-
1
-
-
0027052468
-
FTIR study of specific binding interactions between DNA minor groove-binding ligands and polynucleotides
-
Adnet F., Liquier J., Taillandier E., Singh M. P., Rao K. E., Lown J. W. FTIR study of specific binding interactions between DNA minor groove-binding ligands and polynucleotides. J. Biomol. Struct. Dynam. 10:1992;565-575.
-
(1992)
J. Biomol. Struct. Dynam.
, vol.10
, pp. 565-575
-
-
Adnet, F.1
Liquier, J.2
Taillandier, E.3
Singh, M.P.4
Rao, K.E.5
Lown, J.W.6
-
2
-
-
0027337134
-
The different binding modes of Hoechst 33258 to DNA studied by electric linear dichroism
-
Bailly C., Colson P., Henichart J. P., Houssier C. The different binding modes of Hoechst 33258 to DNA studied by electric linear dichroism. Nucl. Acids Res. 21:1993;3705-3709.
-
(1993)
Nucl. Acids Res.
, vol.21
, pp. 3705-3709
-
-
Bailly, C.1
Colson, P.2
Henichart, J.P.3
Houssier, C.4
-
4
-
-
0030971891
-
Possible origin of differences between van't Hoff and calorimetric enthalpy estimates
-
Chaires J. B. Possible origin of differences between van't Hoff and calorimetric enthalpy estimates. Biophys. Chem. 64:1997;15-23.
-
(1997)
Biophys. Chem.
, vol.64
, pp. 15-23
-
-
Chaires, J.B.1
-
5
-
-
0022693818
-
Design of sequence-specific DNA-binding molecules
-
Dervan P. B. Design of sequence-specific DNA-binding molecules. Science. 232:1986;464-471.
-
(1986)
Science
, vol.232
, pp. 464-471
-
-
Dervan, P.B.1
-
8
-
-
0024745871
-
The price of lost freedom: Entropy of bimolecular complex formation
-
Finkelstein A. V., Janin J. The price of lost freedom: entropy of bimolecular complex formation. Protein Eng. 3:1989;1-3.
-
(1989)
Protein Eng
, vol.3
, pp. 1-3
-
-
Finkelstein, A.V.1
Janin, J.2
-
9
-
-
0027487232
-
Structure and drug interactions of parallel-stranded DNA studied by infrared spectroscopy and fluorescence
-
Fritzsch H., Akhebat A., Taillandier E., Rippe K., Jovin T. M. Structure and drug interactions of parallel-stranded DNA studied by infrared spectroscopy and fluorescence. Nucl. Acids Res. 21:1993;5085-5091.
-
(1993)
Nucl. Acids Res.
, vol.21
, pp. 5085-5091
-
-
Fritzsch, H.1
Akhebat, A.2
Taillandier, E.3
Rippe, K.4
Jovin, T.M.5
-
11
-
-
0030036162
-
Large heat capacity changes in protein-monovalent cation interactions
-
Guinto E. R., DiCera E. Large heat capacity changes in protein-monovalent cation interactions. Biochemistry. 35:1996;8800-8809.
-
(1996)
Biochemistry
, vol.35
, pp. 8800-8809
-
-
Guinto, E.R.1
DiCera, E.2
-
12
-
-
0011105901
-
Salt- and temperature-induced conformational changes of two self-complementary dodecanucleotides
-
Haq I., Senior S. J., Drake A. F., Leharne S., Chowdhry B. Z., Jenkins T. C. Salt- and temperature-induced conformational changes of two self-complementary dodecanucleotides. Biophys. J. 68(2):1995;A5.
-
(1995)
Biophys. J.
, vol.682
, pp. 5
-
-
Haq, I.1
Senior, S.J.2
Drake, A.F.3
Leharne, S.4
Chowdhry, B.Z.5
Jenkins, T.C.6
-
13
-
-
0025156960
-
Temperature dependence of enthalpy changes for ethidium and propidium binding to DNA: Effect of alkylamine chains
-
Hopkins H. P., Fumero J., Wilson W. D. Temperature dependence of enthalpy changes for ethidium and propidium binding to DNA: effect of alkylamine chains. Biopolymers. 29:1990;449-459.
