-
1
-
-
18444369013
-
The structure of haplotype blocks in the human genome
-
S.B. Gabriel The structure of haplotype blocks in the human genome Science 296 2002 2225 2229
-
(2002)
Science
, vol.296
, pp. 2225-2229
-
-
Gabriel, S.B.1
-
2
-
-
0030872838
-
PolyPhred: Automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing
-
D.A. Nickerson PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing Nucleic Acids Res. 25 1997 2745 2751
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2745-2751
-
-
Nickerson, D.A.1
-
3
-
-
0036189913
-
Genotyping of SNPs in a polyploid genome by pyrosequencing™
-
A.M. Rickert Genotyping of SNPs in a polyploid genome by pyrosequencing™ BioTechniques 32 2002 592 603
-
(2002)
BioTechniques
, vol.32
, pp. 592-603
-
-
Rickert, A.M.1
-
4
-
-
0036682101
-
Single nucleotide polymorphism seeking long term association with complex disease
-
B.W. Kirk Single nucleotide polymorphism seeking long term association with complex disease Nucleic Acids Res. 30 2002 3295 3311
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3295-3311
-
-
Kirk, B.W.1
-
5
-
-
0035776497
-
Methods for genotyping single nucleotide polymorphisms
-
P.Y. Kwok Methods for genotyping single nucleotide polymorphisms Annu. Rev. Genome Hum. Genet. 2 2001 235 258
-
(2001)
Annu. Rev. Genome Hum. Genet.
, vol.2
, pp. 235-258
-
-
Kwok, P.Y.1
-
6
-
-
3142753515
-
First-generation SNP/InDel markers tagging loci for pathogen resistance in the potato genome
-
A.M. Rickert First-generation SNP/InDel markers tagging loci for pathogen resistance in the potato genome Plant Biotechnol. J. 1 2003 399 410
-
(2003)
Plant Biotechnol. J.
, vol.1
, pp. 399-410
-
-
Rickert, A.M.1
-
7
-
-
3142703727
-
Mapping genes for resistance to Verticillium albo-atrum in tetraploid and diploid potato populations using haplotype association test and genetic linkage analysis
-
I. Simko Mapping genes for resistance to Verticillium albo-atrum in tetraploid and diploid potato populations using haplotype association test and genetic linkage analysis Mol. Genet. Genomics 271 2004 522 531
-
(2004)
Mol. Genet. Genomics
, vol.271
, pp. 522-531
-
-
Simko, I.1
-
8
-
-
0141678039
-
Genome-level evolution of resistance genes in Arabidopsis thaliana
-
A. Baumgarten Genome-level evolution of resistance genes in Arabidopsis thaliana Genetics 165 2003 309 319
-
(2003)
Genetics
, vol.165
, pp. 309-319
-
-
Baumgarten, A.1
-
9
-
-
0035756174
-
High-throughput identification, database storage and analysis of SNPs in EST sequences
-
F.J. Useche High-throughput identification, database storage and analysis of SNPs in EST sequences Genome Inform. Ser. Workshop Genome Inform. 12 2001 194 203
-
(2001)
Genome Inform. Ser. Workshop Genome Inform.
, vol.12
, pp. 194-203
-
-
Useche, F.J.1
-
10
-
-
0346373740
-
Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags
-
K. Mochida Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags Mol. Genet. Genomics 270 2003 371 377
-
(2003)
Mol. Genet. Genomics
, vol.270
, pp. 371-377
-
-
Mochida, K.1
-
11
-
-
85183789789
-
Discovery of single nucleotide polymorphisms in Lycopersicon esculentum by computer aided analysis of expressed sequence tags
-
(in press)
-
Yang, W. et al. Discovery of single nucleotide polymorphisms in Lycopersicon esculentum by computer aided analysis of expressed sequence tags. Mol. Breed. (in press)
-
Mol. Breed.
-
-
Yang, W.1
-
12
-
-
12244291895
-
Comparative analyses of potato expressed sequence tag libraries
-
C.M. Ronning Comparative analyses of potato expressed sequence tag libraries Plant Physiol. 131 2003 419 429
-
(2003)
Plant Physiol.
