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Volumn 6, Issue 6, 2014, Pages 1393-1407

Rapid evolution of piRNA pathway in the Teleost fish: Implication for an adaptation to transposon diversity

Author keywords

Evolution; Positive selection; Reproduction; Teleost fish

Indexed keywords

FISH PROTEIN; SMALL INTERFERING RNA; TRANSPOSON;

EID: 84902969673     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evu105     Document Type: Article
Times cited : (47)

References (75)
  • 1
    • 0037162885 scopus 로고    scopus 로고
    • Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes
    • Aparicio S, et al. 2002. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297: 1301-1310.
    • (2002) Science , vol.297 , pp. 1301-1310
    • Aparicio, S.1
  • 2
    • 33745402414 scopus 로고    scopus 로고
    • A novel class of small RNAs bind to MILI protein in mouse testes
    • Aravin A, et al. 2006. A novel class of small RNAs bind to MILI protein in mouse testes. Nature 442: 203-207.
    • (2006) Nature , vol.442 , pp. 203-207
    • Aravin, A.1
  • 3
    • 52049098967 scopus 로고    scopus 로고
    • A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice
    • Aravin AA, et al. 2008. A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice. Mol Cell. 31: 785-799.
    • (2008) Mol Cell , vol.31 , pp. 785-799
    • Aravin, A.A.1
  • 4
    • 34248160438 scopus 로고    scopus 로고
    • Developmentally regulated piRNA clusters implicateMILI in transposon control
    • Aravin AA, Sachidanandam R, Girard A, Fejes-Toth K, Hannon GJ. 2007. Developmentally regulated piRNA clusters implicateMILI in transposon control. Science 316: 744-747.
    • (2007) Science , vol.316 , pp. 744-747
    • Aravin, A.A.1    Sachidanandam, R.2    Girard, A.3    Fejes-Toth, K.4    Hannon, G.J.5
  • 5
    • 84855882097 scopus 로고    scopus 로고
    • Zisupton - A novel superfamily of DNA transposable elements recently active in fish
    • Bohne A, et al. 2012. Zisupton - a novel superfamily of DNA transposable elements recently active in fish. Mol Biol Evol. 29: 631-645.
    • (2012) Mol Biol Evol , vol.29 , pp. 631-645
    • Bohne, A.1
  • 6
    • 33947720638 scopus 로고    scopus 로고
    • MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline
    • Carmell MA, et al. 2007. MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline. Dev Cell. 12: 503-514.
    • (2007) Dev Cell , vol.12 , pp. 503-514
    • Carmell, M.A.1
  • 7
    • 80052826076 scopus 로고    scopus 로고
    • Molecular evolution under increasing transposable element burden in Drosophila: A speed limit on the evolutionary arms race
    • Castillo DM, Mell JC, Box KS, Blumenstiel JP. 2011. Molecular evolution under increasing transposable element burden in Drosophila: a speed limit on the evolutionary arms race. BMC Evol Biol. 11: 258.
    • (2011) BMC Evol Biol , vol.11 , pp. 258
    • Castillo, D.M.1    Mell, J.C.2    Box, K.S.3    Blumenstiel, J.P.4
  • 8
    • 73949084329 scopus 로고    scopus 로고
    • Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi
    • Chen C, et al. 2009. Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi. Proc Natl Acad Sci U S A. 106: 20336-20341.
    • (2009) Proc Natl Acad Sci U S A. , vol.106 , pp. 20336-20341
    • Chen, C.1
  • 9
    • 77953516038 scopus 로고    scopus 로고
    • A phylogenomic perspective on the new era of ichthyology
    • Chen WJ, Mayden RL. 2010. A phylogenomic perspective on the new era of ichthyology. Bioscience 60: 421-432.
    • (2010) Bioscience , vol.60 , pp. 421-432
    • Chen, W.J.1    Mayden, R.L.2
  • 10
    • 0346058028 scopus 로고    scopus 로고
    • The rice field eel as a model system for vertebrate sexual development
    • Cheng H, Guo Y, Yu Q, Zhou R. 2003. The rice field eel as a model system for vertebrate sexual development. Cytogenet Genome Res. 101: 274-277.
