-
1
-
-
0033568606
-
The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor
-
S.E. Ades, L.E. Connolly, B.M. Alba, and C.A. Gross The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor Genes Dev. 13 1999 2449 2461
-
(1999)
Genes Dev.
, vol.13
, pp. 2449-2461
-
-
Ades, S.E.1
Connolly, L.E.2
Alba, B.M.3
Gross, C.A.4
-
2
-
-
0029989855
-
FtsH (HflB) is an ATP-dependent protease selectively acting on SecY and some other membrane proteins
-
Y. Akiyama, A. Kihara, H. Tokuda, and K. Ito FtsH (HflB) is an ATP-dependent protease selectively acting on SecY and some other membrane proteins J. Biol. Chem. 271 1996 31196 31201
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 31196-31201
-
-
Akiyama, Y.1
Kihara, A.2
Tokuda, H.3
Ito, K.4
-
4
-
-
0025297285
-
Codon preferences in free-living microorganisms
-
S.G. Andersson, and C.G. Kurland Codon preferences in free-living microorganisms Microbiol. Rev. 54 1990 198 210
-
(1990)
Microbiol. Rev.
, vol.54
, pp. 198-210
-
-
Andersson, S.G.1
Kurland, C.G.2
-
5
-
-
36749099486
-
Variability and robustness in biomolecular systems
-
N. Barkai, and B.Z. Shilo Variability and robustness in biomolecular systems Mol. Cell 28 2007 755 760
-
(2007)
Mol. Cell
, vol.28
, pp. 755-760
-
-
Barkai, N.1
Shilo, B.Z.2
-
6
-
-
0037457896
-
Robustness and the cycle of phosphorylation and dephosphorylation in a two-component regulatory system
-
E. Batchelor, and M. Goulian Robustness and the cycle of phosphorylation and dephosphorylation in a two-component regulatory system Proc. Natl. Acad. Sci. USA 100 2003 691 696
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 691-696
-
-
Batchelor, E.1
Goulian, M.2
-
7
-
-
0020509796
-
Localization of the target site for translational regulation of the L11 operon and direct evidence for translational coupling in Escherichia coli
-
G. Baughman, and M. Nomura Localization of the target site for translational regulation of the L11 operon and direct evidence for translational coupling in Escherichia coli Cell 34 1983 979 988
-
(1983)
Cell
, vol.34
, pp. 979-988
-
-
Baughman, G.1
Nomura, M.2
-
8
-
-
0020591175
-
Synthesis and assembly of spectrin during avian erythropoiesis: Stoichiometric assembly but unequal synthesis of alpha and beta spectrin
-
I. Blikstad, W.J. Nelson, R.T. Moon, and E. Lazarides Synthesis and assembly of spectrin during avian erythropoiesis: stoichiometric assembly but unequal synthesis of alpha and beta spectrin Cell 32 1983 1081 1091
-
(1983)
Cell
, vol.32
, pp. 1081-1091
-
-
Blikstad, I.1
Nelson, W.J.2
Moon, R.T.3
Lazarides, E.4
-
9
-
-
84871523350
-
A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress
-
O. Brandman, J. Stewart-Ornstein, D. Wong, A. Larson, C.C. Williams, G.W. Li, S. Zhou, D. King, P.S. Shen, and J. Weibezahn et al. A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress Cell 151 2012 1042 1054
-
(2012)
Cell
, vol.151
, pp. 1042-1054
-
-
Brandman, O.1
Stewart-Ornstein, J.2
Wong, D.3
Larson, A.4
Williams, C.C.5
Li, G.W.6
Zhou, S.7
King, D.8
Shen, P.S.9
Weibezahn, J.10
-
10
-
-
84856625798
-
High-resolution view of the yeast meiotic program revealed by ribosome profiling
-
G.A. Brar, M. Yassour, N. Friedman, A. Regev, N.T. Ingolia, and J.S. Weissman High-resolution view of the yeast meiotic program revealed by ribosome profiling Science 335 2012 552 557
-
(2012)
Science
, vol.335
, pp. 552-557
-
-
Brar, G.A.1
Yassour, M.2
Friedman, N.3
Regev, A.4
Ingolia, N.T.5
Weissman, J.S.6
-
11
-
-
0020457179
-
Differential polypeptide synthesis of the proton-translocating ATPase of Escherichia coli
-
W.S. Brusilow, D.J. Klionsky, and R.D. Simoni Differential polypeptide synthesis of the proton-translocating ATPase of Escherichia coli J. Bacteriol. 151 1982 1363 1371
-
(1982)
J. Bacteriol.
, vol.151
, pp. 1363-1371
-
-
Brusilow, W.S.1
Klionsky, D.J.2
Simoni, R.D.3
-
12
-
-
0028802746
-
A hierarchy of ATP-consuming processes in mammalian cells
-
F. Buttgereit, and M.D. Brand A hierarchy of ATP-consuming processes in mammalian cells Biochem. J. 312 1995 163 167
-
(1995)
Biochem. J.
