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Volumn 11, Issue 2, 2016, Pages

Using group II introns for attenuating the in vitro and in vivo expression of a homing endonuclease

Author keywords

[No Author keywords available]

Indexed keywords

COBALT CHLORIDE; ENDONUCLEASE; HOMING ENDONUCLEASE; MAGNESIUM CHLORIDE; MITOCHONDRIAL DNA; UNCLASSIFIED DRUG; COBALT; FUNGAL PROTEIN; RECOMBINANT PROTEIN; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE;

EID: 84977627406     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0150097     Document Type: Article
Times cited : (6)

References (73)
  • 1
    • 0034656221 scopus 로고    scopus 로고
    • Invasion of a multitude of genetic niches by mobile endonuclease genes
    • PMID: 10754232
    • Gimble FS. Invasion of a multitude of genetic niches by mobile endonuclease genes. FEMS Microbiol Lett. 2000; 185: 99-107. PMID: 10754232
    • (2000) FEMS Microbiol Lett , vol.185 , pp. 99-107
    • Gimble, F.S.1
  • 2
    • 84655177221 scopus 로고    scopus 로고
    • Introns, Mobile Elements, and Plasmids
    • Bullerwell CE, editor. Springer Berlin Heidelberg
    • Hausner G. Introns, Mobile Elements, and Plasmids. In: Bullerwell CE, editor. Organelle Genetics. Springer Berlin Heidelberg; 2012. p. 329-357.
    • (2012) Organelle Genetics , pp. 329-357
    • Hausner, G.1
  • 3
    • 0033806414 scopus 로고    scopus 로고
    • Barriers to intron promiscuity in bacteria
    • PMID: 10986228
    • Edgell DR, Belfort M, Shub DA. Barriers to intron promiscuity in bacteria. J Bacteriol. 2000; 182: 5281-5289. PMID: 10986228
    • (2000) J Bacteriol , vol.182 , pp. 5281-5289
    • Edgell, D.R.1    Belfort, M.2    Shub, D.A.3
  • 4
    • 0036849042 scopus 로고    scopus 로고
    • Identification of a family of group II introns encoding LAGLIDADG ORFs typical of group I introns
    • PMID: 12458791
    • Toor N, Zimmerly S. Identification of a family of group II introns encoding LAGLIDADG ORFs typical of group I introns. RNA. 2002; 8: 1373-1377. PMID: 12458791
    • (2002) RNA , vol.8 , pp. 1373-1377
    • Toor, N.1    Zimmerly, S.2
  • 5
    • 0024446859 scopus 로고
    • Group I introns as mobile genetic elements: Facts and mechanistic speculations - A review
    • PMID: 2555264
    • Dujon B. Group I introns as mobile genetic elements: facts and mechanistic speculations - a review. Gene. 1989; 82: 91-114. PMID: 2555264
    • (1989) Gene , vol.82 , pp. 91-114
    • Dujon, B.1
  • 6
    • 0029616336 scopus 로고
    • Mechanisms of intron mobility
    • PMID: 8530436
    • Belfort M, Perlman PS. Mechanisms of intron mobility. J Biol Chem. 1995; 270: 30237-30240. PMID: 8530436
    • (1995) J Biol Chem , vol.270 , pp. 30237-30240
    • Belfort, M.1    Perlman, P.S.2
  • 7
    • 0029831039 scopus 로고    scopus 로고
    • Exon coconversion biases accompanying intron homing: Battle of the nucleases
    • PMID: 8804310
    • Mueller JE, Smith D, Belfort M. Exon coconversion biases accompanying intron homing: battle of the nucleases. Genes Dev. 1996; 10: 2158-2166. PMID: 8804310
    • (1996) Genes Dev , vol.10 , pp. 2158-2166
    • Mueller, J.E.1    Smith, D.2    Belfort, M.3
  • 8
    • 33644756595 scopus 로고    scopus 로고
    • Homing endonuclease structure and function
    • Stoddard BL. Homing endonuclease structure and function. Q Rev Biophys. 2006; 38: 49-95.
