-
1
-
-
0344643065
-
The pathway for DNA recognition and RNA integration by a group II intron retrotransposon
-
Aizawa Y, Xiang Q, Lambowitz AM, Pyle AM. 2003. The pathway for DNA recognition and RNA integration by a group II intron retrotransposon. Mol. Cell 11:795-805
-
(2003)
Mol. Cell
, vol.11
, pp. 795-805
-
-
Aizawa, Y.1
Xiang, Q.2
Lambowitz, A.M.3
Pyle, A.M.4
-
2
-
-
0346123001
-
Two for the price of one: A bifunctional intron-encoded DNA endonuclease-RNA maturase
-
Belfort M. 2003. Two for the price of one: a bifunctional intron-encoded DNA endonuclease-RNA maturase. Genes Dev. 17:2860-63
-
(2003)
Genes Dev.
, vol.17
, pp. 2860-2863
-
-
Belfort, M.1
-
3
-
-
0000680282
-
-
See Ref. 16a
-
Belfort M, Derbyshire V, Parker MM, Cousineau B, Lambowitz AM. 2002. Mobile introns: pathways and proteins. See Ref. 16a, pp. 761-83
-
(2002)
Mobile Introns: Pathways and Proteins
, vol.16
, pp. 761-783
-
-
Belfort, M.1
Derbyshire, V.2
Parker, M.M.3
Cousineau, B.4
Lambowitz, A.M.5
-
4
-
-
1542511810
-
Conjugation mediates transfer of the L1.LtrB group II intron between different bacterial species
-
Belhocine K, Plante I, Cousineau B. 2004. Conjugation mediates transfer of the L1.LtrB group II intron between different bacterial species. Mol. Microbiol. 51:1459-69
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 1459-1469
-
-
Belhocine, K.1
Plante, I.2
Cousineau, B.3
-
5
-
-
0027441281
-
Trans-splicing of pre-mRNA in plants, animals, and protists
-
Bonen L. 1993. Trans-splicing of pre-mRNA in plants, animals, and protists. FASEB J. 7:40-46
-
(1993)
FASEB J.
, vol.7
, pp. 40-46
-
-
Bonen, L.1
-
6
-
-
0019333281
-
Assembly of the mitochondrial membrane system. Structure and nucleotide sequence of the gene coding for subunit 1 of yeast cytochrome oxidase
-
Bonitz SG, Coruzzi G, Thalenfeld BE, Tzagoloff A, Macino G. 1980. Assembly of the mitochondrial membrane system. Structure and nucleotide sequence of the gene coding for subunit 1 of yeast cytochrome oxidase. J. Biol. Chem. 255:11927-41
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 11927-11941
-
-
Bonitz, S.G.1
Coruzzi, G.2
Thalenfeld, B.E.3
Tzagoloff, A.4
Macino, G.5
-
7
-
-
0037477435
-
Parallels in genome evolution in mitochondria and bacterial symbionts
-
Burger G, Lang BF. 2003. Parallels in genome evolution in mitochondria and bacterial symbionts. IUBMB Life 55:205-12
-
(2003)
IUBMB Life
, vol.55
, pp. 205-212
-
-
Burger, G.1
Lang, B.F.2
-
8
-
-
0142227237
-
Targeting survival: Integration site selection by retroviruses and LTR-retrotransposons
-
Bushman FD. 2003. Targeting survival: integration site selection by retroviruses and LTR-retrotransposons. Cell 115:135-38
-
(2003)
Cell
, vol.115
, pp. 135-138
-
-
Bushman, F.D.1
-
9
-
-
0020986735
-
An mRNA maturase is encoded by the first intron of the mitochondrial gene for the subunit I of cytochrome oxidase in S. cerevisiae
-
Carignani G, Groudinsky O, Frezza D, Schiavon E, Bergantino E, Slonimski PP. 1983. An mRNA maturase is encoded by the first intron of the mitochondrial gene for the subunit I of cytochrome oxidase in S. cerevisiae. Cell 35:733-42
-
(1983)
Cell
, vol.35
, pp. 733-742
-
-
Carignani, G.1
Groudinsky, O.2
Frezza, D.3
Schiavon, E.4
Bergantino, E.5
Slonimski, P.P.6
-
10
-
-
0021895324
-
Self-splicing RNA: Implications for evolution
-
Cech TR. 1985. Self-splicing RNA: implications for evolution. Int. Rev. Cytol. 93:3-22
-
(1985)
Int. Rev. Cytol.
, vol.93
, pp. 3-22
-
-
Cech, T.R.1
-
11
-
-
0022552726
-
The generality of self-splicing RNA: Relationship to nuclear mRNA splicing
-
Cech TR. 1986. The generality of self-splicing RNA: relationship to nuclear mRNA splicing. Cell 44:207-10
-
(1986)
Cell
, vol.44
, pp. 207-210
-
-
Cech, T.R.1
-
12
-
-
0029312926
-
Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5′-splice site selection
-
Chin K, Pyle AM. 1995. Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5′-splice site selection. RNA 1:391-406
-
(1995)
RNA
, vol.1
, pp. 391-406
-
-
Chin, K.1
Pyle, A.M.2
-
13
-
-
0027377879
-
Group II and group III introns of twintrons: Potential relationships with nuclear pre-mRNA introns
-
Copertino DW, Hallick RB. 1993. Group II and group III introns of twintrons: potential relationships with nuclear pre-mRNA introns. Trends Biochem. Sci. 18:467-71
-
(1993)
Trends Biochem. Sci.
, vol.18
, pp. 467-471
-
-
Copertino, D.W.1
Hallick, R.B.2
-
14
-
-
0034665039
-
A three-dimensional perspective on exon binding by a group II self-splicing intron
-
Costa M, Michel F, Westhof E. 2000. A three-dimensional perspective on exon binding by a group II self-splicing intron. EMBO J. 19:5007-18
-
(2000)
EMBO J.