    • (2003) Cytogenet Genome Res , vol.101 , pp. 274-277
    • Cheng, H.1    Guo, Y.2    Yu, Q.3    Zhou, R.4
  • 11
    • 0042121237 scopus 로고    scopus 로고
    • Multiple sequence alignment with the Clustal series of programs
    • Chenna R, et al. 2003. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31: 3497-3500.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3497-3500
    • Chenna, R.1
  • 12
    • 33750482567 scopus 로고    scopus 로고
    • Tdrd1/Mtr-1, a tudor-related gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice
    • Chuma S, et al. 2006. Tdrd1/Mtr-1, a tudor-related gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice. Proc Natl Acad Sci U S A. 103: 15894-15899.
    • (2006) Proc Natl Acad Sci U S A. , vol.103 , pp. 15894-15899
    • Chuma, S.1
  • 14
    • 4344572683 scopus 로고    scopus 로고
    • Teleost fish genomes contain a diverse array of L1 retrotransposon lineages that exhibit a low copy number and high rate of turnover
    • Duvernell DD, Pryor SR, Adams SM. 2004. Teleost fish genomes contain a diverse array of L1 retrotransposon lineages that exhibit a low copy number and high rate of turnover. J Mol Evol. 59: 298-308.
    • (2004) J Mol Evol , vol.59 , pp. 298-308
    • Duvernell, D.D.1    Pryor, S.R.2    Adams, S.M.3
  • 15
    • 0036889395 scopus 로고    scopus 로고
    • Fruit flies and humans respond differently to retrotransposons
    • Eickbush TH, Furano AV. 2002. Fruit flies and humans respond differently to retrotransposons. Curr Opin Genet Dev. 12: 669-674.
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 669-674
    • Eickbush, T.H.1    Furano, A.V.2
  • 16
    • 84892865285 scopus 로고    scopus 로고
    • Variable expression levels detected in the Drosophila effectors of piRNA biogenesis
    • Fablet M, Akkouche A, Braman V, Vieira C. 2014. Variable expression levels detected in the Drosophila effectors of piRNA biogenesis. Gene 537: 149-153.
    • (2014) Gene , vol.537 , pp. 149-153
    • Fablet, M.1    Akkouche, A.2    Braman, V.3    Vieira, C.4
  • 17
    • 77955409741 scopus 로고    scopus 로고
    • MOV10L1 is necessary for protection of spermatocytes against retrotransposons by Piwi-interacting RNAs
    • Frost RJ, et al. 2010. MOV10L1 is necessary for protection of spermatocytes against retrotransposons by Piwi-interacting RNAs. Proc Natl Acad Sci U S A. 107: 11847-11852.
    • (2010) Proc Natl Acad Sci U S A. , vol.107 , pp. 11847-11852
    • Frost, R.J.1
  • 18
    • 0348048755 scopus 로고    scopus 로고
    • L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish
    • Furano AV, Duvernell DD, Boissinot S. 2004. L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish. Trends Genet. 20: 9-14.
    • (2004) Trends Genet , vol.20 , pp. 9-14
    • Furano, A.V.1    Duvernell, D.D.2    Boissinot, S.3
  • 19
    • 33745336617 scopus 로고    scopus 로고
    • A germlinespecific class of small RNAs binds mammalian Piwi proteins
    • Girard A, Sachidanandam R, Hannon GJ, Carmell MA. 2006. A germlinespecific class of small RNAs binds mammalian Piwi proteins. Nature 442: 199-202.
    • (2006) Nature , vol.442 , pp. 199-202
    • Girard, A.1    Sachidanandam, R.2    Hannon, G.J.3    Carmell, M.A.4
  • 20
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 21
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum- likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon S, et al. 2010. New algorithms and methods to estimate maximum- likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 59: 307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1
  • 22
    • 54349089563 scopus 로고    scopus 로고
    • Zili is required for germ cell differentiation and meiosis in zebrafish
    • Houwing S, Berezikov E, Ketting RF. 2008. Zili is required for germ cell differentiation and meiosis in zebrafish. EMBO J. 27: 2702-2711.
    • (2008) EMBO J. , vol.27 , pp. 2702-2711
    • Houwing, S.1    Berezikov, E.2    Ketting, R.F.3
  • 23
    • 34047154356 scopus 로고    scopus 로고
    • A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish
    • Houwing S, et al. 2007. A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish. Cell 129: 69-82.
    • (2007) Cell , vol.129 , pp. 69-82
    • Houwing, S.1
  • 25
    • 79952509006 scopus 로고    scopus 로고
    • PiRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrialsurface lipid signaling
    • Huang H, Gao Q, et al. 2011. piRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrialsurface lipid signaling. Dev Cell. 20: 376-387.
