-
1
-
-
77954070546
-
Control of membrane protein topology by a single C-terminal residue
-
Seppala S, Slusky JS, Lloris-Garcera P, Rapp M, von Heijne G, (2010). Control of membrane protein topology by a single C-terminal residue. Science 328: 1698-1700.
-
(2010)
Science
, vol.328
, pp. 1698-1700
-
-
Seppala, S.1
Slusky, J.S.2
Lloris-Garcera, P.3
Rapp, M.4
Von Heijne, G.5
-
3
-
-
2342558053
-
The structure of the first coordination shell in liquid water
-
Wernet P, Nordlund D, Bergmann U, Cavalleri M, Odelius M, Ogasawara H, Näslund LR, Hirsch TK, Ojamäe L, Glatzel P, Pettersson LGM, Nilsson A, (2004). The structure of the first coordination shell in liquid water. Science 304: 995-999.
-
(2004)
Science
, vol.304
, pp. 995-999
-
-
Wernet, P.1
Nordlund, D.2
Bergmann, U.3
Cavalleri, M.4
Odelius, M.5
Ogasawara, H.6
Näslund, L.R.7
Hirsch, T.K.8
Ojamäe, L.9
Glatzel, P.10
Pettersson, L.G.M.11
Nilsson, A.12
-
4
-
-
85047924580
-
-
Israelachvili J.N. editor. 3rd ed. Boston: Academic Press
-
Israelachvili JN, editor (2011). Intermolecular and surface forces, 3rd ed. Boston: Academic Press.
-
(2011)
Intermolecular and Surface Forces
-
-
-
6
-
-
84906884220
-
Life at the border: Adaptation of proteins to anisotropic membrane environment
-
Pogozheva ID, Mosberg HI, Lomize AL, (2014). Life at the border: adaptation of proteins to anisotropic membrane environment. Protein Sci 23: 1165-1196.
-
(2014)
Protein Sci
, vol.23
, pp. 1165-1196
-
-
Pogozheva, I.D.1
Mosberg, H.I.2
Lomize, A.L.3
-
7
-
-
66549128460
-
The role of lipid composition for insertion and stabilization of amino acids in membranes
-
Johansson AC, Lindahl E, (2009). The role of lipid composition for insertion and stabilization of amino acids in membranes. J Chem Phys 130.
-
(2009)
J Chem Phys
, vol.130
-
-
Johansson, A.C.1
Lindahl, E.2
-
8
-
-
84895532708
-
Cardiolipin-dependent formation of mitochondrial respiratory supercomplexes
-
Mileykovskaya E, Dowhan W, (2014). Cardiolipin-dependent formation of mitochondrial respiratory supercomplexes. Chem Phys Lipids 179: 42-48.
-
(2014)
Chem Phys Lipids
, vol.179
, pp. 42-48
-
-
Mileykovskaya, E.1
Dowhan, W.2
-
9
-
-
84878723802
-
In vitro reconstitution of lipid-dependent dual topology and postassembly topological switching of a membrane protein
-
Vitrac H, Bogdanov M, Dowhan W, (2013). In vitro reconstitution of lipid-dependent dual topology and postassembly topological switching of a membrane protein. Proc Natl Acad Sci USA 110: 9338-9343.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 9338-9343
-
-
Vitrac, H.1
Bogdanov, M.2
Dowhan, W.3
-
10
-
-
59449086462
-
Lipid-engineered Escherichia coli membranes reveal critical lipid headgroup size for protein function
-
Wikström M, Kelly AA, Georgiev A, Eriksson HM, Klement MR, Bogdanov M, Dowhan W, Wieslander R, (2009). Lipid-engineered Escherichia coli membranes reveal critical lipid headgroup size for protein function. J Biol Chem 284: 954-965.
-
(2009)
J Biol Chem
, vol.284
, pp. 954-965
-
-
Wikström, M.1
Kelly, A.A.2
Georgiev, A.3
Eriksson, H.M.4
Klement, M.R.5
Bogdanov, M.6
Dowhan, W.7
Wieslander, R.8
-
11
-
-
84964312418
-
Phospholipase d signaling pathways and phosphatidic acid as therapeutic targets in cancer
-
Bruntz RC, Lindsley CW, Brown HA, (2014). Phospholipase d signaling pathways and phosphatidic acid as therapeutic targets in cancer. Pharmacol Rev 66: 1033-1079.
-
(2014)
Pharmacol Rev
, vol.66
, pp. 1033-1079
-
-
Bruntz, R.C.1
Lindsley, C.W.2
Brown, H.A.3
-
13
-
-
33846058198
-
LMSD: LIPID MAPS structure database
-
Sud M, Fahy E, Cotter D, Brown A, Dennis EA, Glass CK, Merrill AH, Murphy RC, Raetz CR, Russell DW, Subramaniam S, (2007). LMSD: LIPID MAPS structure database. Nucleic Acids Res 35: D527-D532.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. D527-D532
-
-
Sud, M.1
Fahy, E.2
Cotter, D.3
Brown, A.4
Dennis, E.A.5
Glass, C.K.6
Merrill, A.H.7
Murphy, R.C.8
Raetz, C.R.9
Russell, D.W.10
Subramaniam, S.11
-
14
-
-
7044264920
-
Diversity and versatility of lipid-protein interactions revealed by molecular genetic approaches
-
Dowhan W, Mileykovskaya E, Bogdanov M, (2004). Diversity and versatility of lipid-protein interactions revealed by molecular genetic approaches. Biochim Biophys Acta 1666: 19-39.
-
(2004)
Biochim Biophys Acta
, vol.1666
, pp. 19-39
-
-
Dowhan, W.1
Mileykovskaya, E.2
Bogdanov, M.3
-
15
-
-
0022080948
-
Intrinsic curvature hypothesis for biomembrane lipid composition: A role for nonbilayer lipids
-
Gruner SM, (1985). Intrinsic curvature hypothesis for biomembrane lipid composition: a role for nonbilayer lipids. Proc Natl Acad Sci USA 82: 3665-3669.
-
(1985)
Proc Natl Acad Sci USA
, vol.82
, pp. 3665-3669
-
-
Gruner, S.M.1
-
16
-
-
84878131033
-
Checks and balances in membrane phospholipid class and acyl chain homeostasis, the yeast perspective
-
de Kroon AIPM, Rijken PJ, De Smet CH, (2013). Checks and balances in membrane phospholipid class and acyl chain homeostasis, the yeast perspective. Prog Lipid Res 52: 374-394.
-
(2013)
Prog Lipid Res
, vol.52
, pp. 374-394
-
-
De Kroon, A.1
Rijken, P.J.2
De Smet, C.H.3
-
17
-
-
79957470462
-
Lipid-protein interactions
-
Lee AG, (2011). Lipid-protein interactions. Biochem Soc Trans 39: 761-766.
-
(2011)
Biochem Soc Trans
, vol.39
, pp. 761-766
-
-
Lee, A.G.1
-
18
-
-
67650732710
-
Lipid-dependent membrane protein topogenesis
-
Dowhan W, Bogdanov M, (2009). Lipid-dependent membrane protein topogenesis. Annu Rev Biochem 78: 515-540.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 515-540
-
-
Dowhan, W.1
Bogdanov, M.2
-
19
-
-
7044224838
-
Membrane fluidity and its roles in the perception of environmental signals
-
Los DA, Murata N, (2004). Membrane fluidity and its roles in the perception of environmental signals. Biochim Biophys Acta 1666: 142-157.
-
(2004)
Biochim Biophys Acta
, vol.1666
, pp. 142-157
-
-
Los, D.A.1
Murata, N.2
-
20
-
-
0026729232
-
Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of X-ray and neutron diffraction data. III. Complete structure
-
Wiener MC, White SH, (1992). Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of X-ray and neutron diffraction data. III. Complete structure. Biophys J 61: 434-447.
-
(1992)
Biophys J
, vol.61
, pp. 434-447
-
-
Wiener, M.C.1
White, S.H.2
-
21
-
-
37249037182
-
Molecular code for transmembrane-helix recognition by the sec61 translocon
-
Hessa T, Meindl-Beinker NM, Bernsel A, Kim H, Sato Y, Lerch-Bader M, Nilsson I, White SH, von Heijne G, (2007). Molecular code for transmembrane-helix recognition by the sec61 translocon. Nature 450: 1026-1030.
-
(2007)
Nature
, vol.450
, pp. 1026-1030
-
-
Hessa, T.1
Meindl-Beinker, N.M.2
Bernsel, A.3
Kim, H.4
Sato, Y.5
Lerch-Bader, M.6
Nilsson, I.7
White, S.H.8
Von Heijne, G.9
-
22
-
-
0027179487
-
Phospholipids in animal eukaryotic membranes: Transverse asymmetry and movement
-
Zachowski A, (1993). Phospholipids in animal eukaryotic membranes: transverse asymmetry and movement. Biochem J 294: 1-14.
-
(1993)
Biochem J
, vol.294
, pp. 1-14
-
-
Zachowski, A.1
-
23
-
-
84898993452
-
The basic structure and dynamics of cell membranes: An update of the Singer-Nicolson model
-
Goni FM, (2014). The basic structure and dynamics of cell membranes: an update of the Singer-Nicolson model. Biochim Biophys Acta 1838: 1467-1476.
-
(2014)
Biochim Biophys Acta
, vol.1838
, pp. 1467-1476
-
-
Goni, F.M.1
-
24
-
-
70349469585
-
Domains in biological membranes
-
Lindner R, Naim HY, (2009). Domains in biological membranes. Exp Cell Res 315: 2871-2878.
-
(2009)
Exp Cell Res
, vol.315
, pp. 2871-2878
-
-
Lindner, R.1
Naim, H.Y.2
-
25
-
-
33747038638
-
Lipid domains in bacterial membranes
-
Matsumoto K, Kusaka J, Nishibori A, Hara H, (2006). Lipid domains in bacterial membranes. Mol Microbiol 61: 1110-1117.
-
(2006)
Mol Microbiol
, vol.61
, pp. 1110-1117
-
-
Matsumoto, K.1
Kusaka, J.2
Nishibori, A.3
Hara, H.4
-
26
-
-
0015514472
-
The fluid mosaic model of the structure of cell membranes
-
Singer SJ, Nicolson GL, (1972). The fluid mosaic model of the structure of cell membranes. Science 175: 720-731.