, vol.312
, pp. 163-167
-
-
Buttgereit, F.1
Brand, M.D.2
-
13
-
-
52949098296
-
Frequency-modulated nuclear localization bursts coordinate gene regulation
-
L. Cai, C.K. Dalal, and M.B. Elowitz Frequency-modulated nuclear localization bursts coordinate gene regulation Nature 455 2008 485 490
-
(2008)
Nature
, vol.455
, pp. 485-490
-
-
Cai, L.1
Dalal, C.K.2
Elowitz, M.B.3
-
14
-
-
23144432213
-
Optimality and evolutionary tuning of the expression level of a protein
-
E. Dekel, and U. Alon Optimality and evolutionary tuning of the expression level of a protein Nature 436 2005 588 592
-
(2005)
Nature
, vol.436
, pp. 588-592
-
-
Dekel, E.1
Alon, U.2
-
15
-
-
0016264276
-
In vivo stability, maturation and relative differential synthesis rates of individual ribosomal proteins in Escherichia coli B/r
-
P.P. Dennis In vivo stability, maturation and relative differential synthesis rates of individual ribosomal proteins in Escherichia coli B/r J. Mol. Biol. 88 1974 25 41
-
(1974)
J. Mol. Biol.
, vol.88
, pp. 25-41
-
-
Dennis, P.P.1
-
16
-
-
0028907619
-
Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction
-
H. Dong, L. Nilsson, and C.G. Kurland Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction J. Bacteriol. 177 1995 1497 1504
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1497-1504
-
-
Dong, H.1
Nilsson, L.2
Kurland, C.G.3
-
17
-
-
34249932435
-
Probing transcription factor dynamics at the single-molecule level in a living cell
-
J. Elf, G.W. Li, and X.S. Xie Probing transcription factor dynamics at the single-molecule level in a living cell Science 316 2007 1191 1194
-
(2007)
Science
, vol.316
, pp. 1191-1194
-
-
Elf, J.1
Li, G.W.2
Xie, X.S.3
-
19
-
-
34347332311
-
A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information
-
A.M. Feist, C.S. Henry, J.L. Reed, M. Krummenacker, A.R. Joyce, P.D. Karp, L.J. Broadbelt, V. Hatzimanikatis, and B.O. Palsson A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information Mol. Syst. Biol. 3 2007 121
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 121
-
-
Feist, A.M.1
Henry, C.S.2
Reed, J.L.3
Krummenacker, M.4
Joyce, A.R.5
Karp, P.D.6
Broadbelt, L.J.7
Hatzimanikatis, V.8
Palsson, B.O.9
-
21
-
-
84872241785
-
Bacterial persistence and toxin-antitoxin loci
-
K. Gerdes, and E. Maisonneuve Bacterial persistence and toxin-antitoxin loci Annu. Rev. Microbiol. 66 2012 103 123
-
(2012)
Annu. Rev. Microbiol.
, vol.66
, pp. 103-123
-
-
Gerdes, K.1
Maisonneuve, E.2
-
22
-
-
0023322682
-
Sigma 32 synthesis can regulate the synthesis of heat shock proteins in Escherichia coli
-
A.D. Grossman, D.B. Straus, W.A. Walter, and C.A. Gross Sigma 32 synthesis can regulate the synthesis of heat shock proteins in Escherichia coli Genes Dev. 1 1987 179 184
-
(1987)
Genes Dev.
