-
1
-
-
33745402414
-
A novel class of small RNAs bind to MILI protein in mouse testes
-
ARAVIN, A., D. GAIDATZIS, S. PFEFFER, M. LAGOS-QUINTANA, P. LANDGRAF et al., 2006 A novel class of small RNAs bind to MILI protein in mouse testes. Nature 442: 203-207.
-
(2006)
Nature
, vol.442
, pp. 203-207
-
-
Aravin, A.1
Gaidatzis, D.2
Pfeffer, S.3
Lagos-Quintana, M.4
Landgraf, P.5
-
2
-
-
0035838369
-
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
-
ARAVIN, A. A., N. M. NAUMOVA, A. V. TULIN, V. V. VAGIN, Y. M. ROZOVSKY et al., 2001 Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline. Curr. Biol. 11: 1017-1027.
-
(2001)
Curr. Biol.
, vol.11
, pp. 1017-1027
-
-
Aravin, A.A.1
Naumova, N.M.2
Tulin, A.V.3
Vagin, V.V.4
Rozovsky, Y.M.5
-
3
-
-
45849095711
-
Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing
-
AZUMA-MUKAI, A., H. OGURI, T. MITUYAMA, Z. R. QIAN, K. ASAI et al., 2008 Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing. Proc. Natl. Acad. Sci. USA 105: 7964-7969.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 7964-7969
-
-
Azuma-Mukai, A.1
Oguri, H.2
Mituyama, T.3
Qian, Z.R.4
Asai, K.5
-
4
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
BARTEL, D. P., 2004 MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116: 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
5
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
BRENNECKE, J., A. A. ARAVIN, A. STARK, M. DUS, M. KELLIS et al., 2007 Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 128: 1089-1103.
-
(2007)
Cell
, vol.128
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
-
6
-
-
33646137364
-
The diversity of RNA silencing pathways in plants
-
BRODERSEN, P., and O. VOINNET, 2006 The diversity of RNA silencing pathways in plants. Trends Genet. 22: 268-280.
-
(2006)
Trends Genet.
, vol.22
, pp. 268-280
-
-
Brodersen, P.1
Voinnet, O.2
-
7
-
-
33746492419
-
Molecular biology. A new RNA dimension to genome control
-
CARTHEW, R. W., 2006 Molecular biology. A new RNA dimension to genome control. Science 313: 305-306.
-
(2006)
Science
, vol.313
, pp. 305-306
-
-
Carthew, R.W.1
-
8
-
-
54449086787
-
piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline
-
CHAMBEYRON, S., A. POPKOVA, G. PAYEN-GROSCHENE, C. BRUN, D. LAOUINI et al., 2008 piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline. Proc. Natl. Acad. Sci. USA 105: 14964-14969.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 14964-14969
-
-
Chambeyron, S.1
Popkova, A.2
Payen-Groschene, G.3
Brun, C.4
Laouini, D.5
-
9
-
-
0036339614
-
HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower
-
CHEN, X., J. LIU, Y. CHENG and D. JIA, 2002 HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower. Development 129: 1085-1094.
-
(2002)
Development
, vol.129
, pp. 1085-1094
-
-
Chen, X.1
Liu, J.2
Cheng, Y.3
Jia, D.4
-
10
-
-
33745336617
-
A germline-specific class of small RNAs binds mammalian Piwi proteins
-
GIRARD, A., R. SACHIDANANDAM, G. J. HANNON and M. A. CARMELL, 2006 A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 442: 199-202.
-
(2006)
Nature
, vol.442
, pp. 199-202
-
-
Girard, A.1
Sachidanandam, R.2
Hannon, G.J.3
Carmell, M.A.4
-
11
-
-
33745621037
-
A novel class of small RNAs inmouse spermatogenic cells
-
GRIVNA, S. T., E. BEYRET, Z. WANG and H. LIN, 2006 A novel class of small RNAs inmouse spermatogenic cells. Genes Dev. 20: 1709-1714.
-
(2006)
Genes Dev.
, vol.20
, pp. 1709-1714
-
-
Grivna, S.T.1
Beyret, E.2
Wang, Z.3
Lin, H.4
-
12
-
-
33947390781
-
A slicer-mediated mechanism for repeat-associated siRNA 59 end formation in Drosophila
-
GUNAWARDANE, L. S., K. SAITO, K. M. NISHIDA, K. MIYOSHI, Y. KAWAMURA et al., 2007 A slicer-mediated mechanism for repeat-associated siRNA 59 end formation in Drosophila. Science 315: 1587-1590.
-
(2007)
Science
, vol.315
, pp. 1587-1590
-
-
Gunawardane, L.S.1
Saito, K.2
Nishida, K.M.3
Miyoshi, K.4
Kawamura, Y.5
-
13
-
-
34447291602
-
The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC
-
HORWICH, M. D., C. LI, C. MATRANGA, V. VAGIN, G. FARLEY et al., 2007 The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC. Curr. Biol. 17: 1265-1272.