-
(1972)
Science
, vol.175
, pp. 720-731
-
-
Singer, S.J.1
Nicolson, G.L.2
-
27
-
-
0031740283
-
How lipids interact with an intrinsic membrane protein: The case of the calcium pump
-
Lee AG, (1998). How lipids interact with an intrinsic membrane protein: the case of the calcium pump. Biochim Biophys Acta 1376: 381-390.
-
(1998)
Biochim Biophys Acta
, vol.1376
, pp. 381-390
-
-
Lee, A.G.1
-
28
-
-
0015473745
-
Membrane proteins
-
Guidotti G, (1972) Membrane proteins. Annu Rev Biochem 41: 731-752.
-
(1972)
Annu Rev Biochem
, vol.41
, pp. 731-752
-
-
Guidotti, G.1
-
29
-
-
33845424528
-
Amino-acid solvation structure in transmembrane helices from molecular dynamics simulations
-
Johansson AC, Lindahl E, (2006). Amino-acid solvation structure in transmembrane helices from molecular dynamics simulations. Biophys J 91: 4450-4463.
-
(2006)
Biophys J
, vol.91
, pp. 4450-4463
-
-
Johansson, A.C.1
Lindahl, E.2
-
30
-
-
77954299061
-
A comprehensive comparison of transmembrane domains reveals organelle-specific properties
-
Sharpe HJ, Stevens TJ, Munro S, (2010). A comprehensive comparison of transmembrane domains reveals organelle-specific properties. Cell 142: 158-169.
-
(2010)
Cell
, vol.142
, pp. 158-169
-
-
Sharpe, H.J.1
Stevens, T.J.2
Munro, S.3
-
31
-
-
0038364008
-
Lipid-protein interactions in biological membranes: A structural perspective
-
Lee AG, (2003) Lipid-protein interactions in biological membranes: a structural perspective. Biochim Biophys Acta 1612: 1-40.
-
(2003)
Biochim Biophys Acta
, vol.1612
, pp. 1-40
-
-
Lee, A.G.1
-
32
-
-
0032509102
-
Proline-induced disruption of a transmembrane alpha-helix in its natural environment
-
Nilsson I, Saaf A, Whitley P, Gafvelin G, Waller C, von Heijne G, (1998). Proline-induced disruption of a transmembrane alpha-helix in its natural environment. J Mol Biol 284: 1165-1175.
-
(1998)
J Mol Biol
, vol.284
, pp. 1165-1175
-
-
Nilsson, I.1
Saaf, A.2
Whitley, P.3
Gafvelin, G.4
Waller, C.5
Von Heijne, G.6
-
33
-
-
0031740415
-
Hydrophobic mismatch between proteins and lipids in membranes
-
Killian JA, (1998). Hydrophobic mismatch between proteins and lipids in membranes. Biochim Biophys Acta 1376: 401-415.
-
(1998)
Biochim Biophys Acta
, vol.1376
, pp. 401-415
-
-
Killian, J.A.1
-
34
-
-
7244244196
-
Lipids do influence protein function-the hydrophobic matching hypothesis revisited
-
Jensen M, Mouritsen OG, (2004). Lipids do influence protein function-the hydrophobic matching hypothesis revisited. Biochim Biophys Acta 1666: 205-226.
-
(2004)
Biochim Biophys Acta
, vol.1666
, pp. 205-226
-
-
Jensen, M.1
Mouritsen, O.G.2
-
35
-
-
0032581038
-
Influence of lipid/peptide hydrophobic mismatch on the thickness of diacylphosphatidylcholine bilayers. A 2H NMR and ESR study using designed transmembrane alpha-helical peptides and gramicidin a
-
de Planque MR, Greathouse DV, Koeppe RE, Schafer H, Marsh D, Killian JA, (1998). Influence of lipid/peptide hydrophobic mismatch on the thickness of diacylphosphatidylcholine bilayers. A 2H NMR and ESR study using designed transmembrane alpha-helical peptides and gramicidin a. Biochemistry 37: 9333-9345.
-
(1998)
Biochemistry
, vol.37
, pp. 9333-9345
-
-
De Planque, M.R.1
Greathouse, D.V.2
Koeppe, R.E.3
Schafer, H.4
Marsh, D.5
Killian, J.A.6
-
36
-
-
1642570286
-
Modulation of the bilayer thickness of exocytic pathway membranes by membrane proteins rather than cholesterol
-
Mitra K, Ubarretxena-Belandia I, Taguchi T, Warren G, Engelman DM, (2004) Modulation of the bilayer thickness of exocytic pathway membranes by membrane proteins rather than cholesterol. Proc. Natl. Acad. Sci. U.S.A. 101: 4083-4088.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 4083-4088
-
-
Mitra, K.1
Ubarretxena-Belandia, I.2
Taguchi, T.3
Warren, G.4
Engelman, D.M.5
-
37
-
-
12244255728
-
Hydrophobic mismatch between helices and lipid bilayers
-
Weiss TM, van der Wel PC, Killian JA, Koeppe RE, Huang HW, (2003) Hydrophobic mismatch between helices and lipid bilayers. Biophys J 84: 379-385.
-
(2003)
Biophys J
, vol.84
, pp. 379-385
-
-
Weiss, T.M.1
Van Der Wel, P.C.2
Killian, J.A.3
Koeppe, R.E.4
Huang, H.W.5
-
38
-
-
0035979370
-
Modulation of na,K-ATPase and Na-ATPase activity by phospholipids and cholesterol. I. Steady-state kinetics
-
Cornelius F, (2001). Modulation of na,K-ATPase and Na-ATPase activity by phospholipids and cholesterol. I. Steady-state kinetics. Biochemistry 40: 8842-8851.
-
(2001)
Biochemistry
, vol.40
, pp. 8842-8851
-
-
Cornelius, F.1
-
39
-
-
0029165107
-
An investigation of the role of transmembrane domains in golgi protein retention
-
Munro S, (1995). An investigation of the role of transmembrane domains in golgi protein retention. EMBO J 14: 4695-4704.
-
(1995)
EMBO J
, vol.14
, pp. 4695-4704
-
-
Munro, S.1
-
40
-
-
84881428576
-
Kv7.1 ion channels require a lipid to couple voltage sensing to pore opening
-
Zaydman MA, Silva JR, Delaloye K, Li Y, Liang H, Larsson HP, Shi J, Cui J, (2013). kv7.1 ion channels require a lipid to couple voltage sensing to pore opening. Proc Natl Acad Sci USA 110: 13180-13185.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 13180-13185
-
-
Zaydman, M.A.1
Silva, J.R.2
Delaloye, K.3
Li, Y.4
Liang, H.5
Larsson, H.P.6
Shi, J.7
Cui, J.8
-
41
-
-
48249116482
-
Pip2 is a necessary cofactor for ion channel function: How and why?
-
Suh BC, Hille B, (2008). pip2 is a necessary cofactor for ion channel function: how and why? Annu Rev Biophys 37: 175-195.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 175-195
-
-
Suh, B.C.1
Hille, B.2
-
42
-
-
33845313646
-
PI(3,4,5)p3 and PI(4,5)p2 lipids target proteins with polybasic clusters to the plasma membrane
-
Heo WD, Inoue T, Park WS, Kim ML, Park BO, Wandless TJ, Meyer T, (2006). PI(3,4,5)p3 and PI(4,5)p2 lipids target proteins with polybasic clusters to the plasma membrane. Science 314: 1458-1461.
-
(2006)
Science
, vol.314
, pp. 1458-1461
-
-
Heo, W.D.1
Inoue, T.2
Park, W.S.3
Kim, M.L.4
Park, B.O.5
Wandless, T.J.6
Meyer, T.7
-
43
-
-
84896714737
-
Ionic protein-lipid interaction at the plasma membrane: What can the charge do?
-
Li L, Shi X, Guo X, Li H, Xu C, (2014). Ionic protein-lipid interaction at the plasma membrane: what can the charge do? Trends Biochem Sci 39: 130-140.
-
(2014)
Trends Biochem Sci
, vol.39
, pp. 130-140
-
-
Li, L.1
Shi, X.2
Guo, X.3
Li, H.4
Xu, C.5
-
44
-
-
33845505655
-
Curvature and hydrophobic forces drive oligomerization and modulate activity of rhodopsin in membranes
-
Botelho AV, Huber T, Sakmar TP, Brown MF, (2006). Curvature and hydrophobic forces drive oligomerization and modulate activity of rhodopsin in membranes. Biophys J 91: 4464-4477.
-
(2006)
Biophys J
, vol.91
, pp. 4464-4477
-
-
Botelho, A.V.1
Huber, T.2
Sakmar, T.P.3
Brown, M.F.4
-
45
-
-
12344330612
-
A study of the membrane-water interface region of membrane proteins
-
Granseth E, von Heijne G, Elofsson A, (2005). A study of the membrane-water interface region of membrane proteins. J Mol Biol 346: 377-385.
-
(2005)
J Mol Biol
, vol.346
, pp. 377-385
-
-
Granseth, E.1
Von Heijne, G.2
Elofsson, A.3
-
46
-
-
0026451081
-
Intracellular signaling by hydrolysis of phospholipids and activation of protein kinase C
-
Nishizuka Y, (1992). Intracellular signaling by hydrolysis of phospholipids and activation of protein kinase C. Science 258: 607-614.
-
(1992)
Science
, vol.258
, pp. 607-614
-
-
Nishizuka, Y.1
-
47
-
-
0034923677
-
The signal recognition particle
-
Keenan RJ, Freymann DM, Stroud RM, Walter P, (2001). The signal recognition particle. Annu Rev Biochem 70: 755-775.
-
(2001)
Annu Rev Biochem
, vol.70
, pp. 755-775
-
-
Keenan, R.J.1
Freymann, D.M.2
Stroud, R.M.3
Walter, P.4
-
48
-
-
7544222026
-
SRP meets the ribosome
-
Wild K, Halic M, Sinning I, Beckmann R, (2004). SRP meets the ribosome. Nat Struct Mol Biol 11: 1049-1053.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 1049-1053
-
-
Wild, K.1
Halic, M.2
Sinning, I.3
Beckmann, R.4
-
49
-
-
0031473345
-
Alignment of conduits for the nascent polypeptide chain in the ribosome-sec61 complex
-
Beckmann R, Bubeck D, Grassucci R, Penczek P, Verschoor A, Blobel G, Frank J, (1997). Alignment of conduits for the nascent polypeptide chain in the ribosome-sec61 complex. Science 278: 2123-2126.