, vol.1
, pp. 179-184
-
-
Grossman, A.D.1
Straus, D.B.2
Walter, W.A.3
Gross, C.A.4
-
23
-
-
84862624197
-
The lac repressor displays facilitated diffusion in living cells
-
P. Hammar, P. Leroy, A. Mahmutovic, E.G. Marklund, O.G. Berg, and J. Elf The lac repressor displays facilitated diffusion in living cells Science 336 2012 1595 1598
-
(2012)
Science
, vol.336
, pp. 1595-1598
-
-
Hammar, P.1
Leroy, P.2
Mahmutovic, A.3
Marklund, E.G.4
Berg, O.G.5
Elf, J.6
-
24
-
-
78650718305
-
Robust control of nitrogen assimilation by a bifunctional enzyme in E coli
-
Y. Hart, D. Madar, J. Yuan, A. Bren, A.E. Mayo, J.D. Rabinowitz, and U. Alon Robust control of nitrogen assimilation by a bifunctional enzyme in E coli Mol. Cell 41 2011 117 127
-
(2011)
Mol. Cell
, vol.41
, pp. 117-127
-
-
Hart, Y.1
Madar, D.2
Yuan, J.3
Bren, A.4
Mayo, A.E.5
Rabinowitz, J.D.6
Alon, U.7
-
25
-
-
84891791249
-
PortEco: A resource for exploring bacterial biology through high-throughput data and analysis tools
-
J.C. Hu, G. Sherlock, D.A. Siegele, S.A. Aleksander, C.A. Ball, J. Demeter, S. Gouni, T.A. Holland, P.D. Karp, and J.E. Lewis et al. PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools Nucleic Acids Res. 42 Database issue 2014 D677 D684
-
(2014)
Nucleic Acids Res.
, vol.42
, Issue.DATABASE ISSUE
-
-
Hu, J.C.1
Sherlock, G.2
Siegele, D.A.3
Aleksander, S.A.4
Ball, C.A.5
Demeter, J.6
Gouni, S.7
Holland, T.A.8
Karp, P.D.9
Lewis, J.E.10
-
26
-
-
62549134121
-
Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
-
N.T. Ingolia, S. Ghaemmaghami, J.R. Newman, and J.S. Weissman Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling Science 324 2009 218 223
-
(2009)
Science
, vol.324
, pp. 218-223
-
-
Ingolia, N.T.1
Ghaemmaghami, S.2
Newman, J.R.3
Weissman, J.S.4
-
27
-
-
81055155799
-
Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes
-
N.T. Ingolia, L.F. Lareau, and J.S. Weissman Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes Cell 147 2011 789 802
-
(2011)
Cell
, vol.147
, pp. 789-802
-
-
Ingolia, N.T.1
Lareau, L.F.2
Weissman, J.S.3
-
28
-
-
84864453787
-
The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments
-
N.T. Ingolia, G.A. Brar, S. Rouskin, A.M. McGeachy, and J.S. Weissman The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments Nat. Protoc. 7 2012 1534 1550
-
(2012)
Nat. Protoc.
, vol.7
, pp. 1534-1550
-
-
Ingolia, N.T.1
Brar, G.A.2
Rouskin, S.3
McGeachy, A.M.4
Weissman, J.S.5
-
29
-
-
0018856008
-
The relative rates of protein synthesis and degradation in a growing culture of Escherichia coli
-
K.L. Larrabee, J.O. Phillips, G.J. Williams, and A.R. Larrabee The relative rates of protein synthesis and degradation in a growing culture of Escherichia coli J. Biol. Chem. 255 1980 4125 4130
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 4125-4130
-
-
Larrabee, K.L.1
Phillips, J.O.2
Williams, G.J.3
Larrabee, A.R.4
-
30
-
-
0023808927
-
Unequal synthesis and differential degradation of alpha and beta spectrin during murine erythroid differentiation
-
M.E. Lehnert, and H.F. Lodish Unequal synthesis and differential degradation of alpha and beta spectrin during murine erythroid differentiation J. Cell Biol. 107 1988 413 426
-
(1988)
J. Cell Biol.
, vol.107
, pp. 413-426
-
-
Lehnert, M.E.1
Lodish, H.F.2
-
31
-
-
0017950371
-
Transient rates of synthesis of individual polypeptides in E coli following temperature shifts
-
P.G. Lemaux, S.L. Herendeen, P.L. Bloch, and F.C. Neidhardt Transient rates of synthesis of individual polypeptides in E coli following temperature shifts Cell 13 1978 427 434
-
(1978)
Cell
, vol.13
, pp. 427-434
-
-
Lemaux, P.G.1
Herendeen, S.L.2
Bloch, P.L.3
Neidhardt, F.C.4
-
32
-
-
79960630264
-
Central dogma at the single-molecule level in living cells
-
G.W. Li, and X.S. Xie Central dogma at the single-molecule level in living cells Nature 475 2011 308 315
-
(2011)
Nature
, vol.475
, pp. 308-315
-
-
Li, G.W.1
Xie, X.S.2
-
33
-
-
63849284078
-
Effects of macromolecular crowding and DNA looping on gene regulation kinetics
-
G.W. Li, O.G. Berg, and J. Elf Effects of macromolecular crowding and DNA looping on gene regulation kinetics Nat. Phys. 5 2009 294 297
-
(2009)
Nat. Phys.
