Hydrophobic mismatch between helices and lipid bilayers

Biophysical Journal

Volumn 84, Issue 1, 2003, Pages 379-385

  Weiss, Thomas M ^a   Van der Wel, Patrick C A ^b   Killian, J Antoinette ^c   Koeppe II, Roger E ^b   Huang, Huey W ^a  

^a RICE UNIVERSITY   (United States)

^b UNIVERSITY OF ARKANSAS   (United States)

^c UTRECHT UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

1,2 DILAUROYLGLYCERO 3 PHOSPHOCHOLINE; 1,2 TRIDECANOYLGLYCERO 3 PHOSPHOCHOLINE; ALANINE; CHOLINE DERIVATIVE; DIMYRISTOYLPHOSPHATIDYLCHOLINE; LEUCINE; PEPTIDE; TRYPTOPHAN; UNCLASSIFIED DRUG; WALP PEPTIDE;

AMINO ACID SEQUENCE; ARTICLE; HYDROPHOBICITY; LIPID BILAYER; X RAY DIFFRACTION;

EID: 12244255728     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)74858-9     Document Type: Article

References (36)

1. Alberts, B., D. Brays, J. Lewis, M. Raff, K. Roberts, and J. D. Watson. 1994. Molecular Biology of the Cell, 3rd Ed. Garland Publishing, New York. 487.
2. Asher, S. A., and P. S. Pershan. 1979. Alignment and defect structures in oriented phosphatidylcholine multilayers. Biophys. J. 27:393-422.
3. Blaurock, A. E. 1971. Structure of the nerve myelin membrane: Proof of the low resolution profile. J. Mol. Biol. 56:35-52.
4. Chen, F. Y., W. C. Hung, and H. W. Huang. 1997. Critical swelling of phospholipid bilayers. Phys. Rev. Lett. 79:4026-4029.
5. 2H-NMR and ESR study using designed transmembrane α-helical peptides and gramicidin A. Biochemistry. 37:9333-9345.
6. De Planque, M. R. R., J. A. Kruijtzer, R. M. Liskamp, D. Marsh, D. V. Greathouse, R. E. Koeppe II, B. de Kruijff, and J. A. Killian. 1999. Different membrane anchoring positions of tryptophan and lysine in synthetic transmembrane alpha-helical peptides. J. Biol. Chem. 274:20839-20846.
7. Elliott, J. R., D. Needham, J. P. Dilger, and D. A. Haydon. 1983. The effects of bilayer thickness and tension on gramicidin single-channel lifetime. Biochim. Biophys. Acta. 735:95-103.
8. Goulian, M., O. N. Mesquita, D. K. Fygenson, E. Moses, C. Nielsen, O. S. Andersen, and A. Libchaber. 1998. Gramicidin channel kinetics under tension. Biophys. J. 74:328-337.
9. Greathouse, D. V., R. L. Goforth, T. Crawford, P. C. A. van der Wel, and J. A. Killian. 2001. Optimized aminolysis conditions for cleavage of N-protected hydrophobic peptides from solid-phase resins. J. Pept. Res. 57:519-527.
10. Harroun, T. A., W. T. Heller, T. M. Weiss, L. Yang, and H. W. Huang. 1999a. Experimental evidence for hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin. Biophys. J. 76:937-945.
11. Harroun, T. A., W. T. Heller, T. M. Weiss, L. Yang, and H. W. Huang. 1999b. Theoretical analysis of hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin. Biophys. J. 76:3176-3185.
12. He, K., S. J. Ludtke, Y. Wu, and H. W. Huang. 1993. X-ray scattering with momentum transfer in the plane of membrane: Application to gramicidin organization. Biophys. J. 64:157-162.
13. He, K., S. J. Ludtke, D. L. Worcester, and H. W. Huang. 1996. Neutron scattering in the plane of membranes: Structure of alamethicin pores. Biophys. J. 70:2659-2666.
14. Heller, W. T., A. J. Waring, R. I. Lehrer, and H. W. Huang. 1998. Multiple states of β-sheet peptide protegrin in lipid bilayers. Biochemistry. 37:17331-17338.
15. Heller, W. T., A. J. Waring, R. I. Lehrer, T. A. Harroun, T. M. Weiss, L. Yang, and H. W. Huang. 2000. Membrane thinning effect of the β-sheet antimicrobial protegrin. Biochemistry. 39:139-145.