    • (2011) Dev Cell , vol.20 , pp. 376-387
    • Huang, H.1    Gao, Q.2
  • 26
    • 80053583080 scopus 로고    scopus 로고
    • Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish
    • Huang HY, Houwing S, et al. 2011. Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish. EMBO J. 30: 3298-3308.
    • (2011) EMBO J. , vol.30 , pp. 3298-3308
    • Huang, H.Y.1    Houwing, S.2
  • 27
    • 84868589615 scopus 로고    scopus 로고
    • Biology of PIWI-interacting RNAs: New insights into biogenesis and function inside and outside of germlines
    • Ishizu H, Siomi H, Siomi MC. 2012. Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlines. Genes Dev. 26: 2361-2373.
    • (2012) Genes Dev , vol.26 , pp. 2361-2373
    • Ishizu, H.1    Siomi, H.2    Siomi, M.C.3
  • 28
    • 0034284437 scopus 로고    scopus 로고
    • Repbase update: A database and an electronic journal of repetitive elements
    • Jurka J. 2000. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet. 16: 418-420.
    • (2000) Trends Genet , vol.16 , pp. 418-420
    • Jurka, J.1
  • 29
    • 17144417381 scopus 로고    scopus 로고
    • Argonaute protein PIWI controls mobilization of retrotransposons in the Drosophila male germline
    • Kalmykova AI, Klenov MS, Gvozdev VA. 2005. Argonaute protein PIWI controls mobilization of retrotransposons in the Drosophila male germline. Nucleic Acids Res. 33: 2052-2059.
    • (2005) Nucleic Acids Res , vol.33 , pp. 2052-2059
    • Kalmykova, A.I.1    Klenov, M.S.2    Gvozdev, V.A.3
  • 30
    • 78149285872 scopus 로고    scopus 로고
    • Hen1 is required for oocyte development and piRNA stability in zebrafish
    • Kamminga LM, et al. 2010. Hen1 is required for oocyte development and piRNA stability in zebrafish. EMBO J. 29: 3688-3700.
    • (2010) EMBO J. , vol.29 , pp. 3688-3700
    • Kamminga, L.M.1
  • 31
    • 34548366485 scopus 로고    scopus 로고
    • The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs
    • Kirino Y, Mourelatos Z. 2007. The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs. RNA 13: 1397-1401.
    • (2007) RNA , vol.13 , pp. 1397-1401
    • Kirino, Y.1    Mourelatos, Z.2
  • 32
    • 67349281394 scopus 로고    scopus 로고
    • Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability
    • Kirino Y, et al. 2009. Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability. Nat Cell Biol. 11: 652-658.
    • (2009) Nat Cell Biol , vol.11 , pp. 652-658
    • Kirino, Y.1
  • 33
    • 33750831582 scopus 로고    scopus 로고
    • Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
    • Kohany O, Gentles AJ, Hankus L, Jurka J. 2006. Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor. BMC Bioinformatics 7: 474.
    • (2006) BMC Bioinformatics , vol.7 , pp. 474
    • Kohany, O.1    Gentles, A.J.2    Hankus, L.3    Jurka, J.4
  • 34
    • 78751560974 scopus 로고    scopus 로고
    • Recurrent adaptation in RNA interference genes across the Drosophila phylogeny
    • Kolaczkowski B, Hupalo DN, Kern AD. 2011. Recurrent adaptation in RNA interference genes across the Drosophila phylogeny.Mol Biol Evol. 28: 1033-1042.
    • (2011) Mol Biol Evol , vol.28 , pp. 1033-1042
    • Kolaczkowski, B.1    Hupalo, D.N.2    Kern, A.D.3
  • 36
    • 33746923401 scopus 로고    scopus 로고
    • Interplay of PIWI/Argonaute protein MIWI and kinesin KIF17b in chromatoid bodies of male germ cells
    • Kotaja N, Lin H, Parvinen M, Sassone-Corsi P. 2006. Interplay of PIWI/Argonaute protein MIWI and kinesin KIF17b in chromatoid bodies of male germ cells. J Cell Sci. 119: 2819-2825.
    • (2006) J Cell Sci , vol.119 , pp. 2819-2825
    • Kotaja, N.1    Lin, H.2    Parvinen, M.3    Sassone-Corsi, P.4
  • 37
    • 77951804331 scopus 로고    scopus 로고
    • MVH in piRNA processing and gene silencing of retrotransposons
    • Kuramochi-Miyagawa S, et al. 2010. MVH in piRNA processing and gene silencing of retrotransposons. Genes Dev. 24: 887-892.