-
(1997)
Science
, vol.278
, pp. 2123-2126
-
-
Beckmann, R.1
Bubeck, D.2
Grassucci, R.3
Penczek, P.4
Verschoor, A.5
Blobel, G.6
Frank, J.7
-
50
-
-
48249095616
-
How translocons select transmembrane helices
-
White SH, von Heijne G, (2008). How translocons select transmembrane helices. Annu Rev Biophys 37: 23-42.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 23-42
-
-
White, S.H.1
Von Heijne, G.2
-
51
-
-
0347192985
-
X-ray structure of a protein-conducting channel
-
Van den Berg B, Clemons WM, Collinson I, Modis Y, Hartmann E, Harrison SC, Rapoport TA, (2004). X-ray structure of a protein-conducting channel. Nature 427: 36-44.
-
(2004)
Nature
, vol.427
, pp. 36-44
-
-
Van Den Berg, B.1
Clemons, W.M.2
Collinson, I.3
Modis, Y.4
Hartmann, E.5
Harrison, S.C.6
Rapoport, T.A.7
-
52
-
-
78049253482
-
Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes
-
Egea PF, Stroud RM, (2010). Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes. Proc Natl Acad Sci USA 107: 17182-17187.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 17182-17187
-
-
Egea, P.F.1
Stroud, R.M.2
-
53
-
-
84893630228
-
Structures of the sec61 complex engaged in nascent peptide translocation or membrane insertion
-
Gogala M, Becker T, Beatrix B, Armache J, Barrio-Garcia C, Berningshausen O, Beckman R, (2014). Structures of the sec61 complex engaged in nascent peptide translocation or membrane insertion. Nature 506: 107-110.
-
(2014)
Nature
, vol.506
, pp. 107-110
-
-
Gogala, M.1
Becker, T.2
Beatrix, B.3
Armache, J.4
Barrio-Garcia, C.5
Berningshausen, O.6
Beckman, R.7
-
54
-
-
71549167617
-
Structure of monomeric yeast and mammalian sec61 complexes interacting with the translating ribosome
-
Becker T, Bhushan S, Jarasch A, Armache J, Funes S, Jossinet F, Gumbart J, Mielke T, Berninghausen O, Schulten K, Westhof E, Gilmore R, Mandon ECBR, (2009). Structure of monomeric yeast and mammalian sec61 complexes interacting with the translating ribosome. Science 326: 1369-1373.
-
(2009)
Science
, vol.326
, pp. 1369-1373
-
-
Becker, T.1
Bhushan, S.2
Jarasch, A.3
Armache, J.4
Funes, S.5
Jossinet, F.6
Gumbart, J.7
Mielke, T.8
Berninghausen, O.9
Schulten, K.10
Westhof, E.11
Gilmore, R.12
Mandon, E.13
-
56
-
-
4143101547
-
The machinery of membrane protein assembly
-
White SH, von Heijne G, (2004). The machinery of membrane protein assembly. Curr Opin Struct Biol 14: 397-404.
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 397-404
-
-
White, S.H.1
Von Heijne, G.2
-
57
-
-
18544380083
-
Disulfide bridge formation between SecY and a translocating polypeptide localizes the translocation pore to the center of SecY
-
Cannon KS, Or E, Clemons WM, Shibata Y, Rapoport TA, (2005). Disulfide bridge formation between SecY and a translocating polypeptide localizes the translocation pore to the center of SecY. J Cell Biol 169: 219-225.
-
(2005)
J Cell Biol
, vol.169
, pp. 219-225
-
-
Cannon, K.S.1
Or, E.2
Clemons, W.M.3
Shibata, Y.4
Rapoport, T.A.5
-
58
-
-
0141992130
-
Cotranslational protein integration into the ER membrane is mediated by the binding of nascent chains to translocon proteins
-
McCormick PJ, Miao Y, Shao Y, Lin J, Johnson AE, (2003). Cotranslational protein integration into the ER membrane is mediated by the binding of nascent chains to translocon proteins. Mol Cell 12: 329-341.
-
(2003)
Mol Cell
, vol.12
, pp. 329-341
-
-
McCormick, P.J.1
Miao, Y.2
Shao, Y.3
Lin, J.4
Johnson, A.E.5
-
59
-
-
77950448361
-
Hydrophobically stabilized open state for the lateral gate of the sec translocon
-
Zhang B, Miller TF, (2010). Hydrophobically stabilized open state for the lateral gate of the sec translocon. Proc Natl Acad Sci USA 107: 5399-5404.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 5399-5404
-
-
Zhang, B.1
Miller, T.F.2
-
60
-
-
16244373735
-
Architecture of the ribosome-channel complex derived from native membranes
-
Menetret JF, Hegde RS, Heinrich SU, Chandramouli P, Ludtke SJ, Rapoport TA, Akey CW, (2005). Architecture of the ribosome-channel complex derived from native membranes. J Mol Biol 348: 445-457.
-
(2005)
J Mol Biol
, vol.348
, pp. 445-457
-
-
Menetret, J.F.1
Hegde, R.S.2
Heinrich, S.U.3
Chandramouli, P.4
Ludtke, S.J.5
Rapoport, T.A.6
Akey, C.W.7
-
61
-
-
84866388574
-
Bacterial protein translocation requires only one copy of the SecY complex in vivo
-
Park E, Rapoport TA, (2012). Bacterial protein translocation requires only one copy of the SecY complex in vivo. J Cell Biol 198: 881-893.
-
(2012)
J Cell Biol
, vol.198
, pp. 881-893
-
-
Park, E.1
Rapoport, T.A.2
-
62
-
-
0037450802
-
Substrate-specific function of the translocon-associated protein complex during translocation across the ER membrane
-
Fons RD, Bogert BA, Hegde RS, (2003). Substrate-specific function of the translocon-associated protein complex during translocation across the ER membrane. J Cell Biol 160: 529-539.
-
(2003)
J Cell Biol
, vol.160
, pp. 529-539
-
-
Fons, R.D.1
Bogert, B.A.2
Hegde, R.S.3
-
63
-
-
0036906637
-
Different transmembrane domains associate with distinct endoplasmic reticulum components during membrane integration of a polytopic protein
-
Meacock SL, Lecomte FJ, Crawshaw SG, High S, (2002). Different transmembrane domains associate with distinct endoplasmic reticulum components during membrane integration of a polytopic protein. Mol Biol Cell 13: 4114-4129.
-
(2002)
Mol Biol Cell
, vol.13
, pp. 4114-4129
-
-
Meacock, S.L.1
Lecomte, F.J.2
Crawshaw, S.G.3
High, S.4
-
64
-
-
0032113448
-
Regulation of protein topology by transacting factors at the endoplasmic reticulum
-
Hegde RS, Voigt S, Lingappa VR, (1998). Regulation of protein topology by transacting factors at the endoplasmic reticulum. Mol Cell 2: 85-91.
-
(1998)
Mol Cell
, vol.2
, pp. 85-91
-
-
Hegde, R.S.1
Voigt, S.2
Lingappa, V.R.3
-
65
-
-
84901976635
-
How YidC inserts and folds proteins across a membrane
-
Dalbey RE, Kuhn A, (2014). How YidC inserts and folds proteins across a membrane. Nat Struct Mol Biol 21: 435-436.
-
(2014)
Nat Struct Mol Biol
, vol.21
, pp. 435-436
-
-
Dalbey, R.E.1
Kuhn, A.2
-
66
-
-
0026504192
-
A protein of the endoplasmic reticulum involved early in polypeptide translocation
-
Gorlich D, Hartmann E, Prehn S, Rapoport TA, (1992). A protein of the endoplasmic reticulum involved early in polypeptide translocation. Nature 357: 47-52.
-
(1992)
Nature
, vol.357
, pp. 47-52
-
-
Gorlich, D.1
Hartmann, E.2
Prehn, S.3
Rapoport, T.A.4
-
67
-
-
0032489505
-
TRAM regulates the exposure of nascent secretory proteins to the cytosol during translocation into the endoplasmic reticulum
-
Hegde RS, Voigt S, Rapoport TA, Lingappa VR, (1998). TRAM regulates the exposure of nascent secretory proteins to the cytosol during translocation into the endoplasmic reticulum. Cell 92: 621-631.
-
(1998)
Cell
, vol.92
, pp. 621-631
-
-
Hegde, R.S.1
Voigt, S.2
Rapoport, T.A.3
Lingappa, V.R.4
-
68
-
-
84884362290
-
TRAP assists membrane protein topogenesis at the mammalian ER membrane
-
Sommer N, Junne T, Kalies KU, Spiess M, Hartmann E, (2013). TRAP assists membrane protein topogenesis at the mammalian ER membrane. Biochim Biophys Acta 1833: 3104-3111.
-
(2013)
Biochim Biophys Acta
, vol.1833
, pp. 3104-3111
-
-
Sommer, N.1
Junne, T.2
Kalies, K.U.3
Spiess, M.4
Hartmann, E.5
-
69
-
-
0012295328
-
Purification of microsomal signal peptidase as a complex
-
Evans EA, Gilmore R, Blobel G, (1986). Purification of microsomal signal peptidase as a complex. Proc Natl Acad Sci USA 83: 581-585.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 581-585
-
-
Evans, E.A.1
Gilmore, R.2
Blobel, G.3
-
70
-
-
20744441520
-
Subunits of the translocon interact with components of the oligosaccharyl transferase complex
-
Chavan M, Yan A, Lennarz WJ, (2005). Subunits of the translocon interact with components of the oligosaccharyl transferase complex. J Biol Chem 280: 22917-22924.
-
(2005)
J Biol Chem
, vol.280
, pp. 22917-22924
-
-
Chavan, M.1
Yan, A.2
Lennarz, W.J.3
-
71
-
-
23044510444
-
Transmembrane helices before, during, and after insertion
-
White SH, von Heijne G, (2005). Transmembrane helices before, during, and after insertion. Curr Opin Struct Biol 15: 378-386.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 378-386
-
-
White, S.H.1
Von Heijne, G.2
-
72
-
-
4944228608
-
Topogenesis of membrane proteins at the endoplasmic reticulum
-
Higy M, Junne T, Spiess M, (2004). Topogenesis of membrane proteins at the endoplasmic reticulum. Biochemistry 43: 12716-12722.