, vol.19
, pp. 5007-5018
-
-
Costa, M.1
Michel, F.2
Westhof, E.3
-
15
-
-
0034720157
-
Retrotransposition of a bacterial group II intron
-
Cousineau B, Lawrence S, Smith D, Belfort M. 2000. Retrotransposition of a bacterial group II intron. Nature 404:1018-21. Erratum. 2001. Nature 414:84
-
(2000)
Nature
, vol.404
, pp. 1018-1021
-
-
Cousineau, B.1
Lawrence, S.2
Smith, D.3
Belfort, M.4
-
16
-
-
0034720157
-
Erratum
-
Cousineau B, Lawrence S, Smith D, Belfort M. 2000. Retrotransposition of a bacterial group II intron. Nature 404:1018-21. Erratum. 2001. Nature 414:84
-
(2001)
Nature
, vol.414
, pp. 84
-
-
-
17
-
-
0032555726
-
Retrohoming of a bacterial group II intron: Mobility via complete reverse splicing, independent of homologous DNA recombination
-
Cousineau B, Smith D, Lawrence-Cavanagh S, Mueller JE, Yang J, et al. 1998. Retrohoming of a bacterial group II intron: mobility via complete reverse splicing, independent of homologous DNA recombination. Cell 94:451-62
-
(1998)
Cell
, vol.94
, pp. 451-462
-
-
Cousineau, B.1
Smith, D.2
Lawrence-Cavanagh, S.3
Mueller, J.E.4
Yang, J.5
-
18
-
-
0003873979
-
-
Washington, DC: ASM Press
-
a. Craig NL, Craigie R, Gellert M, Lambowitz AM, eds. 2002. Mobile DNA II. Washington, DC: ASM Press
-
(2002)
Mobile DNA II
-
-
Craig, N.L.1
Craigie, R.2
Gellert, M.3
Lambowitz, A.M.4
-
19
-
-
2942605839
-
A group II intron-encoded maturase functions preferentially in cis and requires both the reverse transcriptase and X domains to promote RNA splicing
-
In press
-
Cui X, Matsuura M, Wang Q, Ma H, Lambowitz AM. 2004. A group II intron-encoded maturase functions preferentially in cis and requires both the reverse transcriptase and X domains to promote RNA splicing. J. Mol. Biol. In press
-
(2004)
J. Mol. Biol.
-
-
Cui, X.1
Matsuura, M.2
Wang, Q.3
Ma, H.4
Lambowitz, A.M.5
-
20
-
-
0030034289
-
Retrohoming: cDNA-mediated mobility of group II introns requires a catalytic RNA
-
Curcio MJ, Belfort M. 1996. Retrohoming: cDNA-mediated mobility of group II introns requires a catalytic RNA. Cell 84:9-12
-
(1996)
Cell
, vol.84
, pp. 9-12
-
-
Curcio, M.J.1
Belfort, M.2
-
21
-
-
0026082573
-
Single-step selection for Ty 1 element retrotransposition
-
Curcio MJ, Garfinkel DJ. 1991. Single-step selection for Ty 1 element retrotransposition. Proc. Natl. Acad. Sci. USA 88:936-40
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 936-940
-
-
Curcio, M.J.1
Garfinkel, D.J.2
-
22
-
-
2542455809
-
Mutations in the Lactococcus lactis L1.LtrB group II intron that retain mobility in vivo
-
D'Souza LM, Zhong J. 2002. Mutations in the Lactococcus lactis L1.LtrB group II intron that retain mobility in vivo. BMC Mol. Biol. 3:17
-
(2002)
BMC Mol. Biol.
, vol.3
, pp. 17
-
-
D'Souza, L.M.1
Zhong, J.2
-
23
-
-
0036493198
-
Compilation and analysis of group II intron insertions in bacterial genomes: Evidence for retroelement behavior
-
Dai L, Zimmerly S. 2002. Compilation and analysis of group II intron insertions in bacterial genomes: evidence for retroelement behavior. Nucleic Acids Res. 30:1091-102
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1091-1102
-
-
Dai, L.1
Zimmerly, S.2
-
24
-
-
0036795276
-
The dispersal of five group II introns among natural populations of Escherichia coli
-
Dai L, Zimmerly S. 2002. The dispersal of five group II introns among natural populations of Escherichia coli. RNA 8:1294-307
-
(2002)
RNA
, vol.8
, pp. 1294-1307
-
-
Dai, L.1
Zimmerly, S.2
-
25
-
-
0037278926
-
ORF-less and reverse-transcriptase-encoding group II introns in archaebacteria, with a pattern of homing into related group II intron ORFs
-
Dai L, Zimmerly S. 2003. ORF-less and reverse-transcriptase-encoding group II introns in archaebacteria, with a pattern of homing into related group II intron ORFs. RNA 9:14-19
-
(2003)
RNA
, vol.9
, pp. 14-19
-
-
Dai, L.1
Zimmerly, S.2
-
26
-
-
0027263683
-
Domain 5 interacts with domain 6 and influences the second transesterification reaction of group II intron self-splicing
-
Dib-Hajj SD, Boulanger SC, Hebbar SK, Peebles CL, Franzen JS, Perlman PS. 1993. Domain 5 interacts with domain 6 and influences the second transesterification reaction of group II intron self-splicing. Nucleic Acids Res. 21:1797-804
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 1797-1804
-
-
Dib-Hajj, S.D.1
Boulanger, S.C.2
Hebbar, S.K.3
Peebles, C.L.4
Franzen, J.S.5
Perlman, P.S.6
-
27
-
-
0035818493
-
Retrotransposition of a yeast group II intron occurs by reverse splicing directly into ectopic DNA sites
-
Dickson L, Huang HR, Liu L, Matsuura M, Lambowitz AM, Perlman PS. 2001. Retrotransposition of a yeast group II intron occurs by reverse splicing directly into ectopic DNA sites. Proc. Natl. Acad. Sci. USA 98:13207-12
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 13207-13212
-
-
Dickson, L.1
Huang, H.R.2
Liu, L.3
Matsuura, M.4
Lambowitz, A.M.5
Perlman, P.S.6
-
28
-
-
0031975280
-
A maturase-encoding group III twintron is conserved in deeply rooted euglenoid species: Are group III introns the chicken or the egg?
-
Doetsch NA, Thompson MD, Hallick RB. 1998. A maturase-encoding group III twintron is conserved in deeply rooted euglenoid species: Are group III introns the chicken or the egg? Mol. Biol. Evol. 15:76-86
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 76-86
-
-
Doetsch, N.A.1
Thompson, M.D.2
Hallick, R.B.3
-
29
-
-
0002687402
-
Origin and evolutionary relationships of retroelements
-
ed. SS Morse. New York: Raven
-
Eickbush TH. 1994. Origin and evolutionary relationships of retroelements. In The Evolutionary Biology of Viruses, ed. SS Morse, pp. 121-57. New York: Raven
-
(1994)
The Evolutionary Biology of Viruses
, pp. 121-157
-
-
Eickbush, T.H.1
-
30
-
-
0033552870
-
Mobile introns: Retrohoming by complete reverse splicing
-
Eickbush TH. 1999. Mobile introns: retrohoming by complete reverse splicing. Curr. Biol. 9:R11-14
-
(1999)
Curr. Biol.
