-
2
-
-
0030040661
-
Direct visualization of A-, P-, and E-site transfer RNAs in the Escherichia coli ribosome
-
Agrawal, R. K. et al. Direct visualization of A-, P-, and E-site transfer RNAs in the Escherichia coli ribosome. Science 271, 1000-1002 (1996).
-
(1996)
Science
, vol.271
, pp. 1000-1002
-
-
Agrawal, R.K.1
-
3
-
-
0030887834
-
Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy
-
Stark, H. et al. Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy. Cell 88, 19-28 (1997).
-
(1997)
Cell
, vol.88
, pp. 19-28
-
-
Stark, H.1
-
4
-
-
0027104840
-
Translational accuracy and the fitness of bacteria
-
Kurland, C. G. Translational accuracy and the fitness of bacteria. Annu. Rev. Genet. 26, 29-50 (1992).
-
(1992)
Annu. Rev. Genet.
, vol.26
, pp. 29-50
-
-
Kurland, C.G.1
-
5
-
-
0032535207
-
Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome
-
Pape, T., Wintermeyer, W. & Rodnina, M. V. Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome. EMBO J. 17, 7490-7497 (1998).
-
(1998)
EMBO J.
, vol.17
, pp. 7490-7497
-
-
Pape, T.1
Wintermeyer, W.2
Rodnina, M.V.3
-
6
-
-
0033168212
-
Induced fit in initial selection and proof-reading of aminoacyl-tRNA on the ribosome
-
Pape, T., Wintermeyer, W. & Rodnina, M. Induced fit in initial selection and proof-reading of aminoacyl-tRNA on the ribosome. EMBO J. 18, 3800-3807 (1999).
-
(1999)
EMBO J.
, vol.18
, pp. 3800-3807
-
-
Pape, T.1
Wintermeyer, W.2
Rodnina, M.3
-
7
-
-
0033961143
-
Conformational switch in the decoding region of 16S rRNA during aminoacyl-tRNA selection on the ribosome
-
Pape, T., Wintermeyer, W. & Rodnina, M. V. Conformational switch in the decoding region of 16S rRNA during aminoacyl-tRNA selection on the ribosome. Nature Struct. Biol. 7, 104-107 (2000).
-
(2000)
Nature Struct. Biol.
, vol.7
, pp. 104-107
-
-
Pape, T.1
Wintermeyer, W.2
Rodnina, M.V.3
-
8
-
-
0033571249
-
Major rearrangements in the 70S ribosomal 3D structure caused by a conformational switch in 16S ribosomal RNA
-
Gabashvili, I. S. et al. Major rearrangements in the 70S ribosomal 3D structure caused by a conformational switch in 16S ribosomal RNA. EMBO J. 18, 6501-6507 (1999).
-
(1999)
EMBO J.
, vol.18
, pp. 6501-6507
-
-
Gabashvili, I.S.1
-
9
-
-
0025280137
-
The allosteric three-site model for the ribosomal elongation cycle: features and future
-
Nierhaus, K. H. The allosteric three-site model for the ribosomal elongation cycle: features and future. Biochemistry 29, 4997-5008 (1990).
-
(1990)
Biochemistry
, vol.29
, pp. 4997-5008
-
-
Nierhaus, K.H.1
-
10
-
-
0024420980
-
Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA
-
Allen, P. N. & Noller, H. F. Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA. J. Mol. Biol. 208, 457-468 (1989).
-
(1989)
J. Mol. Biol.
, vol.208
, pp. 457-468
-
-
Allen, P.N.1
Noller, H.F.2
-
11
-
-
0030806152
-
A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA
-
Lodmell, J. S. & Dahlberg, A. E. A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA. Science 277, 1262-1267 (1997).
-
(1997)
Science
, vol.277
, pp. 1262-1267
-
-
Lodmell, J.S.1
Dahlberg, A.E.2
-
12
-
-
0034699518
-
Structure of the 30S ribosomal subunit
-
Wimberly, B. T. et al. Structure of the 30S ribosomal subunit. Nature 407, 327-339 (2000).
-
(2000)
Nature
, vol.407
, pp. 327-339
-
-
Wimberly, B.T.1
-
13
-
-
0030801742
-
A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. I. Fitting the RNA to a 3D electron microscopic map at 20 Å
-
Mueller, F. & Brimacombe, R. A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. I. Fitting the RNA to a 3D electron microscopic map at 20 Å. J. Mol. Biol. 271, 524-544 (1997).
-
(1997)
J. Mol. Biol.
, vol.271
, pp. 524-544
-
-
Mueller, F.1
Brimacombe, R.2
-
14
-
-
0032881809
-
X-ray crystal structures of 70S ribosome functional complexes
-
Gate, J. H., Yusupov, M. M., Yusupova, G. Z., Earnest, T. N. & Noller, H. F. X-ray crystal structures of 70S ribosome functional complexes. Science 285, 2095-2104 (1999).
-
(1999)
Science
, vol.285
, pp. 2095-2104
-
-
Gate, J.H.1
Yusupov, M.M.2
Yusupova, G.Z.3
Earnest, T.N.4
Noller, H.F.5
-
15
-
-
0034691576
-
A ratchet-like inter-subunit reorganization of the ribosome during translocation
-
Frank, J. & Agrawal, R. K. A ratchet-like inter-subunit reorganization of the ribosome during translocation. Nature 406, 319-322 (2000).
-
(2000)
Nature
, vol.406
, pp. 319-322
-
-
Frank, J.1
Agrawal, R.K.2
-
16
-
-
0034603196
-
Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation
-
Stark, H., Rodnina, M. V., Wieden, H. I., van Heel, M. & Wintermeyer, W. Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation. Cell 100, 301-309 (2000).
-
(2000)
Cell
, vol.100
, pp. 301-309
-
-
Stark, H.1
Rodnina, M.V.2
Wieden, H.I.3
Van Heel, M.4
Wintermeyer, W.5
-
17
-
-
0025070318
-
Binding of tRNa to the ribosomal a and P sites protects two distinct sets of nucleotides in 16 S rRNA
-
Moazed, D. & Noller, H. F. Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA. J. Mol. Biol. 211, 135-145 (1990).
-
(1990)
J. Mol. Biol.
, vol.211
, pp. 135-145
-
-
Moazed, D.1
Noller, H.F.2
-
18
-
-
0020364218
-
Covalent crosslinking of tRNA1Val to 16S RNA at the ribosomal P site: identification of crosslinked residues
-
Prince, J. B., Taylor, B. H., Thurlow, D. L., Ofengand, J. & Zimmermann, R. A. Covalent crosslinking of tRNA1Val to 16S RNA at the ribosomal P site: identification of crosslinked residues. Proc. Natl Acad. Sci. USA 79, 5450-5454 (1982).
-
(1982)
Proc. Natl Acad. Sci. USA
, vol.79
, pp. 5450-5454
-
-
Prince, J.B.1
Taylor, B.H.2
Thurlow, D.L.3
Ofengand, J.4
Zimmermann, R.A.5
-
19
-
-
0028929659
-
Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site
-
von Ahsen, U. & Noller, H. F. Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site. Science 267, 234-237 (1995).
-
(1995)
Science
, vol.267
, pp. 234-237
-
-
Von Ahsen, U.1
Noller, H.F.2
-
20
-
-
0030824580
-
A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. III. the topography of the functional centre
-
Mueller, F., Stark, H., van Heel, M., Rinke-Appel, J. & Brimacombe, R. A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. III. The topography of the functional centre. J. Mol. Biol. 271, 566-587 (1997).
-
(1997)
J. Mol. Biol.
, vol.271
, pp. 566-587
-
-
Mueller, F.1
Stark, H.2
Van Heel, M.3
Rinke-Appel, J.4
Brimacombe, R.5
-
22
-
-
0000190405
-
-
(eds Neidhardt, F. C. et al.) ASM, Washington DC
-
Kurland, C. G., Hughes, D., Ehrenberg, M. in Limitations of Translational Accuracy (eds Neidhardt, F. C. et al.) 979-1003 (ASM, Washington DC, 1996).
-
(1996)
Limitations of Translational Accuracy
, pp. 979-1003
-
-
Kurland, C.G.1
Hughes, D.2
Ehrenberg, M.3
-
23
-
-
0025008960
-
Ribosomal RNA and protein mutants resistant to spectinomycin
-
Bilgin, N., Richter, A. A., Ehrenberg, M., Dahlberg, A. E. & Kurland, C. G. Ribosomal RNA and protein mutants resistant to spectinomycin. EMBO J. 9, 735-739 (1990).
-
(1990)
EMBO J.
, vol.9
, pp. 735-739
-
-
Bilgin, N.1
Richter, A.A.2
Ehrenberg, M.3
Dahlberg, A.E.4
Kurland, C.G.5
-
24
-
-
0023238983
-
Interaction of antibiotics with functional sites in 16S ribosomal RNA
-
Moazed, D. & Noller, H. F. Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature 327, 389-394 (1987).
-
(1987)
Nature
, vol.327
, pp. 389-394
-
-
Moazed, D.1
Noller, H.F.2
-
25
-
-
0028359389
-
Spectinomycin interacts specifically with the residues G1064 and C1192 in 16S rRNA, thereby potentially freezing this molecule into an inactive conformation
-
Brink, M. F., Brink, G., Verbeet, M. P. & de Boer, H. A. Spectinomycin interacts specifically with the residues G1064 and C1192 in 16S rRNA, thereby potentially freezing this molecule into an inactive conformation. Nucleic Acids Res. 22, 325-331 (1994).
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 325-331
-
-
Brink, M.F.1
Brink, G.2
Verbeet, M.P.3
De Boer, H.A.4
-
26
-
-
0018169695
-
The primary structure of protein S5 from the small subunit of the Escherichia coli ribosome
-
Wittmann-Liebold, B. & Greuer, B. The primary structure of protein S5 from the small subunit of the Escherichia coli ribosome. FEBS Lett. 95, 91-98 (1978).
-
(1978)
FEBS Lett.
, vol.95
, pp. 91-98
-
-
Wittmann-Liebold, B.1
Greuer, B.2
-
27
-
-
0021710384
-
Streptomycin preferentially perturbs ribosomal proofreading
-
Ruusala, T. & Kurland, C. G. Streptomycin preferentially perturbs ribosomal proofreading. Mol. Gen. Genet. 198, 100-104 (1984).
-
(1984)
Mol. Gen. Genet.
, vol.198
, pp. 100-104
-
-
Ruusala, T.1
Kurland, C.G.2
-
28
-
-
0027988447
-
Dissociation rate of cognate peptidyl-tRNA from the A-site of hyperaccurate and error-prone ribosomes
-
Karimi, R. & Ehrenberg, M. Dissociation rate of cognate peptidyl-tRNA from the A-site of hyperaccurate and error-prone ribosomes. Eur. J. Biochem. 226, 355-360 (1994).
-
(1994)
Eur. J. Biochem.
, vol.226
, pp. 355-360
-
-
Karimi, R.1
Ehrenberg, M.2
-
29
-
-
0029986817
-
Dissociation rates of peptidyl-tRNA from the P-site of E. coli ribosomes
-
Karimi, R. & Ehrenberg, M. Dissociation rates of peptidyl-tRNA from the P-site of E. coli ribosomes. EMBO J. 15, 1149-1154 (1996).
-
(1996)
EMBO J.
, vol.15
, pp. 1149-1154
-
-
Karimi, R.1
Ehrenberg, M.2
-
30
-
-
0028078797
-
Mutations in 23 S ribosomal RNA perturb transfer RNA selection and can lead to streptomycin dependence
-
Bilgin, N. & Ehrenberg, M. Mutations in 23 S ribosomal RNA perturb transfer RNA selection and can lead to streptomycin dependence. J. Mol. Biol. 235, 813-824 (1994).
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 813-824
-
-
Bilgin, N.1
Ehrenberg, M.2
-
31
-
-
0023226742
-
Cross-linking of streptomycin to the 16S ribosomal RNA of Escherichia coli
-
Gravel, M., Melancon, P. & Brakier-Gingras, L. Cross-linking of streptomycin to the 16S ribosomal RNA of Escherichia coli. Biochemistry 26, 6227-6232 (1987).
-
(1987)
Biochemistry
, vol.26
, pp. 6227-6232
-
-
Gravel, M.1
Melancon, P.2
Brakier-Gingras, L.3
-
32
-
-
0023054135
-
E. coli ribosomes with a C912 to U base change in the 16S rRNa are streptomycin resistant
-
Montandon, P. E., Wagner, R. & Stutz, E. E. coli ribosomes with a C912 to U base change in the 16S rRNA are streptomycin resistant. EMBO J. 5, 3705-3708 (1986).
-
(1986)
EMBO J.
, vol.5
, pp. 3705-3708
-
-
Montandon, P.E.1
Wagner, R.2
Stutz, E.3
-
33
-
-
0027441282
-
The 5′ proximal helix of 16S rRNA is involved in the binding of streptomycin to the ribosome
-
Pinard, R., Payant, C., Melancon, P. & Brakier-Gingras, L. The 5′ proximal helix of 16S rRNA is involved in the binding of streptomycin to the ribosome. FASEB J. 7, 173-176 (1993).
-
(1993)
FASEB J.
, vol.7
, pp. 173-176
-
-
Pinard, R.1
Payant, C.2
Melancon, P.3
Brakier-Gingras, L.4
-
34
-
-
0023689711
-
A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin
-
Melancon, P., Lemieux, C. & Brakier-Gingras, L. A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin. Nucleic Acids Res. 16, 9631-9639 (1988).
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 9631-9639
-
-
Melancon, P.1
Lemieux, C.2
Brakier-Gingras, L.3
-
35
-
-
0022432246
-
Streptomycin-resistance of Euglena gracilis chloroplasts: identification of a point mutation in the 16S rRNa gene in an invariant position
-
Montandon, P. E., Nicolas, P., Schurmann, P. & Stutz, E. Streptomycin-resistance of Euglena gracilis chloroplasts: identification of a point mutation in the 16S rRNA gene in an invariant position. Nucleic Acids Res. 13, 4299-4310 (1985).
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 4299-4310
-
-
Montandon, P.E.1
Nicolas, P.2
Schurmann, P.3
Stutz, E.4
-
36
-
-
0025916683
-
Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome
-
Leclerc, D., Melancon, P. & Brakier-Gingras, L. Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome. Nucleic Acids Res. 19, 3973-3977 (1991).
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 3973-3977
-
-
Leclerc, D.1
Melancon, P.2
Brakier-Gingras, L.3
-
37
-
-
0021766670
-
Cross-linking of streptomycin to the 30S subunit of Escherichia coli with phenyldiglyoxal
-
Melancon, P., Boileau, G. & Brakier-Gingras, L. Cross-linking of streptomycin to the 30S subunit of Escherichia coli with phenyldiglyoxal. Biochemistry 23, 6697-6703 (1984).
-
(1984)
Biochemistry
, vol.23
, pp. 6697-6703
-
-
Melancon, P.1
Boileau, G.2
Brakier-Gingras, L.3
-
38
-
-
0025737972
-
A functional pseudoknot in 16S ribosomal RNA
-
Powers, T. & Noller, H. F. A functional pseudoknot in 16S ribosomal RNA. EMBO J. 10, 2203-2214 (1991).
-
(1991)
EMBO J.
, vol.10
, pp. 2203-2214
-
-
Powers, T.1
Noller, H.F.2
-
39
-
-
0018290018
-
Ribosomal ambiguity (ram) mutations facilitate diyhydrostreptomycin binding to ribosomes
-
Bock, A., Petzet, A. & Piepersberg, W. Ribosomal ambiguity (ram) mutations facilitate diyhydrostreptomycin binding to ribosomes. FEBS Lett. 104, 317-321 (1979).
-
(1979)
FEBS Lett.
, vol.104
, pp. 317-321
-
-
Bock, A.1
Petzet, A.2
Piepersberg, W.3
-
40
-
-
0029745623
-
Throwing a spanner in the works: antibiotics and the translation apparatus
-
Spahn, C. M. & Prescott, C. D. Throwing a spanner in the works: antibiotics and the translation apparatus. J. Mol. Med. 74, 423-439 (1996).
-
(1996)
J. Mol. Med.
, vol.74
, pp. 423-439
-
-
Spahn, C.M.1
Prescott, C.D.2
-
41
-
-
0029825658
-
Structure of the a site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic
-
Fourmy, D., Recht, M. I., Blanchard, S. C. & Puglisi, J. D. Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic. Science 274, 1367-1371 (1996).
-
(1996)
Science
, vol.274
, pp. 1367-1371
-
-
Fourmy, D.1
Recht, M.I.2
Blanchard, S.C.3
Puglisi, J.D.4
-
42
-
-
0033543589
-
Recognition of the codon-anticodon helix by ribosomal RNA
-
Yoshizawa, S., Fourmy, D. & Puglisi, J. D. Recognition of the codon-anticodon helix by ribosomal RNA. Science 285, 1722-1725 (1999).
-
(1999)
Science
, vol.285
, pp. 1722-1725
-
-
Yoshizawa, S.1
Fourmy, D.2
Puglisi, J.D.3
-
43
-
-
0033525065
-
Major groove binding of the tRNA/mRNA complex to the 16 S ribosomal RNA decoding site
-
VanLoock, M. S., Easterwood, T. R. & Harvey, S. C. Major groove binding of the tRNA/mRNA complex to the 16 S ribosomal RNA decoding site. J. Mol. Biol. 285, 2069-2078 (1999).
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 2069-2078
-
-
Vanloock, M.S.1
Easterwood, T.R.2
Harvey, S.C.3
-
44
-
-
0031059866
-
-
(eds Carter, C. W. J. & Sweet, R. M.) Academic, New York
-
Otwinowski, Z. & Minor, W. in Methods in Enzymology (eds Carter, C. W. J. & Sweet, R. M.) 307-325 (Academic, New York, 1997).
-
(1997)
Methods in Enzymology
, pp. 307-325
-
-
Otwinowski, Z.1
Minor, W.2
-
45
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brünger, A. T. et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr D
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
-
46
-
-
0026240806
-
Ribbons 2. 0
-
Carson, M. Ribbons 2. 0. J. Appl. Cryst. 24, 958-961 (1991).
-
(1991)
J. Appl. Cryst.
, vol.24
, pp. 958-961
-
-
Carson, M.1
|