-
1
-
-
0030801002
-
Gapped Blast and PSI-Blast: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped Blast and PSI-Blast: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0030888229
-
Oat-maize chromosome addition lines: A new system for mapping the maize genome
-
Ananiev EV, et al (1997) Oat-maize chromosome addition lines: a new system for mapping the maize genome. Proc Natl Acad Sci USA 94:3524-3529
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 3524-3529
-
-
Ananiev, E.V.1
-
3
-
-
0032986249
-
Identification of genetic loci affecting amylose content and agronomic traits on chromosome 4A of wheat
-
Araki E (1999) Identification of genetic loci affecting amylose content and agronomic traits on chromosome 4A of wheat. Theor Appl Genet 98:977-984
-
(1999)
Theor Appl Genet
, vol.98
, pp. 977-984
-
-
Araki, E.1
-
4
-
-
0036906745
-
Haplotype and linkage disequilibrium architecture for human cancer-associated genes
-
Bonnen PE, Wang PJ, Kimmel M, Chakraborty R, Nelson DL (2002) Haplotype and linkage disequilibrium architecture for human cancer-associated genes. Genome Res 12:1846-1853
-
(2002)
Genome Res
, vol.12
, pp. 1846-1853
-
-
Bonnen, P.E.1
Wang, P.J.2
Kimmel, M.3
Chakraborty, R.4
Nelson, D.L.5
-
5
-
-
0034130561
-
Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
-
Brenner S, Johnson M, Bridgham J, Golda G, Lloyd DH, Johnson D, Luo S, McCurdy S, Foy M, Ewan M, Roth R, George D, Eletr S, Albrecht G, Vermaas E, Williams SR, Moon K, Burcham T, Pallas M, DuBridge RB, et al (2000) Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays. Nat Biotechnol 18:630-634
-
(2000)
Nat Biotechnol
, vol.18
, pp. 630-634
-
-
Brenner, S.1
Johnson, M.2
Bridgham, J.3
Golda, G.4
Lloyd, D.H.5
Johnson, D.6
Luo, S.7
McCurdy, S.8
Foy, M.9
Ewan, M.10
Roth, R.11
George, D.12
Eletr, S.13
Albrecht, G.14
Vermaas, E.15
Williams, S.R.16
Moon, K.17
Burcham, T.18
Pallas, M.19
DuBridge, R.B.20
more..
-
6
-
-
0036008763
-
Plant molecular diversity and applications to genomics
-
Buckler ES IV, Thornsberry JM (2002) Plant molecular diversity and applications to genomics. Curr Opin Plant Biol 5:107-111
-
(2002)
Curr Opin Plant Biol
, vol.5
, pp. 107-111
-
-
Buckler IV, E.S.1
Thornsberry, J.M.2
-
7
-
-
0038744804
-
SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
-
Ching A, Caldwell K, Jung M, Dolan M, Smith O, Tingey S, Morgante M, Rafalski A (2002) SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines. BMC Genet 3:19
-
(2002)
BMC Genet
, vol.3
, pp. 19
-
-
Ching, A.1
Caldwell, K.2
Jung, M.3
Dolan, M.4
Smith, O.5
Tingey, S.6
Morgante, M.7
Rafalski, A.8
-
8
-
-
0036016445
-
Extensive interallelic polymorphisms drive meiotic recombination into a crossover pathway
-
Dooner HK (2002) Extensive interallelic polymorphisms drive meiotic recombination into a crossover pathway. Plant Cell 14:1173-1183
-
(2002)
Plant Cell
, vol.14
, pp. 1173-1183
-
-
Dooner, H.K.1
-
9
-
-
2642710921
-
Recombination occurs uniformly within the bronze gene, a meiotic recombination hotspot in the maize genome
-
Dooner HK, Martinez-Ferez IM (1997) Recombination occurs uniformly within the bronze gene, a meiotic recombination hotspot in the maize genome. Plant Cell 9:1633-1646
-
(1997)