, vol.9
-
-
Eickbush, T.H.1
-
32
-
-
0033756209
-
Multiple homing pathways used by yeast mitochondrial group II introns
-
Eskes R, Liu L, Ma H, Chao MY, Dickson L, et al. 2000. Multiple homing pathways used by yeast mitochondrial group II introns. Mol. Cell. Biol. 20:8432-46
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8432-8446
-
-
Eskes, R.1
Liu, L.2
Ma, H.3
Chao, M.Y.4
Dickson, L.5
-
33
-
-
0030894573
-
Mobility of yeast mitochondrial group II introns: Engineering a new site specificity and retrohoming via full reverse splicing
-
Eskes R, Yang J, Lambowitz AM, Perlman PS. 1997. Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing. Cell 88:865-74
-
(1997)
Cell
, vol.88
, pp. 865-874
-
-
Eskes, R.1
Yang, J.2
Lambowitz, A.M.3
Perlman, P.S.4
-
34
-
-
0038799763
-
Domains 2 and 3 interact to form critical elements of the group II intron active site
-
Fedorova O, Mitros T, Pyle AM. 2003. Domains 2 and 3 interact to form critical elements of the group II intron active site. J. Mol. Biol. 330:197-209
-
(2003)
J. Mol. Biol.
, vol.330
, pp. 197-209
-
-
Fedorova, O.1
Mitros, T.2
Pyle, A.M.3
-
35
-
-
0141566427
-
A group II intron has invaded the genus Azotobacter and is inserted within the termination codon of the essential groEL gene
-
Ferat JL, Le Gouar M, Michel F. 2003. A group II intron has invaded the genus Azotobacter and is inserted within the termination codon of the essential groEL gene. Mol. Microbiol. 49:1407-23
-
(2003)
Mol. Microbiol.
, vol.49
, pp. 1407-1423
-
-
Ferat, J.L.1
Le Gouar, M.2
Michel, F.3
-
36
-
-
0027325933
-
Group II self-splicing introns in bacteria
-
Ferat JL, Michel F. 1993. Group II self-splicing introns in bacteria. Nature 364:358-61
-
(1993)
Nature
, vol.364
, pp. 358-361
-
-
Ferat, J.L.1
Michel, F.2
-
37
-
-
0037315696
-
Genetic manipulation of Lactococcus lactis by using targeted group II introns: Generation of stable insertions without selection
-
Frazier CL, San Filippo J, Lambowitz AM, Mills DA. 2003. Genetic manipulation of Lactococcus lactis by using targeted group II introns: generation of stable insertions without selection. Appl. Environ. Microbiol. 69:1121-28
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 1121-1128
-
-
Frazier, C.L.1
San Filippo, J.2
Lambowitz, A.M.3
Mills, D.A.4
-
38
-
-
0033598755
-
Recurrent invasion and extinction of a selfish gene
-
Goddard MR, Burt A. 1999. Recurrent invasion and extinction of a selfish gene. Proc. Natl. Acad. Sci. USA 96:13880-85
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 13880-13885
-
-
Goddard, M.R.1
Burt, A.2
-
39
-
-
0025803701
-
A small chloroplast RNA may be required for trans-splicing in Chlamydomonas reinhardtii
-
Goldschmidt-Clermont M, Choquet Y, Girard-Bascou J, Michel F, Schirmer-Rahire M, Rochaix JD. 1991. A small chloroplast RNA may be required for trans-splicing in Chlamydomonas reinhardtii. Cell 65:135-43
-
(1991)
Cell
, vol.65
, pp. 135-143
-
-
Goldschmidt-Clermont, M.1
Choquet, Y.2
Girard-Bascou, J.3
Michel, F.4
Schirmer-Rahire, M.5
Rochaix, J.D.6
-
40
-
-
0028309650
-
Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family
-
Gorbalenya AE. 1994. Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family. Protein Sci. 3:1117-20
-
(1994)
Protein Sci.
, vol.3
, pp. 1117-1120
-
-
Gorbalenya, A.E.1
-
41
-
-
0035094207
-
Mutually exclusive distribution of IS 1548 and GBSi1, an active group II intron identified in human isolates of group B streptococci
-
Granlund M, Michel F, Norgren M. 2001. Mutually exclusive distribution of IS 1548 and GBSi1, an active group II intron identified in human isolates of group B streptococci. J. Bacteriol. 183:2560-69
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2560-2569
-
-
Granlund, M.1
Michel, F.2
Norgren, M.3
-
42
-
-
0034698288
-
Group II introns designed to insert into therapeutically relevant DNA target sites in human cells
-
Guo H, Karberg M, Long M, Jones JP, 3rd, Sullenger B, Lambowitz AM. 2000. Group II introns designed to insert into therapeutically relevant DNA target sites in human cells. Science 289:452-57
-
(2000)
Science
, vol.289
, pp. 452-457
-
-
Guo, H.1
Karberg, M.2
Long, M.3
Jones III, J.P.4
Sullenger, B.5
Lambowitz, A.M.6
-
43
-
-
0030832614
-
Group II intron endonucleases use both RNA and protein subunits for recognition of specific sequences in double-stranded DNA
-
Guo H, Zimmerly S, Perlman PS, Lambowitz AM. 1997. Group II intron endonucleases use both RNA and protein subunits for recognition of specific sequences in double-stranded DNA. EMBO J. 16:6835-48
-
(1997)
EMBO J.
, vol.16
, pp. 6835-6848
-
-
Guo, H.1
Zimmerly, S.2
Perlman, P.S.3
Lambowitz, A.M.4
-
44
-
-
0242637333
-
The DIVa maturase binding site in the yeast group II intron aI2 is essential for intron homing but not for in vivo splicing
-
Huang HR, Chao MY, Armstrong B, Wang Y, Lambowitz AM, Perlman PS. 2003. The DIVa maturase binding site in the yeast group II intron aI2 is essential for intron homing but not for in vivo splicing. Mol. Cell. Biol. 23:8809-19
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 8809-8819
-
-
Huang, H.R.1
Chao, M.Y.2
Armstrong, B.3
Wang, Y.4
Lambowitz, A.M.5
Perlman, P.S.6
-
45
-
-
0346734117
-
A bacterial group II intron favors retrotransposition into plasmid targets
-
Ichiyanagi K, Beauregard A, Belfort M. 2003. A bacterial group II intron favors retrotransposition into plasmid targets. Proc. Natl. Acad. Sci. USA 100:15742-47
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 15742-15747
-
-
Ichiyanagi, K.1
Beauregard, A.2
Belfort, M.3
-
46
-
-
0036886327
-
Retrotransposition of the L1.LtrB group II intron proceeds predominantly via reverse splicing into DNA targets
-
Ichiyanagi K, Beauregard A, Lawrence S, Smith D, Cousineau B, Belfort M. 2002. Retrotransposition of the L1.LtrB group II intron proceeds predominantly via reverse splicing into DNA targets. Mol. Microbiol. 46:1259-72
-
(2002)
Mol. Microbiol.
, vol.46
, pp. 1259-1272
-
-
Ichiyanagi, K.1
Beauregard, A.2
Lawrence, S.3
Smith, D.4
Cousineau, B.5
Belfort, M.6
-
47
-
-
0024022167
-
Group II intron domain 5 facilitates a trans-splicing reaction
-
Jarrell KA, Dietrich RC, Perlman PS. 1988. Group II intron domain 5 facilitates a trans-splicing reaction. Mol. Cell. Biol. 8:2361-66
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 2361-2366
-
-
Jarrell, K.A.1
Dietrich, R.C.2
Perlman, P.S.3
-
48
-
-
0035865141
-
Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts
-
Jenkins BD, Barkan A. 2001. Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts. EMBO J. 20:872-79
-
(2001)
EMBO J.