    • (2010) Genes Dev , vol.24 , pp. 887-892
    • Kuramochi-Miyagawa, S.1
  • 38
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander ES, et al. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1
  • 39
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • Le SQ, Gascuel O. 2008. An improved general amino acid replacement matrix. Mol Biol Evol. 25: 1307-1320.
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 40
    • 70349687126 scopus 로고    scopus 로고
    • GASZ is essential for male meiosis and suppression of retrotransposon expression in the male germline
    • Ma L, et al. 2009. GASZ is essential for male meiosis and suppression of retrotransposon expression in the male germline. PLoS Genet. 5: e1000635.
    • (2009) PLoS Genet , vol.5
    • Ma, L.1
  • 41
    • 77957733519 scopus 로고    scopus 로고
    • Molecular evolution of piRNA and transposon control pathways in Drosophila
    • Malone CD, Hannon GJ. 2009. Molecular evolution of piRNA and transposon control pathways in Drosophila. Cold Spring Harb Symp Quant Biol. 74: 225-234.
    • (2009) Cold Spring Harb Symp Quant Biol , vol.74 , pp. 225-234
    • Malone, C.D.1    Hannon, G.J.2
  • 42
    • 84867667939 scopus 로고    scopus 로고
    • The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors
    • Mathioudakis N, et al. 2012. The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors. RNA 18: 2056-2072.
    • (2012) RNA , vol.18 , pp. 2056-2072
    • Mathioudakis, N.1
  • 43
    • 79960038582 scopus 로고    scopus 로고
    • Expansion of the Ago gene family in the teleost clade
    • McFarlane L, et al. 2011. Expansion of the Ago gene family in the teleost clade. Dev Genes Evol. 221: 95-104.
    • (2011) Dev Genes Evol , vol.221 , pp. 95-104
    • McFarlane, L.1
  • 44
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Mouse Genome Sequencing Consortium, et al
    • Mouse Genome Sequencing Consortium, et al. 2002. Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
  • 45
    • 33644996948 scopus 로고    scopus 로고
    • Natural selection drives extremely rapidevolutionin antiviralRNAigenes
    • Obbard DJ, Jiggins FM, Halligan DL, Little TJ. 2006. Natural selection drives extremely rapidevolutionin antiviralRNAigenes.CurrBiol.16: 580-585.
    • (2006) CurrBiol , vol.16 , pp. 580-585
    • Obbard, D.J.1    Jiggins, F.M.2    Halligan, D.L.3    Little, T.J.4
  • 46
    • 29144455282 scopus 로고    scopus 로고
    • De novo identification of repeat families in large genomes
    • DOI 10.1093/bioinformatics/bti1018
    • Price AL, Jones NC, Pevzner PA. 2005. De novo identification of repeat families in large genomes. Bioinformatics 21(Suppl. 1):i351-i358. (Pubitemid 41794508)
    • (2005) Bioinformatics , vol.21 , Issue.SUPPL. 1
    • Price, A.L.1    Jones, N.C.2    Pevzner, P.A.3
  • 48
    • 84858077472 scopus 로고    scopus 로고
    • The Pfam protein families database
    • Punta M, et al. 2012. The Pfam protein families database. Nucleic Acids Res. 40:D290-D301.
    • (2012) Nucleic Acids Res , vol.40
    • Punta, M.1
  • 49
    • 84880235349 scopus 로고    scopus 로고
    • The epigenetic regulator PLZF represses L1 retrotransposition in germ and progenitor cells
    • Puszyk W, et al. 2013. The epigenetic regulator PLZF represses L1 retrotransposition in germ and progenitor cells. EMBO J. 32: 1941-1952.
    • (2013) EMBO J. , vol.32 , pp. 1941-1952
    • Puszyk, W.1
  • 50
    • 67349141725 scopus 로고    scopus 로고
    • Loss of the Mili-interacting Tudor domaincontaining protein-1 activates transposons and alters the Miliassociated small RNA profile
    • Reuter M, et al. 2009. Loss of the Mili-interacting Tudor domaincontaining protein-1 activates transposons and alters the Miliassociated small RNA profile. Nat Struct Mol Biol. 16: 639-646.
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 639-646
    • Reuter, M.1
  • 51
    • 84878607707 scopus 로고    scopus 로고
    • The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits
    • Schartl M, et al. 2013. The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits. Nat Genet. 45: 567-72.