-
(2007)
Curr. Biol.
, vol.17
, pp. 1265-1272
-
-
Horwich, M.D.1
Li, C.2
Matranga, C.3
Vagin, V.4
Farley, G.5
-
14
-
-
34047154356
-
A role for Piwi and piRNAs in germcell maintenance and transposon silencing in Zebrafish
-
HOUWING, S., L. M. KAMMINGA, E. BEREZIKOV, D. CRONEMBOLD, A. GIRARD et al., 2007 A role for Piwi and piRNAs in germcell maintenance and transposon silencing in Zebrafish. Cell 129: 69-82.
-
(2007)
Cell
, vol.129
, pp. 69-82
-
-
Houwing, S.1
Kamminga, L.M.2
Berezikov, E.3
Cronembold, D.4
Girard, A.5
-
15
-
-
54349089563
-
Zili is required for germ cell differentiation and meiosis in zebrafish
-
HOUWING, S., E. BEREZIKOV and R. F. KETTING, 2008 Zili is required for germ cell differentiation and meiosis in zebrafish. EMBO J. 27: 2702-2711.
-
(2008)
EMBO J.
, vol.27
, pp. 2702-2711
-
-
Houwing, S.1
Berezikov, E.2
Ketting, R.F.3
-
16
-
-
29544452864
-
Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions
-
IKEUCHI, Y., N. SHIGI, J. KATO, A. NISHIMURA and T. SUZUKI, 2006 Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions. Mol. Cell 21: 97-108.
-
(2006)
Mol. Cell
, vol.21
, pp. 97-108
-
-
Ikeuchi, Y.1
Shigi, N.2
Kato, J.3
Nishimura, A.4
Suzuki, T.5
-
17
-
-
21044446786
-
Functional genomic analysis of RNA interference in C. elegans
-
KIM, J. K., H. W. GABEL, R. S. KAMATH, M. TEWARI, A. PASQUINELLI et al., 2005 Functional genomic analysis of RNA interference in C. elegans. Science 308: 1164-1167.
-
(2005)
Science
, vol.308
, pp. 1164-1167
-
-
Kim, J.K.1
Gabel, H.W.2
Kamath, R.S.3
Tewari, M.4
Pasquinelli, A.5
-
19
-
-
34548366485
-
The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs
-
DOI 10.1261/rna.659307
-
KIRINO, Y., and Z. MOURELATOS, 2007a Themouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs. RNA 13: 1397-1401 (Pubitemid 47347410)
-
(2007)
RNA
, vol.13
, Issue.9
, pp. 1397-1401
-
-
Kirino, Y.1
Mourelatos, Z.2
-
20
-
-
34247259831
-
Mouse Piwi-interacting RNAs are 2′-O-methylated at their 3′ termini
-
KIRINO, Y., and Z. MOURELATOS, 2007b Mouse Piwi-interacting RNAs are 2′-O-methylated at their 3′ termini. Nat. Struct. Mol. Biol. 14: 347-348.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 347-348
-
-
Kirino, Y.1
Mourelatos, Z.2
-
21
-
-
38849167412
-
Biogenesis and germline functions of piRNAs
-
KLATTENHOFF, C., and W. THEURKAUF, 2008 Biogenesis and germline functions of piRNAs. Development 135: 3-9.
-
(2008)
Development
, vol.135
, pp. 3-9
-
-
Klattenhoff, C.1
Theurkauf, W.2
-
22
-
-
41649116098
-
DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes
-
KURAMOCHI-MIYAGAWA, S., T. WATANABE, K. GOTOH, Y. TOTOKI, A. TOYODA et al., 2008 DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes. Genes Dev. 22: 908-917.
-
(2008)
Genes Dev.
, vol.22
, pp. 908-917
-
-
Kuramochi-Miyagawa, S.1
Watanabe, T.2
Gotoh, K.3
Totoki, Y.4
Toyoda, A.5
-
23
-
-
62549159996
-
2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena
-
KURTH, H. M., and K. MOCHIZUKI, 2009 2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena. RNA 15: 675-685.
-
(2009)
RNA
, vol.15
, pp. 675-685
-
-
Kurth, H.M.1
Mochizuki, K.2
-
24
-
-
0035955361
-
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
-
LAU, N. C., L. P. LIM, E. G. WEINSTEIN and D. P. BARTEL, 2001 An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science 294: 858-862.
-
(2001)
Science
, vol.294
, pp. 858-862
-
-
Lau, N.C.1
Lim, L.P.2
Weinstein, E.G.3
Bartel, D.P.4
-
25
-
-
33746527679
-
Characterization of the piRNA complex from rat testes
-
LAU, N. C., A. G. SETO, J. KIM, S. KURAMOCHI-MIYAGAWA, T. NAKANO et al., 2006 Characterization of the piRNA complex from rat testes. Science 313: 363-367.