, vol.20
, pp. 872-879
-
-
Jenkins, B.D.1
Barkan, A.2
-
49
-
-
0037436328
-
DNA target site requirements for homing in vivo of a bacterial group II intron encoding a protein lacking the DNA endonuclease domain
-
Jiménez-Zurdo JI, García-Rodríguez FM, Barrientos-Durán A, Toro N. 2003. DNA target site requirements for homing in vivo of a bacterial group II intron encoding a protein lacking the DNA endonuclease domain. J. Mol. Biol. 326:413-23
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 413-423
-
-
Jiménez-Zurdo, J.I.1
García-Rodríguez, F.M.2
Barrientos-Durán, A.3
Toro, N.4
-
50
-
-
0035199354
-
Group II introns as controllable gene targeting vectors for genetic manipulation of bacteria
-
Karberg M, Guo H, Zhong J, Coon R, Perutka J, Lambowitz AM. 2001. Group II introns as controllable gene targeting vectors for genetic manipulation of bacteria. Nat. Biotechnol. 19:1162-67
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 1162-1167
-
-
Karberg, M.1
Guo, H.2
Zhong, J.3
Coon, R.4
Perutka, J.5
Lambowitz, A.M.6
-
51
-
-
0027410517
-
Reverse transcriptase activity associated with maturase-encoding group II introns in yeast mitochondria
-
Kennell JC, Moran JV, Perlman PS, Butow RA, Lambowitz AM. 1993. Reverse transcriptase activity associated with maturase-encoding group II introns in yeast mitochondria. Cell 73:133-46
-
(1993)
Cell
, vol.73
, pp. 133-146
-
-
Kennell, J.C.1
Moran, J.V.2
Perlman, P.S.3
Butow, R.A.4
Lambowitz, A.M.5
-
52
-
-
0024505260
-
Infectious introns
-
Lambowitz AM. 1989. Infectious introns. Cell 56:323-26
-
(1989)
Cell
, vol.56
, pp. 323-326
-
-
Lambowitz, A.M.1
-
54
-
-
0002671710
-
Group I and group II ribozymes as RNPs: Clues to the past and guides to the future
-
ed. RF Gesteland, TR Cech, JF Atkins. Cold Spring Harbor, NY: Cold Spring Harbor Lab. Press. 2nd ed.
-
Lambowitz AM, Caprara MG, Zimmerly S, Perlman PS. 1999. Group I and group II ribozymes as RNPs: clues to the past and guides to the future. In The RNA World, ed. RF Gesteland, TR Cech, JF Atkins, pp. 451-85. Cold Spring Harbor, NY: Cold Spring Harbor Lab. Press. 2nd ed.
-
(1999)
The RNA World
, pp. 451-485
-
-
Lambowitz, A.M.1
Caprara, M.G.2
Zimmerly, S.3
Perlman, P.S.4
-
55
-
-
0025001288
-
Involvement of aminoacyl-tRNA synthetases and other proteins in group I and group II intron splicing
-
Lambowitz AM, Perlman PS. 1990. Involvement of aminoacyl-tRNA synthetases and other proteins in group I and group II intron splicing. Trends Biochem. Sci. 15:440-44
-
(1990)
Trends Biochem. Sci.
, vol.15
, pp. 440-444
-
-
Lambowitz, A.M.1
Perlman, P.S.2
-
56
-
-
0028033047
-
Homing of a group II intron in yeast mitochondrial DNA is accompanied by unidirectional co-conversion of upstream-located markers
-
Lazowska J, Meunier B, Macadre C. 1994. Homing of a group II intron in yeast mitochondrial DNA is accompanied by unidirectional co-conversion of upstream-located markers. EMBO J. 13:4963-72
-
(1994)
EMBO J.
, vol.13
, pp. 4963-4972
-
-
Lazowska, J.1
Meunier, B.2
Macadre, C.3
-
57
-
-
0038049910
-
Group II introns: Structural and catalytic versatility of large natural ribozymes
-
Lehmann K, Schmidt U. 2003. Group II introns: structural and catalytic versatility of large natural ribozymes. Crit. Rev. Biochem. Mol. Biol. 38:249-303
-
(2003)
Crit. Rev. Biochem. Mol. Biol.
, vol.38
, pp. 249-303
-
-
Lehmann, K.1
Schmidt, U.2
-
58
-
-
0024660652
-
Mitochondrial introns aI1 and/or aI2 are needed for the in vivo deletion of intervening sequences
-
Levra-Juillet E, Boulet A, Séraphin B, Simon M, Faye G. 1989. Mitochondrial introns aI1 and/or aI2 are needed for the in vivo deletion of intervening sequences. Mol. Gen. Genet. 217:168-71
-
(1989)
Mol. Gen. Genet.
, vol.217
, pp. 168-171
-
-
Levra-Juillet, E.1
Boulet, A.2
Séraphin, B.3
Simon, M.4
Faye, G.5
-
59
-
-
0033576611
-
Sequence and analysis of chromosome 2 of the plant A rabidopsis thaliana
-
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, et al. 1999. Sequence and analysis of chromosome 2 of the plant A rabidopsis thaliana. Nature 402:761-68
-
(1999)
Nature
, vol.402
, pp. 761-768
-
-
Lin, X.1
Kaul, S.2
Rounsley, S.3
Shea, T.P.4
Benito, M.I.5
-
60
-
-
0027450385
-
Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition
-
Luan DD, Korman MH, Jakubczak JL, Eickbush TH. 1993. Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition. Cell 72:595-605
-
(1993)
Cell
, vol.72
, pp. 595-605
-
-
Luan, D.D.1
Korman, M.H.2
Jakubczak, J.L.3
Eickbush, T.H.4
-
61
-
-
0032976398
-
The age and evolution of non-LTR retrotransposable elements
-
Malik HS, Burke WD, Eickbush TH. 1999. The age and evolution of non-LTR retrotransposable elements. Mol. Biol. Evol. 16:793-805
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 793-805
-
-
Malik, H.S.1
Burke, W.D.2
Eickbush, T.H.3
-
62
-
-
0034024848
-
Homing of a bacterial group II intron with an intron-encoded protein lacking a recognizable endonuclease domain
-
Martínez-Abarca F, García-Rodríguez FM, Toro N. 2000. Homing of a bacterial group II intron with an intron-encoded protein lacking a recognizable endonuclease domain. Mol. Microbiol. 35:1405-12
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 1405-1412
-
-
Martínez-Abarca, F.1
García-Rodríguez, F.M.2
Toro, N.3
-
63
-
-
0034535773
-
Group II introns in the bacterial world
-
Martínez-Abarca F, Toro N. 2000. Group II introns in the bacterial world. Mol. Microbiol. 38:917-26
-
(2000)
Mol. Microbiol.
