appl. Genet. 109 681 689
    • (2004) Theor. Appl. Genet. , vol.109 , pp. 681-689
    • Jung, M.1    Ching, A.2    Bhattramakki, D.3    Dolan, M.4    Tingey, S.5    Morgante, M.6    Rafalski, A.7
  • 64
    • 0035544529 scopus 로고    scopus 로고
    • Estimation of linkage disequilibrium for loci with multiple alleles: Basic approach and an application using data from bighorn sheep
    • S.T. Kalinowski P.W. Hedrick 2001 Estimation of linkage disequilibrium for loci with multiple alleles: basic approach and an application using data from bighorn sheep Heredity 87 698 708
    • (2001) Heredity , vol.87 , pp. 698-708
    • Kalinowski, S.T.1    Hedrick, P.W.2
  • 65
    • 0035051715 scopus 로고    scopus 로고
    • Enhanced efficiency of quantitative trait loci mapping analysis based on multivariate complexes of quantitative traits
    • A.B. Korol Y.I. Ronin A.M. Itskovich J. Peng E. Nevo 2001 Enhanced efficiency of quantitative trait loci mapping analysis based on multivariate complexes of quantitative traits Genetics 157 1789 1803
    • (2001) Genetics , vol.157 , pp. 1789-1803
    • Korol, A.B.1    Ronin, Y.I.2    Itskovich, A.M.3    Peng, J.4    Nevo, E.5
  • 66
    • 5144221069 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars
    • A.T.W. Kraakman R.E. Niks P.M.M.M. Vanden Berg P. Stam F.A. Van Eeuwijk 2004 Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars Genetics 168 435 446
    • (2004) Genetics , vol.168 , pp. 435-446
    • Kraakman, A.T.W.1    Niks, R.E.2    Vanden Berg, P.M.M.M.3    Stam, P.4    Van Eeuwijk, F.A.5
  • 67
    • 0033840165 scopus 로고    scopus 로고
    • Linkage disequilibrium and fingerprinting in sugar beet
    • T. Kraft M. Hansen N.-O. Nilsson 2000 Linkage disequilibrium and fingerprinting in sugar beet Theor. Appl. Genet. 101 323 326
    • (2000) Theor. Appl. Genet. , vol.101 , pp. 323-326
    • Kraft, T.1    Hansen, M.2    Nilsson, N.-O.3
  • 68
    • 2942738764 scopus 로고    scopus 로고
    • Balancing claims for balancing selection
    • M. Kreitman A.D. Rienzo 2004 Balancing claims for balancing selection Trends Genet. 20 300 304
    • (2004) Trends Genet. , vol.20 , pp. 300-304
    • Kreitman, M.1    Rienzo, A.D.2
  • 69
    • 16444376144 scopus 로고    scopus 로고
    • Linkage disequilibrium analysis of hexaploid wheat
    • 10-14 January, Town & Country Convention Center, San Diego, CA
    • Kruger S.A., Able J.A., Chalmers K.J., Langridge P. (2004). Linkage disequilibrium analysis of hexaploid wheat. In: Plant & Animal Genomes XII Conference, 10-14 January, Town & Country Convention Center, San Diego, CA, P321
    • (2004) Plant & Animal Genomes XII Conference
    • Kruger, S.A.1    Able, J.A.2    Chalmers, K.J.3    Langridge, P.4
  • 70
    • 16344369394 scopus 로고    scopus 로고
    • Genetic basis of pre-harvest sprouting tolerance using single-locus and two-locus QTL analyses in bread wheat
    • P.L. Kulwal R. Singh H.S. Balyan P.K. Gupta 2004 Genetic basis of pre-harvest sprouting tolerance using single-locus and two-locus QTL analyses in bread wheat Funct. Integr. Genomics 4 94 101
    • (2004) Funct. Integr. Genomics , vol.4 , pp. 94-101
    • Kulwal, P.L.1    Singh, R.2    Balyan, H.S.3    Gupta, P.K.4
  • 71
    • 0842330683 scopus 로고    scopus 로고
    • Testing for linkage disequilibrium in the New Zealand radiata pine breeding population
    • S. Kumar C. Echt P.L. Wilcox T.E. Richardson 2004 Testing for linkage disequilibrium in the New Zealand radiata pine breeding population Theor. Appl. Genet. 108 292 298
    • (2004) Theor. Appl. Genet. , vol.108 , pp. 292-298
    • Kumar, S.1    Echt, C.2    Wilcox, P.L.3    Richardson, T.E.4
  • 72
    • 0033675209 scopus 로고    scopus 로고
    • Hardy-Weinberg and linkage equilibrium estimates in the BSSS and BSCB1 random mated populations
    • J.A. Labate K.R. Lamkey M. Lee W. Woodman 2000 Hardy-Weinberg and linkage equilibrium estimates in the BSSS and BSCB1 random mated populations Maydica 45 243 255
    • (2000) Maydica , vol.45 , pp. 243-255
    • Labate, J.A.1    Lamkey, K.R.2    Lee, M.3    Woodman, W.4