-
(2004)
Biochemistry
, vol.43
, pp. 12716-12722
-
-
Higy, M.1
Junne, T.2
Spiess, M.3
-
73
-
-
0029738872
-
Experimentally determined hydrophobicity scale for proteins at membrane interfaces
-
Wimley WC, White SH, (1996). Experimentally determined hydrophobicity scale for proteins at membrane interfaces. Nat Struct Biol 3: 842-848.
-
(1996)
Nat Struct Biol
, vol.3
, pp. 842-848
-
-
Wimley, W.C.1
White, S.H.2
-
74
-
-
0030249150
-
Threshold hydrophobicity dictates helical conformations of peptides in membrane environments
-
Liu LP, Li SC, Goto NK, Deber CM, (1996). Threshold hydrophobicity dictates helical conformations of peptides in membrane environments. Biopolymers 39: 465-470.
-
(1996)
Biopolymers
, vol.39
, pp. 465-470
-
-
Liu, L.P.1
Li, S.C.2
Goto, N.K.3
Deber, C.M.4
-
75
-
-
79961238544
-
Apolar surface area determines the efficiency of translocon-mediated membrane-protein integration into the endoplasmic reticulum
-
Ojemalm K, Higuchi T, Jiang Y, Langel U, Nilsson I, White SH, Suga H, von Heijne G, (2011). Apolar surface area determines the efficiency of translocon-mediated membrane-protein integration into the endoplasmic reticulum. Proc Natl Acad Sci USA 108: E359-E364.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. E359-E364
-
-
Ojemalm, K.1
Higuchi, T.2
Jiang, Y.3
Langel, U.4
Nilsson, I.5
White, S.H.6
Suga, H.7
Von Heijne, G.8
-
76
-
-
84906320078
-
Why is the biological hydrophobicity scale more accurate than earlier experimental hydrophobicity scales?
-
Peters C, Elofsson A, (2014). Why is the biological hydrophobicity scale more accurate than earlier experimental hydrophobicity scales? Proteins 82: 2190-2198.
-
(2014)
Proteins
, vol.82
, pp. 2190-2198
-
-
Peters, C.1
Elofsson, A.2
-
77
-
-
13444262028
-
Recognition of transmembrane helices by the endoplasmic reticulum translocon
-
Hessa T, Kim H, Bihlmaier K, Lundin C, Boekel J, Andersson H, Nilsson I, White SH, von Heijne G, (2005). Recognition of transmembrane helices by the endoplasmic reticulum translocon. Nature 433: 377-381.
-
(2005)
Nature
, vol.433
, pp. 377-381
-
-
Hessa, T.1
Kim, H.2
Bihlmaier, K.3
Lundin, C.4
Boekel, J.5
Andersson, H.6
Nilsson, I.7
White, S.H.8
Von Heijne, G.9
-
78
-
-
0032509153
-
Breaking the camel's back: Proline-induced turns in a model transmembrane helix
-
Nilsson I, von Heijne G, (1998). Breaking the camel's back: Proline-induced turns in a model transmembrane helix. J Mol Biol 284: 1185-1189.
-
(1998)
J Mol Biol
, vol.284
, pp. 1185-1189
-
-
Nilsson, I.1
Von Heijne, G.2
-
79
-
-
57349168025
-
Molecular code for protein insertion in the endoplasmic reticulum membrane is similar for N(in)-C(out) and N(out)-C(in) transmembrane helices
-
Lundin C, Kim H, Nilsson I, White SH, von Heijne G, (2008). Molecular code for protein insertion in the endoplasmic reticulum membrane is similar for N(in)-C(out) and N(out)-C(in) transmembrane helices. Proc Natl Acad Sci USA 105: 15702-15707.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15702-15707
-
-
Lundin, C.1
Kim, H.2
Nilsson, I.3
White, S.H.4
Von Heijne, G.5
-
80
-
-
84879969808
-
Quantitative analysis of SecYEG-mediated insertion of transmembrane α-helices into the bacterial inner membrane
-
Ojemalm K, Botelho SC, Studle C, von Heijne G, (2013). Quantitative analysis of SecYEG-mediated insertion of transmembrane α-helices into the bacterial inner membrane. J Mol Biol 425: 2813-2822.
-
(2013)
J Mol Biol
, vol.425
, pp. 2813-2822
-
-
Ojemalm, K.1
Botelho, S.C.2
Studle, C.3
Von Heijne, G.4
-
81
-
-
60849083215
-
Analysis of transmembrane helix integration in the endoplasmic reticulum in S. Cerevisiae
-
Hessa T, Reithinger JH, von Heijne G, Kim H, (2009). Analysis of transmembrane helix integration in the endoplasmic reticulum in S. cerevisiae. J Mol Biol 386: 1222-1228.
-
(2009)
J Mol Biol
, vol.386
, pp. 1222-1228
-
-
Hessa, T.1
Reithinger, J.H.2
Von Heijne, G.3
Kim, H.4
-
82
-
-
0035795721
-
Amino acid distributions in integral membrane protein structures
-
Ulmschneider MB, Sansom MS, (2001). Amino acid distributions in integral membrane protein structures. Biochim Biophys Acta 1512: 1-14.
-
(2001)
Biochim Biophys Acta
, vol.1512
, pp. 1-14
-
-
Ulmschneider, M.B.1
Sansom, M.S.2
-
83
-
-
24644490119
-
Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes
-
Nilsson J, Persson B, von Heijne G, (2005). Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes. Proteins 60: 606-616.
-
(2005)
Proteins
, vol.60
, pp. 606-616
-
-
Nilsson, J.1
Persson, B.2
Von Heijne, G.3
-
84
-
-
77249173166
-
Repositioning of transmembrane alpha-helices during membrane protein folding
-
Kauko A, Hedin LE, Thebaud E, Cristobal S, Elofsson A, von Heijne G, (2010). Repositioning of transmembrane alpha-helices during membrane protein folding. J Mol Biol 397: 190-201.
-
(2010)
J Mol Biol
, vol.397
, pp. 190-201
-
-
Kauko, A.1
Hedin, L.E.2
Thebaud, E.3
Cristobal, S.4
Elofsson, A.5
Von Heijne, G.6
-
85
-
-
2342544065
-
Snorkeling preferences foster an amino acid composition bias in transmembrane helices
-
Chamberlain AK, Lee Y, Kim S, Bowie JU, (2004). Snorkeling preferences foster an amino acid composition bias in transmembrane helices. J Mol Biol 339: 471-479.
-
(2004)
J Mol Biol
, vol.339
, pp. 471-479
-
-
Chamberlain, A.K.1
Lee, Y.2
Kim, S.3
Bowie, J.U.4
-
86
-
-
67650869802
-
Insertion of short transmembrane helices by the sec61 translocon
-
Jaud S, Fernandez-Vidal M, Nilsson I, Meindl-Beinker NM, Hubner NC, Tobias DJ, von Heijne G, White SH, (2009). Insertion of short transmembrane helices by the sec61 translocon. Proc Natl Acad Sci USA 106: 11588-11593.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 11588-11593
-
-
Jaud, S.1
Fernandez-Vidal, M.2
Nilsson, I.3
Meindl-Beinker, N.M.4
Hubner, N.C.5
Tobias, D.J.6
Von Heijne, G.7
White, S.H.8
-
87
-
-
0032509124
-
Positively and negatively charged residues have different effects on the position in the membrane of a model transmembrane helix
-
Monne M, Nilsson I, Johansson M, Elmhed N, von Heijne G, (1998). Positively and negatively charged residues have different effects on the position in the membrane of a model transmembrane helix. J Mol Biol 284: 1177-1183.
-
(1998)
J Mol Biol
, vol.284
, pp. 1177-1183
-
-
Monne, M.1
Nilsson, I.2
Johansson, M.3
Elmhed, N.4
Von Heijne, G.5
-
88
-
-
0033587583
-
An aspartate residue at the extracellular boundary of TMII and an arginine residue in TMVII of the gastrin-releasing peptide receptor interact to facilitate heterotrimeric G protein coupling
-
Donohue PJ, Sainz E, Akeson M, Kroog GS, Mantey SA, Battey JF, Jensen RT, Northup JK, (1999). An aspartate residue at the extracellular boundary of TMII and an arginine residue in TMVII of the gastrin-releasing peptide receptor interact to facilitate heterotrimeric G protein coupling. Biochemistry 38: 9366-9372.
-
(1999)
Biochemistry
, vol.38
, pp. 9366-9372
-
-
Donohue, P.J.1
Sainz, E.2
Akeson, M.3
Kroog, G.S.4
Mantey, S.A.5
Battey, J.F.6
Jensen, R.T.7
Northup, J.K.8
-
89
-
-
0026439214
-
Functional interactions between putative intramembrane charged residues in the lactose permease of Escherichia coli. Proc
-
Sahin-Toth M, Dunten RL, Gonzalez A, Kaback HR, (1992). Functional interactions between putative intramembrane charged residues in the lactose permease of Escherichia coli. Proc Natl Acad Sci USA 89: 10547-10551.
-
(1992)
Natl Acad Sci USA
, vol.89
, pp. 10547-10551
-
-
Sahin-Toth, M.1
Dunten, R.L.2
Gonzalez, A.3
Kaback, H.R.4
-
90
-
-
0026529067
-
Different positively charged amino acids have similar effects on the topology of a polytopic transmembrane protein in Escherichia coli
-
Andersson H, Bakker E, von Heijne G, (1992). Different positively charged amino acids have similar effects on the topology of a polytopic transmembrane protein in Escherichia coli. J Biol Chem 267: 1491-1495.
-
(1992)
J Biol Chem
, vol.267
, pp. 1491-1495
-
-
Andersson, H.1
Bakker, E.2
Von Heijne, G.3
-
91
-
-
0025015646
-
Fine-tuning the topology of a polytopic membrane protein: Role of positively and negatively charged amino acids
-
Nilsson I, von Heijne G, (1990). Fine-tuning the topology of a polytopic membrane protein: role of positively and negatively charged amino acids. Cell 62: 1135-1141.
-
(1990)
Cell
, vol.62
, pp. 1135-1141
-
-
Nilsson, I.1
Von Heijne, G.2
-
92
-
-
0032540320
-
The proton motive force, acting on acidic residues, promotes translocation of amino-terminal domains of membrane proteins when the hydrophobicity of the translocation signal is low
-
Delgado-Partin VM, Dalbey RE, (1998). The proton motive force, acting on acidic residues, promotes translocation of amino-terminal domains of membrane proteins when the hydrophobicity of the translocation signal is low. J Biol Chem 273: 9927-9934.