    • (2013) Nat Genet , vol.45 , pp. 567-572
    • Schartl, M.1
  • 52
    • 0042622380 scopus 로고    scopus 로고
    • SWISS-MODEL: An automated protein homology-modeling server
    • Schwede T, Kopp J, Guex N, Peitsch MC. 2003. SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res. 31: 3381-3385.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3381-3385
    • Schwede, T.1    Kopp, J.2    Guex, N.3    Peitsch, M.C.4
  • 54
    • 0028236525 scopus 로고
    • Essential role for KHdomains in RNA binding: Impaired RNA binding by amutation in the KHdomain of FMR1that causes fragile X syndrome
    • Siomi H, Choi M, SiomiMC, Nussbaum RL, Dreyfuss G. 1994. Essential role for KHdomains in RNA binding: impaired RNA binding by amutation in the KHdomain of FMR1that causes fragile X syndrome. Cell 77: 33-39.
    • (1994) Cell , vol.77 , pp. 33-39
    • Siomi, H.1    Choi, M.2    Siomi, M.C.3    Nussbaum, R.L.4    Dreyfuss, G.5
  • 55
    • 4444302947 scopus 로고    scopus 로고
    • Crystal structure of Argonaute and its implications for RISC slicer activity
    • Song JJ, Smith SK, Hannon GJ, Joshua-Tor L. 2004. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305: 1434-1437.
    • (2004) Science , vol.305 , pp. 1434-1437
    • Song, J.J.1    Smith, S.K.2    Hannon, G.J.3    Joshua-Tor, L.4
  • 56
    • 0035957018 scopus 로고    scopus 로고
    • Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals
    • SwansonWJ, Yang Z, Wolfner MF, Aquadro CF. 2001. Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals. Proc Natl Acad Sci U S A. 98: 2509-2514.
    • (2001) Proc Natl Acad Sci U S A. , vol.98 , pp. 2509-2514
    • Swanson, W.J.1    Yang, Z.2    Wolfner, M.F.3    Aquadro, C.F.4
  • 57
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, et al. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 28: 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1
  • 58
    • 63049126614 scopus 로고    scopus 로고
    • Using RepeatMasker to identify repetitive elements in genomic sequences
    • Chapter 4:Unit 4.10
    • Tarailo-Graovac M, Chen N. 2009. Using RepeatMasker to identify repetitive elements in genomic sequences. Curr Protoc Bioinformatics. Chapter 4:Unit 4.10.
    • (2009) Curr Protoc Bioinformatics
    • Tarailo-Graovac, M.1    Chen, N.2
  • 59
    • 79551634514 scopus 로고    scopus 로고
    • Structural basis for piRNA 20-O-methylated 30-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains
    • Tian Y, Simanshu DK, Ma JB, Patel DJ. 2011. Structural basis for piRNA 20-O-methylated 30-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains. Proc Natl Acad Sci U S A. 108: 903-910.
    • (2011) Proc Natl Acad Sci U S A. , vol.108 , pp. 903-910
    • Tian, Y.1    Simanshu, D.K.2    Ma, J.B.3    Patel, D.J.4
  • 61
    • 68149164399 scopus 로고    scopus 로고
    • Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members
    • Vagin VV, et al. 2009. Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members. Genes Dev. 23: 1749-1762.
    • (2009) Genes Dev , vol.23 , pp. 1749-1762
    • Vagin, V.V.1
  • 62
    • 43549124851 scopus 로고    scopus 로고
    • Structure and function of KH domains
    • Valverde R, Edwards L, Regan L. 2008. Structure and function of KH domains. FEBS J. 275: 2712-2726.
    • (2008) FEBS J. , vol.275 , pp. 2712-2726
    • Valverde, R.1    Edwards, L.2    Regan, L.3
  • 63
    • 33745441569 scopus 로고    scopus 로고
    • Positive selection drives the evolution of rhino, a member of the heterochromatin protein 1 family in Drosophila
    • Vermaak D, Henikoff S, Malik HS. 2005. Positive selection drives the evolution of rhino, a member of the heterochromatin protein 1 family in Drosophila. PLoS Genet. 1: 96-108.
    • (2005) PLoS Genet , vol.1 , pp. 96-108
    • Vermaak, D.1    Henikoff, S.2    Malik, H.S.3
  • 64
    • 15544377813 scopus 로고    scopus 로고
    • Genome evolution and biodiversity in teleost fish
    • Volff JN. 2005. Genome evolution and biodiversity in teleost fish. Heredity (Edinb) 94: 280-294.