, vol.5
, pp. 294-297
-
-
Li, G.W.1
Berg, O.G.2
Elf, J.3
-
34
-
-
84860231100
-
The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria
-
G.W. Li, E. Oh, and J.S. Weissman The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria Nature 484 2012 538 541
-
(2012)
Nature
, vol.484
, pp. 538-541
-
-
Li, G.W.1
Oh, E.2
Weissman, J.S.3
-
35
-
-
0025051883
-
Translational control of prokaryotic gene expression
-
J.E. McCarthy, and C. Gualerzi Translational control of prokaryotic gene expression Trends Genet. 6 1990 78 85
-
(1990)
Trends Genet.
, vol.6
, pp. 78-85
-
-
McCarthy, J.E.1
Gualerzi, C.2
-
37
-
-
0021155247
-
Regulation of the synthesis of ribosomes and ribosomal components
-
M. Nomura, R. Gourse, and G. Baughman Regulation of the synthesis of ribosomes and ribosomal components Annu. Rev. Biochem. 53 1984 75 117
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 75-117
-
-
Nomura, M.1
Gourse, R.2
Baughman, G.3
-
38
-
-
83255164895
-
Selective ribosome profiling reveals the cotranslational chaperone action of trigger factor in vivo
-
E. Oh, A.H. Becker, A. Sandikci, D. Huber, R. Chaba, F. Gloge, R.J. Nichols, A. Typas, C.A. Gross, and G. Kramer et al. Selective ribosome profiling reveals the cotranslational chaperone action of trigger factor in vivo Cell 147 2011 1295 1308
-
(2011)
Cell
, vol.147
, pp. 1295-1308
-
-
Oh, E.1
Becker, A.H.2
Sandikci, A.3
Huber, D.4
Chaba, R.5
Gloge, F.6
Nichols, R.J.7
Typas, A.8
Gross, C.A.9
Kramer, G.10
-
39
-
-
84871596612
-
Aneuploidy causes proteotoxic stress in yeast
-
A.B. Oromendia, S.E. Dodgson, and A. Amon Aneuploidy causes proteotoxic stress in yeast Genes Dev. 26 2012 2696 2708
-
(2012)
Genes Dev.
, vol.26
, pp. 2696-2708
-
-
Oromendia, A.B.1
Dodgson, S.E.2
Amon, A.3
-
40
-
-
0038157152
-
Dosage sensitivity and the evolution of gene families in yeast
-
B. Papp, C. Pál, and L.D. Hurst Dosage sensitivity and the evolution of gene families in yeast Nature 424 2003 194 197
-
(2003)
Nature
, vol.424
, pp. 194-197
-
-
Papp, B.1
Pál, C.2
Hurst, L.D.3
-
41
-
-
0025063933
-
Escherichia coli ribosomal protein L10 is rapidly degraded when synthesized in excess of ribosomal protein L7/L12
-
C. Petersen Escherichia coli ribosomal protein L10 is rapidly degraded when synthesized in excess of ribosomal protein L7/L12 J. Bacteriol. 172 1990 431 436
-
(1990)
J. Bacteriol.
, vol.172
, pp. 431-436
-
-
Petersen, C.1
-
42
-
-
9544253891
-
Genome-scale models of microbial cells: Evaluating the consequences of constraints
-
N.D. Price, J.L. Reed, and B.O. Palsson Genome-scale models of microbial cells: evaluating the consequences of constraints Nat. Rev. Microbiol. 2 2004 886 897
-
(2004)
Nat. Rev. Microbiol.
, vol.2
, pp. 886-897
-
-
Price, N.D.1
Reed, J.L.2
Palsson, B.O.3
-
43
-
-
84884141974
-
Differential translation tunes uneven production of operon-encoded proteins
-
T.E. Quax, Y.I. Wolf, J.J. Koehorst, O. Wurtzel, R. van der Oost, W. Ran, F. Blombach, K.S. Makarova, S.J. Brouns, and A.C. Forster et al. Differential translation tunes uneven production of operon-encoded proteins Cell Rep. 4 2013 938 944
-
(2013)
Cell Rep.