  • 73
    • 0031939968 scopus 로고    scopus 로고
    • Linkage disequilibrium and gene mapping: An empirical least-squares approach
    • L.C. Lazzeroni 1998 Linkage disequilibrium and gene mapping: An empirical least-squares approach Am. J. Hum. Genet. 62 159 170
    • (1998) Am. J. Hum. Genet. , vol.62 , pp. 159-170
    • Lazzeroni, L.C.1
  • 74
    • 0027236091 scopus 로고
    • Localization of the EPM1 gene for progressive myoclonus epilepsy on chromosome 21: Linkage disequilibrium allows high resolution mapping
    • A.-E. Lehesjoki M. Koskiniemi R. Norio S. Tirrito P. Sistonen E. Lander A. de la Chapelle 1993 Localization of the EPM1 gene for progressive myoclonus epilepsy on chromosome 21: linkage disequilibrium allows high resolution mapping Hum. Mol. Genet. 2 1229 1234
    • (1993) Hum. Mol. Genet. , vol.2 , pp. 1229-1234
    • Lehesjoki, A.-E.1    Koskiniemi, M.2    Norio, R.3    Tirrito, S.4    Sistonen, P.5    Lander, E.6    De La Chapelle, A.7
  • 75
    • 0023796209 scopus 로고
    • On measures of gametic disequilibrium
    • R.C. Lewontin 1988 On measures of gametic disequilibrium Genetics 120 849 852
    • (1988) Genetics , vol.120 , pp. 849-852
    • Lewontin, R.C.1
  • 76
    • 0347361674 scopus 로고    scopus 로고
    • Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data
    • N. Li M. Stephens 2003 Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data Genetics 165 2213 2233
    • (2003) Genetics , vol.165 , pp. 2213-2233
    • Li, N.1    Stephens, M.2
  • 77
  • 78
    • 0035075317 scopus 로고    scopus 로고
    • Multipoint linkage-disequilibrium-mapping approach based on the case-parent trio design
    • K.-Y. Liang F.-C. Hsu T.H. Beaty K.C. Barnes 2001 Multipoint linkage-disequilibrium-mapping approach based on the case-parent trio design Am. J. Hum. Genet. 68 937 950
    • (2001) Am. J. Hum. Genet. , vol.68 , pp. 937-950
    • Liang, K.-Y.1    Hsu, F.-C.2    Beaty, T.H.3    Barnes, K.C.4
  • 79
    • 0035895254 scopus 로고    scopus 로고
    • Heterogeneous geographic patterns of nucleotide diversity between two alcohol dehydrogenase genes in wild barley Hordeum vulgare subspecies spontaneum
    • J.-Z. Lin A.H.D. Brown M.T. Clegg 2001 Heterogeneous geographic patterns of nucleotide diversity between two alcohol dehydrogenase genes in wild barley Hordeum vulgare subspecies spontaneum Proc. Natl. Acad. Sci. USA 98 531 536
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 531-536
    • Lin, J.-Z.1    Brown, A.H.D.2    Clegg, M.T.3
  • 80
    • 12244278248 scopus 로고    scopus 로고
    • The influence of linkage and inbreeding on patterns of nucleotide sequence diversity at duplicate alcohol dehydrogenase loci in wild barley Hordeum vulgare ssp. spontaneum
    • J.-Z. Lin P.L. Morrell M.T. Clegg 2002 The influence of linkage and inbreeding on patterns of nucleotide sequence diversity at duplicate alcohol dehydrogenase loci in wild barley Hordeum vulgare ssp. spontaneum Genetics 162 2007 2015
    • (2002) Genetics , vol.162 , pp. 2007-2015
    • Lin, J.-Z.1    Morrell, P.L.2    Clegg, M.T.3
  • 81
    • 0347991996 scopus 로고    scopus 로고
    • Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites
    • K. Liu M. Goodman S. Muse J.S. Smith Buckler J. Doebley 2003 Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites Genetics 165 2117 2128
    • (2003) Genetics , vol.165 , pp. 2117-2128
    • Liu, K.1    Goodman, M.2    Muse, S.3    Smith, J.S.4    Buckler5    Doebley, J.6
  • 82
    • 0037398223 scopus 로고    scopus 로고
    • A haplotype-based algorithm for multilocus linkage disequilibrium mapping of quantitative trait loci with epistasis
    • X.Y. Lou G. Casella R.C. Littell M.C.K. Yang J.A. Johnson R. Wu 2003 A haplotype-based algorithm for multilocus linkage disequilibrium mapping of quantitative trait loci with epistasis Genetics 163 1533 1548
    • (2003) Genetics , vol.163 , pp. 1533-1548
    • Lou, X.Y.1    Casella, G.2    Littell, R.C.3    Yang, M.C.K.4    Johnson, J.A.5    Wu, R.6
  • 83
    • 0037277566 scopus 로고    scopus 로고
    • Multitrait fine mapping of quantitative trait loci using combined linkage disequilibria and linkage analysis
    • M.S. Lund P. Sorensen B. Guldbrandtsen D.A. Sorensen 2003 Multitrait fine mapping of quantitative trait loci using combined linkage disequilibria and linkage analysis Genetics 163 405 410
    • (2003) Genetics , vol.163 , pp. 405-410
    • Lund, M.S.1    Sorensen, P.2    Guldbrandtsen, B.3    Sorensen, D.A.4
  • 84
    • 17844398921 scopus 로고    scopus 로고
    • Population structure and long-range linkage disequilibrium in a durum wheat elite collection
    • 10-14 January, Town & Country Convention Center, San Diego, CA
    • Maccaferri M., Sanguineti M.C., Noli E., Tuberosa R. (2004). Population structure and long-range linkage disequilibrium in a durum wheat elite collection. In: Plant & Animal Genomes XII Conference, 10-14 January, Town & Country Convention Center, San Diego, CA, P416
    • (2004) Plant & Animal Genomes XII Conference
    • Maccaferri, M.1    Sanguineti, M.C.2    Noli, E.3    Tuberosa, R.4
  • 85
    • 0035671407 scopus 로고    scopus 로고
    • The genetic architecture of quantitative traits
    • T.F.C. Mackay 2001 The genetic architecture of quantitative traits Annu. Rev. Genet. 33 303 39
    • (2001) Annu. Rev. Genet. , vol.33 , pp. 303-39
    • MacKay, T.F.C.1
  • 88
    • 33947327616 scopus 로고    scopus 로고
    • Use of SSR marker data to study linkage disequilibrium and population structure in Hordeum vulgare: Prospects for association mapping in barley
    • April 4-7, Novotel Barossa Valley Resort, South Australia
    • Mather D.E., Hayes P.M., Chalmers K., Eglinton J., Matus I., Richardson K., von Zitzewitz J., Marquez-Cedillo L. (2004). Use of SSR marker data to study linkage disequilibrium and population structure in Hordeum vulgare: Prospects for association mapping in barley. In: Linkage Disequilibrium Workshop, April 4-7, Novotel Barossa Valley Resort, South Australia
    • (2004) Linkage Disequilibrium Workshop
    • Mather, D.E.1    Hayes, P.M.2    Chalmers, K.3    Eglinton, J.4    Matus, I.5    Richardson, K.6    Von Zitzewitz, J.7    Marquez-Cedillo, L.8
  • 89
    • 1642579577 scopus 로고    scopus 로고
    • Development and characterization of recombinant chromosome substitution lines (RCSLs) using Hordeum vulgare subsp. spontaneum as a source of donor alleles in Hordeum vulgare subsp. vulgare background
    • I. Matus A Corey T. Filichkin P.M. Hayes M.I. Vales J. Kling O. Riera-Lizarazu K. Sato W. Powell R. Waugh 2003 Development and characterization of recombinant chromosome substitution lines (RCSLs) using Hordeum vulgare subsp. spontaneum as a source of donor alleles in Hordeum vulgare subsp. vulgare background Genome 46 1010 1023
    • (2003) Genome , vol.46 , pp. 1010-1023
    • Matus, I.1    Corey, A.2    Filichkin, T.3    Hayes, P.M.4    Vales, M.I.5    Kling, J.6    Riera-Lizarazu, O.7    Sato, K.8    Powell, W.9    Waugh, R.10
  • 90
    • 0037297577 scopus 로고    scopus 로고
    • Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana
    • R. Mauricio E.A. Stahl T. Korves D. Tian M. Kreitman J. Bergelson 2003 Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana Genetics 163 735 746
    • (2003) Genetics , vol.163 , pp. 735-746
    • Mauricio, R.1    Stahl, E.A.2    Korves, T.3    Tian, D.4    Kreitman, M.5    Bergelson, J.6
  • 92
    • 0002688868 scopus 로고    scopus 로고
    • Advances in the analysis of data on quantitative trait loci
    • Chopra V.L., Singh R.B., Verma A. (eds.), New Delhi, India
    • Melchinger A.E. (1996). Advances in the analysis of data on quantitative trait loci. In: Chopra V.L., Singh R.B., Verma A. (eds.), Proceedings, 2nd International Crop Science Congress, New Delhi, India, pp. 773-791
    • (1996) Proceedings, 2nd International Crop Science Congress , pp. 773-791
    • Melchinger, A.E.1
  • 93
    • 0034055765 scopus 로고    scopus 로고
    • Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci
    • T.H.E. Meuwissen M.E. Goddard 2000 Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci Genetics 155 421 430
    • (2000) Genetics , vol.155 , pp. 421-430
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 94
    • 2442597278 scopus 로고    scopus 로고
    • Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data
    • T.H.E. Meuwissen M.E. Goddard 2004 Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data Genet. Sel. Evol. 36 261 279
    • (2004) Genet. Sel. Evol. , vol.36 , pp. 261-279
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 95
    • 0344069720 scopus 로고    scopus 로고
    • DNA variation in the wild plant Arabidopsis thaliana revealed by amplified fragment length polymorphism analysis
    • N.T. Miyashita A. Kawabe H. Innan 1999 DNA variation in the wild plant Arabidopsis thaliana revealed by amplified fragment length polymorphism analysis Genetics 152 1723 1731
    • (1999) Genetics , vol.152 , pp. 1723-1731
    • Miyashita, N.T.1    Kawabe, A.2    Innan, H.3
  • 96
    • 0345255227 scopus 로고    scopus 로고
    • Multipoint linkage-disequilibrium mapping narrows location interval and identifies mutation heterogeneity
    • A.P. Morris J.C. Whittaker C.-F. Xu L.K. Hosking D.J. Balding 2003 Multipoint linkage-disequilibrium mapping narrows location interval and identifies mutation heterogeneity Proc. Natl. Acad. Sci. USA 100 13442 13446
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 13442-13446
    • Morris, A.P.1    Whittaker, J.C.2    Xu, C.-F.3    Hosking, L.K.4    Balding, D.J.5
  • 98
    • 3042745450 scopus 로고    scopus 로고
    • Association genetics of complex traits in conifers
    • D.B. Neale O. Savolainen 2004 Association genetics of complex traits in conifers Trends Plant Sci. 9 325 330
    • (2004) Trends Plant Sci. , vol.9 , pp. 325-330
    • Neale, D.B.1    Savolainen, O.2
  • 100
    • 0036468808 scopus 로고    scopus 로고
    • Linkage disequilibrium: What history has to tell us?
    • M. Nordborg S. Tavaré 2002 Linkage disequilibrium: what history has to tell us? Trends. Genet. 18 83 90
    • (2002) Trends. Genet. , vol.18 , pp. 83-90
    • Nordborg, M.1    Tavaré, S.2
  • 101
    • 0038315436 scopus 로고    scopus 로고
    • Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks
    • M. Nothnagel R. Fürst K. Rohde 2002 Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks Hum. Hered. 54 186 198
    • (2002) Hum. Hered. , vol.54 , pp. 186-198
    • Nothnagel, M.1    Fürst, R.2    Rohde, K.3
  • 105
    • 17844402906 scopus 로고    scopus 로고
    • Owens C.L. (2003b). http://www.ars.usda.gov/research/projects/projects. htm?ACCN_NO=407003&showpars=true&fy= 2003
    • (2003)
    • Owens, C.L.1
  • 106
    • 17844407100 scopus 로고    scopus 로고
    • Combining linkage analysis and linkage disequilibrium mapping to dissect the genetics of fruit color in grapevine
    • 21-25 June, University of California, Davis, California, USA
    • Owens C.L. (2004). Combining linkage analysis and linkage disequilibrium mapping to dissect the genetics of fruit color in grapevine. In: Seventh International Symposium on Grapevine Physiology & Biotechnology, 21-25 June, University of California, Davis, California, USA
    • (2004) Seventh International Symposium on Grapevine Physiology & Biotechnology
    • Owens, C.L.1
  • 107
  • 108
    • 3042714186 scopus 로고    scopus 로고
    • Long-range patterns of diversity and linkage disequilibrium surrounding the maize Y1 gene are indicative of an asymmetric selective sweep
    • K. Palaisa M. Morgante S. Tingey A. Rafalski 2004 Long-range patterns of diversity and linkage disequilibrium surrounding the maize Y1 gene are indicative of an asymmetric selective sweep Proc. Natl. Acad. Sci. USA. 101 9885 9890
    • (2004) Proc. Natl. Acad. Sci. USA. , vol.101 , pp. 9885-9890
    • Palaisa, K.1    Morgante, M.2    Tingey, S.3    Rafalski, A.4
  • 109
    • 0041419283 scopus 로고    scopus 로고
    • Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci
    • K.A. Palaisa M. Morgante M. Williams A. Rafalski 2003 Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci Plant Cell 15 1795 1806
    • (2003) Plant Cell , vol.15 , pp. 1795-1806
    • Palaisa, K.A.1    Morgante, M.2    Williams, M.3    Rafalski, A.4
  • 114
    • 0032912347 scopus 로고    scopus 로고
    • Molecular population genetics of floral homeotic loci: Departures from the equilibrium-neutral model at the APETALA3 and PISTILLATA genes of Arabidopsis thaliana
    • M.D. Purugganan J.L. Suddith 1999 Molecular population genetics of floral homeotic loci: departures from the equilibrium-neutral model at the APETALA3 and PISTILLATA genes of Arabidopsis thaliana Genetics 151 839 848
    • (1999) Genetics , vol.151 , pp. 839-848
    • Purugganan, M.D.1    Suddith, J.L.2
  • 115
    • 0036008761 scopus 로고    scopus 로고
    • Applications of single nucleotide polymorphisms in crop genetics
    • A. Rafalski 2002 Applications of single nucleotide polymorphisms in crop genetics Curr. Opin. Plant Biol. 5 94 100
    • (2002) Curr. Opin. Plant Biol. , vol.5 , pp. 94-100
    • Rafalski, A.1
  • 116
    • 1642473027 scopus 로고    scopus 로고
    • Corn and humans: Recombination and linkage disequilibrium in two genomes of similar size
    • A. Rafalski M. Morgante 2004 Corn and humans: recombination and linkage disequilibrium in two genomes of similar size Trends Genet. 20 103 111
    • (2004) Trends Genet. , vol.20 , pp. 103-111
    • Rafalski, A.1    Morgante, M.2
  • 122
    • 2542420339 scopus 로고    scopus 로고
    • A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome
    • J. Russell A. Booth J. Fuller B. Harrower P. Hedley G. Machray W. Powell 2004 A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome Genome 47 389 398
    • (2004) Genome , vol.47 , pp. 389-398
    • Russell, J.1    Booth, A.2    Fuller, J.3    Harrower, B.4    Hedley, P.5    MacHray, G.6    Powell, W.7
  • 124
    • 0037213556 scopus 로고    scopus 로고
    • Hitchhiking mapping - Functional genomics from the population genetics perspective
    • C. Schlotterer 2003 Hitchhiking mapping - functional genomics from the population genetics perspective Trends Genet. 19 32 38
    • (2003) Trends Genet. , vol.19 , pp. 32-38
    • Schlotterer, C.1
  • 125
    • 0033361763 scopus 로고    scopus 로고
    • Linkage-disequilibrium mapping of disease genes by reconstruction of ancestral haplotypes in founder populations
    • S.K. Service D.W. Lang N.B. Freimer L.A. Sandkuijl 1999 Linkage-disequilibrium mapping of disease genes by reconstruction of ancestral haplotypes in founder populations Am. J. Hum. Genet. 64 1728 1738
    • (1999) Am. J. Hum. Genet. , vol.64 , pp. 1728-1738
    • Service, S.K.1    Lang, D.W.2    Freimer, N.B.3    Sandkuijl, L.A.4
  • 126
    • 0037356573 scopus 로고    scopus 로고
    • Molecular population genetics of the Arabidopsis CLAVATA2 region: The genomic scale of variation and selection in a selfing species
    • K.A. Shepard M.D. Purugganan 2003 Molecular population genetics of the Arabidopsis CLAVATA2 region: the genomic scale of variation and selection in a selfing species Genetics 163 1083 1095
    • (2003) Genetics , vol.163 , pp. 1083-1095
    • Shepard, K.A.1    Purugganan, M.D.2
  • 127
    • 4444243905 scopus 로고    scopus 로고
    • One potato, two potato: Haplotype association mapping in autotetraploids
    • I. Simko 2004 One potato, two potato: haplotype association mapping in autotetraploids Trends Plant Sci. 9 441 448
    • (2004) Trends Plant Sci. , vol.9 , pp. 441-448
    • Simko, I.1
  • 128
    • 0842330762 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato Solanum tuberosum through a candidate gene approach
    • I. Simko S. Costanzo K.G. Haynes B.J. Chris R.W. Jones 2004a Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato Solanum tuberosum through a candidate gene approach Theor. Appl. Genet. 108 217 224
    • (2004) Theor. Appl. Genet. , vol.108 , pp. 217-224
    • Simko, I.1    Costanzo, S.2    Haynes, K.G.3    Chris, B.J.4    Jones, R.W.5
  • 129
    • 3142703727 scopus 로고    scopus 로고
    • Mapping genes for resistance to Verticillium albo-atrum in tetraploid and diploid potato populations using haplotype association tests and genetic analysis