16. Huang, H. W. 1986. Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime. Biophys. J. 50:1061-1070.
17. Huang, H. W., and G. A. Olah. 1987. Uniformly oriented gramicidin channels embedded in thick monodomain lecithin multilayers. Biophys. J. 51:989-992.
18. Huang, H. W. 2000. Action of antimicrobial peptides: Two-state model. Biochemistry. 39:8347-8352.
19. Killian, J. A., I. Salemink, M. R. R. de Planque, G. Lindblom, R. E. Koeppe II, and D. V. Greathouse. 1996. Induction of nonbilayer structures in diacylphosphatidylcholine model membranes by transmembrane α-helical peptides: Importance of hydrophobic mismatch and proposed role of tryptophans. Biochemistry. 35:1037-1045.
20. Ludtke, S. J., K. He, Y. Wu, and H. W. Huang. 1994. Cooperative membrane insertion of magainin correlated with its cytolytic activity. Biochim. Biophys. Acta. 1190:181-184.
21. Ludtke, S., K. He, and H. W. Huang. 1995. Membrane thinning caused by magainin 2. Biochemistry. 34:16764-16769.
22. McIntosh, T. J., and S. A. Simon. 1986. Area per molecule and distribution of water in fully hydrated dilauroylphosphatidylethanolamine bilayers. Biochemistry. 25:4948-4952.
23. Nagle, J. F., R. Zhang, S. Tristram-Nagle, W. Sun, H. I. Petrache, and R. M. Suter. 1996. X-ray structure determination of fully hydrated La phase dipalmitoylphosphatidylcholine bilayers. Biophys. J. 70:1419-1431.
24. Nagle, J. F., and S. Tristram-Nagle. 2000. Structure of lipid bilayers. Biochim. Biophys. Acta. 1469:159-195.
25. O'Connell, A. M., R. E. Koeppe II, and O. S. Andersen. 1990. Kinetics of gramicidin channel formation in lipid bilayers: Transmembrane monomer association. Science. 250:1256-1259.
26. Olah, G. A., and H. W. Huang. 1988. Circular dichroism of oriented α-helices. I. Proof of the exciton theory. J. Chem. Phys. 89:2531-2538.
27. Olah, G. A., H. W. Huang, W. Liu, and Y. Wu. 1991. Location of ion binding sites in the gramicidin channel by x-ray diffraction. J. Mol. Biol. 218:847-858.
28. Powers, L., and P. S. Pershan. 1977. Monodomain samples of dipalmitoyl phosphatidylcholine with varying concentrations of water and other ingredients. Biophys. J. 20:137-152.
29. Schiffer, M., C. H. Chang, and F. J. Stevens. 1992. The functions of tryptophan residues in membrane proteins. Protein Engr. 5:213-214.
30. Van der Wel, P. C. A., T. Pott, W. Morein, D. V. Greathouse, R. E. Koeppe II, and J. A. Killian. 2000. Tryptophan-anchored transmembrane peptides promote formation of nonlamellar phases in phosphatidylethanolamine model membranes in a mismatch-dependent manner. Biochemistry. 39:3124-3133.
31. 2H NMR. Biophys. J. 83:1479-1488.
32. Velluz, L., M. Legrand, and M. Grosjean. 1965. Optical Circular Dichroism. Academic Press, New York. 57-72.
33. Weiss, T. M., L. Yang, L. Ding, A. J. Waring, R. I. Lehrer, and H. W. Huang. 2002. Two states of cyclic antimicrobial peptide RTD-1 in lipid bilayers. Biochemistry. 41:10070-10076.
34. Wu, Y., H. W. Huang, and G. A. Olah. 1990. Method of oriented circular dichroism. Biophys. J. 57:797-806.
35. Wu, Y., K. He, S. J. Ludtke, and H. W. Huang. 1995. X-ray diffraction study of lipid bilayer membrane interacting with amphiphilic helical peptides: Diphytanoyl phosphatidylcholine with alamethicin at low concentrations. Biophys. J. 68:2361-2369.
36. Yang, L., T. A. Harroun, T. M. Weiss, L. Ding, and H. W. Huang. 2001. Barrel-stave model or toroidal model? A case study on melittin pores. Biophys. J. 81:1475-1485.