, vol.4
, pp. 938-944
-
-
Quax, T.E.1
Wolf, Y.I.2
Koehorst, J.J.3
Wurtzel, O.4
Van Der Oost, R.5
Ran, W.6
Blombach, F.7
Makarova, K.S.8
Brouns, S.J.9
Forster, A.C.10
-
44
-
-
84875490160
-
Conformation-specific labeling of BamA and suppressor analysis suggest a cyclic mechanism for β-barrel assembly in Escherichia coli
-
N.W. Rigel, D.P. Ricci, and T.J. Silhavy Conformation-specific labeling of BamA and suppressor analysis suggest a cyclic mechanism for β-barrel assembly in Escherichia coli Proc. Natl. Acad. Sci. USA 110 2013 5151 5156
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 5151-5156
-
-
Rigel, N.W.1
Ricci, D.P.2
Silhavy, T.J.3
-
45
-
-
0028926047
-
Energetics of bacterial growth: Balance of anabolic and catabolic reactions
-
J.B. Russell, and G.M. Cook Energetics of bacterial growth: balance of anabolic and catabolic reactions Microbiol. Rev. 59 1995 48 62
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 48-62
-
-
Russell, J.B.1
Cook, G.M.2
-
46
-
-
70349964350
-
Automated design of synthetic ribosome binding sites to control protein expression
-
H.M. Salis, E.A. Mirsky, and C.A. Voigt Automated design of synthetic ribosome binding sites to control protein expression Nat. Biotechnol. 27 2009 946 950
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 946-950
-
-
Salis, H.M.1
Mirsky, E.A.2
Voigt, C.A.3
-
47
-
-
0017635932
-
Design of molecular control mechanisms and the demand for gene expression
-
M.A. Savageau Design of molecular control mechanisms and the demand for gene expression Proc. Natl. Acad. Sci. USA 74 1977 5647 5651
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5647-5651
-
-
Savageau, M.A.1
-
49
-
-
84860487758
-
Multidimensional optimality of microbial metabolism
-
R. Schuetz, N. Zamboni, M. Zampieri, M. Heinemann, and U. Sauer Multidimensional optimality of microbial metabolism Science 336 2012 601 604
-
(2012)
Science
, vol.336
, pp. 601-604
-
-
Schuetz, R.1
Zamboni, N.2
Zampieri, M.3
Heinemann, M.4
Sauer, U.5
-
50
-
-
0026609662
-
Differential proteolytic sensitivity of yeast fatty acid synthetase subunits alpha and beta contributing to a balanced ratio of both fatty acid synthetase components
-
H.J. Schüller, B. Förtsch, B. Rautenstrauss, D.H. Wolf, and E. Schweizer Differential proteolytic sensitivity of yeast fatty acid synthetase subunits alpha and beta contributing to a balanced ratio of both fatty acid synthetase components Eur. J. Biochem. 203 1992 607 614
-
(1992)
Eur. J. Biochem.
, vol.203
, pp. 607-614
-
-
Schüller, H.J.1
Förtsch, B.2
Rautenstrauss, B.3
Wolf, D.H.4
Schweizer, E.5
-
51
-
-
59449085150
-
Global analysis of cellular protein translation by pulsed SILAC
-
B. Schwanhäusser, M. Gossen, G. Dittmar, and M. Selbach Global analysis of cellular protein translation by pulsed SILAC Proteomics 9 2009 205 209
-
(2009)
Proteomics
, vol.9
, pp. 205-209
-
-
Schwanhäusser, B.1
Gossen, M.2
Dittmar, G.3
Selbach, M.4
-
52
-
-
78449268845
-
Interdependence of cell growth and gene expression: Origins and consequences
-
M. Scott, C.W. Gunderson, E.M. Mateescu, Z. Zhang, and T. Hwa Interdependence of cell growth and gene expression: origins and consequences Science 330 2010 1099 1102