    • (2006) Q Rev Biophys , vol.38 , pp. 49-95
    • Stoddard, B.L.1
  • 9
    • 0030729344 scopus 로고    scopus 로고
    • Statistical modeling and analysis of the LAGLIDADG family of site specific endonucleases and identification of an intein that encodes a site-specific endonucleases of the H-N-H family
    • PMID: 9358175
    • Dalgard JZ, Klar AJ, Moser MJ, Holley WR, Chatterjee A, Mian IS. Statistical modeling and analysis of the LAGLIDADG family of site specific endonucleases and identification of an intein that encodes a site-specific endonucleases of the H-N-H family. Nucleic Acids Res. 1997; 25: 4626-4638. PMID: 9358175
    • (1997) Nucleic Acids Res , vol.25 , pp. 4626-4638
    • Dalgard, J.Z.1    Klar, A.J.2    Moser, M.J.3    Holley, W.R.4    Chatterjee, A.5    Mian, I.S.6
  • 10
    • 3042568753 scopus 로고    scopus 로고
    • The spread of LAGLIDADG homing endonuclease genes in rDNA
    • PMID: 15069127
    • Haugen P, Bhattacharya D. The spread of LAGLIDADG homing endonuclease genes in rDNA. Nucleic Acids Res. 2004; 32: 2049-2057. PMID: 15069127
    • (2004) Nucleic Acids Res , vol.32 , pp. 2049-2057
    • Haugen, P.1    Bhattacharya, D.2
  • 11
    • 79951694132 scopus 로고    scopus 로고
    • Meganucleases and other tools for targeted genome engineering: Perspectives and challenges for gene therapy
    • PMID: 21182466
    • Silva G, Poirot L, Galetto R, Smith J, Montoya G, Duchateau P, et al. Meganucleases and other tools for targeted genome engineering: perspectives and challenges for gene therapy. Curr Gene Ther. 2011; 11: 11-27. PMID: 21182466
    • (2011) Curr Gene Ther , vol.11 , pp. 11-27
    • Silva, G.1    Poirot, L.2    Galetto, R.3    Smith, J.4    Montoya, G.5    Duchateau, P.6
  • 12
    • 72749124013 scopus 로고    scopus 로고
    • Heritable targeted mutagenesis in maize using a designed endonuclease
    • PMID: 19811621
    • Gao H, Smith J, Yang M, Jones S, Djukanovic V, Nicholson MG, et al. Heritable targeted mutagenesis in maize using a designed endonuclease. Plant J. 2010; 61: 176-187. doi: 10.1111/j.1365-313X.2009.04041.x PMID: 19811621
    • (2010) Plant J , vol.61 , pp. 176-187
    • Gao, H.1    Smith, J.2    Yang, M.3    Jones, S.4    Djukanovic, V.5    Nicholson, M.G.6
  • 13
    • 55749111397 scopus 로고    scopus 로고
    • The population genetics of using homing endonuclease genes in vector and pest management
    • PMID: 18660532
    • Deredec A, Burt A, Godfray HC. The population genetics of using homing endonuclease genes in vector and pest management. Genetics. 2008; 179: 2013-2026. doi: 10.1534/genetics.108.089037 PMID: 18660532
    • (2008) Genetics , vol.179 , pp. 2013-2026
    • Deredec, A.1    Burt, A.2    Godfray, H.C.3
  • 15
    • 79955939676 scopus 로고    scopus 로고
    • Insect population control by homing endonuclease-base gene drive: An evaluation in Drosophila melanogaster
    • PMID: 21368273
    • Chan YS, Naujoks DA, Huen DS, Russell S. Insect population control by homing endonuclease-base gene drive: an evaluation in Drosophila melanogaster. Genetics, 2011; 188: 33-44. doi: 10.1534/genetics.111.127506 PMID: 21368273
    • (2011) Genetics , vol.188 , pp. 33-44
    • Chan, Y.S.1    Naujoks, D.A.2    Huen, D.S.3    Russell, S.4
  • 16
    • 67149105856 scopus 로고    scopus 로고
    • Murine leukemias with retroviral insertions at Lmo2 are predictive of the leukemias induced in SCID-X1 patients following retroviral gene therapy
    • PMID: 19461887
    • Davé UP, Akagi K. Tripathi R, Cleveland SM, Thompson MA, Yi M, et al. Murine leukemias with retroviral insertions at Lmo2 are predictive of the leukemias induced in SCID-X1 patients following retroviral gene therapy. PLoS Genet. 2009; 5: e1000491. doi: 10.1371/journal.pgen.1000491 PMID: 19461887
    • (2009) PLoS Genet , vol.5
    • Davé, U.P.1    Akagi, K.2    Tripathi, R.3    Cleveland, S.M.4    Thompson, M.A.5    Yi, M.6
  • 17
    • 70349407359 scopus 로고    scopus 로고
    • Efficient targeting of a SCID gene by an engineered single chain homing endonuclease
    • Grizot S, Smith J, Daboussi F, Prieto J, Rendondo P, Merino N, et al. Efficient targeting of a SCID gene by an engineered single chain homing endonuclease. Nucleic Acids Res. 2009; 38: 2006-2018.