Plant Cell
, vol.9
, pp. 1633-1646
-
-
Dooner, H.K.1
Martinez-Ferez, I.M.2
-
11
-
-
0037047037
-
Intraspecific violation of genetic colinearity and its implications in maize
-
Fu H, Dooner HK (2002a) Intraspecific violation of genetic colinearity and its implications in maize. Proc Natl Acad Sci USA 99:9573-9578
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9573-9578
-
-
Fu, H.1
Dooner, H.K.2
-
12
-
-
0037154275
-
Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude
-
Fu H, Dooner HK (2002b) Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude. Proc Natl Acad Sci USA 99:1082-1087
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 1082-1087
-
-
Fu, H.1
Dooner, H.K.2
-
13
-
-
11144358132
-
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization
-
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr (2004) Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Plant Physiol 134:1317-1326
-
(2004)
Plant Physiol
, vol.134
, pp. 1317-1326
-
-
Gardiner, J.1
Schroeder, S.2
Polacco, M.L.3
Sanchez-Villeda, H.4
Fang, Z.5
Morgante, M.6
Landewe, T.7
Fengler, K.8
Useche, F.9
Hanafey, M.10
Tingey, S.11
Chou, H.12
Wing, R.13
Soderlund, C.14
Coe Jr., E.H.15
-
14
-
-
0027163107
-
Molecular evolution of the adh1 locus in the genus Zea
-
Gaut BS, Clegg MT (1993) Molecular evolution of the adh1 locus in the genus Zea. Proc Natl Acad Sci USA 90:5095-5099
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 5095-5099
-
-
Gaut, B.S.1
Clegg, M.T.2
-
15
-
-
0035943090
-
Population genomics: Linkage disequilibrium holds the key
-
Goldstein DB, Weale ME (2001) Population genomics: linkage disequilibrium holds the key. Curr Biol 11:R576-R579
-
(2001)
Curr Biol
, vol.11
-
-
Goldstein, D.B.1
Weale, M.E.2
-
16
-
-
0035010640
-
Automation in genotyping single nucleotide polymorphisms
-
Gut IG (2001) Automation in genotyping single nucleotide polymorphisms. Hum Mutat 17:475-492
-
(2001)
Hum Mutat
, vol.17
, pp. 475-492
-
-
Gut, I.G.1
-
17
-
-
33646226097
-
Linkage disequilibrium in finite populations
-
Hill W, Robertson A (1968) Linkage disequilibrium in finite populations. Theor Appl Genet 38:226-231
-
(1968)
Theor Appl Genet
, vol.38
, pp. 226-231
-
-
Hill, W.1
Robertson, A.2
-
18
-
-
0033786787
-
Linkage disequilibrium and the search for complex disease genes
-
Jorde LB (2000) Linkage disequilibrium and the search for complex disease genes. Genome Res 10:1435-1444
-
(2000)
Genome Res
, vol.10
, pp. 1435-1444
-
-
Jorde, L.B.1
-
19
-
-
0036010768
-
Expanding the genetic map of maize with the intermated B73 x Mol7 (IBM) population
-
Lee M, Sharopova N, Beavis WD, Grant D, Katt M, Blair D, Hallauer A (2002) Expanding the genetic map of maize with the intermated B73 x Mol7 (IBM) population. Plant Mol Biol 48:453-461
-
(2002)
Plant Mol Biol
, vol.48
, pp. 453-461
-
-
Lee, M.1
Sharopova, N.2
Beavis, W.D.3
Grant, D.4
Katt, M.5
Blair, D.6
Hallauer, A.7
-
20
-
-
0002907949
-
The interaction of selection and linkage. I. General considerations; heterotic models
-
Lewontin R (1964) The interaction of selection and linkage. I. General considerations; heterotic models. Genetics 49:49-67
-
(1964)
Genetics
, vol.49
, pp. 49-67
-
-
Lewontin, R.1
-
21
-
-
0031760407
-