, vol.38
, pp. 917-926
-
-
Martínez-Abarca, F.1
Toro, N.2
-
64
-
-
0034326314
-
RecA-independent ectopic transposition in vivo of a bacterial group II intron
-
Martínez-Abarca F, Toro N. 2000. RecA-independent ectopic transposition in vivo of a bacterial group II intron. Nucleic Acids Res. 28:4397-402
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4397-4402
-
-
Martínez-Abarca, F.1
Toro, N.2
-
65
-
-
0031744472
-
Characterization and splicing in vivo of a Sinorhizobium meliloti group II intron associated with particular insertion sequences of the IS 630-Tc1/IS 3 retroposon superfamily
-
Martínez-Abarca F, Zekri S, Toro N. 1998. Characterization and splicing in vivo of a Sinorhizobium meliloti group II intron associated with particular insertion sequences of the IS 630-Tc1/IS 3 retroposon superfamily. Mol. Microbiol. 28:1295-306
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 1295-1306
-
-
Martínez-Abarca, F.1
Zekri, S.2
Toro, N.3
-
66
-
-
0037126592
-
Mechanism of maturase-promoted group II intron splicing
-
Matsuura M, Noah JW, Lambowitz AM. 2001. Mechanism of maturase-promoted group II intron splicing. EMBO J. 20:7259-70
-
(2001)
EMBO J.
, vol.20
, pp. 7259-7270
-
-
Matsuura, M.1
Noah, J.W.2
Lambowitz, A.M.3
-
67
-
-
9844256088
-
A bacterial group II intron encoding reverse transcriptase, maturase, and DNA endonuclease activities: Biochemical demonstration of maturase activity and insertion of new genetic information within the intron
-
Matsuura M, Saldanha R, Ma H, Wank H, Yang J, et al. 1997. A bacterial group II intron encoding reverse transcriptase, maturase, and DNA endonuclease activities: biochemical demonstration of maturase activity and insertion of new genetic information within the intron. Genes Dev. 11:2910-24
-
(1997)
Genes Dev.
, vol.11
, pp. 2910-2924
-
-
Matsuura, M.1
Saldanha, R.2
Ma, H.3
Wank, H.4
Yang, J.5
-
68
-
-
0000622412
-
Group II introns transpose in yeast mitochondria
-
ed. E Quagliariello, S Papa, F Palmieri, C Saccone. Amsterdam: Elsevier
-
Meunier B, Tian G-L, Macadre C, Slonimski PP, Lazowska J. 1990. Group II introns transpose in yeast mitochondria. In Structure Function and Biogenesis of Energy Transfer Systems, ed. E Quagliariello, S Papa, F Palmieri, C Saccone, pp. 169-74. Amsterdam: Elsevier
-
(1990)
Structure Function and Biogenesis of Energy Transfer Systems
, pp. 169-174
-
-
Meunier, B.1
Tian, G.-L.2
Macadre, C.3
Slonimski, P.P.4
Lazowska, J.5
-
69
-
-
0029066770
-
Structure and activities of group II introns
-
Michel F, Ferat JL. 1995. Structure and activities of group II introns. Annu. Rev. Biochem. 64:435-61
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 435-461
-
-
Michel, F.1
Ferat, J.L.2
-
70
-
-
0022384634
-
Mitochondrial class II introns encode proteins related to the reverse transcriptases of retroviruses
-
Michel F, Lang BF. 1985. Mitochondrial class II introns encode proteins related to the reverse transcriptases of retroviruses. Nature 316:641-43
-
(1985)
Nature
, vol.316
, pp. 641-643
-
-
Michel, F.1
Lang, B.F.2
-
71
-
-
0024428420
-
Comparative and functional anatomy of group II catalytic introns - A review
-
Michel F, Umesono K, Ozeki H. 1989. Comparative and functional anatomy of group II catalytic introns-a review. Gene 82:5-30
-
(1989)
Gene
, vol.82
, pp. 5-30
-
-
Michel, F.1
Umesono, K.2
Ozeki, H.3
-
72
-
-
0028904152
-
Conversion of a group II intron into a new multiple-tumover ribozyme that selectively cleaves oligonucleotides: Elucidation of reaction mechanism and structure/function relationships
-
Michels WJ Jr, Pyle AM. 1995. Conversion of a group II intron into a new multiple-tumover ribozyme that selectively cleaves oligonucleotides: elucidation of reaction mechanism and structure/function relationships. Biochemistry 34:2965-77
-
(1995)
Biochemistry
, vol.34
, pp. 2965-2977
-
-
Michels Jr., W.J.1
Pyle, A.M.2
-
73
-
-
0030963986
-
Homing of a group II intron from Lactococcus lactis subsp. lactis ML3
-
Mills DA, Manias DA, McKay LL, Dunny GM. 1997. Homing of a group II intron from Lactococcus lactis subsp. lactis ML3. J. Bacteriol. 179:6107-11
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6107-6111
-
-
Mills, D.A.1
Manias, D.A.2
McKay, L.L.3
Dunny, G.M.4
-
74
-
-
0029949972
-
Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci
-
Mills DA, McKay LL, Dunny GM. 1996. Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci. J. Bacteriol. 178:3531-38
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3531-3538
-
-
Mills, D.A.1
McKay, L.L.2
Dunny, G.M.3
-
75
-
-
0037440002
-
Putative proteins related to group II intron reverse transcriptase/ maturases are encoded by nuclear genes in higher plants
-
Mohr G, Lambowitz AM. 2003. Putative proteins related to group II intron reverse transcriptase/maturases are encoded by nuclear genes in higher plants. Nucleic Acids Res. 31:647-52
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 647-652
-
-
Mohr, G.1
Lambowitz, A.M.2
-
76
-
-
0027434086
-
Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function
-
Mohr G, Perlman PS, Lambowitz AM. 1993. Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function. Nucleic Acids Res. 21:4991-97
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 4991-4997
-
-
Mohr, G.1
Perlman, P.S.2
Lambowitz, A.M.3
-
77
-
-
0034161995
-
Rules for DNA target-site recognition by a lactococcal group II intron enable retargeting of the intron to specific DNA sequences
-
Mohr G, Smith D, Belfort M, Lambowitz AM. 2000. Rules for DNA target-site recognition by a lactococcal group II intron enable retargeting of the intron to specific DNA sequences. Genes Dev. 14:559-73
-
(2000)
Genes Dev.