-
(1990)
Biopolymers
, vol.29
, pp. 449-459
-
-
Hopkins, H.P.1
Fumero, J.2
Wilson, W.D.3
-
15
-
-
0001511660
-
Formation and stability of inorganic complexes in solution
-
Job P. Formation and stability of inorganic complexes in solution. Ann. Chim. (Paris). 9:1928;113-203.
-
(1928)
Ann. Chim. (Paris)
, vol.9
, pp. 113-203
-
-
Job, P.1
-
19
-
-
0016724739
-
Optical studies of the interaction of 33258 Hoechst with DNA, chromatin, and metaphase chromosomes
-
Latt S. A., Wohleb J. C. Optical studies of the interaction of 33258 Hoechst with DNA, chromatin, and metaphase chromosomes. Chromosoma. 52:1975;297-316.
-
(1975)
Chromosoma
, vol.52
, pp. 297-316
-
-
Latt, S.A.1
Wohleb, J.C.2
-
20
-
-
0028805495
-
Significant discrepancies between van't Hoff and calorimetric enthalpies. II
-
Liu Y., Sturtevant J. M. Significant discrepancies between van't Hoff and calorimetric enthalpies. II. Protein Sci. 4:1995;2559-2561.
-
(1995)
Protein Sci.
, vol.4
, pp. 2559-2561
-
-
Liu, Y.1
Sturtevant, J.M.2
-
21
-
-
0026793123
-
Nonspecific ligand-DNA equilibrium binding parameters determined by fluorescence methods
-
Lohman T. M., Mascotti D. P. Nonspecific ligand-DNA equilibrium binding parameters determined by fluorescence methods. Methods Enzymol. 212:1992;424-458.
-
(1992)
Methods Enzymol.
, vol.212
, pp. 424-458
-
-
Lohman, T.M.1
Mascotti, D.P.2
-
22
-
-
0025006448
-
Binding characteristics of Hoechst 33258 with calf thymus DNA, poly[d(A-T)], and d(CGCGAATTCGCG): Multiple stoichiometries and determination of tight binding with a wide spectrum of site affinities
-
Loontiens F. G., Regenfuss P., Zechel A., Dumortier L., Clegg R. M. Binding characteristics of Hoechst 33258 with calf thymus DNA, poly[d(A-T)], and d(CGCGAATTCGCG): multiple stoichiometries and determination of tight binding with a wide spectrum of site affinities. Biochemistry. 29:1990;9029-9039.
-
(1990)
Biochemistry
, vol.29
, pp. 9029-9039
-
-
Loontiens, F.G.1
Regenfuss, P.2
Zechel, A.3
Dumortier, L.4
Clegg, R.M.5
-
23
-
-
0026013128
-
Binding of Hoechst 33258 and 4′,6-diamidino-2-phenylindole to self-complementary decadeoxynucleotides with modified exocyclic base substituents
-
Loontiens F. G., McLaughlin L. W., Diekmann S., Clegg R. M. Binding of Hoechst 33258 and 4′,6-diamidino-2-phenylindole to self-complementary decadeoxynucleotides with modified exocyclic base substituents. Biochemistry. 30:1991;182-189.
-
(1991)
Biochemistry
, vol.30
, pp. 182-189
-
-
Loontiens, F.G.1
McLaughlin, L.W.2
Diekmann, S.3
Clegg, R.M.4
-
24
-
-
0023374851
-
Origins of netropsin binding affinity and specificity: Correlations of thermodynamic and structural data
-
Marky L. A., Breslauer K. J. Origins of netropsin binding affinity and specificity: correlations of thermodynamic and structural data. Proc. Natl Acad. Sci. USA. 84:1987;4359-4363.
-
(1987)
Proc. Natl Acad. Sci. USA
, vol.84
, pp. 4359-4363
-
-
Marky, L.A.1
Breslauer, K.J.2
-
25
-
-
0024805429
-
Probing the hydration of the minor grooves of AT synthetic DNA polymers by volume and heat changes
-
Marky L. A., Kupke D. W. Probing the hydration of the minor grooves of AT synthetic DNA polymers by volume and heat changes. Biochemistry. 28:1989;9982-9988.