, vol.131
, pp. 419-429
-
-
Ronning, C.M.1
-
13
-
-
0037460985
-
TIGR gene indices clustering tools (TGICL): A software system for fast clustering of large EST datasets
-
G. Pertea TIGR gene indices clustering tools (TGICL): a software system for fast clustering of large EST datasets Bioinformatics 19 2003 651 652
-
(2003)
Bioinformatics
, vol.19
, pp. 651-652
-
-
Pertea, G.1
-
14
-
-
0035165581
-
The TIGR gene indices: Analysis of gene transcript sequences in highly sampled eukaryotic species
-
J. Quackenbush The TIGR gene indices: analysis of gene transcript sequences in highly sampled eukaryotic species Nucleic Acids Res. 29 2001 159 164
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 159-164
-
-
Quackenbush, J.1
-
15
-
-
0035058585
-
Haplotypes vs single marker linkage disequilibrium tests: What do we gain?
-
J. Akey Haplotypes vs single marker linkage disequilibrium tests: what do we gain? Eur. J. Hum. Genet. 9 2001 291 300
-
(2001)
Eur. J. Hum. Genet.
, vol.9
, pp. 291-300
-
-
Akey, J.1
-
16
-
-
0034930262
-
The relative power of SNPs and haplotype as genetic markers for association tests
-
J.S. Bader The relative power of SNPs and haplotype as genetic markers for association tests Pharmacogenomics 2 2001 11 24
-
(2001)
Pharmacogenomics
, vol.2
, pp. 11-24
-
-
Bader, J.S.1
-
17
-
-
0038744804
-
SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
-
A. Ching SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines BMC Genet. 3 2002 19
-
(2002)
BMC Genet.
, vol.3
, pp. 19
-
-
Ching, A.1
-
18
-
-
0037355118
-
Single nucleotide polymorphisms (SNPs) in soybean
-
Y.L. Zhu Single nucleotide polymorphisms (SNPs) in soybean Genetics 163 2003 1123 1134
-
(2003)
Genetics
, vol.163
, pp. 1123-1134
-
-
Zhu, Y.L.1
-
19
-
-
0025269067
-
Inference of haplotypes from PCR-amplified samples of diploid populations
-
A.G. Clark Inference of haplotypes from PCR-amplified samples of diploid populations Mol. Biol. Evol. 7 1990 111 122
-
(1990)
Mol. Biol. Evol.
, vol.7
, pp. 111-122
-
-
Clark, A.G.1
-
20
-
-
0035071957
-
A new statistical method for haplotype reconstruction from population data
-
M. Stephens A new statistical method for haplotype reconstruction from population data Am. J. Hum. Genet. 68 2001 978 989
-
(2001)
Am. J. Hum. Genet.
, vol.68
, pp. 978-989
-
-
Stephens, M.1
-
21
-
-
0029130796
-
Maximum-likelihood-estimation of molecular haplotype frequencies in a diploid population
-
L. Excoffier, and M. Slatkin Maximum-likelihood-estimation of molecular haplotype frequencies in a diploid population Mol. Biol. Evol. 12 1995 921 927
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 921-927
-
-
Excoffier, L.1
Slatkin, M.2
-
22
-
-
2942572999
-
Optimal step length EM algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping
-
P.S. Zhang Optimal step length EM algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping BMC Bioinformatics 4 2003 3
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 3
-
-
Zhang, P.S.1
-
23
-
-
0037320552
-
Estimation of haplotype frequencies, linkage-disequilibrium measures, and combination of haplotype copies in each pool by use of pooled DNA data
-
T. Ito Estimation of haplotype frequencies, linkage-disequilibrium measures, and combination of haplotype copies in each pool by use of pooled DNA data Am. J. Hum. Genet. 72 2003 384 398
-
(2003)
Am. J. Hum. Genet.
, vol.72
, pp. 384-398
-
-
Ito, T.1
-
24
-
-
0032706623
-
A general approach to single-nucleotide polymorphism discovery
-
G.T. Marth A general approach to single-nucleotide polymorphism discovery Nat. Genet. 23 1999 452 456
-
(1999)
Nat. Genet.
, vol.23
, pp. 452-456
-
-
Marth, G.T.1
-
25
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
J.K. Pritchard Inference of population structure using multilocus genotype data Genetics 155 2000 945 959
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
-
26
-
-
0842330762
-
Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato (Solanum tuberosum) through a candidate gene approach
-
I. Simko Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato (Solanum tuberosum) through a candidate gene approach Theor. Appl. Genet. 108 2004 217 224
-
(2004)
Theor. Appl. Genet.