, vol.14
, pp. 559-573
-
-
Mohr, G.1
Smith, D.2
Belfort, M.3
Lambowitz, A.M.4
-
79
-
-
0028225133
-
Splicing defective mutants of the COXI gene of yeast mitochondrial DNA: Initial definition of the maturase domain of the group II intron AI2
-
Moran JV, Mecklenburg KL, Sass P, Belcher SM, Mahnke D, et al. 1994. Splicing defective mutants of the COXI gene of yeast mitochondrial DNA: initial definition of the maturase domain of the group II intron AI2. Nucleic Acids Res. 22:2057-64
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2057-2064
-
-
Moran, J.V.1
Mecklenburg, K.L.2
Sass, P.3
Belcher, S.M.4
Mahnke, D.5
-
80
-
-
0028900134
-
Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements
-
Moran JV, Zimmerly S, Eskes R, Kennell JC, Lambowitz AM, et al. 1995. Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements. Mol. Cell. Biol. 15:2828-38
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 2828-2838
-
-
Moran, J.V.1
Zimmerly, S.2
Eskes, R.3
Kennell, J.C.4
Lambowitz, A.M.5
-
81
-
-
0027382204
-
Transposition of group II intron aI1 in yeast and invasion of mitochondrial genes at new locations
-
Mueller MW, Allmaier M, Eskes R, Schweyen RJ. 1993. Transposition of group II intron aI1 in yeast and invasion of mitochondrial genes at new locations. Nature 366:174-76
-
(1993)
Nature
, vol.366
, pp. 174-176
-
-
Mueller, M.W.1
Allmaier, M.2
Eskes, R.3
Schweyen, R.J.4
-
82
-
-
0345268697
-
Mobility of the Sinorhizobium meliloti group II intron RmInt1 occurs by reverse splicing into DNA, but requires an unknown reverse transcriptase priming mechanism
-
Muñoz-Adelantado E, San Filippo J, Martínez-Abarca F, García-Rodríguez FM, Lambowitz AM, Toro N. 2003. Mobility of the Sinorhizobium meliloti group II intron RmInt1 occurs by reverse splicing into DNA, but requires an unknown reverse transcriptase priming mechanism. J. Mol. Biol. 327:931-43
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 931-943
-
-
Muñoz-Adelantado, E.1
San Filippo, J.2
Martínez-Abarca, F.3
García-Rodríguez, F.M.4
Lambowitz, A.M.5
Toro, N.6
-
83
-
-
0036923541
-
Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1
-
Nakamura Y, Kaneko T, Sato S, Ikeuchi M, Katoh H, et al. 2002. Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. DNA Res. 9:123-30
-
(2002)
DNA Res.
, vol.9
, pp. 123-130
-
-
Nakamura, Y.1
Kaneko, T.2
Sato, S.3
Ikeuchi, M.4
Katoh, H.5
-
84
-
-
0242381359
-
2+ concentration on group II intron RNA folding investigated by UV cross-linking
-
2+ concentration on group II intron RNA folding investigated by UV cross-linking. Biochemistry 42:12466-80
-
(2003)
Biochemistry
, vol.42
, pp. 12466-12480
-
-
Noah, J.W.1
Lambowitz, A.M.2
-
85
-
-
0042525906
-
Group II intron splicing factors derived by diversification of an ancient RNA-binding domain
-
Ostheimer GJ, Williams-Carrier R, Belcher S, Osborne E, Gierke J, Barkan A. 2003. Group II intron splicing factors derived by diversification of an ancient RNA-binding domain. EMBO J. 22:3919-29
-
(2003)
EMBO J.
, vol.22
, pp. 3919-3929
-
-
Ostheimer, G.J.1
Williams-Carrier, R.2
Belcher, S.3
Osborne, E.4
Gierke, J.5
Barkan, A.6
-
86
-
-
0022551978
-
A self-splicing RNA excises an intron lariat
-
Peebles CL, Perlman PS, Mecklenburg KL, Petrillo ML, Tabor JH, et al. 1986. A self-splicing RNA excises an intron lariat. Cell 44:213-23
-
(1986)
Cell
, vol.44
, pp. 213-223
-
-
Peebles, C.L.1
Perlman, P.S.2
Mecklenburg, K.L.3
Petrillo, M.L.4
Tabor, J.H.5
-
87
-
-
0033571587
-
A factor related to pseudouridine synthases is required for chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii
-
Perron K, Goldschmidt-Clermont M, Rochaix JD. 1999. A factor related to pseudouridine synthases is required for chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii. EMBO J. 18:6481-90
-
(1999)
EMBO J.
, vol.18
, pp. 6481-6490
-
-
Perron, K.1
Goldschmidt-Clermont, M.2
Rochaix, J.D.3
-
88
-
-
0742289608
-
Use of computer-designed group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes
-
Perutka J, Wang W, Goerlitz D, Lambowitz AM. 2004. Use of computer-designed group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes. J. Mol. Biol. 336:421-39
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 421-439
-
-
Perutka, J.1
Wang, W.2
Goerlitz, D.3
Lambowitz, A.M.4
-
89
-
-
0035905817
-
A model for SOS-lesion-targeted mutations in Escherichia coli
-
Pham P, Bertram JG, O'Donnell M, Woodgate R, Goodman MF. 2001. A model for SOS-lesion-targeted mutations in Escherichia coli. Nature 409:366-70
-
(2001)
Nature
, vol.409
, pp. 366-370
-
-
Pham, P.1
Bertram, J.G.2
O'Donnell, M.3
Woodgate, R.4
Goodman, M.F.5
-
90
-
-
0029382528
-
2+-dependent crosslink traps an active form of domain 3 of a self-splicing group II intron
-
2+-dependent crosslink traps an active form of domain 3 of a self-splicing group II intron. RNA 1:828-40
-
(1995)
RNA
, vol.1
, pp. 828-840
-
-
Podar, M.1
Dib-Hajj, S.2
Perlman, P.S.3
-
91
-
-
0032103821
-
The architectural organization and mechanistic function of group II intron structural elements
-
Qin PZ, Pyle AM. 1998. The architectural organization and mechanistic function of group II intron structural elements. Curr. Opin. Struct. Biol. 8:301-8
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 301-308
-
-
Qin, P.Z.1
Pyle, A.M.2
-
92
-
-
3042725361
-
Many independent origins of trans-splicing of a plant mitochondrial group II intron
-
In press
-
Qiu YL, Palmer JD. 2004. Many independent origins of trans-splicing of a plant mitochondrial group II intron. J. Mol. Evol. In press
-
(2004)
J. Mol. Evol.
-
-
Qiu, Y.L.1
Palmer, J.D.2
-
93
-
-
0037743892
-
Retroids in archaea: Phylogeny and lateral origins
-
Rest JS, Mindell DP. 2003. Retroids in archaea: phylogeny and lateral origins. Mol. Biol. Evol. 20:1134-42
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1134-1142
-
-
Rest, J.S.1
Mindell, D.P.2
-
94
-
-
0035794689
-
Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii
-
Rivier C, Goldschmidt-Clermont M, Rochaix JD. 2001. Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii. EMBO J. 20:1765-73
-
(2001)
EMBO J.