-
(1998)
J Biol Chem
, vol.273
, pp. 9927-9934
-
-
Delgado-Partin, V.M.1
Dalbey, R.E.2
-
93
-
-
0033584852
-
A single negatively charged residue affects the orientation of a membrane protein in the inner membrane of Escherichia coli only when it is located adjacent to a transmembrane domain
-
Rutz C, Rosenthal W, Schulein R, (1999). A single negatively charged residue affects the orientation of a membrane protein in the inner membrane of Escherichia coli only when it is located adjacent to a transmembrane domain. J Biol Chem 274: 33757-33763.
-
(1999)
J Biol Chem
, vol.274
, pp. 33757-33763
-
-
Rutz, C.1
Rosenthal, W.2
Schulein, R.3
-
94
-
-
0032987478
-
Membrane protein folding and stability: Physical principles
-
White SH, Wimley WC, (1999). Membrane protein folding and stability: physical principles. Annu Rev Biophys Biomol Struct 28: 319-365.
-
(1999)
Annu Rev Biophys Biomol Struct
, vol.28
, pp. 319-365
-
-
White, S.H.1
Wimley, W.C.2
-
95
-
-
0034284386
-
How proteins adapt to a membrane-water interface
-
Killian JA, von Heijne G, (2000). How proteins adapt to a membrane-water interface. Trends Biochem Sci 25: 429-434.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 429-434
-
-
Killian, J.A.1
Von Heijne, G.2
-
96
-
-
0033609498
-
The aromatic residues trp and phe have different effects on the positioning of a transmembrane helix in the microsomal membrane
-
Braun P, von Heijne G, (1999). The aromatic residues trp and phe have different effects on the positioning of a transmembrane helix in the microsomal membrane Biochemistry 38: 9778-9782.
-
(1999)
Biochemistry
, vol.38
, pp. 9778-9782
-
-
Braun, P.1
Von Heijne, G.2
-
97
-
-
0034327611
-
Hinges, swivels and switches: The role of prolines in signalling via transmembrane alpha-helices
-
Sansom MS, Weinstein H, (2000). Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices. Trends Pharmacol Sci 21: 445-451.
-
(2000)
Trends Pharmacol Sci
, vol.21
, pp. 445-451
-
-
Sansom, M.S.1
Weinstein, H.2
-
98
-
-
33746361201
-
Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: Application to complete genomes
-
Viklund H, Granseth E, Elofsson A, (2006). Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: application to complete genomes. J Mol Biol 361: 591-603.
-
(2006)
J Mol Biol
, vol.361
, pp. 591-603
-
-
Viklund, H.1
Granseth, E.2
Elofsson, A.3
-
99
-
-
26444611461
-
Transmembrane glycine zippers: Physiological and pathological roles in membrane proteins
-
Kim S, Jeon TJ, Oberai A, Yang D, Schmidt JJ, Bowie JU, (2005). Transmembrane glycine zippers: physiological and pathological roles in membrane proteins. Proc Natl Acad Sci USA 102: 14278-14283.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14278-14283
-
-
Kim, S.1
Jeon, T.J.2
Oberai, A.3
Yang, D.4
Schmidt, J.J.5
Bowie, J.U.6
-
100
-
-
4143085058
-
Folding of helical membrane proteins: The role of polar, GxxxG-like and proline motifs
-
Senes A, Engel DE, DeGrado WF, (2004). Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs. Curr Opin Struct Biol 14: 465-479.
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 465-479
-
-
Senes, A.1
Engel, D.E.2
DeGrado, W.F.3
-
101
-
-
0000651660
-
The distribution of positively charged residues in bacterial inner membrane proteins correlates with the trans-membrane topology
-
Heijne G, (1986). The distribution of positively charged residues in bacterial inner membrane proteins correlates with the trans-membrane topology. EMBO J 5: 3021-3027.
-
(1986)
EMBO J
, vol.5
, pp. 3021-3027
-
-
Heijne, G.1
-
102
-
-
0031954925
-
Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
-
Wallin E, von Heijne G, (1998). Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms. Protein Sci 7: 1029-1038.
-
(1998)
Protein Sci
, vol.7
, pp. 1029-1038
-
-
Wallin, E.1
Von Heijne, G.2
-
103
-
-
41949125627
-
Contribution of positively charged flanking residues to the insertion of transmembrane helices into the endoplasmic reticulum
-
Lerch-Bader M, Lundin C, Kim H, Nilsson I, von Heijne G, (2008). Contribution of positively charged flanking residues to the insertion of transmembrane helices into the endoplasmic reticulum. Proc Natl Acad Sci USA 105: 4127-4132.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 4127-4132
-
-
Lerch-Bader, M.1
Lundin, C.2
Kim, H.3
Nilsson, I.4
Von Heijne, G.5
-
104
-
-
0027263346
-
Positively charged amino acids placed next to a signal sequence block protein translocation more efficiently in Escherichia coli than in mammalian microsomes
-
Johansson M, Nilsson I, von Heijne G, (1993). Positively charged amino acids placed next to a signal sequence block protein translocation more efficiently in Escherichia coli than in mammalian microsomes. Mol Gen Genet 239: 251-256.
-
(1993)
Mol Gen Genet
, vol.239
, pp. 251-256
-
-
Johansson, M.1
Nilsson, I.2
Von Heijne, G.3
-
105
-
-
0031843725
-
The positive inside rule is not determined by the polarity of the delta psi (transmembrane electrical potential)
-
van de Vossenberg JL, Albers SV, van der Does C, Driessen AJ, van Klompenburg W, (1998) The positive inside rule is not determined by the polarity of the delta psi (transmembrane electrical potential). Mol Microbiol 29: 1125-1127.
-
(1998)
Mol Microbiol
, vol.29
, pp. 1125-1127
-
-
Van De Vossenberg, J.L.1
Albers, S.V.2
Van Der Does, C.3
Driessen, A.J.4
Van Klompenburg, W.5
-
106
-
-
9144247030
-
The role of lipids in membrane insertion and translocation of bacterial proteins
-
van Dalen A, de Kruijff B, (2004). The role of lipids in membrane insertion and translocation of bacterial proteins. Biochim Biophys Acta 1694: 97-109.
-
(2004)
Biochim Biophys Acta
, vol.1694
, pp. 97-109
-
-
Van Dalen, A.1
De Kruijff, B.2
-
107
-
-
0025142363
-
Initial steps in protein membrane insertion. Bacteriophage m13 procoat protein binds to the membrane surface by electrostatic interaction
-
Gallusser A, Kuhn A, (1990). Initial steps in protein membrane insertion. Bacteriophage m13 procoat protein binds to the membrane surface by electrostatic interaction. EMBO J 9: 2723-2729.
-
(1990)
EMBO J
, vol.9
, pp. 2723-2729
-
-
Gallusser, A.1
Kuhn, A.2
-
108
-
-
84873100800
-
A retrospective: Use of Escherichia coli as a vehicle to study phospholipid synthesis and function
-
Dowhan W, (2013). A retrospective: use of Escherichia coli as a vehicle to study phospholipid synthesis and function. BBA 1831: 471-494.
-
(2013)
BBA
, vol.1831
, pp. 471-494
-
-
Dowhan, W.1
-
109
-
-
1542313960
-
Sec61p contributes to signal sequence orientation according to the positive-inside rule
-
Goder V, Junne T, Spiess M, (2004). Sec61p contributes to signal sequence orientation according to the positive-inside rule. Mol Biol Cell 15: 1470-1478.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 1470-1478
-
-
Goder, V.1
Junne, T.2
Spiess, M.3
-
110
-
-
36349034451
-
Mutations in the Sec61p channel affecting signal sequence recognition and membrane protein topology
-
Junne T, Schwede T, Goder V, Spiess M, (2007). Mutations in the Sec61p channel affecting signal sequence recognition and membrane protein topology. J Biol Chem 282: 33201-33209.
-
(2007)
J Biol Chem
, vol.282
, pp. 33201-33209
-
-
Junne, T.1
Schwede, T.2
Goder, V.3
Spiess, M.4
-
111
-
-
0025249842
-
Membrane protein folding and oligomerization: The two-stage model
-
Popot JL, Engelman DM, (1990) Membrane protein folding and oligomerization: the two-stage model. Biochemistry 29: 4031-4037.
-
(1990)
Biochemistry
, vol.29
, pp. 4031-4037
-
-
Popot, J.L.1
Engelman, D.M.2
-
112
-
-
28444488355
-
Solving the membrane protein folding problem
-
Bowie JU, (2005). Solving the membrane protein folding problem. Nature 438: 581-589.
-
(2005)
Nature
, vol.438
, pp. 581-589
-
-
Bowie, J.U.1
-
113
-
-
79959979273
-
A flip turn for membrane protein insertion
-
Shao S, Hegde RS, (2011). A flip turn for membrane protein insertion. Cell 146: 13-15.
-
(2011)
Cell
, vol.146
, pp. 13-15
-
-
Shao, S.1
Hegde, R.S.2
-
114
-
-
74649086575
-
Membrane insertion of marginally hydrophobic transmembrane helices depends on sequence context
-
Hedin LE, Ojemalm K, Bernsel A, Hennerdal A, Illergard K, Enquist K, Kauko A, Cristobal S, von Heijne G, Lerch-Bader M, Nilsson I, Elofsson A, (2010). Membrane insertion of marginally hydrophobic transmembrane helices depends on sequence context. J Mol Biol 396: 221-229.
-
(2010)
J Mol Biol
, vol.396
, pp. 221-229
-
-
Hedin, L.E.1
Ojemalm, K.2
Bernsel, A.3
Hennerdal, A.4
Illergard, K.5
Enquist, K.6
Kauko, A.7
Cristobal, S.8
Von Heijne, G.9
Lerch-Bader, M.10
Nilsson, I.11
Elofsson, A.12
-
115
-
-
0032185234
-
Forced transmembrane orientation of hydrophilic polypeptide segments in multispanning membrane proteins
-
Ota K, Sakaguchi M, von Heijne G, Hamasaki N, Mihara K, (1998). Forced transmembrane orientation of hydrophilic polypeptide segments in multispanning membrane proteins. Mol Cell 2: 495-503.