-
(1989)
Biochemistry
, vol.28
, pp. 9982-9988
-
-
Marky, L.A.1
Kupke, D.W.2
-
26
-
-
0028246710
-
Salt effects on ligand DNA binding. Minor groove binding antibiotics
-
Misra V. K., Sharp K. A., Friedman R. A., Honig B. Salt effects on ligand DNA binding. Minor groove binding antibiotics. J. Mol. Biol. 238:1994;245-263.
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 245-263
-
-
Misra, V.K.1
Sharp, K.A.2
Friedman, R.A.3
Honig, B.4
-
27
-
-
0029860343
-
Water mediated protein-DNA interactions: The relationship of thermodynamics to structural detail
-
Morton C. J., Ladbury J. E. Water mediated protein-DNA interactions: the relationship of thermodynamics to structural detail. Protein Sci. 5:1996;2115-2118.
-
(1996)
Protein Sci.
, vol.5
, pp. 2115-2118
-
-
Morton, C.J.1
Ladbury, J.E.2
-
28
-
-
0028127923
-
Entropy in biological binding processes: Estimation of translational entropy loss
-
Murphy K. P., Xie D., Thompson K. S., Amzel L. M., Friere E. Entropy in biological binding processes: estimation of translational entropy loss. Proteins: Struct. Funct. Genet. 18:1994;63-67.
-
(1994)
Proteins: Struct. Funct. Genet.
, vol.18
, pp. 63-67
-
-
Murphy, K.P.1
Xie, D.2
Thompson, K.S.3
Amzel, L.M.4
Friere, E.5
-
29
-
-
0029064484
-
Significant discrepancies between van't Hoff and calorimetric enthalpies
-
Naghibi H., Tamura A., Sturtevant J. M. Significant discrepancies between van't Hoff and calorimetric enthalpies. Proc. Natl Acad. Sci. USA. 92:1995;5597-5599.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 5597-5599
-
-
Naghibi, H.1
Tamura, A.2
Sturtevant, J.M.3
-
30
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
Nicholls A., Sharp K., Honig B. Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins: Struct. Funct. Genet. 11:1991;281-296.
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.2
Honig, B.3
-
32
-
-
0029112164
-
Berenil binding to DNA duplexes and to a RNA duplex: Evidence for both intercalative and minor groove binding properties
-
Pilch D. S., Kirolos M. A., Liu X. L., Plum E., Breslauer K. J. Berenil binding to DNA duplexes and to a RNA duplex: evidence for both intercalative and minor groove binding properties. Biochemistry. 34:1995;9962-9976.
-
(1995)
Biochemistry
, vol.34
, pp. 9962-9976
-
-
Pilch, D.S.1
Kirolos, M.A.2
Liu, X.L.3
Plum, E.4
Breslauer, K.J.5
-
34
-
-
0025885778
-
Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer CGCGAATTCGCG
-
Quintana J. R., Lipanov A. A., Dickerson R. E. Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer CGCGAATTCGCG. Biochemistry. 30:1991;10294-10306.
-
(1991)
Biochemistry
, vol.30
, pp. 10294-10306
-
-
Quintana, J.R.1
Lipanov, A.A.2
Dickerson, R.E.3
-
35
-
-
0017820499
-
Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: The roles of ion association or release, screening, and ion effects on water activity
-
Record M. T., Anderson C. F., Lohman T. M. Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity. Quart. Rev. Biophys. 11:1978;103-178.
-
(1978)
Quart. Rev. Biophys.
, vol.11
, pp. 103-178
-
-
Record, M.T.1
Anderson, C.F.2
Lohman, T.M.3
-
36
-
-
0026323912
-
Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA
-
Record M. T., Ha J.-H., Fisher M. A. Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA. Methods Enzymol. 208:1991;291-344.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 291-344
-
-
Record, M.T.1
Ha, J.-H.2
Fisher, M.A.3
-
37
-
-
0001417283
-
Netropsin binding as a thermodynamic probe of the grooves of parallel DNA
-
Rentzeperis D., Marky L. A. Netropsin binding as a thermodynamic probe of the grooves of parallel DNA. J. Am. Chem. Soc. 115:1993;1645-1650.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 1645-1650
-
-
Rentzeperis, D.1
Marky, L.A.2
-
38
-
-
0027493070
-
A thermodynamic and spectroscopic study on the binding of berenil to poly d(AT) and to poly d(A)-poly d(T)
-
Schmitz H.-U., Hübner W. A thermodynamic and spectroscopic study on the binding of berenil to poly d(AT) and to poly d(A)-poly d(T). Biophys. Chem. 48:1993;61-74.