    • (2009) Nucleic Acids Res , vol.38 , pp. 2006-2018
    • Grizot, S.1    Smith, J.2    Daboussi, F.3    Prieto, J.4    Rendondo, P.5    Merino, N.6
  • 18
    • 80051964399 scopus 로고    scopus 로고
    • Tapping natural reservoirs of homing endonucleases for targeted gene modification
    • PMID: 21784983
    • Takeuchi R, Lambert AR, Mak AN, Jacoby K. Tapping natural reservoirs of homing endonucleases for targeted gene modification. Proc Natl Acad Sci USA. 2011; 108: 13077-13082. doi: 10.1073/pnas.1107719108 PMID: 21784983
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 13077-13082
    • Takeuchi, R.1    Lambert, A.R.2    Mak, A.N.3    Jacoby, K.4
  • 19
    • 0037133235 scopus 로고    scopus 로고
    • Insertion of reversible redox switch into a rare cutting DNA endonuclease
    • PMID: 11841209
    • Posey KL, Gimble FS. Insertion of reversible redox switch into a rare cutting DNA endonuclease. Biochemistry. 2002; 41; 2184-2190. PMID: 11841209
    • (2002) Biochemistry , vol.41 , pp. 2184-2190
    • Posey, K.L.1    Gimble, F.S.2
  • 21
    • 84875588195 scopus 로고    scopus 로고
    • The mtDNA rns gene landscape in Ophiostomatales and other fungal taxa: Twintrons, introns and intron encoded proteins
    • PMID: 23403360
    • Hafez M, Majer A, Sethuraman J, Rudski SM, Michel F, Hausner G. The mtDNA rns gene landscape in Ophiostomatales and other fungal taxa: Twintrons, introns and intron encoded proteins. Fungal Genet Biol. 2013; 53: 71-83. doi: 10.1016/j.fgb.2013.01.005 PMID: 23403360
    • (2013) Fungal Genet Biol , vol.53 , pp. 71-83
    • Hafez, M.1    Majer, A.2    Sethuraman, J.3    Rudski, S.M.4    Michel, F.5    Hausner, G.6
  • 22
    • 84896134700 scopus 로고    scopus 로고
    • A homing endonuclease with a switch: Characterization of a twintron encoded homing endonuclease
    • PMID: 24508098
    • Guha TK, Hausner G. A homing endonuclease with a switch: Characterization of a twintron encoded homing endonuclease. Fungal Genet Biol. 2014; 65: 57-68. doi: 10.1016/j.fgb.2014.01.004 PMID: 24508098
    • (2014) Fungal Genet Biol , vol.65 , pp. 57-68
    • Guha, T.K.1    Hausner, G.2
  • 23
    • 4344656805 scopus 로고    scopus 로고
    • Mobile group II introns
    • PMID: 15568970
    • Lambowitz AM, Zimmerly S. Mobile group II introns. Annu Rev Genet. 2004; 38: 1-35. PMID: 15568970
    • (2004) Annu Rev Genet , vol.38 , pp. 1-35
    • Lambowitz, A.M.1    Zimmerly, S.2
  • 24
    • 34250631912 scopus 로고    scopus 로고
    • Group II introns: Structure, folding and splicing mechanism
    • Review PMID: 17570818
    • Olga F, Nora Z. Group II introns: structure, folding and splicing mechanism (Review). Biol Chem. 2007; 388: 665-678. PMID: 17570818
    • (2007) Biol Chem , vol.388 , pp. 665-678
    • Olga, F.1    Nora, Z.2
  • 25
    • 63549105637 scopus 로고    scopus 로고
    • The ribozyme core of group II introns: A structure in want of partners
    • Review PMID: 19299141
    • Michel F, Costa M, Westhof E. The ribozyme core of group II introns: a structure in want of partners (Review). Trends Biochem Sci. 2009; 34: 189-199. doi: 10.1016/j.tibs.2008.12.007 PMID: 19299141
    • (2009) Trends Biochem Sci , vol.34 , pp. 189-199
    • Michel, F.1    Costa, M.2    Westhof, E.3
  • 26
    • 84863874209 scopus 로고    scopus 로고
    • Group II introns: Mobile ribozymes that invade DNA
    • PMID: 20463000
    • Lambowitz AM, Zimmerly S. Group II introns: Mobile ribozymes that invade DNA. Cold Spring Harb Perspect Biol. 2011; 3: a003616. doi: 10.1101/cshperspect.a003616 PMID: 20463000
    • (2011) Cold Spring Harb Perspect Biol , vol.3
    • Lambowitz, A.M.1    Zimmerly, S.2
  • 27
    • 0034810056 scopus 로고    scopus 로고
    • Metal ion coordination by the AGC triad in domain 5 contributes to group II intron catalysis
    • Gordon PM, Piccirilli JA. Metal ion coordination by the AGC triad in domain 5 contributes to group II intron catalysis. Nature Struct Biol. 2002; 8: 893-898.
    • (2002) Nature Struct Biol , vol.8 , pp. 893-898
    • Gordon, P.M.1    Piccirilli, J.A.2
  • 28
    • 34250349882 scopus 로고    scopus 로고
    • A second divalent metal ion in the group II intron reaction center
    • PMID: 17584608
    • Gordon PM, Fong R, Piccirilli JA. A second divalent metal ion in the group II intron reaction center. Chem Biol. 2007; 14: 607-612. PMID: 17584608
    • (2007) Chem Biol , vol.14 , pp. 607-612
    • Gordon, P.M.1    Fong, R.2    Piccirilli, J.A.3
  • 29
    • 27844569938 scopus 로고    scopus 로고
    • Group II introns: Ribozymes that splice RNA and invade DNA
    • 3rd ed
    • Pyle AM, Lambowitz AM. Group II introns: ribozymes that splice RNA and invade DNA. In: The RNA world ( 3rd ed). 2006. pp. 469-505.