-
(2010)
Science
, vol.330
, pp. 1099-1102
-
-
Scott, M.1
Gunderson, C.W.2
Mateescu, E.M.3
Zhang, Z.4
Hwa, T.5
-
53
-
-
49949117302
-
Widespread changes in protein synthesis induced by microRNAs
-
M. Selbach, B. Schwanhäusser, N. Thierfelder, Z. Fang, R. Khanin, and N. Rajewsky Widespread changes in protein synthesis induced by microRNAs Nature 455 2008 58 63
-
(2008)
Nature
, vol.455
, pp. 58-63
-
-
Selbach, M.1
Schwanhäusser, B.2
Thierfelder, N.3
Fang, Z.4
Khanin, R.5
Rajewsky, N.6
-
54
-
-
0014019613
-
Synthesis of excess light chains of gamma globulin by rabbit lymph node cells
-
A.L. Shapiro, M.D. Scharff, J.V. Maizel, and J.W. Uhr Synthesis of excess light chains of gamma globulin by rabbit lymph node cells Nature 211 1966 243 245
-
(1966)
Nature
, vol.211
, pp. 243-245
-
-
Shapiro, A.L.1
Scharff, M.D.2
Maizel, J.V.3
Uhr, J.W.4
-
55
-
-
84878195272
-
Control of protein quality and stoichiometries by N-terminal acetylation and the N-end rule pathway
-
A. Shemorry, C.S. Hwang, and A. Varshavsky Control of protein quality and stoichiometries by N-terminal acetylation and the N-end rule pathway Mol. Cell 50 2013 540 551
-
(2013)
Mol. Cell
, vol.50
, pp. 540-551
-
-
Shemorry, A.1
Hwang, C.S.2
Varshavsky, A.3
-
59
-
-
84869806462
-
Decoding human cytomegalovirus
-
N. Stern-Ginossar, B. Weisburd, A. Michalski, V.T. Le, M.Y. Hein, S.X. Huang, M. Ma, B. Shen, S.B. Qian, and H. Hengel et al. Decoding human cytomegalovirus Science 338 2012 1088 1093
-
(2012)
Science
, vol.338
, pp. 1088-1093
-
-
Stern-Ginossar, N.1
Weisburd, B.2
Michalski, A.3
Le, V.T.4
Hein, M.Y.5
Huang, S.X.6
Ma, M.7
Shen, B.8
Qian, S.B.9
Hengel, H.10
-
60
-
-
8544264562
-
Efficient attenuation of stochasticity in gene expression through post-transcriptional control
-
P.S. Swain Efficient attenuation of stochasticity in gene expression through post-transcriptional control J. Mol. Biol. 344 2004 965 976
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 965-976
-
-
Swain, P.S.1
-
61
-
-
49849103726
-
Aneuploidy: Cells losing their balance
-
E.M. Torres, B.R. Williams, and A. Amon Aneuploidy: cells losing their balance Genetics 179 2008 737 746
-
(2008)
Genetics
, vol.179
, pp. 737-746
-
-
Torres, E.M.1
Williams, B.R.2
Amon, A.3
-
62
-
-
77958487260
-
Cellular strategies for controlling protein aggregation
-
J. Tyedmers, A. Mogk, and B. Bukau Cellular strategies for controlling protein aggregation Nat. Rev. Mol. Cell Biol. 11 2010 777 788
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, pp. 777-788
-
-
Tyedmers, J.1
Mogk, A.2
Bukau, B.3
-
63
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
G. von Dassow, E. Meir, E.M. Munro, and G.M. Odell The segment polarity network is a robust developmental module Nature 406 2000 188 192
-
(2000)
Nature
, vol.406
, pp. 188-192
-
-
Von Dassow, G.1
Meir, E.2
Munro, E.M.3
Odell, G.M.4
-
64
-
-
34347235771
-
From "simple" DNA-protein interactions to the macromolecular machines of gene expression
-
P.H. von Hippel From "simple" DNA-protein interactions to the macromolecular machines of gene expression Annu. Rev. Biophys. Biomol. Struct. 36 2007 79 105
-
(2007)
Annu. Rev. Biophys. Biomol. Struct.