Comparative quantitative trait loci mapping of partial resistance to Puccinia sorghi across four populations of European flint maize
-
Lubberstedt T (1998) Comparative quantitative trait loci mapping of partial resistance to Puccinia sorghi across four populations of European flint maize. Phytopathology 88:1324-1329
-
(1998)
Phytopathology
, vol.88
, pp. 1324-1329
-
-
Lubberstedt, T.1
-
22
-
-
0034755894
-
Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome
-
Myers B, Tingey S, Morgante M (2001) Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Genome Res 11:1660-1676
-
(2001)
Genome Res
, vol.11
, pp. 1660-1676
-
-
Myers, B.1
Tingey, S.2
Morgante, M.3
-
23
-
-
0041419283
-
Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci
-
Palaisa KA, Morgante M, Williams M, Rafalski A (2003) Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci. Plant Cell 15:1795-1806
-
(2003)
Plant Cell
, vol.15
, pp. 1795-1806
-
-
Palaisa, K.A.1
Morgante, M.2
Williams, M.3
Rafalski, A.4
-
24
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
25
-
-
0036008761
-
Applications of single nucleotide polymorphisms in crop genetics
-
Rafalski A (2002) Applications of single nucleotide polymorphisms in crop genetics. Curr Opin Plant Biol 5:94-100
-
(2002)
Curr Opin Plant Biol
, vol.5
, pp. 94-100
-
-
Rafalski, A.1
-
26
-
-
1642473027
-
Corn and humans: Recombination and linkage disequilibrium in two genomes of similar size
-
Rafalski A, Morgante M (2004) Corn and humans: recombination and linkage disequilibrium in two genomes of similar size. Trends Genet 20:103-111
-
(2004)
Trends Genet
, vol.20
, pp. 103-111
-
-
Rafalski, A.1
Morgante, M.2
-
27
-
-
0035837267
-
Linkage disequilibrium in the human genome
-
Reich DE, Cargill M, Bolk S, Ireland J, Sabeti PC, Richter DJ, Lavery T, Kouyoumjian R, Farhadian SF, Ward R, Lander ES (2001) Linkage disequilibrium in the human genome. Nature 411:199-204
-
(2001)
Nature
, vol.411
, pp. 199-204
-
-
Reich, D.E.1
Cargill, M.2
Bolk, S.3
Ireland, J.4
Sabeti, P.C.5
Richter, D.J.6
Lavery, T.7
Kouyoumjian, R.8
Farhadian, S.F.9
Ward, R.10
Lander, E.S.11
-
28
-
-
0035949653
-
Structure of linkage disequilibrium and phenotypic associations in the maize genome
-
Remington DL, Thornsberry JM, Matsuoka Y, Wilson LM, Whitt SR, Doebley J, Kresovich S, Goodman MM, Buckler EST (2001) Structure of linkage disequilibrium and phenotypic associations in the maize genome. Proc Natl Acad Sci USA 98:11479-11484
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 11479-11484
-
-
Remington, D.L.1
Thornsberry, J.M.2
Matsuoka, Y.3
Wilson, L.M.4
Whitt, S.R.5
Doebley, J.6
Kresovich, S.7
Goodman, M.M.8
Buckler, E.S.T.9
-
29
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas J, Rozas R (1999) DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
31
-
-
0035134454
-
Enabling large-scale pharmacogenetic studies by high-throughput mutation detection and genotyping technologies
-
Shi MM (2001) Enabling large-scale pharmacogenetic studies by high-throughput mutation detection and genotyping technologies. Clin Chem 47:164-172
-
(2001)
Clin Chem
, vol.47
, pp. 164-172
-
-
Shi, M.M.1
-
32
-
-
0019887799
-
Identification of common molecular subsequecnes
-
