Thermodynamics of aminoglycoside-rRNA recognition

Biopolymers

Volumn 70, Issue 1, 2003, Pages 58-79

  Pilch, Daniel S ^a,b   Kaul, Malvika ^a   Barbieri, Christopher M ^a   Kerrigan, John E ^b,c  

^a RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

^b RUTGERS CANCER INSTITUTE OF NEW JERSEY   (United States)

^c UNIVERSITY OF MEDICINE AND DENTISTRY OF NEW JERSEY   (United States)

Author keywords

Binding induced drug protonation; Calorimetry; Drug RNA interactions; Free energy; Heat capacity; Hydration; Major groove binders; Molecular dynamics; Osmotic stress; Polyelectrolyte effect

Indexed keywords

ANTIBIOTICS; BACTERIA; BINDING ENERGY; FREE ENERGY; HYDRATION; HYDROGEN BONDS; MOLECULAR STRUCTURE; THERMODYNAMICS;

BROAD SPECTRUM ANTIBIOTICS;

RNA;

AMIKACIN; AMINOGLYCOSIDE ANTIBIOTIC AGENT; ANTIBIOTIC AGENT; CACODYLIC ACID; GENTAMICIN; KANAMYCIN A; KANAMYCIN B; LIVIDOMYCIN; NEOMYCIN; OLIGONUCLEOTIDE; PAROMOMYCIN; RIBOSTAMYCIN; RNA;

AEROBIC BACTERIUM; ANTIMICROBIAL ACTIVITY; ARTICLE; BINDING AFFINITY; BINDING COMPETITION; BINDING SITE; CALORIMETRY; CHEMICAL REACTION KINETICS; COMPUTER PREDICTION; CONFORMATIONAL TRANSITION; DATA BASE; DRUG BINDING SITE; DRUG DESIGN; DRUG PROTEIN BINDING; DRUG SPECIFICITY; DRUG TARGETING; ELECTROLYTE BALANCE; ENERGY TRANSFER; EVALUATION; GRAM NEGATIVE INFECTION; HYDRATION; HYDROGEN BOND; MATHEMATICAL COMPUTING; MOLECULAR INTERACTION; MOLECULAR MODEL; MOLECULAR RECOGNITION; OSMOTIC STRESS; PROTEIN DOMAIN; PROTEIN RNA BINDING; PROTON TRANSPORT; REACTION ANALYSIS; RIBOSOME; RNA BINDING; RNA BINDING SITE; SPECTROSCOPY; STRUCTURE ANALYSIS; THERMODYNAMICS; VAN DER WAALS INTERACTION;

AMINOGLYCOSIDES; ANTI-BACTERIAL AGENTS; BASE SEQUENCE; CALORIMETRY; COMPUTER SIMULATION; DATABASES; ELECTROLYTES; HYDROGEN BONDING; HYDROGEN-ION CONCENTRATION; KINETICS; MODELS, CHEMICAL; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NEOMYCIN; NUCLEIC ACID CONFORMATION; OSMOSIS; PAROMOMYCIN; RNA; RNA, RIBOSOMAL; SALTS; SPECTROPHOTOMETRY; TEMPERATURE; THERMODYNAMICS;

BACILLI; NEGIBACTERIA;

EID: 0041335577     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/bip.10411     Document Type: Article

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