    • (2006) The RNA World , pp. 469-505
    • Pyle, A.M.1    Lambowitz, A.M.2
  • 30
    • 0037086011 scopus 로고    scopus 로고
    • Structural insights into group II intron catalysis and branch-site selection
    • PMID: 11859154
    • Zhang L, Doudna JA. Structural insights into group II intron catalysis and branch-site selection. Science. 2002; 295: 2084-2088. PMID: 11859154
    • (2002) Science , vol.295 , pp. 2084-2088
    • Zhang, L.1    Doudna, J.A.2
  • 31
    • 41749109563 scopus 로고    scopus 로고
    • Crystal structure of a self-spliced group II intron
    • PMID: 18388288
    • Toor N, Keating KS, Taylor SD, Pyle AM. Crystal structure of a self-spliced group II intron. Science. 2008; 320:77-82. doi: 10.1126/science.1153803 PMID: 18388288
    • (2008) Science , vol.320 , pp. 77-82
    • Toor, N.1    Keating, K.S.2    Taylor, S.D.3    Pyle, A.M.4
  • 32
    • 84928892707 scopus 로고    scopus 로고
    • Evolution of group II introns
    • PMID: 25960782
    • Zimmerly S, Semper C. Evolution of group II introns. Mob DNA. 2015; 6:7. doi: 10.1186/s13100-015-0037-5 PMID: 25960782
    • (2015) Mob DNA , vol.6 , pp. 7
    • Zimmerly, S.1    Semper, C.2
  • 33
    • 18744425024 scopus 로고    scopus 로고
    • Group II intron splicing in Escherichia coli: Phenotypes of cis-acting mutations resemble splicing defects observed in organelle RNA processing
    • PMID: 10325423
    • Hollander V, Kück U. Group II intron splicing in Escherichia coli: phenotypes of cis-acting mutations resemble splicing defects observed in organelle RNA processing. Nucleic Acids Res. 1999; 27: 2339-2344. PMID: 10325423
    • (1999) Nucleic Acids Res , vol.27 , pp. 2339-2344
    • Hollander, V.1    Kück, U.2
  • 34
    • 84865272073 scopus 로고    scopus 로고
    • Homing endonucleases: DNA scissors on a mission
    • PMID: 22891613
    • Hafez M, Hausner G. Homing endonucleases: DNA scissors on a mission. Genome. 2012; 55: 553-569. doi: 10.1139/g2012-049 PMID: 22891613
    • (2012) Genome , vol.55 , pp. 553-569
    • Hafez, M.1    Hausner, G.2
  • 35
    • 84896766709 scopus 로고    scopus 로고
    • Homing endonucleases from mobile group I introns: Discovery to genome engineering
    • PMID: 24589358
    • Stoddard BL. Homing endonucleases from mobile group I introns: discovery to genome engineering. Mob DNA. 2014; 5: 7. doi: 10.1186/1759-8753-5-7 PMID: 24589358
    • (2014) Mob DNA , vol.5 , pp. 7
    • Stoddard, B.L.1
  • 36
    • 84867221079 scopus 로고    scopus 로고
    • Comparative reaction engineering studies for succinic acid production from sucrose by metabolically engineered Escherichia coli in fed-batch-operated stirred tank bioreactors
    • PMID: 22588847
    • Hoefel T, Faust G, Reinecke L, Rudinger N, Weuster-Botz D. Comparative reaction engineering studies for succinic acid production from sucrose by metabolically engineered Escherichia coli in fed-batch-operated stirred tank bioreactors. Biotechnol J. 2012; 7: 1277-1287. doi: 10.1002/biot.201200046 PMID: 22588847
    • (2012) Biotechnol J , vol.7 , pp. 1277-1287
    • Hoefel, T.1    Faust, G.2    Reinecke, L.3    Rudinger, N.4    Weuster-Botz, D.5
  • 37
    • 0025373469 scopus 로고
    • A self-splicing group II intron in the mitochondrial large subunit rRNA (LSUrRNA) gene of the eukaryotic alga Scenedesmus obliquus
    • PMID: 1692614
    • Kück U, Godehardt I, Schmidt U. A self-splicing group II intron in the mitochondrial large subunit rRNA (LSUrRNA) gene of the eukaryotic alga Scenedesmus obliquus. Nucleic Acids Res. 1990; 18: 2691-2697. PMID: 1692614
    • (1990) Nucleic Acids Res , vol.18 , pp. 2691-2697
    • Kück, U.1    Godehardt, I.2    Schmidt, U.3
  • 38
    • 0032190211 scopus 로고    scopus 로고
    • Characterization of two intein homing endonucleases encoded in the DNA polymerase gene of Pyrococcus kodakaraensis strain KOD1
    • PMID: 9742242
    • Nishioka M, Fujiwara S, Takagi M, Imanaka T. Characterization of two intein homing endonucleases encoded in the DNA polymerase gene of Pyrococcus kodakaraensis strain KOD1. Nucleic Acids Res. 1998; 26: 4409-4412. PMID: 9742242
    • (1998) Nucleic Acids Res , vol.26 , pp. 4409-4412
    • Nishioka, M.1    Fujiwara, S.2    Takagi, M.3    Imanaka, T.4
  • 39
    • 68249136795 scopus 로고    scopus 로고
    • Characterization of intein homing endonuclease encoded in the DNA polymerase gene of Thermococcus marinus
    • PMID: 19634205
    • Bae H, Kim KP, Song JM, Yang JS, Kwon ST. Characterization of intein homing endonuclease encoded in the DNA polymerase gene of Thermococcus marinus. FEMS Microbiol Lett. 2009; 297: 180-188. PMID: 19634205
    • (2009) FEMS Microbiol Lett , vol.297 , pp. 180-188
    • Bae, H.1    Kim, K.P.2    Song, J.M.3    Yang, J.S.4    Kwon, S.T.5
  • 40
    • 0015217770 scopus 로고
    • Magnesium transport in Escherichia coli. Inhibition by cobaltous ion
    • PMID: 4928897
    • Nelson DL, Kennedy EP. Magnesium transport in Escherichia coli. Inhibition by cobaltous ion. J Biol Chem. 1971; 246: 3042-3049. PMID: 4928897
    • (1971) J Biol Chem , vol.246 , pp. 3042-3049
    • Nelson, D.L.1    Kennedy, E.P.2
  • 41
    • 0015343320 scopus 로고
    • Transport of magnesium by a repressible and a nonrepressible system in Escherichia coli
    • PMID: 4556454
    • Nelson DL, Kennedy EP. Transport of magnesium by a repressible and a nonrepressible system in Escherichia coli. Proc Natl Acad Sci USA. 1972; 69: 1091-1093. PMID: 4556454
    • (1972) Proc Natl Acad Sci USA , vol.69 , pp. 1091-1093
    • Nelson, D.L.1    Kennedy, E.P.2
  • 42
    • 84885065897 scopus 로고    scopus 로고
    • Enhanced group II intron retrohoming in magnesium-deficient E.coli via selection of mutations in the ribozyme core
    • Truong DM, Sidote DJ, Russell R, Lambowitz AM. Enhanced group II intron retrohoming in magnesium-deficient E.coli via selection of mutations in the ribozyme core. Proc Natl Acad Sci USA, 2013; 110: 3800-3809.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 3800-3809
    • Truong, D.M.1    Sidote, D.J.2    Russell, R.3    Lambowitz, A.M.4
  • 43
    • 84930074657 scopus 로고    scopus 로고
    • The Phyre2 web portal for protein modeling, prediction and analysis
    • PMID: 25950237
    • Kelley LA, Mezulis S, Yates CM, Wass MN, Sternberg MJ. The Phyre2 web portal for protein modeling, prediction and analysis. Nat Protoc. 2015; 10: 845-858. doi: 10.1038/nprot.2015.053 PMID: 25950237
    • (2015) Nat Protoc , vol.10 , pp. 845-858
    • Kelley, L.A.1    Mezulis, S.2    Yates, C.M.3    Wass, M.N.4    Sternberg, M.J.5
  • 44
    • 84892424438 scopus 로고    scopus 로고
    • Biotechnological applications of mobile group II introns and their reverse transcriptases: Gene targeting, RNA-seq, and non-coding RNA analysis
    • Enyeart PJ, Mohr G, Ellington AD, Lambowitz AM. Biotechnological applications of mobile group II introns and their reverse transcriptases: gene targeting, RNA-seq, and non-coding RNA analysis. Mob DNA. 2014; 5: 2l.
    • (2014) Mob DNA , vol.5 , pp. 2l
    • Enyeart, P.J.1    Mohr, G.2    Ellington, A.D.3    Lambowitz, A.M.4
  • 45
    • 0037444087 scopus 로고    scopus 로고
    • Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker
    • PMID: 12626707
    • Zhong J, Karberg M, Lambowitz AM. Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker. Nucleic Acids Res. 2003; 31: 1656-1664. PMID: 12626707
    • (2003) Nucleic Acids Res , vol.31 , pp. 1656-1664
    • Zhong, J.1    Karberg, M.2    Lambowitz, A.M.3
  • 46
    • 84940741423 scopus 로고    scopus 로고
    • Mobile bacterial group II introns at the crux of eukaryotic evolution
    • MDNA3-0050-2014
    • Lambowitz AM, Belfort M. Mobile bacterial group II introns at the crux of eukaryotic evolution. Microbiol Spectr. 2015; 3: MDNA3-0050-2014.
    • (2015) Microbiol Spectr , vol.3
    • Lambowitz, A.M.1    Belfort, M.2
  • 47
    • 84924039550 scopus 로고    scopus 로고
    • Evolution of RNA-protein interactions: Non-specific binding led to RNA splicing activity of fungal mitochondrial tyrosyl-tRNA synthetases
    • PMID: 25536042
    • Lamech LT, Mallam AL, Lambowitz AM. Evolution of RNA-protein interactions: non-specific binding led to RNA splicing activity of fungal mitochondrial tyrosyl-tRNA synthetases. PLoS Biol. 2014; 12; e1002028. doi: 10.1371/journal.pbio.1002028 PMID: 25536042
    • (2014) PLoS Biol , vol.12
    • Lamech, L.T.1    Mallam, A.L.2    Lambowitz, A.M.3
  • 48
    • 84908200313 scopus 로고    scopus 로고
    • iBrick: A new standard for iterative assembly of biological parts with homing endonucleases
    • PMID: 25329380
    • Liu JK, Chen WH, Ren SX, Zhao GP, Wang J. iBrick: a new standard for iterative assembly of biological parts with homing endonucleases. PLoS One. 2014; 9: e110852. doi: 10.1371/journal.pone.0110852 PMID: 25329380
    • (2014) PLoS One , vol.9
    • Liu, J.K.1    Chen, W.H.2    Ren, S.X.3    Zhao, G.P.4    Wang, J.5
  • 49
    • 84940758288 scopus 로고    scopus 로고
    • Retrohoming of a mobile group II intron in human cells suggests how eukaryotes limit group II intron proliferation
    • PMID: 26241656
    • Truong DM, Hewitt FC, Hanson JH, Cui X, Lambowitz AM. Retrohoming of a mobile group II intron in human cells suggests how eukaryotes limit group II intron proliferation. PLoS Genet. 2015; 11: e1005422. doi: 10.1371/journal.pgen.1005422 PMID: 26241656
    • (2015) PLoS Genet , vol.11
    • Truong, D.M.1    Hewitt, F.C.2    Hanson, J.H.3    Cui, X.4    Lambowitz, A.M.5
  • 50
    • 34247569016 scopus 로고    scopus 로고
    • Gene targeting in gram-negative bacteria by use of a mobile group II intron ("Targetron") expressed from a broad-host-range vector
    • PMID: 17322321
    • Yao J, Lambowitz AM. Gene targeting in gram-negative bacteria by use of a mobile group II intron ("Targetron") expressed from a broad-host-range vector. Appl Environ Microbiol 2007; 73: 2735-2743. PMID: 17322321
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2735-2743
    • Yao, J.1    Lambowitz, A.M.2
  • 52
    • 84925436942 scopus 로고    scopus 로고
    • Magnesium uptake of Arabidopsis transporters, AtMRS2-10 and AtMRS2-11, expressed in Escherichia coli mutants: Complementation and growth inhibition by aluminum
    • PMID: 25772503
    • Ishijima S, Uda M, Hirata T, Shibata M, Kitagawa N, Sagami I. Magnesium uptake of Arabidopsis transporters, AtMRS2-10 and AtMRS2-11, expressed in Escherichia coli mutants: Complementation and growth inhibition by aluminum. Biochim Biophys Acta. 2015; 1848: 1376-1382. doi: 10.1016/j.bbamem.2015.03.005 PMID: 25772503
    • (2015) Biochim Biophys Acta , vol.1848 , pp. 1376-1382
    • Ishijima, S.1    Uda, M.2    Hirata, T.3    Shibata, M.4    Kitagawa, N.5    Sagami, I.6
  • 53
    • 84890672274 scopus 로고    scopus 로고
    • 2+-induced conformational changes in the btuB riboswitch from E. coli
    • PMID: 24243114
    • 2+-induced conformational changes in the btuB riboswitch from E. coli. RNA. 2014; 20: 36-45. doi: 10.1261/rna.039909.113 PMID: 24243114
    • (2014) RNA , vol.20 , pp. 36-45
    • Choudhary, P.K.1    Sigel, R.K.2
  • 54
    • 84876357338 scopus 로고    scopus 로고
    • The structural stabilization of the κ three-way junction by Mg (II) represents the first step in the folding of a group II intron
    • PMID: 23275550
    • Donghi D, Pechlaner M, Finazzo C, Knobloch B, Sigel RKO. The structural stabilization of the κ three-way junction by Mg (II) represents the first step in the folding of a group II intron. Nucleic Acids Res. 2013; 41: 2489-2504. doi: 10.1093/nar/gks1179 PMID: 23275550
    • (2013) Nucleic Acids Res , vol.41 , pp. 2489-2504
    • Donghi, D.1    Pechlaner, M.2    Finazzo, C.3    Knobloch, B.4    Sigel, R.K.O.5
  • 55
    • 21244480925 scopus 로고    scopus 로고
    • Group II intron ribozymes and metal ions-a delicate relationship
    • Sigel RKO. Group II intron ribozymes and metal ions-a delicate relationship. Eur J Inorg Chem. 2005; 2281-2292.
    • (2005) Eur J Inorg Chem , pp. 2281-2292
    • Sigel, R.K.O.1
  • 56
    • 34047118522 scopus 로고    scopus 로고
    • CRISPR provides acquired resistance against viruses in prokaryotes
    • PMID: 17379808
    • Barrangou R, Fremaux C, Deveau H, Richards M, Boyaval P, Moineau S, et al. CRISPR provides acquired resistance against viruses in prokaryotes. Science. 2007; 315: 1709-1712. PMID: 17379808
    • (2007) Science , vol.315 , pp. 1709-1712
    • Barrangou, R.1    Fremaux, C.2    Deveau, H.3    Richards, M.4    Boyaval, P.5    Moineau, S.6
  • 57
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • PMID: 23287718
    • Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, et al. Multiplex genome engineering using CRISPR/Cas systems. Science. 2013; 339: 819-823. doi: 10.1126/science.1231143 PMID: 23287718
    • (2013) Science , vol.339 , pp. 819-823
    • Cong, L.1    Ran, F.A.2    Cox, D.3    Lin, S.4    Barretto, R.5    Habib, N.6
  • 58
    • 84873734105 scopus 로고    scopus 로고
    • RNA-guided human genome engineering via Cas9
    • PMID: 23287722
    • Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE, et al. RNA-guided human genome engineering via Cas9. Science. 2013; 339: 823-826. doi: 10.1126/science.1232033 PMID: 23287722
    • (2013) Science , vol.339 , pp. 823-826
    • Mali, P.1    Yang, L.2    Esvelt, K.M.3    Aach, J.4    Guell, M.5    DiCarlo, J.E.6
  • 60
    • 84929666410 scopus 로고    scopus 로고
    • Expanding the biologist's toolkit with CRISPR-Cas9
    • PMID: 26000842
    • Sternberg SH, Doudna JA. Expanding the biologist's toolkit with CRISPR-Cas9. Mol Cell. 2015; 58: 568-574. doi: 10.1016/j.molcel.2015.02.032 PMID: 26000842
    • (2015) Mol Cell , vol.58 , pp. 568-574
    • Sternberg, S.H.1    Doudna, J.A.2
  • 61
    • 84925441397 scopus 로고    scopus 로고
    • Determining the specificities of TALENs, Cas9, and other genome-editing enzymes
    • PMID: 25398335
    • Pattanayak V, Guilinger JP, Liu DR. Determining the specificities of TALENs, Cas9, and other genome-editing enzymes. Methods Enzymol. 2014; 546: 47-78. doi: 10.1016/B978-0-12-801185-0.00003-9 PMID: 25398335
    • (2014) Methods Enzymol , vol.546 , pp. 47-78
    • Pattanayak, V.1    Guilinger, J.P.2    Liu, D.R.3
  • 62
    • 84898778301 scopus 로고    scopus 로고
    • A guide to genome engineering with programmable nucleases
    • PMID: 24690881
    • Kim H, Kim JS. A guide to genome engineering with programmable nucleases. Nat Rev Genet. 2014; 15: 321-334. doi: 10.1038/nrg3686 PMID: 24690881
    • (2014) Nat Rev Genet , vol.15 , pp. 321-334
    • Kim, H.1    Kim, J.S.2
  • 63
    • 77949398275 scopus 로고    scopus 로고
    • Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS
    • PMID: 20132443
    • Pul U, Wurm R, Arslan Z, Geissen R, Hofmann N, Wagner R. Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS. Mol. Microbiol. 2010; 75: 1495-1512. doi: 10.1111/j.1365-2958.2010.07073.x PMID: 20132443
    • (2010) Mol. Microbiol. , vol.75 , pp. 1495-1512
    • Pul, U.1    Wurm, R.2    Arslan, Z.3    Geissen, R.4    Hofmann, N.5    Wagner, R.6
  • 64
    • 77956621546 scopus 로고    scopus 로고
    • H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO
    • PMID: 20659289
    • Westra ER, Pul U, Heidrich N, Jore MM, Lundgren M, Stratmann T, et al. H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO. Mol. Microbiol. 2010; 77: 1380-93. doi: 10.1111/j.1365-2958.2010.07315.x PMID: 20659289
    • (2010) Mol. Microbiol. , vol.77 , pp. 1380-1393
    • Westra, E.R.1    Pul, U.2    Heidrich, N.3    Jore, M.M.4    Lundgren, M.5    Stratmann, T.6
  • 65
    • 84942793975 scopus 로고    scopus 로고
    • Photoactivatable CRISPR-Cas9 for optogenetic genome editing
    • PMID: 26076431
    • Nihongaki Y, Kawano F, Nakajima T, Sato M. Photoactivatable CRISPR-Cas9 for optogenetic genome editing. Nat Biotechnol. 2015; 33: 755-760. doi: 10.1038/nbt.3245 PMID: 26076431
    • (2015) Nat Biotechnol , vol.33 , pp. 755-760
    • Nihongaki, Y.1    Kawano, F.2    Nakajima, T.3    Sato, M.4
  • 66
    • 84923297110 scopus 로고    scopus 로고
    • A split-Cas9 architecture for inducible genome editing and transcription modulation
    • PMID: 25643054
    • Zetsche B, Volz SE, Zhang F. A split-Cas9 architecture for inducible genome editing and transcription modulation. Nat Biotechnol. 2015; 33: 139-142. doi: 10.1038/nbt.3149 PMID: 25643054
    • (2015) Nat Biotechnol , vol.33 , pp. 139-142
    • Zetsche, B.1    Volz, S.E.2    Zhang, F.3
  • 67
    • 84937764361 scopus 로고    scopus 로고
    • Small molecule-triggered Cas9 protein with improved genome-editing specificity
    • PMID: 25848930
    • Davis KM, Pattanayak V, Thompson DB, Zuris JA, Liu DR. Small molecule-triggered Cas9 protein with improved genome-editing specificity. Nat Chem Biol. 2015; 11: 316-318. doi: 10.1038/nchembio.1793 PMID: 25848930
    • (2015) Nat Chem Biol , vol.11 , pp. 316-318
    • Davis, K.M.1    Pattanayak, V.2    Thompson, D.B.3    Zuris, J.A.4    Liu, D.R.5
  • 68
    • 37249020936 scopus 로고    scopus 로고
    • Cis- and trans-splicing of group II introns in plant mitochondria
    • PMID: 18006386
    • Bonen L. Cis- and trans-splicing of group II introns in plant mitochondria. Mitochondrion. 2008; 8: 26-34. PMID: 18006386
    • (2008) Mitochondrion , vol.8 , pp. 26-34
    • Bonen, L.1
  • 69
    • 31544468450 scopus 로고    scopus 로고
    • A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas
    • PMID: 16407333
    • Merendino L, Perron K, Rahire M, Howald I, Rochaix JD, Goldschmidt-Clermont M. A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas. Nucleic Acids Res. 2006; 34: 262-274. PMID: 16407333
    • (2006) Nucleic Acids Res , vol.34 , pp. 262-274
    • Merendino, L.1    Perron, K.2    Rahire, M.3    Howald, I.4    Rochaix, J.D.5    Goldschmidt-Clermont, M.6
  • 70
    • 81755161585 scopus 로고    scopus 로고
    • Contribution of base-pairing interactions between group II intron fragments during trans-splicing in vivo
    • PMID: 22033330
    • Quiroga C, Kronstad L, Ritlop C, Filion A, Cousineau B. Contribution of base-pairing interactions between group II intron fragments during trans-splicing in vivo. RNA. 2011; 17: 2212-2221. doi: 10.1261/rna.028886.111 PMID: 22033330
    • (2011) RNA , vol.17 , pp. 2212-2221
    • Quiroga, C.1    Kronstad, L.2    Ritlop, C.3    Filion, A.4    Cousineau, B.5
  • 71
    • 84955191442 scopus 로고    scopus 로고
    • Use of transposase and ends of IS608 enables precise and scarless genome modification for modulating gene expression and metabolic engineering applications in Escherichia coli
    • Thakker C, Lin K, Martini-Stoica H, Bennett GN. Use of transposase and ends of IS608 enables precise and scarless genome modification for modulating gene expression and metabolic engineering applications in Escherichia coli. Biotechnol J. 2015; doi: 10.1002/biot.201500205
    • (2015) Biotechnol J
    • Thakker, C.1    Lin, K.2    Martini-Stoica, H.3    Bennett, G.N.4
  • 72
    • 84937538704 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli using CRISPR-Cas9 meditated genome editing
    • PMID: 26141150
    • Li Y, Lin Z, Huang C, Zhang Y, Wang Z, Tang YJ, et al. Metabolic engineering of Escherichia coli using CRISPR-Cas9 meditated genome editing. Metab Eng. 2015; 31: 13-21. doi: 10.1016/j.ymben.2015.06.006 PMID: 26141150
    • (2015) Metab Eng , vol.31 , pp. 13-21
    • Li, Y.1    Lin, Z.2    Huang, C.3    Zhang, Y.4    Wang, Z.5    Tang, Y.J.6
  • 73
    • 84988876848 scopus 로고    scopus 로고
    • Expansion of the genetic toolkit for metabolic engineering of Clostridium pasteurianum: Chromosomal gene disruption of the endogenous CpaAI restriction enzyme
    • PMID: 25431621
    • Pyne ME, Moo-Young M, Chung DA, Chou CP. Expansion of the genetic toolkit for metabolic engineering of Clostridium pasteurianum: chromosomal gene disruption of the endogenous CpaAI restriction enzyme. Biotechnol Biofuels. 2014; 7: 163. doi: 10.1186/s13068-014-0163-1 PMID: 25431621
    • (2014) Biotechnol Biofuels , vol.7 , pp. 163
    • Pyne, M.E.1    Moo-Young, M.2    Chung, D.A.3    Chou, C.P.4


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