    • I. Simko K.G. Haynes E.E. Ewing S Costanzo B.J. Christ R.W. Jones 2004b Mapping genes for resistance to Verticillium albo-atrum in tetraploid and diploid potato populations using haplotype association tests and genetic analysis Mol. Genet. Genomics 271 522 531
    • (2004) Mol. Genet. Genomics , vol.271 , pp. 522-531
    • Simko, I.1    Haynes, K.G.2    Ewing, E.E.3    Costanzo, S.4    Christ, B.J.5    Jones, R.W.6
  • 130
    • 17844398177 scopus 로고    scopus 로고
    • The application of genecology to the discovery of associations between phenotypes and molecular markers in natural populations of perennial ryegrass
    • 10-14 January, Town & Country Convention Center, San Diego, CA
    • Skøt L., Humpherys M., Heywood S., Sanderson R., Armstead I., Thomas I., Chorlton K., Hamilton R.S. (2004). The application of genecology to the discovery of associations between phenotypes and molecular markers in natural populations of perennial ryegrass. In: Plant & Animal Genomes XII Conference, 10-14 January, Town & Country Convention Center, San Diego, CA, W137
    • (2004) Plant & Animal Genomes XII Conference
    • Skøt, L.1    Humpherys, M.2    Heywood, S.3    Sanderson, R.4    Armstead, I.5    Thomas, I.6    Chorlton, K.7    Hamilton, R.S.8
  • 131
    • 0030131165 scopus 로고    scopus 로고
    • Testing for linkage disequilibrium in genotypic data using the expectation-maximization algorithm
    • M. Slatkin L. Excoffier 1996 Testing for linkage disequilibrium in genotypic data using the expectation-maximization algorithm Heredity 76 377 383
    • (1996) Heredity , vol.76 , pp. 377-383
    • Slatkin, M.1    Excoffier, L.2
  • 132
    • 0029858544 scopus 로고    scopus 로고
    • The TDT and other family based tests for linkage disequilibrium and association
    • R.S. Spielman W.J. Ewens 1996 The TDT and other family based tests for linkage disequilibrium and association Am. J. Hum. Genet. 59 983 989
    • (1996) Am. J. Hum. Genet. , vol.59 , pp. 983-989
    • Spielman, R.S.1    Ewens, W.J.2
  • 133
    • 0027377799 scopus 로고
    • Transmission test for linkage disequilibrium: The insulin gene region and insulin-dependent diabetes mellitus (IDDM)
    • R.S. Spielman R.E. McGinnis W.J. Ewens 1993 Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM) Am. J. Hum. Genet. 52 506 513
    • (1993) Am. J. Hum. Genet. , vol.52 , pp. 506-513
    • Spielman, R.S.1    McGinnis, R.E.2    Ewens, W.J.3
  • 134
    • 0033549777 scopus 로고    scopus 로고
    • Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis
    • E.A. Stahl G. Dwyer R. Mauricio M. Kreitman J. Bargelson 1999 Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis Nature 400 667 671
    • (1999) Nature , vol.400 , pp. 667-671
    • Stahl, E.A.1    Dwyer, G.2    Mauricio, R.3    Kreitman, M.4    Bargelson, J.5
  • 136
    • 0033371127 scopus 로고    scopus 로고
    • Synergy of empirical breeding, marker assisted selection and genomics to increase crop yield potential
    • C.W. Stuber M. Polacco M.L. Senior 1999 Synergy of empirical breeding, marker assisted selection and genomics to increase crop yield potential Crop Sci. 39 1571 1583
    • (1999) Crop Sci. , vol.39 , pp. 1571-1583
    • Stuber, C.W.1    Polacco, M.2    Senior, M.L.3
  • 138
    • 0031669184 scopus 로고    scopus 로고
    • Overlapping genomic sequences: A treasure trove of single-nucleotide polymorphisms
    • P. Taillon-Miller Z. Gu Q. Li L. Hillier P.Y. Kwok 1998 Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms Genome Res. 8 748 754
    • (1998) Genome Res. , vol.8 , pp. 748-754
    • Taillon-Miller, P.1    Gu, Z.2    Li, Q.3    Hillier, L.4    Kwok, P.Y.5
  • 139
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutational hypothesis by DNA polymorphism
    • F. Tajima 1989 Statistical method for testing the neutral mutational hypothesis by DNA polymorphism Genetics 123 585 595
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 140
    • 0036862057 scopus 로고    scopus 로고
    • Patterns of Diversity and Recombination Along Chromosome 1 of Maize (Zea maysssp. maysL.)