-
(1998)
Mol Cell
, vol.2
, pp. 495-503
-
-
Ota, K.1
Sakaguchi, M.2
Von Heijne, G.3
Hamasaki, N.4
Mihara, K.5
-
116
-
-
27144549973
-
Sequential triage of transmembrane segments by Sec61alpha during biogenesis of a native multispanning membrane protein
-
Sadlish H, Pitonzo D, Johnson AE, Skach WR, (2005). Sequential triage of transmembrane segments by Sec61alpha during biogenesis of a native multispanning membrane protein. Nat Struct Mol Biol 12: 870-878.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 870-878
-
-
Sadlish, H.1
Pitonzo, D.2
Johnson, A.E.3
Skach, W.R.4
-
117
-
-
0029060799
-
Artificial transmembrane segments. Requirements for stop transfer and polypeptide orientation
-
Chen H, Kendall DA, (1995). Artificial transmembrane segments. Requirements for stop transfer and polypeptide orientation. J Biol Chem 270: 14115-14122.
-
(1995)
J Biol Chem
, vol.270
, pp. 14115-14122
-
-
Chen, H.1
Kendall, D.A.2
-
118
-
-
0030919649
-
Multiple determinants direct the orientation of signal-anchor proteins: The topogenic role of the hydrophobic signal domain
-
Wahlberg JM, Spiess M, (1997) Multiple determinants direct the orientation of signal-anchor proteins: the topogenic role of the hydrophobic signal domain. J Cell Biol 137: 555-562.
-
(1997)
J Cell Biol
, vol.137
, pp. 555-562
-
-
Wahlberg, J.M.1
Spiess, M.2
-
119
-
-
0039005869
-
The topogenic contribution of uncharged amino acids on signal sequence orientation in the endoplasmic reticulum
-
Rosch K, Naeher D, Laird V, Goder V, Spiess M, (2000). The topogenic contribution of uncharged amino acids on signal sequence orientation in the endoplasmic reticulum. J Biol Chem 275: 14916-14922.
-
(2000)
J Biol Chem
, vol.275
, pp. 14916-14922
-
-
Rosch, K.1
Naeher, D.2
Laird, V.3
Goder, V.4
Spiess, M.5
-
120
-
-
0042313962
-
Molecular mechanism of signal sequence orientation in the endoplasmic reticulum
-
Goder V, Spiess M, (2003). Molecular mechanism of signal sequence orientation in the endoplasmic reticulum. EMBO J 22: 3645-3653.
-
(2003)
EMBO J
, vol.22
, pp. 3645-3653
-
-
Goder, V.1
Spiess, M.2
-
121
-
-
0024268344
-
Introduction of basic amino acid residues after the signal peptide inhibits protein translocation across the cytoplasmic membrane of Escherichia coli. Relation to the orientation of membrane proteins
-
Yamane K, Mizushima S, (1988). Introduction of basic amino acid residues after the signal peptide inhibits protein translocation across the cytoplasmic membrane of Escherichia coli. Relation to the orientation of membrane proteins. J Biol Chem 263: 19690-19696.
-
(1988)
J Biol Chem
, vol.263
, pp. 19690-19696
-
-
Yamane, K.1
Mizushima, S.2
-
122
-
-
0032502747
-
Refolding of bacteriorhodopsin from expressed polypeptide fragments
-
Marti T, (1998). Refolding of bacteriorhodopsin from expressed polypeptide fragments. J Biol Chem 273: 9312-9322.
-
(1998)
J Biol Chem
, vol.273
, pp. 9312-9322
-
-
Marti, T.1
-
123
-
-
0030838729
-
Reconstitution of functional voltage-gated chloride channels from complementary fragments of CLC-1
-
Schmidt-Rose T, Jentsch TJ, (1997). Reconstitution of functional voltage-gated chloride channels from complementary fragments of CLC-1. J Biol Chem 272: 20515-20521.
-
(1997)
J Biol Chem
, vol.272
, pp. 20515-20521
-
-
Schmidt-Rose, T.1
Jentsch, T.J.2
-
124
-
-
68249144241
-
Similar energetic contributions of packing in the core of membrane and water-soluble proteins
-
Joh NH, Oberai A, Yang D, Whitelegge JP, Bowie JU, (2009) Similar energetic contributions of packing in the core of membrane and water-soluble proteins. J Am Chem Soc 131: 10846-10847.
-
(2009)
J Am Chem Soc
, vol.131
, pp. 10846-10847
-
-
Joh, N.H.1
Oberai, A.2
Yang, D.3
Whitelegge, J.P.4
Bowie, J.U.5
-
125
-
-
70449555146
-
Structural imperatives impose diverse evolutionary constraints on helical membrane proteins
-
Oberai A, Joh NH, Pettit FK, Bowie JU, (2009) Structural imperatives impose diverse evolutionary constraints on helical membrane proteins. Proc Natl Acad Sci USA 106: 17747-17750.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 17747-17750
-
-
Oberai, A.1
Joh, N.H.2
Pettit, F.K.3
Bowie, J.U.4
-
126
-
-
0037019829
-
CH.O hydrogen bonds at protein-protein interfaces
-
Jiang L, Lai L, (2002). CH.O hydrogen bonds at protein-protein interfaces. J Biol Chem 277: 37732-37740.
-
(2002)
J Biol Chem
, vol.277
, pp. 37732-37740
-
-
Jiang, L.1
Lai, L.2
-
127
-
-
0035971221
-
Strength of the calpha H.O hydrogen bond of amino acid residues
-
Scheiner S, Kar T, Gu Y, (2001). Strength of the calpha H.O hydrogen bond of amino acid residues. J Biol Chem 276: 9832-9837.
-
(2001)
J Biol Chem
, vol.276
, pp. 9832-9837
-
-
Scheiner, S.1
Kar, T.2
Gu, Y.3
-
128
-
-
2342449189
-
Experimental measurement of the strength of a C alpha-H.O bond in a lipid bilayer
-
Arbely E, Arkin IT, (2004). Experimental measurement of the strength of a C alpha-H.O bond in a lipid bilayer. J Am Chem Soc 126: 5362-5363.
-
(2004)
J Am Chem Soc
, vol.126
, pp. 5362-5363
-
-
Arbely, E.1
Arkin, I.T.2
-
129
-
-
1542375012
-
A C alpha-H.O hydrogen bond in a membrane protein is not stabilizing
-
Yohannan S, Faham S, Yang D, Grosfeld D, Chamberlain AK, Bowie JU, (2004). A C alpha-H.O hydrogen bond in a membrane protein is not stabilizing. J Am Chem Soc 126: 2284-2285.
-
(2004)
J Am Chem Soc
, vol.126
, pp. 2284-2285
-
-
Yohannan, S.1
Faham, S.2
Yang, D.3
Grosfeld, D.4
Chamberlain, A.K.5
Bowie, J.U.6
-
130
-
-
0035979146
-
The calpha - H.O hydrogen bond: A determinant of stability and specificity in transmembrane helix interactions
-
Senes A, Ubarretxena-Belandia I, Engelman DM, (2001). The calpha-H.O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions. Proc Natl Acad Sci USA 98: 9056-9061.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9056-9061
-
-
Senes, A.1
Ubarretxena-Belandia, I.2
Engelman, D.M.3
-
131
-
-
44049094995
-
Hydrogen-bonding and packing features of membrane proteins: Functional implications
-
Hildebrand PW, Gunther S, Goede A, Forrest L, Frommel C, Preissner R, (2008) Hydrogen-bonding and packing features of membrane proteins: functional implications. Biophys J 94: 1945-1953.
-
(2008)
Biophys J
, vol.94
, pp. 1945-1953
-
-
Hildebrand, P.W.1
Gunther, S.2
Goede, A.3
Forrest, L.4
Frommel, C.5
Preissner, R.6
-
132
-
-
33748602095
-
Molecular mechanisms of aquaporin biogenesis by the endoplasmic reticulum sec61 translocon
-
Pitonzo D, Skach WR, (2006). Molecular mechanisms of aquaporin biogenesis by the endoplasmic reticulum sec61 translocon. Biochim Biophys Acta 1758: 976-988.
-
(2006)
Biochim Biophys Acta
, vol.1758
, pp. 976-988
-
-
Pitonzo, D.1
Skach, W.R.2
-
133
-
-
34249683488
-
Membrane protein structure: Prediction versus reality
-
Elofsson A, von Heijne G, (2007) Membrane protein structure: prediction versus reality. Annu Rev Biochem 76: 125-140.
-
(2007)
Annu Rev Biochem
, vol.76
, pp. 125-140
-
-
Elofsson, A.1
Von Heijne, G.2
-
134
-
-
84901817717
-
Large tilts in transmembrane helices can be induced during tertiary structure formation
-
Virkki M, Boekel C, Illergard K, Peters C, Shu N, Tsirigos KD, Elofsson A, von Heijne G, Nilsson I, (2014). Large tilts in transmembrane helices can be induced during tertiary structure formation. J Mol Biol 426: 2529-2538.
-
(2014)
J Mol Biol
, vol.426
, pp. 2529-2538
-
-
Virkki, M.1
Boekel, C.2
Illergard, K.3
Peters, C.4
Shu, N.5
Tsirigos, K.D.6
Elofsson, A.7
Von Heijne, G.8
Nilsson, I.9
-
135
-
-
78649770531
-
Why are polar residues within the membrane core evolutionary conserved?
-
Illergard K, Kauko A, Elofsson A, (2011). Why are polar residues within the membrane core evolutionary conserved?. Proteins 79: 79-91. -
-
(2011)
Proteins
, vol.79
, pp. 79-91
-
-
Illergard, K.1
Kauko, A.2
Elofsson, A.3
-
136
-
-
84868317374
-
Lipid-dependent generation of dual topology for a membrane protein
-
Bogdanov M, Dowhan W, (2012). Lipid-dependent generation of dual topology for a membrane protein. J Biol Chem 287: 37939-37948.
-
(2012)
J Biol Chem
, vol.287
, pp. 37939-37948
-
-
Bogdanov, M.1
Dowhan, W.2
-
137
-
-
33746644754
-
Membrane proteins shape up: Understanding in vitro folding
-
Booth PJ, Curnow P, (2006). Membrane proteins shape up: understanding in vitro folding. Curr Opin Struct Biol 16: 480-488.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 480-488
-
-
Booth, P.J.1
Curnow, P.2
-
138
-
-
84857641142
-
Folding and stability of membrane transport proteins in vitro
-
Harris NJ, Booth PJ, (2012). Folding and stability of membrane transport proteins in vitro. Biochim Biophys Acta 1818: 1055-1066.