, vol.20
, pp. 1765-1773
-
-
Rivier, C.1
Goldschmidt-Clermont, M.2
Rochaix, J.D.3
-
95
-
-
0033551494
-
RNA and protein catalysis in group II intron splicing and mobility reactions using purified components
-
Saldanha R, Chen B, Wank H, Matsuura M, Edwards J, Lambowitz AM. 1999. RNA and protein catalysis in group II intron splicing and mobility reactions using purified components. Biochemistry 38:9069-83
-
(1999)
Biochemistry
, vol.38
, pp. 9069-9083
-
-
Saldanha, R.1
Chen, B.2
Wank, H.3
Matsuura, M.4
Edwards, J.5
Lambowitz, A.M.6
-
96
-
-
0037073484
-
Characterization of the C-terminal DNA-binding/DNA endonuclease region of a group II intron-encoded protein
-
San Filippo J, Lambowitz AM. 2002. Characterization of the C-terminal DNA-binding/DNA endonuclease region of a group II intron-encoded protein. J. Mol. Biol. 324:933-51
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 933-951
-
-
San Filippo, J.1
Lambowitz, A.M.2
-
97
-
-
0037723901
-
Reverse transcriptase and reverse splicing activities encoded by the mobile group II intron cob I1 of fission yeast mitochondrial DNA
-
Schäfer B, Gan L, Perlman PS. 2003. Reverse transcriptase and reverse splicing activities encoded by the mobile group II intron cob I1 of fission yeast mitochondrial DNA. J. Mol. Biol. 329:191-206
-
(2003)
J. Mol. Biol.
, vol.329
, pp. 191-206
-
-
Schäfer, B.1
Gan, L.2
Perlman, P.S.3
-
98
-
-
10944271233
-
-
Deleted in proof
-
Deleted in proof
-
-
-
-
99
-
-
0022446227
-
Self-splicing of group II introns in vitro: Mapping of the branch point and mutational inhibition of lariat formation
-
Schmelzer C, Schweyen RJ. 1986. Self-splicing of group II introns in vitro: mapping of the branch point and mutational inhibition of lariat formation. Cell 46:557-65
-
(1986)
Cell
, vol.46
, pp. 557-565
-
-
Schmelzer, C.1
Schweyen, R.J.2
-
101
-
-
0026261876
-
Five easy pieces
-
Sharp PA. 1991. "Five easy pieces." Science 254:663
-
(1991)
Science
, vol.254
, pp. 663
-
-
Sharp, P.A.1
-
102
-
-
0030016467
-
Splicing of a group II intron in a functional transfer gene of Lactococcus lactis
-
Shearman C, Godon JJ, Gasson M. 1996. Splicing of a group II intron in a functional transfer gene of Lactococcus lactis. Mol. Microbiol. 21:45-53
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 45-53
-
-
Shearman, C.1
Godon, J.J.2
Gasson, M.3
-
103
-
-
0028151655
-
Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns
-
Shub DA, Goodrich-Blair H, Eddy SR. 1994. Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns. Trends Biochem. Sci. 19:402-4
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 402-404
-
-
Shub, D.A.1
Goodrich-Blair, H.2
Eddy, S.R.3
-
104
-
-
0742288004
-
Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif
-
Sigel RICO, Sashital DG, Abramovitz DL, Palmer III AG, Butcher SE, Pyle AM. 2004. Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif. Nat. Struct. Mol. Biol. 11:187-92
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 187-192
-
-
Sigel, R.I.C.O.1
Sashital, D.G.2
Abramovitz, D.L.3
Palmer III, A.G.4
Butcher, S.E.5
Pyle, A.M.6
-
105
-
-
0035367149
-
Interaction of a group II intron ribonucleoprotein endonuclease with its DNA target site investigated by DNA footprinting and modification interference
-
Singh NN, Lambowitz AM. 2001. Interaction of a group II intron ribonucleoprotein endonuclease with its DNA target site investigated by DNA footprinting and modification interference. J. Mol. Biol. 309:361-86
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 361-386
-
-
Singh, N.N.1
Lambowitz, A.M.2
-
106
-
-
0036307510
-
Binding of a group II intron-encoded reverse transcriptase/maturase to its high affinity intron RNA binding site involves sequence-specific recognition and autoregulates translation
-
Singh RN, Saldanha RJ, D'Souza LM, Lambowitz AM. 2002. Binding of a group II intron-encoded reverse transcriptase/maturase to its high affinity intron RNA binding site involves sequence-specific recognition and autoregulates translation. J. Mol. Biol. 318:287-303
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 287-303
-
-
Singh, R.N.1
Saldanha, R.J.2
D'Souza, L.M.3
Lambowitz, A.M.4
-
107
-
-
0025875989
-
A mobile group II intron of a naturally occurring rearranged mitochondrial genome in Kluyveromyces lactis
-
Skelly PJ, Hardy CM, Clark-Walker GD. 1991. A mobile group II intron of a naturally occurring rearranged mitochondrial genome in Kluyveromyces lactis. Curr. Genet. 20:115-20
-
(1991)
Curr. Genet.
, vol.20
, pp. 115-120
-
-
Skelly, P.J.1
Hardy, C.M.2
Clark-Walker, G.D.3
-
108
-
-
1842558979
-
Conserved target for group II intron insertion in relaxase genes of conjugative elements of Gram-positive bacteria
-
Staddon JH, Bryan EM, Manias DA, Dunny GM. 2004. Conserved target for group II intron insertion in relaxase genes of conjugative elements of Gram-positive bacteria. J. Bacteriol. 186:2393-401
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2393-2401
-
-
Staddon, J.H.1
Bryan, E.M.2
Manias, D.A.3
Dunny, G.M.4
-
109
-
-
0035901549
-
Visualizing the solvent-inaccessible core of a group II intron ribozyme
-
Swisher J, Duarte CM, Su LJ, Pyle AM. 2001. Visualizing the solvent-inaccessible core of a group II intron ribozyme. EMBO J. 20:2051-61
-
(2001)
EMBO J.