    • M.I. Tenaillon M.C. Sawkins L.K. Anderson SM Stack J. Doebley B.S. Gaut 2002 Patterns of Diversity and Recombination Along Chromosome 1 of Maize (Zea maysssp. maysL.) Genetics 162 1401 1413
    • (2002) Genetics , vol.162 , pp. 1401-1413
    • Tenaillon, M.I.1    Sawkins, M.C.2    Anderson, L.K.3    Stack, S.M.4    Doebley, J.5    Gaut, B.S.6
  • 142
    • 3042595170 scopus 로고    scopus 로고
    • Selection versus demography: A multilocous investigation of the domestication process in maize
    • M.I. Tenaillon J. U'Ren O. Tenaillon B.S. Gaut 2004 Selection versus demography: a multilocous investigation of the domestication process in maize Mol. Biol. Evol. 21 1214 1225
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 1214-1225
    • Tenaillon, M.I.1    U'Ren, J.2    Tenaillon, O.3    Gaut, B.S.4
  • 143
    • 0028968329 scopus 로고
    • A powerful likelihood method for the analysis of linkage disequilibrium between trait loci and one or more polymorphic marker loci
    • J.D. Terwilliger 1995 A powerful likelihood method for the analysis of linkage disequilibrium between trait loci and one or more polymorphic marker loci Am. J. Hum. Genet. 56 777 787
    • (1995) Am. J. Hum. Genet. , vol.56 , pp. 777-787
    • Terwilliger, J.D.1
  • 144
    • 0032403973 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of complex disease: Fantasy or reality?
    • J.D. Terwilliger K.M. Weiss 1998 Linkage disequilibrium mapping of complex disease: fantasy or reality? Curr. Opin. Biotech. 9 578 594
    • (1998) Curr. Opin. Biotech. , vol.9 , pp. 578-594
    • Terwilliger, J.D.1    Weiss, K.M.2
  • 145
    • 79959503826 scopus 로고    scopus 로고
    • The international HapMap project
    • The International HapMap Consortium
    • The International HapMap Consortium 2003 The international HapMap project Nature 426 789 796
    • (2003) Nature , vol.426 , pp. 789-796
  • 148
    • 0344585289 scopus 로고    scopus 로고
    • Role of evolutionary history on haplotype block structure in the human genome: Implications for disease mapping
    • S.A. Tishkoff B.C. Verrelli 2003 Role of evolutionary history on haplotype block structure in the human genome: implications for disease mapping Curr. Opin. Genet. Develop. 13 569 575
    • (2003) Curr. Opin. Genet. Develop. , vol.13 , pp. 569-575
    • Tishkoff, S.A.1    Verrelli, B.C.2
  • 150
    • 0004735512 scopus 로고    scopus 로고
    • Quantitative trait dissection analysis in eucalyptus using RAPD markers: 2. Linkage disequilibrium in a factorial design between E. urophylla and E. grandis
    • D. Verhaegen C. Plomion M. Poitel P. Costa A. Kremer 1998 Quantitative trait dissection analysis in eucalyptus using RAPD markers: 2. linkage disequilibrium in a factorial design between E. urophylla and E. grandis Forest Genet. 5 61 69
    • (1998) Forest Genet. , vol.5 , pp. 61-69
    • Verhaegen, D.1    Plomion, C.2    Poitel, M.3    Costa, P.4    Kremer, A.5
  • 152
    • 0032753652 scopus 로고    scopus 로고
    • Mapping QTLs with epistatic effects and QTL × environment interactions by mixed linear model approaches
    • D.L. Wang J. Zhu Z.K. Li A.H. Paterson 1999 Mapping QTLs with epistatic effects and QTL × environment interactions by mixed linear model approaches Theor. Appl. Genet. 99 1255 1264
    • (1999) Theor. Appl. Genet. , vol.99 , pp. 1255-1264
    • Wang, D.L.1    Zhu, J.2    Li, Z.K.3    Paterson, A.H.4
  • 154
    • 0036137130 scopus 로고    scopus 로고
    • Linkage disequilibrium and the mapping of complex human traits
    • K.M. Weiss A.G. Clark 2002 Linkage disequilibrium and the mapping of complex human traits Trends Genet. 18 19 24
    • (2002) Trends Genet. , vol.18 , pp. 19-24
    • Weiss, K.M.1    Clark, A.G.2
  • 155
    • 17844382885 scopus 로고    scopus 로고
    • Genetic architecture of juvenile wood density in Pinus radiata and implications for design of linkage disequilibrium studies
    • 12-16 January, Town & Country Convention Center, San Diego, CA
    • Wilcox P.L., Cato S., Ball R.D., Kumar S., Lee J.R., Kent J., Richardson T.E., Echt C.S. (2002). Genetic architecture of juvenile wood density in Pinus radiata and implications for design of linkage disequilibrium studies. In: Plant, Animal & Microbe Genomes X Conference, 12-16 January, Town & Country Convention Center, San Diego, CA
    • (2002) Plant, Animal & Microbe Genomes X Conference
    • Wilcox, P.L.1    Cato, S.2    Ball, R.D.3    Kumar, S.4    Lee, J.R.5    Kent, J.6    Richardson, T.E.7    Echt, C.S.8
  • 157
    • 0036188948 scopus 로고    scopus 로고
    • Joint linkage and linkage disequilibrium mapping of quantitative trait loci in natural populations
    • R. Wu C.-X. Ma G. Casella 2002 Joint linkage and linkage disequilibrium mapping of quantitative trait loci in natural populations Genetics 160 779 792
    • (2002) Genetics , vol.160 , pp. 779-792
    • Wu, R.1    Ma, C.-X.2    Casella, G.3
  • 158
    • 0035105207 scopus 로고    scopus 로고
    • Joint linkage and linkage disequilibrium mapping in natural populations
    • R. Wu Z.-B. Zeng 2001 Joint linkage and linkage disequilibrium mapping in natural populations Genetics 157 899 909
    • (2001) Genetics , vol.157 , pp. 899-909
    • Wu, R.1    Zeng, Z.-B.2
  • 159
    • 0036937858 scopus 로고    scopus 로고
    • Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice
    • Y.Z. Xing Y.F. Tan J.P. Hua X.L. Sun C.G. Xu Q. Zhang 2002 Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice Theor. Appl. Genet. 105 248 257
    • (2002) Theor. Appl. Genet. , vol.105 , pp. 248-257
    • Xing, Y.Z.1    Tan, Y.F.2    Hua, J.P.3    Sun, X.L.4    Xu, C.G.5    Zhang, Q.6
  • 160
    • 0030994211 scopus 로고    scopus 로고
    • Fine-scale genetic mapping based on linkage disequilibrium: Theory and applications
    • M. Xiong S.-W. Guo 1997 Fine-scale genetic mapping based on linkage disequilibrium: Theory and applications Am. J. Hum. Genet. 60 1513 1531
    • (1997) Am. J. Hum. Genet. , vol.60 , pp. 1513-1531
    • Xiong, M.1    Guo, S.-W.2
  • 163
    • 0033678320 scopus 로고    scopus 로고
    • The D' measure of overall gametic disequilibrium between pairs of multiallelic loci
    • C. Zapata 2000 The D' measure of overall gametic disequilibrium between pairs of multiallelic loci Evolution 54 1809 1812
    • (2000) Evolution , vol.54 , pp. 1809-1812
    • Zapata, C.1
  • 165
    • 2942572999 scopus 로고    scopus 로고
    • Optimal Step Length EM Algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping
    • P. Zhang H. Sheng A. Morabia T.C. Gilliam 2003 Optimal Step Length EM Algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping BMC Bioinformatics 4 1 5
    • (2003) BMC Bioinformatics , vol.4 , pp. 1-5
    • Zhang, P.1    Sheng, H.2    Morabia, A.3    Gilliam, T.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.