-
(2012)
Biochim Biophys Acta
, vol.1818
, pp. 1055-1066
-
-
Harris, N.J.1
Booth, P.J.2
-
139
-
-
17744395499
-
Biogenesis of CFTR and other polytopic membrane proteins: New roles for the ribosome-translocon complex
-
Sadlish H, Skach WR, (2004). Biogenesis of CFTR and other polytopic membrane proteins: new roles for the ribosome-translocon complex. J Membr Biol 202: 115-126.
-
(2004)
J Membr Biol
, vol.202
, pp. 115-126
-
-
Sadlish, H.1
Skach, W.R.2
-
140
-
-
0042815085
-
Cooperation of transmembrane segments during the integration of a double-spanning protein into the ER membrane
-
Heinrich SU, Rapoport TA, (2003). Cooperation of transmembrane segments during the integration of a double-spanning protein into the ER membrane. EMBO J 22: 3654-3663.
-
(2003)
EMBO J
, vol.22
, pp. 3654-3663
-
-
Heinrich, S.U.1
Rapoport, T.A.2
-
141
-
-
0037039368
-
Integration of Shaker-type K+ channel, kat1, into the endoplasmic reticulum membrane: Synergistic insertion of voltage-sensing segments, S3-s4, and independent insertion of pore-forming segments, S5-P-s6. Proc
-
Sato Y, Sakaguchi M, Goshima S, Nakamura T, Uozumi N, (2002). Integration of Shaker-type K+ channel, kat1, into the endoplasmic reticulum membrane: synergistic insertion of voltage-sensing segments, S3-s4, and independent insertion of pore-forming segments, S5-P-s6. Proc Natl Acad Sci USA 99: 60-65.
-
(2002)
Natl Acad Sci USA
, vol.99
, pp. 60-65
-
-
Sato, Y.1
Sakaguchi, M.2
Goshima, S.3
Nakamura, T.4
Uozumi, N.5
-
142
-
-
44649159957
-
Coils in the membrane core are conserved and functionally important
-
Kauko A, Illergard K, Elofsson A, (2008). Coils in the membrane core are conserved and functionally important. J Mol Biol 380: 170-180.
-
(2008)
J Mol Biol
, vol.380
, pp. 170-180
-
-
Kauko, A.1
Illergard, K.2
Elofsson, A.3
-
143
-
-
34547650465
-
A novel tripartite motif involved in aquaporin topogenesis, monomer folding and tetramerization
-
Buck TM, Wagner J, Grund S, Skach WR, (2007). A novel tripartite motif involved in aquaporin topogenesis, monomer folding and tetramerization. Nat Struct Mol Biol 14: 762-769.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 762-769
-
-
Buck, T.M.1
Wagner, J.2
Grund, S.3
Skach, W.R.4
-
144
-
-
33750498869
-
Asn- and ASP-mediated interactions between transmembrane helices during translocon-mediated membrane protein assembly
-
Meindl-Beinker NM, Lundin C, Nilsson I, White SH, von Heijne G, (2006). Asn- and Asp-mediated interactions between transmembrane helices during translocon-mediated membrane protein assembly. EMBO Rep 7: 1111-1116.
-
(2006)
EMBO Rep
, vol.7
, pp. 1111-1116
-
-
Meindl-Beinker, N.M.1
Lundin, C.2
Nilsson, I.3
White, S.H.4
Von Heijne, G.5
-
145
-
-
34347249218
-
Contribution of hydrophobic and electrostatic interactions to the membrane integration of the shaker K+ channel voltage sensor domain
-
Zhang L, Sato Y, Hessa T, von Heijne G, Lee JK, Kodama I, Sakaguchi M, Uozumi N, (2007). Contribution of hydrophobic and electrostatic interactions to the membrane integration of the shaker K+ channel voltage sensor domain. Proc Natl Acad Sci USA 104: 8263-8268.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 8263-8268
-
-
Zhang, L.1
Sato, Y.2
Hessa, T.3
Von Heijne, G.4
Lee, J.K.5
Kodama, I.6
Sakaguchi, M.7
Uozumi, N.8
-
146
-
-
84857439394
-
Orientational preferences of neighboring helices can drive ER insertion of a marginally hydrophobic transmembrane helix
-
Ojemalm K, Halling KK, Nilsson I, von Heijne G, (2012). Orientational preferences of neighboring helices can drive ER insertion of a marginally hydrophobic transmembrane helix. Mol Cell 45: 529-540.
-
(2012)
Mol Cell
, vol.45
, pp. 529-540
-
-
Ojemalm, K.1
Halling, K.K.2
Nilsson, I.3
Von Heijne, G.4
-
147
-
-
0036661083
-
Aquaporin water channels - From atomic structure to clinical medicine
-
Agre P, King LS, Yasui M, Guggino WB, Ottersen OP, Fujiyoshi Y, Engel A, Nielsen S, (2002). Aquaporin water channels-from atomic structure to clinical medicine. J Physiol (Lond) 542: 3-16.
-
(2002)
J Physiol (Lond)
, vol.542
, pp. 3-16
-
-
Agre, P.1
King, L.S.2
Yasui, M.3
Guggino, W.B.4
Ottersen, O.P.5
Fujiyoshi, Y.6
Engel, A.7
Nielsen, S.8
-
148
-
-
0028318283
-
Biogenesis and transmembrane topology of the chip28 water channel at the endoplasmic reticulum
-
Skach WR, Shi LB, Calayag MC, Frigeri A, Lingappa VR, Verkman AS, (1994). Biogenesis and transmembrane topology of the chip28 water channel at the endoplasmic reticulum. J Cell Biol 125: 803-815.
-
(1994)
J Cell Biol
, vol.125
, pp. 803-815
-
-
Skach, W.R.1
Shi, L.B.2
Calayag, M.C.3
Frigeri, A.4
Lingappa, V.R.5
Verkman, A.S.6
-
149
-
-
0034492193
-
Reorientation of aquaporin-1 topology during maturation in the endoplasmic reticulum
-
Lu Y, Turnbull IR, Bragin A, Carveth K, Verkman AS, Skach WR, (2000). Reorientation of aquaporin-1 topology during maturation in the endoplasmic reticulum. Mol Biol Cell 11: 2973-2985.
-
(2000)
Mol Biol Cell
, vol.11
, pp. 2973-2985
-
-
Lu, Y.1
Turnbull, I.R.2
Bragin, A.3
Carveth, K.4
Verkman, A.S.5
Skach, W.R.6
-
150
-
-
0027976658
-
Membrane topology of aquaporin CHIP. Analysis of functional epitope-scanning mutants by vectorial proteolysis
-
Preston GM, Jung JS, Guggino WB, Agre P, (1994). Membrane topology of aquaporin CHIP. Analysis of functional epitope-scanning mutants by vectorial proteolysis. J Biol Chem 269: 1668-1673.
-
(1994)
J Biol Chem
, vol.269
, pp. 1668-1673
-
-
Preston, G.M.1
Jung, J.S.2
Guggino, W.B.3
Agre, P.4
-
151
-
-
12844283314
-
Differential stability of biogenesis intermediates reveals a common pathway for aquaporin-1 topological maturation
-
Buck TM, Skach WR, (2005). Differential stability of biogenesis intermediates reveals a common pathway for aquaporin-1 topological maturation. J Biol Chem 280: 261-269.
-
(2005)
J Biol Chem
, vol.280
, pp. 261-269
-
-
Buck, T.M.1
Skach, W.R.2
-
152
-
-
0034602391
-
Identification of sequence determinants that direct different intracellular folding pathways for aquaporin-1 and aquaporin-4
-
Foster W, Helm A, Turnbull I, Gulati H, Yang B, Verkman AS, Skach WR, (2000). Identification of sequence determinants that direct different intracellular folding pathways for aquaporin-1 and aquaporin-4. J Biol Chem 275: 34157-34165.
-
(2000)
J Biol Chem
, vol.275
, pp. 34157-34165
-
-
Foster, W.1
Helm, A.2
Turnbull, I.3
Gulati, H.4
Yang, B.5
Verkman, A.S.6
Skach, W.R.7
-
153
-
-
84899550455
-
Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources
-
Li GW, Burkhardt D, Gross C, Weissman JS, (2014). Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources. Cell 157: 624-635.
-
(2014)
Cell
, vol.157
, pp. 624-635
-
-
Li, G.W.1
Burkhardt, D.2
Gross, C.3
Weissman, J.S.4
-
154
-
-
0028802746
-
A hierarchy of ATP-consuming processes in mammalian cells
-
Buttgereit FM, Brand D, (1995). A hierarchy of ATP-consuming processes in mammalian cells. Biochem J 312: 163-167.
-
(1995)
Biochem J
, vol.312
, pp. 163-167
-
-
Buttgereit, F.M.1
Brand, D.2
-
155
-
-
0029963423
-
Sequence requirements for membrane assembly of polytopic membrane proteins: Molecular dissection of the membrane insertion process and topogenesis of the human mdr3 P-glycoprotein
-
Zhang JT, (1996). Sequence requirements for membrane assembly of polytopic membrane proteins: molecular dissection of the membrane insertion process and topogenesis of the human mdr3 P-glycoprotein. Mol Biol Cell 7: 1709-1721.
-
(1996)
Mol Biol Cell
, vol.7
, pp. 1709-1721
-
-
Zhang, J.T.1
-
156
-
-
35748932922
-
Topology inversion of SecG is essential for cytosolic SecA-dependent stimulation of protein translocation
-
Sugai R, Takemae K, Tokuda H, Nishiyama K, (2007). Topology inversion of SecG is essential for cytosolic SecA-dependent stimulation of protein translocation. J Biol Chem 282: 29540-29548.
-
(2007)
J Biol Chem
, vol.282
, pp. 29540-29548
-
-
Sugai, R.1
Takemae, K.2
Tokuda, H.3
Nishiyama, K.4
-
157
-
-
84904179187
-
Folding of aquaporin 1: Multiple evidence that helix 3 can shift out of the membrane core
-
Virkki MT, Agrawal N, Edsbacker E, Cristobal S, Elofsson A, Kauko A, (2014). Folding of aquaporin 1: multiple evidence that helix 3 can shift out of the membrane core. Protein Sci 23: 981-992.
-
(2014)
Protein Sci
, vol.23
, pp. 981-992
-
-
Virkki, M.T.1
Agrawal, N.2
Edsbacker, E.3
Cristobal, S.4
Elofsson, A.5
Kauko, A.6
-
158
-
-
79955650131
-
A look at arginine in membranes
-
Hristova K, Wimley WC, (2011). A look at arginine in membranes. J Membr Biol 239: 49-56.