, vol.20
, pp. 2051-2061
-
-
Swisher, J.1
Duarte, C.M.2
Su, L.J.3
Pyle, A.M.4
-
110
-
-
0034844560
-
CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin
-
Till B, Schmitz-Linneweber C, Williams-Carrier R, Barkan A. 2001. CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin. RNA 7:1227-38
-
(2001)
RNA
, vol.7
, pp. 1227-1238
-
-
Till, B.1
Schmitz-Linneweber, C.2
Williams-Carrier, R.3
Barkan, A.4
-
111
-
-
0034910710
-
Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases
-
Toor N, Hausner G, Zimmerly S. 2001. Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases. RNA 7:1142-52
-
(2001)
RNA
, vol.7
, pp. 1142-1152
-
-
Toor, N.1
Hausner, G.2
Zimmerly, S.3
-
112
-
-
0036849042
-
Identification of a family of group II introns encoding LAGLIDADG ORFs typical of group I introns
-
Toor N, Zimmerly S. 2002. Identification of a family of group II introns encoding LAGLIDADG ORFs typical of group I introns. RNA 8:1373-77
-
(2002)
RNA
, vol.8
, pp. 1373-1377
-
-
Toor, N.1
Zimmerly, S.2
-
113
-
-
0037343641
-
Bacteria and archaea group II introns: Additional mobile genetic elements in the environment
-
Toro N. 2003. Bacteria and archaea group II introns: additional mobile genetic elements in the environment. Environ. Microbiol. 5:143-51
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 143-151
-
-
Toro, N.1
-
114
-
-
0037121082
-
Identification and characterization of bacterial class E group II introns
-
Toro N, Molina-Sánchez MD, Fernández-López M. 2002. Identification and characterization of bacterial class E group II introns. Gene 299:245-50
-
(2002)
Gene
, vol.299
, pp. 245-250
-
-
Toro, N.1
Molina-Sánchez, M.D.2
Fernández-López, M.3
-
115
-
-
0022550426
-
Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro
-
van der Veen R, Arnberg AC, van der Horst G, Bonen L, Tabak HF, Grivell LA. 1986. Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro. Cell 44:225-34
-
(1986)
Cell
, vol.44
, pp. 225-234
-
-
Van Der Veen, R.1
Arnberg, A.C.2
Van Der Horst, G.3
Bonen, L.4
Tabak, H.F.5
Grivell, L.A.6
-
116
-
-
0345062264
-
Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants
-
Vogel J, Börner T, Hess WR. 1999. Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants. Nucleic Acids Res. 27:3866-74
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 3866-3874
-
-
Vogel, J.1
Börner, T.2
Hess, W.R.3
-
117
-
-
0033180584
-
A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA
-
Wank H, San Filippo J, Singh RN, Matsuura M, Lambowitz AM. 1999. A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA. Mol. Cell 4:239-50
-
(1999)
Mol. Cell
, vol.4
, pp. 239-250
-
-
Wank, H.1
San Filippo, J.2
Singh, R.N.3
Matsuura, M.4
Lambowitz, A.M.5
-
118
-
-
0032539968
-
Sequence specificity of a group II intron ribozyme: Multiple mechanisms for promoting unusually high discrimination against mismatched targets
-
Xiang Q, Qin PZ, Michels WJ, Freeland K, Pyle AM. 1998. Sequence specificity of a group II intron ribozyme: multiple mechanisms for promoting unusually high discrimination against mismatched targets. Biochemistry 37:3839-49
-
(1998)
Biochemistry
, vol.37
, pp. 3839-3849
-
-
Xiang, Q.1
Qin, P.Z.2
Michels, W.J.3
Freeland, K.4
Pyle, A.M.5
-
119
-
-
0032566493
-
Group II intron mobility in yeast mitochondria: Target DNA-primed reverse transcription activity of aI1 and reverse splicing into DNA transposition sites in vitro
-
Yang J, Mohr G, Perlman PS, Lambowitz AM. 1998. Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity of aI1 and reverse splicing into DNA transposition sites in vitro. J. Mol. Biol. 282:505-23
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 505-523
-
-
Yang, J.1
Mohr, G.2
Perlman, P.S.3
Lambowitz, A.M.4
-
120
-
-
0029931406
-
Efficient integration of an intron RNA into double-stranded DNA by reverse splicing
-
Yang J, Zimmerly S, Perlman PS, Lambowitz AM. 1996. Efficient integration of an intron RNA into double-stranded DNA by reverse splicing. Nature 381:332-35
-
(1996)
Nature
, vol.381
, pp. 332-335
-
-
Yang, J.1
Zimmerly, S.2
Perlman, P.S.3
Lambowitz, A.M.4
-
121
-
-
0037086011
-
Structural insights into group II intron catalysis and branch-site selection
-
Zhang L, Doudna JA. 2002. Structural insights into group II intron catalysis and branch-site selection. Science 295:2084-88
-
(2002)
Science
, vol.295
, pp. 2084-2088
-
-
Zhang, L.1
Doudna, J.A.2
-
122
-
-
0029449864
-
The Euglena gracilis intron-encoded mat2 locus is interrupted by three additional group II introns
-
Zhang L, Jenkins KP, Stutz E, Hallick RB, 1995. The Euglena gracilis intron-encoded mat2 locus is interrupted by three additional group II introns. RNA 1:1079-88
-
(1995)
RNA
, vol.1
, pp. 1079-1088
-
-
Zhang, L.1
Jenkins, K.P.2
Stutz, E.3
Hallick, R.B.4
-
123
-
-
0037444087
-
Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker
-
Zhong J, Karberg M, Lambowitz AM. 2003. Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker. Nucleic Acids Res. 31:1656-64
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 1656-1664
-
-
Zhong, J.1
Karberg, M.2
Lambowitz, A.M.3
-
124
-
-
0042236980
-
Group II intron mobility using nascent strands at DNA replication forks to prime reverse transcription
-
Zhong J, Lambowitz AM. 2003. Group II intron mobility using nascent strands at DNA replication forks to prime reverse transcription. EMBO J. 22:4555-65
-
(2003)
EMBO J.
, vol.22
, pp. 4555-4565
-
-
Zhong, J.1
Lambowitz, A.M.2
-
125
-
-
0033865175
-
Regulation of intron function: Efficient splicing in vivo of a bacterial group II intron requires a functional promoter within the intron
-
Zhou L, Manias DA, Dunny GM. 2000. Regulation of intron function: efficient splicing in vivo of a bacterial group II intron requires a functional promoter within the intron. Mol. Microbiol. 37:639-51
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 639-651
-
-
Zhou, L.1
Manias, D.A.2
Dunny, G.M.3
-
126
-
-
0028859580
-
A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility
-
Zimmerly S, Guo H, Eskes R, Yang J, Perlman PS, Lambowitz AM. 1995. A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility. Cell 83:529-38
-
(1995)
Cell
, vol.83
, pp. 529-538
-
-
Zimmerly, S.1
Guo, H.2
Eskes, R.3
Yang, J.4
Perlman, P.S.5
Lambowitz, A.M.6
-
127
-
-
0029162089
-
Group II intron mobility occurs by target DNA-primed reverse transcription
-
Zimmerly S, Guo H, Perlman PS, Lambowitz AM. 1995. Group II intron mobility occurs by target DNA-primed reverse transcription. Cell 82:545-54
-
(1995)
Cell
, vol.82
, pp. 545-554
-
-
Zimmerly, S.1
Guo, H.2
Perlman, P.S.3
Lambowitz, A.M.4
-
128
-
-
0035282874
-
Phylogenetic relationships among group II intron ORFs
-
Zimmerly S, Hausner G, Wu X. 2001. Phylogenetic relationships among group II intron ORFs. Nucleic Acids Res. 29:1238-50
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1238-1250
-
-
Zimmerly, S.1
Hausner, G.2
Wu, X.3
-
129
-
-
0033546397
-
Group II intron reverse transcriptase in yeast mitochondria. Stabilization and regulation of reverse transcriptase activity by the intron RNA
-
Zimmerly S, Moran JV, Perlman PS, Lambowitz AM. 1999, Group II intron reverse transcriptase in yeast mitochondria. Stabilization and regulation of reverse transcriptase activity by the intron RNA. J. Mol. Biol. 289:473-90
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 473-490
-
-
Zimmerly, S.1
Moran, J.V.2
Perlman, P.S.3
Lambowitz, A.M.4
|