Smith TFAW (1981) Identification of common molecular subsequecnes. J Mol Biol 147:195-197
-
(1981)
J Mol Biol
, vol.147
, pp. 195-197
-
-
Smith, T.F.A.W.1
-
33
-
-
0012190262
-
Statistical approaches in Eukaryotic gene prediction
-
Balding D, et al (eds). Wiley, New York
-
Solovyev VV (2001) Statistical approaches in Eukaryotic gene prediction. In: Balding D, et al (eds) Handbook of statistical genetics. Wiley, New York, pp 83-127
-
(2001)
Handbook of Statistical Genetics
, pp. 83-127
-
-
Solovyev, V.V.1
-
34
-
-
0024423475
-
DNA polymorphism in a subdivided population: The expected number of segregating sites in the two-subpopulation model
-
Tajima F (1989a) DNA polymorphism in a subdivided population: the expected number of segregating sites in the two-subpopulation model. Genetics 123:229-240
-
(1989)
Genetics
, vol.123
, pp. 229-240
-
-
Tajima, F.1
-
35
-
-
0024313579
-
The effect of change in population size on DNA polymorphisms
-
Tajima F (1989b) The effect of change in population size on DNA polymorphisms. Genetics 123:585-595
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
36
-
-
0030113221
-
Simple sequence repeats for germplasm analysis and mapping in maize
-
Taramino G, Tingey S (1996) Simple sequence repeats for germplasm analysis and mapping in maize. Genome 39:277-287
-
(1996)
Genome
, vol.39
, pp. 277-287
-
-
Taramino, G.1
Tingey, S.2
-
37
-
-
0035979181
-
Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp.mays L.)
-
Tenaillon MI, Sawkins MC, Long AD, Gaut RL, Doebley JF, Gaut BS (2001) Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp.mays L.). Proc Natl Acad Sci USA 98:9161-9166
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9161-9166
-
-
Tenaillon, M.I.1
Sawkins, M.C.2
Long, A.D.3
Gaut, R.L.4
Doebley, J.F.5
Gaut, B.S.6
-
38
-
-
0036862057
-
Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp.mays L.)
-
Tenaillon MI, Sawkins MC, Anderson LK, Stack SM, Doebley J, Gaut BS (2002) Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp.mays L.). Genetics 162:1401-1413
-
(2002)
Genetics
, vol.162
, pp. 1401-1413
-
-
Tenaillon, M.I.1
Sawkins, M.C.2
Anderson, L.K.3
Stack, S.M.4
Doebley, J.5
Gaut, B.S.6
-
39
-
-
0033594895
-
Colinearity and its exceptions in orthologous adh regions of maize and sorghum
-
Tikhonov AP, SanMiguel PJ, Nakajima Y, Gorenstein NM, Bermetzen JL, Avramova Z (1999) Colinearity and its exceptions in orthologous adh regions of maize and sorghum. Proc Natl Acad Sci USA 96:7409-7414
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 7409-7414
-
-
Tikhonov, A.P.1
SanMiguel, P.J.2
Nakajima, Y.3
Gorenstein, N.M.4
Bermetzen, J.L.5
Avramova, Z.6
-
40
-
-
0033780104
-
How many diseases does it take to map a gene with SNPs?
-
Weiss K, Terwilliger J (2000) How many diseases does it take to map a gene with SNPs? Nat Genet 26:151-157
-
(2000)
Nat Genet
, vol.26
, pp. 151-157
-
-
Weiss, K.1
Terwilliger, J.2
-
41
-
-
0032712146
-
The molecular evolution of terminal ear 1, a regulatory gene in the genus Zea
-
White SE, Doebley JF (1999) The molecular evolution of terminal ear 1, a regulatory gene in the genus Zea. Genetics 153:1455-1462
-
(1999)
Genetics
, vol.153
, pp. 1455-1462
-
-
White, S.E.1
Doebley, J.F.2
|