-
(1993)
Biophys. Chem.
, vol.48
, pp. 61-74
-
-
Schmitz, H.-U.1
Hübner, W.2
-
40
-
-
9644258919
-
The cost of conformational order: Entropy changes in molecular association
-
Searle M. S., Williams D. H. The cost of conformational order: entropy changes in molecular association. J. Am. Chem. Soc. 114:1992;10690-10697.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10690-10697
-
-
Searle, M.S.1
Williams, D.H.2
-
41
-
-
0027054352
-
Partitioning of free energy contributions in the estimation of binding constants: Residual motions and consequences for amide-amide hydrogen bond strength
-
Searle M. S., Williams D. H., Gerhard U. Partitioning of free energy contributions in the estimation of binding constants: residual motions and consequences for amide-amide hydrogen bond strength. J. Am. Chem. Soc. 114:1992;10697-10704.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10697-10704
-
-
Searle, M.S.1
Williams, D.H.2
Gerhard, U.3
-
43
-
-
23444450909
-
Coupling of local folding to site-specific binding of proteins to DNA
-
Spolar R. S., Record M. T. Coupling of local folding to site-specific binding of proteins to DNA. Science. 263:1994;777-783.
-
(1994)
Science
, vol.263
, pp. 777-783
-
-
Spolar, R.S.1
Record, M.T.2
-
45
-
-
0022568665
-
Binding of Hoechst 33258 to chromatin in situ
-
Stokke T., Steen H. B. Binding of Hoechst 33258 to chromatin in situ. Cytometry. 7:1986;227-234.
-
(1986)
Cytometry
, vol.7
, pp. 227-234
-
-
Stokke, T.1
Steen, H.B.2
-
46
-
-
0024296533
-
The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG)
-
Teng M.-K., Usman N., Frederick C. A., Wang A. H.-J. The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG). Nucl. Acids Res. 16:1988;2671-2690.
-
(1988)
Nucl. Acids Res.
, vol.16
, pp. 2671-2690
-
-
Teng, M.-K.1
Usman, N.2
Frederick, C.A.3
Wang, A.H.-J.4
-
47
-
-
0028357259
-
2
-
2. Eur. J. Biochem. 222:1994;721-726.
-
(1994)
Eur. J. Biochem.
, vol.222
, pp. 721-726
-
-
Vega, M.C.1
García-Sáez, I.2
Aymamí, J.3
Eritja, T.4
Van Der Marel, G.A.5
Van Boom, J.H.6
Rich, A.7
Coll, M.8
-
48
-
-
0027475726
-
Toward an estimation of binding constants in aqueous solution: Studies of associations of vancomycin group antibiotics
-
Williams D. H., Searle M. S., Mackay J. P., Gerhard U., Maplestone R. A. Toward an estimation of binding constants in aqueous solution: studies of associations of vancomycin group antibiotics. Proc. Natl Acad. Sci. USA. 90:1993;1172-1178.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 1172-1178
-
-
Williams, D.H.1
Searle, M.S.2
Mackay, J.P.3
Gerhard, U.4
Maplestone, R.A.5
-
49
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman T., Williston S., Brandts J. F., Lin L.-N. Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal. Biochem. 179:1989;131-137.
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.-N.4
-
50
-
-
0022587259
-
Nonintercalating DNA-binding ligands: Specificity of the interaction and their tools in biophysical, biochemical and biological investigations of the genetic material
-
Zimmer C., Wähnert U. Nonintercalating DNA-binding ligands: specificity of the interaction and their tools in biophysical, biochemical and biological investigations of the genetic material. Prog. Biophys. Mol. Biol. 47:1986;31-112.
-
(1986)
Prog. Biophys. Mol. Biol.
, vol.47
, pp. 31-112
-
-
Zimmer, C.1
Wähnert, U.2
|