    • (2005) Heredity (Edinb) , vol.94 , pp. 280-294
    • Volff, J.N.1
  • 65
    • 0345724809 scopus 로고    scopus 로고
    • Diversity of retrotransposable elements in compact pufferfish genomes
    • Volff JN, Bouneau L, Ozouf-Costaz C, Fischer C. 2003. Diversity of retrotransposable elements in compact pufferfish genomes. Trends Genet. 19: 674-678.
    • (2003) Trends Genet , vol.19 , pp. 674-678
    • Volff, J.N.1    Bouneau, L.2    Ozouf-Costaz, C.3    Fischer, C.4
  • 66
    • 79952525007 scopus 로고    scopus 로고
    • MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline
    • Watanabe T, et al. 2011. MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline. Dev Cell. 20: 364-375.
    • (2011) Dev Cell , vol.20 , pp. 364-375
    • Watanabe, T.1
  • 67
    • 0027306801 scopus 로고
    • Rapid sequence evolution of the mammalian sex-determining gene SRY
    • Whitfield LS, Lovell-Badge R, Goodfellow PN. 1993. Rapid sequence evolution of the mammalian sex-determining gene SRY. Nature 364: 713-715.
    • (1993) Nature , vol.364 , pp. 713-715
    • Whitfield, L.S.1    Lovell-Badge, R.2    Goodfellow, P.N.3
  • 68
    • 84866854050 scopus 로고    scopus 로고
    • A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing
    • Xiol J, et al. 2012. A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing. Mol Cell. 47: 970-979.
    • (2012) Mol Cell , vol.47 , pp. 970-979
    • Xiol, J.1
  • 69
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24: 1586-1591.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 70
    • 16344378246 scopus 로고    scopus 로고
    • Bayes empirical Bayes inference of amino acid sites under positive selection
    • Yang Z, Wong WS, Nielsen R. 2005. Bayes empirical Bayes inference of amino acid sites under positive selection. Mol Biol Evol. 22: 1107-1118.
    • (2005) Mol Biol Evol , vol.22 , pp. 1107-1118
    • Yang, Z.1    Wong, W.S.2    Nielsen, R.3
  • 71
    • 2442574906 scopus 로고    scopus 로고
    • Evolution of DMY, a newly emergent male sex-determination gene of medaka fish
    • Zhang J. 2004. Evolution of DMY, a newly emergent male sex-determination gene of medaka fish. Genetics 166: 1887-1895.
    • (2004) Genetics , vol.166 , pp. 1887-1895
    • Zhang, J.1
  • 72
    • 0032584099 scopus 로고    scopus 로고
    • Positive Darwinian selection after gene duplication in primate ribonuclease genes
    • Zhang J, Rosenberg HF, Nei M. 1998. Positive Darwinian selection after gene duplication in primate ribonuclease genes. Proc Natl Acad Sci U S A. 95: 3708-3713.
    • (1998) Proc Natl Acad Sci U S A. , vol.95 , pp. 3708-3713
    • Zhang, J.1    Rosenberg, H.F.2    Nei, M.3
  • 73
    • 77955406478 scopus 로고    scopus 로고
    • MouseMOV10L1 associateswith Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway
    • Zheng K, et al. 2010. MouseMOV10L1 associateswith Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway. Proc Natl Acad Sci U S A. 107: 11841-11846.
    • (2010) Proc Natl Acad Sci U S A. , vol.107 , pp. 11841-11846
    • Zheng, K.1
  • 74
    • 0035788655 scopus 로고    scopus 로고
    • Differential genome duplication and fish diversity
    • Zhou RJ, Cheng HH, Tiersch TR. 2001. Differential genome duplication and fish diversity. Rev Fish Biol Fish. 11: 331-337.
    • (2001) Rev Fish Biol Fish , vol.11 , pp. 331-337
    • Zhou, R.J.1    Cheng, H.H.2    Tiersch, T.R.3
  • 75
    • 79251583732 scopus 로고    scopus 로고
    • Profiling sex-specific piRNAs in zebrafish
    • Zhou X, et al. 2010. Profiling sex-specific piRNAs in zebrafish. Genetics 186: 1175-1185.
    • (2010) Genetics , vol.186 , pp. 1175-1185
    • Zhou, X.1


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