, vol.36
, pp. 79-105
-
-
Von Hippel, P.H.1
-
65
-
-
0019867850
-
Diffusion-driven mechanisms of protein translocation on nucleic acids. 3 the Escherichia coli lac repressor - Operator interaction: Kinetic measurements and conclusions
-
R.B. Winter, O.G. Berg, and P.H. von Hippel Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor - operator interaction: kinetic measurements and conclusions Biochemistry 20 1981 6961 6977
-
(1981)
Biochemistry
, vol.20
, pp. 6961-6977
-
-
Winter, R.B.1
Berg, O.G.2
Von Hippel, P.H.3
-
67
-
-
84881663369
-
Coordination of bacterial proteome with metabolism by cyclic AMP signalling
-
C. You, H. Okano, S. Hui, Z. Zhang, M. Kim, C.W. Gunderson, Y.P. Wang, P. Lenz, D. Yan, and T. Hwa Coordination of bacterial proteome with metabolism by cyclic AMP signalling Nature 500 2013 301 306
-
(2013)
Nature
, vol.500
, pp. 301-306
-
-
You, C.1
Okano, H.2
Hui, S.3
Zhang, Z.4
Kim, M.5
Gunderson, C.W.6
Wang, Y.P.7
Lenz, P.8
Yan, D.9
Hwa, T.10
-
68
-
-
84865542140
-
Comparison and applications of label-free absolute proteome quantification methods on Escherichia coli
-
L. Arike, K. Valgepea, L. Peil, R. Nahku, K. Adamberg, and R. Vilu Comparison and applications of label-free absolute proteome quantification methods on Escherichia coli J. Proteomics 75 2012 5437 5448
-
(2012)
J. Proteomics
, vol.75
, pp. 5437-5448
-
-
Arike, L.1
Valgepea, K.2
Peil, L.3
Nahku, R.4
Adamberg, K.5
Vilu, R.6
-
69
-
-
77349101808
-
Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli
-
A. Boysen, J. Møller-Jensen, B. Kallipolitis, P. Valentin-Hansen, and M. Overgaard Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli J. Biol. Chem. 285 2010 10690 10702
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 10690-10702
-
-
Boysen, A.1
Møller-Jensen, J.2
Kallipolitis, B.3
Valentin-Hansen, P.4
Overgaard, M.5
-
70
-
-
0000640710
-
Modulation of chemical composition and other parameters of the cell by growth rate
-
F.C. Neidhardt, American Society Microbiology Washington, DC
-
H. Bremer, and P.P. Dennis Modulation of chemical composition and other parameters of the cell by growth rate F.C. Neidhardt, Escherichia coli and Salmonella: Cellular and Molecular Biology 1996 American Society Microbiology Washington, DC 1553 1569
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 1553-1569
-
-
Bremer, H.1
Dennis, P.P.2
-
71
-
-
0001409179
-
Quantitative analysis of pathways of methionine metabolism and their regulation in lemna
-
J. Giovanelli, S.H. Mudd, and A.H. Datko Quantitative analysis of pathways of methionine metabolism and their regulation in lemna Plant Physiol. 78 1985 555 560
-
(1985)
Plant Physiol.
, vol.78
, pp. 555-560
-
-
Giovanelli, J.1
Mudd, S.H.2
Datko, A.H.3
-
72
-
-
44449162195
-
Absolute SILAC for accurate quantitation of proteins in complex mixtures down to the attomole level
-
S. Hanke, H. Besir, D. Oesterhelt, and M. Mann Absolute SILAC for accurate quantitation of proteins in complex mixtures down to the attomole level J. Proteome Res. 7 2008 1118 1130
-
(2008)
J. Proteome Res.
, vol.7
, pp. 1118-1130
-
-
Hanke, S.1
Besir, H.2
Oesterhelt, D.3
Mann, M.4
-
73
-
-
0018191514
-
Enzymatic synthesis and rapid translocation of phosphatidylcholine by two methyltransferases in erythrocyte membranes
-
F. Hirata, and J. Axelrod Enzymatic synthesis and rapid translocation of phosphatidylcholine by two methyltransferases in erythrocyte membranes Proc. Natl. Acad. Sci. USA 75 1978 2348 2352
-
(1978)
Proc. Natl. Acad. Sci. USA
, vol.75
, pp. 2348-2352
-
-
Hirata, F.1
Axelrod, J.2
-
74
-
-
42049108914
-
Protein abundance profiling of the Escherichia coli cytosol
-
Y. Ishihama, T. Schmidt, J. Rappsilber, M. Mann, F.U. Hartl, M.J. Kerner, and D. Frishman Protein abundance profiling of the Escherichia coli cytosol BMC Genomics 9 2008 102
-
(2008)
BMC Genomics
, vol.9
, pp. 102
-
-
Ishihama, Y.1
Schmidt, T.2
Rappsilber, J.3
Mann, M.4
Hartl, F.U.5
Kerner, M.J.6
Frishman, D.7
-
75
-
-
84876556918
-
EcoCyc: Fusing model organism databases with systems biology
-
I.M. Keseler, A. Mackie, M. Peralta-Gil, A. Santos-Zavaleta, S. Gama-Castro, C. Bonavides-Martínez, C. Fulcher, A.M. Huerta, A. Kothari, and M. Krummenacker et al. EcoCyc: fusing model organism databases with systems biology Nucleic Acids Res. 41 Database issue 2013 D605 D612
-
(2013)
Nucleic Acids Res.