-
(2006)
Science
, vol.313
, pp. 363-367
-
-
Lau, N.C.1
Seto, A.G.2
Kim, J.3
Kuramochi-Miyagawa, S.4
Nakano, T.5
-
26
-
-
29944442623
-
Two classes of endogenous small RNAs in Tetrahymena thermophila
-
LEE, S. R., and K. COLLINS, 2006 Two classes of endogenous small RNAs in Tetrahymena thermophila. Genes Dev. 20: 28-33.
-
(2006)
Genes Dev.
, vol.20
, pp. 28-33
-
-
Lee, S.R.1
Collins, K.2
-
27
-
-
65549118489
-
Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies
-
LI, C., V. V. VAGIN, S. LEE, J. XU, S. MA et al., 2009 Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies. Cell 137: 509-521.
-
(2009)
Cell
, vol.137
, pp. 509-521
-
-
Li, C.1
Vagin, V.V.2
Lee, S.3
Xu, J.4
Ma, S.5
-
28
-
-
68549128834
-
PiRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in the Drosophila germline
-
LIM, A. K., L. TAO and T. KAI, 2009 piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in the Drosophila germline. J. Cell Biol. 186: 333-342.
-
(2009)
J. Cell Biol.
, vol.186
, pp. 333-342
-
-
Lim, A.K.1
Tao, L.2
Kai, T.3
-
29
-
-
65549105694
-
Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary
-
MALONE, C. D., J. BRENNECKE, M. DUS, A. STARK, W. R. McCOMBIE et al., 2009 Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. Cell 137: 522-535.
-
(2009)
Cell
, vol.137
, pp. 522-535
-
-
Malone, C.D.1
Brennecke, J.2
Dus, M.3
Stark, A.4
McCombie, W.R.5
-
30
-
-
40349090024
-
miRNA and piRNA localization in the male mammalian meiotic nucleus
-
MARCON, E., T. BABAK, G. CHUA, T. HUGHES and P. B. MOENS, 2008 miRNA and piRNA localization in the male mammalian meiotic nucleus. Chromosome Res. 16: 243-260.
-
(2008)
Chromosome Res.
, vol.16
, pp. 243-260
-
-
Marcon, E.1
Babak, T.2
Chua, G.3
Hughes, T.4
Moens, P.B.5
-
31
-
-
0037198690
-
DMY is a Y-specific DM-domain gene required for male development in the medaka fish
-
MATSUDA, M., Y. NAGAHAMA, A. SHINOMIYA, T. SATO, C. MATSUDA et al., 2002 DMY is a Y-specific DM-domain gene required for male development in the medaka fish. Nature 417: 559-563.
-
(2002)
Nature
, vol.417
, pp. 559-563
-
-
Matsuda, M.1
Nagahama, Y.2
Shinomiya, A.3
Sato, T.4
Matsuda, C.5
-
32
-
-
0017812675
-
Rat livernuclearskeleton and small molecular weight RNA species
-
MILLER, T. E., C. Y. HUANG and A. O. POGO, 1978 Rat livernuclearskeleton and small molecular weight RNA species. J. Cell Biol. 76: 692-704.
-
(1978)
J. Cell Biol.
, vol.76
, pp. 692-704
-
-
Miller, T.E.1
Huang, C.Y.2
Pogo, A.O.3
-
33
-
-
0037145031
-
Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena
-
MOCHIZUKI, K., N. A. FINE, T. FUJISAWA and M. A. GOROVSKY, 2002 Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena. Cell 110: 689-699.
-
(2002)
Cell
, vol.110
, pp. 689-699
-
-
Mochizuki, K.1
Fine, N.A.2
Fujisawa, T.3
Gorovsky, M.A.4
-
34
-
-
26944471385
-
RNA silencing in fungi: Mechanisms and applications
-
NAKAYASHIKI, H., 2005 RNA silencing in fungi: mechanisms and applications. FEBS Lett. 579: 5950-5957.
-
(2005)
FEBS Lett.
, vol.579
, pp. 5950-5957
-
-
Nakayashiki, H.1
-
35
-
-
0037015066
-
A duplicated copy of DMRT1 in the sex-determining region of the Y chromosome of the medaka, Oryzias latipes
-
NANDA, I., M. KONDO, U. HORNUNG, S. ASAKAWA, C. WINKLER et al., 2002 A duplicated copy of DMRT1 in the sex-determining region of the Y chromosome of the medaka, Oryzias latipes. Proc. Natl. Acad. Sci. USA 99: 11778-11783.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 11778-11783
-
-
Nanda, I.1
Kondo, M.2
Hornung, U.3
Asakawa, S.4
Winkler, C.5
-
36
-
-
34247199896
-
The 3′ termini of mouse Piwi-interacting RNAs are 2′-O-methylated
-
OHARA, T., Y. SAKAGUCHI, T. SUZUKI, H. UEDA and K. MIYAUCHI, 2007 The 3′ termini of mouse Piwi-interacting RNAs are 2′-O-methylated. Nat. Struct. