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Volumn 41, Issue 24, 2002, Pages 7695-7706

Thermodynamics of aminoglycoside-rRNA recognition: The binding of neomycin-class aminoglycosides to the A site of 16S rRNA

(2) Kaul, Malvika a Pilch, Daniel S a,b

a RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL (United States)

b RUTGERS CANCER INSTITUTE OF NEW JERSEY (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTONATION;

ANTIBIOTICS; CALORIMETRY; COMPLEXATION; ENTHALPY; ESCHERICHIA COLI; RNA; THERMODYNAMIC STABILITY;

BIOCHEMISTRY;

AMINOGLYCOSIDE; NEOMYCIN; OLIGONUCLEOTIDE; PAROMOMYCIN; RIBOSOME RNA; RIBOSTAMYCIN; SODIUM;

ARTICLE; BINDING AFFINITY; BINDING SITE; CALORIMETRY; COMPARATIVE STUDY; COMPLEX FORMATION; CONCENTRATION (PARAMETERS); DRUG BINDING; MOLECULAR STABILITY; PRIORITY JOURNAL; RNA BINDING; SPECTROSCOPY; TECHNIQUE; THERMODYNAMICS; TITRIMETRY;

ANTI-BACTERIAL AGENTS; BINDING SITES; CALORIMETRY, DIFFERENTIAL SCANNING; ELECTROSTATICS; HEAT; HYDROGEN-ION CONCENTRATION; NEOMYCIN; NUCLEIC ACID HETERODUPLEXES; OLIGONUCLEOTIDES; PAROMOMYCIN; PROTONS; QUATERNARY AMMONIUM COMPOUNDS; RIBOSTAMYCIN; RNA, RIBOSOMAL, 16S; SALTS; SODIUM; THERMODYNAMICS;

ESCHERICHIA COLI;

EID: 0037129948 PISSN: 00062960 EISSN: None Source Type: Journal
DOI: 10.1021/bi020130f Document Type: Article

Times cited : (131)

References (50)

1
- 2142802467
- (Delgado, J. N., and Remers, W. A., Eds.), Lippincott-Raven Publishers, Philadelphia
- (1998) Wilson and Gisvold's Textbook of Organic Medicinal and Pharmaceutical Chemistry , pp. 253-325
- Martin, A.R.¹

2
- 0023238983
- (1987) Nature , vol.327 , pp. 389-394
- Moazed, D.¹ Noller, H.F.²

3
- 0025799785
- (1991) EMBO J. , vol.10 , pp. 3099-3103
- Woodcock, J.¹ Moazed, D.² Cannon, M.³ Davies, J.⁴ Noller, H.F.⁵

4
- 0002751916
- (1965) Mol. Pharmacol. , vol.1 , pp. 93-106
- Davies, J.¹ Gorini, L.² Davis, B.D.³

5
- 0014429801
- (1968) J. Biol. Chem. , vol.243 , pp. 3312-3316
- Davies, J.¹ Davis, B.D.²

6
- 0029825658
- (1996) Science , vol.274 , pp. 1367-1371
- Fourmy, D.¹ Recht, M.I.² Blanchard, S.C.³ Puglisi, J.D.⁴

7
- 0032571306
- (1998) J. Mol. Biol. , vol.277 , pp. 347-362
- Fourmy, D.¹ Recht, M.I.² Puglisi, J.D.³

8
- 0032571359
- (1998) J. Mol. Biol. , vol.277 , pp. 333-345
- Fourmy, D.¹ Yoshizawa, S.² Puglisi, J.D.³

9
- 0027988447
- (1994) Eur. J. Biochem. , vol.226 , pp. 355-360
- Karimi, R.¹ Ehrenberg, M.²

10
- 0033961143
- (2000) Nat. Struct. Biol. , vol.7 , pp. 104-107
- Pape, T.¹ Wintermeyer, W.² Rodnina, M.V.³

11
- 0034699519
- (2000) Nature , vol.407 , pp. 340-348
- Carter, A.P.¹ Clemons, W.M.² Brodersen, D.E.³ Morgan-Warren, R.J.⁴ Wimberly, B.T.⁵ Ramakrishnan, V.⁶

12
- 0023406843
- (1987) Biopolymers , vol.26 , pp. 1601-1620
- Marky, L.A.¹ Breslauer, K.J.²

13
- 0015153612
- (1971) Biopolymers , vol.10 , pp. 2147-2160
- Crothers, D.M.¹

14
- 0017116135
- (1976) Biopolymers , vol.15 , pp. 1345-1375
- McGhee, J.D.¹

15
- 0020708497
- (1983) J. Am. Chem. Soc. , vol.105 , pp. 1021-1028
- Botto, R.E.¹ Coxon, B.²

16
- 0002248250
- (1958) Kyoritsu Yakka Daigaku Kenkyû Nempô , vol.4 , pp. 12-16
- Miyamoto, S.¹ Kazuko, M.²

17
- 0003573487
- Prentice-Hall, Englewood Cliffs
- (1978) Physical Chemistry: Principles and Applications in Biological Sciences
- Tinoco I., Jr.¹ Sauer, K.² Wang, J.C.³

18
- 0029131539
- (1995) Methods Enzymol. , vol.259 , pp. 183-194
- Doyle, M.L.¹ Louie, G.² Dal Monte, P.R.³ Sokoloski, T.D.⁴

19
- 0023668218
- (1987) Biochemistry , vol.26 , pp. 4063-4068
- Fukada, H.¹ Takahashi, K.² Sturtevant, J.M.³

20
- 0034886697
- (2001) Structure , vol.9 , pp. 647-658
- Vicens, Q.¹ Westhof, E.²

21
- 0026684671
- (1992) Biochemistry , vol.31 , pp. 3947-3955
- Spolar, R.S.¹ Livingstone, J.R.² Record, M.T.J.³

22
- 0027537127
- (1993) Proteins: Struct., Funct., Genet. , vol.15 , pp. 113-120
- Murphy, K.P.¹ Xie, D.² Garcia, K.C.³ Amzel, L.M.⁴ Freire, E.⁵

23
- 0031571628
- (1997) J. Mol. Biol. , vol.271 , pp. 244-257
- Haq, I.¹ Ladbury, J.E.² Chowdhry, B.Z.³ Jenkins, T.C.⁴ Chaires, J.B.⁵

24
- 0034616955
- (2000) J. Mol. Biol. , vol.300 , pp. 321-337
- Mazur, S.¹ Tanious, F.A.² Ding, D.³ Kumar, A.⁴ Boykin, D.W.⁵ Simpson, I.J.⁶ Neidle, S.⁷ Wilson, W.D.⁸

25
- 0029112951
- (1995) Methods Enzymol. , vol.259 , pp. 194-221
- Fisher, H.F.¹ Singh, N.²

26
- 4143080522
- (1998) Biopolym. Nucleic Acid Sci. , vol.44 , pp. 201-215
- Chaires, J.B.¹

27
- 0034581523
- (2000) Methods Enzymol. , vol.323 , pp. 373-405
- Haq, I.¹ Jenkins, T.C.² Chowdhry, B.Z.³ Ren, J.⁴ Chaires, J.B.⁵

28
- 18244373689
- (2000) Methods Enzymol. , vol.323 , pp. 207-230
- Doyle, M.L.¹ Brigham-Burke, M.² Blackburn, M.N.³ Brooks, I.S.⁴ Smith, T.M.⁵ Newman, R.⁶ Reff, M.⁷ Stafford W.F. III⁸ Sweet, R.W.⁹ Truneh, A.¹⁰ Hensley, P.¹¹ O'Shannessy, D.J.¹²

29
- 0037138652
- (2002) J. Am. Chem. Soc. , vol.124 , pp. 1438-1442
- Ma, C.¹ Baker, N.A.² Joseph, S.³ McCammon, J.A.⁴

30
- 0032507263
- (1998) J. Am. Chem. Soc. , vol.120 , pp. 1965-1978
- Alper, P.B.¹ Hendrix, M.² Sears, P.³ Wong, C.-H.⁴

31
- 0029131632
- (1995) Biophys. J. , vol.69 , pp. 559-568
- Gao, Y.-G.¹ Robinson, H.² Van Boom, J.H.³ Wang, A.H.-J.⁴

32
- 0030587890
- (1996) Structure , vol.4 , pp. 1221-1229
- Cate, J.H.¹ Doudna, J.A.²

33
- 0030726858
- (1997) Nucleic Acids Res. , vol.25 , pp. 4599-4607
- Adamiak, D.A.¹ Milecki, J.² Popenda, M.³ Adamiak, R.W.⁴ Dauter, Z.⁵ Rypniewski, W.R.⁶

34
- 0000115258
- (1998) J. Phys. Chem. B , vol.102 , pp. 4658-4667
- Sprous, D.¹ Young, M.A.² Beveridge, D.L.³

35
- 0032707625
- (1999) Nat. Struct. Biol. , vol.6 , pp. 1055-1061
- Chin, K.¹ Sharp, K.A.² Honig, B.³ Pyle, A.M.⁴

36
- 0033561291
- (1999) Eur. J. Biochem. , vol.261 , pp. 413-420
- Gao, Y.-G.¹ Robinson, H.H.² Wang, A.H.-J.³

37
- 0034625314
- (2000) J. Mol. Biol. , vol.299 , pp. 813-825
- Misra, V.K.¹ Draper, D.E.²

38
- 0035940358
- (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 12456-12461
- Misra, V.K.¹ Draper, D.E.²

39
- 0024424033
- (1989) EMBO J. , vol.8 , pp. 1213-1216
- DeStasio, E.A.¹ Moazed, D.² Noller, H.F.³ Dahlberg, A.E.⁴

40
- 0025305692
- (1990) J. Mol. Biol. , vol.212 , pp. 127-133
- DeStasio, E.A.¹ Dahlberg, A.E.²

41
- 0033152492
- (1999) EMBO J. , vol.18 , pp. 3133-3138
- Recht, M.I.¹ Douthwaite, S.² Puglisi, J.D.³

42
- 0035830952
- (2001) J. Mol. Biol. , vol.306 , pp. 1037-1058
- Lynch, S.R.¹ Puglisi, J.D.²

43
- 0027370433
- (1993) Cell , vol.74 , pp. 969-978
- Zapp, M.L.¹ Stern, S.² Green, M.R.³

44
- 0031005113
- (1997) Bioorg. Med. Chem. , vol.5 , pp. 1149-1155
- Zapp, M.L.¹ Young, D.W.² Kumar, A.³ Singh, R.⁴ Boykin, D.W.⁵ Wilson, W.D.⁶ Green, M.R.⁷

45
- 0032491152
- (1998) Biochemistry , vol.37 , pp. 14204-14212
- Mei, H.-Y.¹ Cui, M.² Heldsinger, A.³ Lemrow, S.M.⁴ Loo, J.A.⁵ Sannes-Lowry, K.A.⁶ Sharmeen, L.⁷ Czarnik, A.W.⁸

46
- 0032554635
- (1998) Biochemistry , vol.37 , pp. 5549-5557
- Wang, S.¹ Huber, P.W.² Cui, M.³ Czamik, A.W.⁴ Mei, H.-Y.⁵

47
- 0031772021
- (1998) Chem. Eur. J. , vol.4 , pp. 2091-2098
- Michael, K.¹ Tor, Y.²

48
- 0033152070
- (1999) Angew. Chem., Int. Ed. Engl. , vol.38 , pp. 1579-1582
- Tor, Y.¹

49
- 0034624435
- (2000) J. Am. Chem. Soc. , vol.122 , pp. 980-981
- Kirk, S.R.¹ Luedtke, N.W.² Tor, Y.³

50
- 1842388479
- (1996) J. Mol. Biol. , vol.262 , pp. 421-436
- Recht, M.I.¹ Fourmy, D.² Blanchard, S.C.³ Dahlquist, K.D.⁴ Puglisi, J.D.⁵

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