, vol.41
, Issue.DATABASE ISSUE
-
-
Keseler, I.M.1
Mackie, A.2
Peralta-Gil, M.3
Santos-Zavaleta, A.4
Gama-Castro, S.5
Bonavides-Martínez, C.6
Fulcher, C.7
Huerta, A.M.8
Kothari, A.9
Krummenacker, M.10
-
76
-
-
33846165487
-
Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
-
P. Lu, C. Vogel, R. Wang, X. Yao, and E.M. Marcotte Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation Nat. Biotechnol. 25 2007 117 124
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 117-124
-
-
Lu, P.1
Vogel, C.2
Wang, R.3
Yao, X.4
Marcotte, E.M.5
-
77
-
-
34249722165
-
Lipid composition of membranes of Escherichia coli by liquid chromatography/tandem mass spectrometry using negative electrospray ionization
-
D. Oursel, C. Loutelier-Bourhis, N. Orange, S. Chevalier, V. Norris, and C.M. Lange Lipid composition of membranes of Escherichia coli by liquid chromatography/tandem mass spectrometry using negative electrospray ionization Rapid Commun. Mass Spectrom. 21 2007 1721 1728
-
(2007)
Rapid Commun. Mass Spectrom.
, vol.21
, pp. 1721-1728
-
-
Oursel, D.1
Loutelier-Bourhis, C.2
Orange, N.3
Chevalier, S.4
Norris, V.5
Lange, C.M.6
-
78
-
-
68749094119
-
Full dynamic range proteome analysis of S cerevisiae by targeted proteomics
-
P. Picotti, B. Bodenmiller, L.N. Mueller, B. Domon, and R. Aebersold Full dynamic range proteome analysis of S cerevisiae by targeted proteomics Cell 138 2009 795 806
-
(2009)
Cell
, vol.138
, pp. 795-806
-
-
Picotti, P.1
Bodenmiller, B.2
Mueller, L.N.3
Domon, B.4
Aebersold, R.5
-
79
-
-
84874687019
-
Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
-
L.S. Qi, M.H. Larson, L.A. Gilbert, J.A. Doudna, J.S. Weissman, A.P. Arkin, and W.A. Lim Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression Cell 152 2013 1173 1183
-
(2013)
Cell
, vol.152
, pp. 1173-1183
-
-
Qi, L.S.1
Larson, M.H.2
Gilbert, L.A.3
Doudna, J.A.4
Weissman, J.S.5
Arkin, A.P.6
Lim, W.A.7
-
81
-
-
84869010693
-
RNAsnap™: A rapid, quantitative and inexpensive, method for isolating total RNA from bacteria
-
M.B. Stead, A. Agrawal, K.E. Bowden, R. Nasir, B.K. Mohanty, R.B. Meagher, and S.R. Kushner RNAsnap™: a rapid, quantitative and inexpensive, method for isolating total RNA from bacteria Nucleic Acids Res. 40 2012 e156
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 156
-
-
Stead, M.B.1
Agrawal, A.2
Bowden, K.E.3
Nasir, R.4
Mohanty, B.K.5
Meagher, R.B.6
Kushner, S.R.7
-
82
-
-
77955102352
-
Quantifying E coli proteome and transcriptome with single-molecule sensitivity in single cells
-
Y. Taniguchi, P.J. Choi, G.W. Li, H. Chen, M. Babu, J. Hearn, A. Emili, and X.S. Xie Quantifying E coli proteome and transcriptome with single-molecule sensitivity in single cells Science 329 2010 533 538
-
(2010)
Science
, vol.329
, pp. 533-538
-
-
Taniguchi, Y.1
Choi, P.J.2
Li, G.W.3
Chen, H.4
Babu, M.5
Hearn, J.6
Emili, A.7
Xie, X.S.8
-
83
-
-
0002331280
-
The future of data analysis
-
J.W. Tukey The future of data analysis Ann. Math. Statist. 33 1962 1 324
-
(1962)
Ann. Math. Statist.
, vol.33
, pp. 1-324
-
-
Tukey, J.W.1
|