-
(2011)
J Membr Biol
, vol.239
, pp. 49-56
-
-
Hristova, K.1
Wimley, W.C.2
-
159
-
-
34247633528
-
On the thermodynamic stability of a charged arginine side chain in a transmembrane helix
-
Dorairaj S, Allen TW, (2007). On the thermodynamic stability of a charged arginine side chain in a transmembrane helix. Proc Natl Acad Sci USA 104: 4943-4948.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 4943-4948
-
-
Dorairaj, S.1
Allen, T.W.2
-
160
-
-
66249130020
-
A unified hydrophobicity scale for multispan membrane proteins
-
Koehler J, Woetzel N, Staritzbichler R, Sanders CR, Meiler J, (2009). A unified hydrophobicity scale for multispan membrane proteins. Proteins 76: 13-29.
-
(2009)
Proteins
, vol.76
, pp. 13-29
-
-
Koehler, J.1
Woetzel, N.2
Staritzbichler, R.3
Sanders, C.R.4
Meiler, J.5
-
161
-
-
20044389842
-
Membrane insertion of a potassium-channel voltage sensor
-
Hessa T, White SH, von Heijne G, (2005). Membrane insertion of a potassium-channel voltage sensor. Science 307: 1427.
-
(2005)
Science
, vol.307
, pp. 1427
-
-
Hessa, T.1
White, S.H.2
Von Heijne, G.3
-
162
-
-
79954723199
-
On the role of anionic lipids in charged protein interactions with membranes
-
Vorobyov I, Allen TW, (2011). On the role of anionic lipids in charged protein interactions with membranes. Biochim Biophys Acta 1808: 1673-1683.
-
(2011)
Biochim Biophys Acta
, vol.1808
, pp. 1673-1683
-
-
Vorobyov, I.1
Allen, T.W.2
-
163
-
-
0026501551
-
Functions of signal and signal-anchor sequences are determined by the balance between the hydrophobic segment and the N-terminal charge
-
Sakaguchi M, Tomiyoshi R, Kuroiwa T, Mihara K, Omura T, (1992). Functions of signal and signal-anchor sequences are determined by the balance between the hydrophobic segment and the N-terminal charge. Proc Natl Acad Sci USA 89: 16-19.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 16-19
-
-
Sakaguchi, M.1
Tomiyoshi, R.2
Kuroiwa, T.3
Mihara, K.4
Omura, T.5
-
164
-
-
77953625243
-
MPRAP: An accessibility predictor for a-helical transmembrane proteins that performs well inside and outside the membrane
-
Illergard K, Callegari S, Elofsson A, (2010). MPRAP: an accessibility predictor for a-helical transmembrane proteins that performs well inside and outside the membrane. BMC Bioinform 11: 333.
-
(2010)
BMC Bioinform
, vol.11
, pp. 333
-
-
Illergard, K.1
Callegari, S.2
Elofsson, A.3
-
165
-
-
0037180396
-
The tenth membrane region of band 3 is initially exposed to the luminal side of the endoplasmic reticulum and then integrated into a partially folded band 3 intermediate
-
Kanki T, Sakaguchi M, Kitamura A, Sato T, Mihara K, Hamasaki N, (2002). The tenth membrane region of band 3 is initially exposed to the luminal side of the endoplasmic reticulum and then integrated into a partially folded band 3 intermediate. Biochemistry 41: 13973-13981.
-
(2002)
Biochemistry
, vol.41
, pp. 13973-13981
-
-
Kanki, T.1
Sakaguchi, M.2
Kitamura, A.3
Sato, T.4
Mihara, K.5
Hamasaki, N.6
-
166
-
-
4744344168
-
Topogenesis of nhe1: Direct insertion of the membrane loop and sequestration of cryptic glycosylation and processing sites just after tm9
-
Sato Y, Ariyoshi N, Mihara K, Sakaguchi M, (2004). Topogenesis of nhe1: direct insertion of the membrane loop and sequestration of cryptic glycosylation and processing sites just after tm9. Biochem Biophys Res Commun 324: 281-287.
-
(2004)
Biochem Biophys Res Commun
, vol.324
, pp. 281-287
-
-
Sato, Y.1
Ariyoshi, N.2
Mihara, K.3
Sakaguchi, M.4
-
167
-
-
84872016140
-
A gating motif in the translocation channel sets the hydrophobicity threshold for signal sequence function
-
Trueman SF, Mandon EC, Gilmore R, (2012). A gating motif in the translocation channel sets the hydrophobicity threshold for signal sequence function. J Cell Biol 199: 907-918.
-
(2012)
J Cell Biol
, vol.199
, pp. 907-918
-
-
Trueman, S.F.1
Mandon, E.C.2
Gilmore, R.3
-
168
-
-
77952378779
-
The hydrophobic core of the sec61 translocon defines the hydrophobicity threshold for membrane integration
-
Junne T, Kocik L, Spiess M, (2010). The hydrophobic core of the sec61 translocon defines the hydrophobicity threshold for membrane integration. Mol Biol Cell 21: 1662-1670.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 1662-1670
-
-
Junne, T.1
Kocik, L.2
Spiess, M.3
-
169
-
-
84901715964
-
Structural and functional profiling of the lateral gate of the sec61 translocon
-
Reithinger JH, Yim C, Kim S, Lee H, Kim H, (2014). Structural and functional profiling of the lateral gate of the sec61 translocon. J Biol Chem 289: 15845-15855.
-
(2014)
J Biol Chem
, vol.289
, pp. 15845-15855
-
-
Reithinger, J.H.1
Yim, C.2
Kim, S.3
Lee, H.4
Kim, H.5
-
170
-
-
0030611388
-
The aqueous pore through the translocon has a diameter of 40-60 a during cotranslational protein translocation at the ER membrane
-
Hamman BD, Chen JC, Johnson EE, Johnson AE, (1997). The aqueous pore through the translocon has a diameter of 40-60 a during cotranslational protein translocation at the ER membrane. Cell 89: 535-544.
-
(1997)
Cell
, vol.89
, pp. 535-544
-
-
Hamman, B.D.1
Chen, J.C.2
Johnson, E.E.3
Johnson, A.E.4
-
171
-
-
79956359999
-
Probing the SecYEG translocation pore size with preproteins conjugated with sizable rigid spherical molecules
-
Bonardi F, Halza E, Walko M, Du Plessis F, Nouwen N, Feringa BL, Driessen AJ, (2011). Probing the SecYEG translocation pore size with preproteins conjugated with sizable rigid spherical molecules. Proc Natl Acad Sci USA 108: 7775-7780.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 7775-7780
-
-
Bonardi, F.1
Halza, E.2
Walko, M.3
Du Plessis, F.4
Nouwen, N.5
Feringa, B.L.6
Driessen, A.J.7
-
172
-
-
54049111011
-
Structure of a complex of the ATPase SecA and the protein-translocation channel
-
Zimmer J, Nam Y, Rapoport TA, (2008). Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 455: 936-943.
-
(2008)
Nature
, vol.455
, pp. 936-943
-
-
Zimmer, J.1
Nam, Y.2
Rapoport, T.A.3
-
173
-
-
42449130051
-
Specific transmembrane segments are selectively delayed at the ER translocon during opsin biogenesis
-
Ismail N, Crawshaw SG, Cross BC, Haagsma AC, High S, (2008). Specific transmembrane segments are selectively delayed at the ER translocon during opsin biogenesis. Biochem J 411: 495-506.
-
(2008)
Biochem J
, vol.411
, pp. 495-506
-
-
Ismail, N.1
Crawshaw, S.G.2
Cross, B.C.3
Haagsma, A.C.4
High, S.5
-
174
-
-
27844444793
-
Structure of the E. Coli protein-conducting channel bound to a translating ribosome
-
Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks CL, Ban N, Frank J, (2005). Structure of the E. coli protein-conducting channel bound to a translating ribosome. Nature 438: 318-324.
-
(2005)
Nature
, vol.438
, pp. 318-324
-
-
Mitra, K.1
Schaffitzel, C.2
Shaikh, T.3
Tama, F.4
Jenni, S.5
Brooks, C.L.6
Ban, N.7
Frank, J.8
-
175
-
-
84890856922
-
Transmembrane segments form tertiary hairpins in the folding vestibule of the ribosome
-
Tu L, Khanna P, Deutsch C, (2014). Transmembrane segments form tertiary hairpins in the folding vestibule of the ribosome. J Mol Biol 426: 185-198.
-
(2014)
J Mol Biol
, vol.426
, pp. 185-198
-
-
Tu, L.1
Khanna, P.2
Deutsch, C.3
-
176
-
-
38049058405
-
Two translocating hydrophilic segments of a nascent chain span the ER membrane during multispanning protein topogenesis
-
Kida Y, Morimoto F, Sakaguchi M, (2007). Two translocating hydrophilic segments of a nascent chain span the ER membrane during multispanning protein topogenesis. J Cell Biol 179: 1441-1452.
-
(2007)
J Cell Biol
, vol.179
, pp. 1441-1452
-
-
Kida, Y.1
Morimoto, F.2
Sakaguchi, M.3
-
177
-
-
61949084073
-
Sequence-specific retention and regulated integration of a nascent membrane protein by the endoplasmic reticulum sec61 translocon
-
Pitonzo D, Yang Z, Matsumura Y, Johnson AE, Skach WR, (2009). Sequence-specific retention and regulated integration of a nascent membrane protein by the endoplasmic reticulum sec61 translocon. Mol Biol Cell 20: 685-698.
-
(2009)
Mol Biol Cell
, vol.20
, pp. 685-698
-
-
Pitonzo, D.1
Yang, Z.2
Matsumura, Y.3
Johnson, A.E.4
Skach, W.R.5
-
178
-
-
33646191829
-
Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes
-
Tian P, Andricioaei I, (2006). Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes. Biophys J 90: 2718-2730.
-
(2006)
Biophys J
, vol.90
, pp. 2718-2730
-
-
Tian, P.1
Andricioaei, I.2
-
180
-
-
0024448087
-
Lipid traffic in animal cells
-
van Meer G, (1989). Lipid traffic in animal cells. Annu Rev Cell Biol 5: 247-275.
-
(1989)
Annu Rev Cell Biol
, vol.5
, pp. 247-275
-
-
Van Meer, G.1
|