, vol.108
, pp. 217-224
-
-
Simko, I.1
-
27
-
-
0035949653
-
Structure of linkage disequilibrium and phenotypic associations in the maize genome
-
D.L. Remington Structure of linkage disequilibrium and phenotypic associations in the maize genome Proc. Natl. Acad. Sci. U. S. A. 98 2001 11479 11484
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 11479-11484
-
-
Remington, D.L.1
-
28
-
-
0041817568
-
Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
-
D. Falush Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies Genetics 164 2003 1567 1587
-
(2003)
Genetics
, vol.164
, pp. 1567-1587
-
-
Falush, D.1
-
29
-
-
0032754393
-
Founding clones, major contributing ancestors, and exotic progenitors of prominent North American potato cultivars
-
S.L. Love Founding clones, major contributing ancestors, and exotic progenitors of prominent North American potato cultivars Am. J. Potato Res. 76 1999 263 272
-
(1999)
Am. J. Potato Res.
, vol.76
, pp. 263-272
-
-
Love, S.L.1
-
30
-
-
0001163144
-
Genetic relationship among potato cultivars grown in the United States
-
H.A. Mendoza, and F.L. Haynes Genetic relationship among potato cultivars grown in the United States HortScience 9 1974 328 330
-
(1974)
HortScience
, vol.9
, pp. 328-330
-
-
Mendoza, H.A.1
Haynes, F.L.2
-
31
-
-
0008305836
-
Genetic poverty of the potato in Europe
-
(Zeven, A.C. and van Harten, A.M. eds), Pudoc, Wageningen, The Netherlands
-
Hawkes, J.G. (1978) Genetic poverty of the potato in Europe. In Broadening the Genetic Base of Crops (Zeven, A.C. and van Harten, A.M. eds), pp. 19-27, Pudoc, Wageningen, The Netherlands
-
(1978)
Broadening the Genetic Base of Crops
, pp. 19-27
-
-
Hawkes, J.G.1
-
32
-
-
1242265516
-
Assessing genetic potential in germ plasm collections of crop plants by marker-trait association: A case study for potatoes with quantitative variation of resistance to late blight and maturity type
-
C. Gebhardt Assessing genetic potential in germ plasm collections of crop plants by marker-trait association: a case study for potatoes with quantitative variation of resistance to late blight and maturity type Mol. Breed. 13 2004 93 102
-
(2004)
Mol. Breed.
, vol.13
, pp. 93-102
-
-
Gebhardt, C.1
-
33
-
-
0035185344
-
Detecting association in a case-control study while correcting for population stratification
-
D.E. Reich, and D.B. Goldstein Detecting association in a case-control study while correcting for population stratification Genet. Epidemiol. 20 2001 4 16
-
(2001)
Genet. Epidemiol.
, vol.20
, pp. 4-16
-
-
Reich, D.E.1
Goldstein, D.B.2
-
34
-
-
0032714352
-
Genomic control for association studies
-
B. Devlin, and K. Roeder Genomic control for association studies Biometrics 55 1999 997 1004
-
(1999)
Biometrics
, vol.55
, pp. 997-1004
-
-
Devlin, B.1
Roeder, K.2
-
35
-
-
0033926805
-
Association mapping in structured populations
-
J.K. Pritchard Association mapping in structured populations Am. J. Hum. Genet. 67 2000 170 181
-
(2000)
Am. J. Hum. Genet.
, vol.67
, pp. 170-181
-
-
Pritchard, J.K.1
-
36
-
-
0034931677
-
Dwarf8 polymorphisms associate with variation in flowering time
-
J.M. Thornsberry Dwarf8 polymorphisms associate with variation in flowering time Nat. Genet. 28 2001 286 289
-
(2001)
Nat. Genet.
, vol.28
, pp. 286-289
-
-
Thornsberry, J.M.1
-
37
-
-
0037648359
-
Control of confounding of genetic associations in stratified populations
-
C.J. Hoggart Control of confounding of genetic associations in stratified populations Am. J. Hum. Genet. 72 2003 1492 1504
-
(2003)
Am. J. Hum. Genet.
, vol.72
, pp. 1492-1504
-
-
Hoggart, C.J.1
-
38
-
-
0037442092
-
Population stratification and spurious allelic association
-
L.R. Cardon, and L.J. Palmer Population stratification and spurious allelic association Lancet 361 2003 598 604
-
(2003)
Lancet
, vol.361
, pp. 598-604
-
-
Cardon, L.R.1
Palmer, L.J.2
-
39
-
-
0033786787
-
Linkage disequilibrium and the search for complex disease genes
-
L.B. Jorde Linkage disequilibrium and the search for complex disease genes Genome Res. 10 2000 1435 1444
-
(2000)
Genome Res.
, vol.10
, pp. 1435-1444
-
-
Jorde, L.B.1
-
40
-
-
0035206289
-
Using complex plant pedigrees to map valuable genes
-
J.L. Jannink Using complex plant pedigrees to map valuable genes Trends Plant Sci. 6 2001 337 342
-
(2001)
Trends Plant Sci.
, vol.6
, pp. 337-342
-
-
Jannink, J.L.1
-
41
-
-
0034792463
-
Organization of genes controlling disease resistance in the potato genome
-
C. Gebhardt, and J.P.T. Valkonen Organization of genes controlling disease resistance in the potato genome Annu. Rev. Phytopathol. 39 2001 79 102
-
(2001)
Annu. Rev. Phytopathol.
, vol.39
, pp. 79-102
-
-
Gebhardt, C.1
Valkonen, J.P.T.2
-
42
-
-
0036221930
-
Comparative analysis of quantitative trait loci for foliage resistance to Phytophthora infestans in tuber-bearing Solanum species
-
I. Simko Comparative analysis of quantitative trait loci for foliage resistance to Phytophthora infestans in tuber-bearing Solanum species Am. J. Potato Res. 79 2002 125 132
-
(2002)
Am. J. Potato Res.
, vol.79
, pp. 125-132
-
-
Simko, I.1
-
43
-
-
0032701458
-
Linkage disequilibrium among modern sugarcane cultivars
-
N. Jannoo Linkage disequilibrium among modern sugarcane cultivars Theor. Appl. Genet. 99 1999 1053 1060
-
(1999)
Theor. Appl. Genet.
, vol.99
, pp. 1053-1060
-
-
Jannoo, N.1
-
44
-
-
0033840165
-
Linkage disequilibrium and fingerprinting in sugar beet
-
T. Kraft Linkage disequilibrium and fingerprinting in sugar beet Theor. Appl. Genet. 101 2000 323 326
-
(2000)
Theor. Appl. Genet.
, vol.101
, pp. 323-326
-
-
Kraft, T.1
-
45
-
-
0035979181
-
Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp mays L.)
-
M.I. Tenaillon Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp mays L.) Proc. Natl. Acad. Sci. U. S. A. 98 2001 9161 9166
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 9161-9166
-
-
Tenaillon, M.I.1
-
46
-
-
1642473027
-
Corn and humans: Recombination and linkage disequilibrium in two genomes of similar size
-
A. Rafalski, and M. Morgante Corn and humans: recombination and linkage disequilibrium in two genomes of similar size Trends Genet. 20 2004 103 111
-
(2004)
Trends Genet.
, vol.20
, pp. 103-111
-
-
Rafalski, A.1
Morgante, M.2
-
47
-
-
0036008763
-
Plant molecular diversity and applications to genomics
-
E.S. Buckler, and J.M. Thornsberry Plant molecular diversity and applications to genomics Curr. Opin. Plant Biol. 5 2002 107 111
-
(2002)
Curr. Opin. Plant Biol.
, vol.5
, pp. 107-111
-
-
Buckler, E.S.1
Thornsberry, J.M.2
-
48
-
-
0142135662
-
Structure of linkage disequilibrium in plants
-
S.A. Flint-Garcia Structure of linkage disequilibrium in plants Annu. Rev. Plant Biol. 54 2003 357 374
-
(2003)
Annu. Rev. Plant Biol.
, vol.54
, pp. 357-374
-
-
Flint-Garcia, S.A.1
-
49
-
-
0036008761
-
Applications of single nucleotide polymorphisms in crop genetics
-
A. Rafalski Applications of single nucleotide polymorphisms in crop genetics Curr. Opin. Plant Biol. 5 2002 94 100
-
(2002)
Curr. Opin. Plant Biol.
, vol.5
, pp. 94-100
-
-
Rafalski, A.1
-
50
-
-
0036186213
-
Novel genetic mapping tools in plants: SNPs and LD-based approaches
-
J.A. Rafalski Novel genetic mapping tools in plants: SNPs and LD-based approaches Plant Sci. 162 2002 329 333
-
(2002)
Plant Sci.
, vol.162
, pp. 329-333
-
-
Rafalski, J.A.1
|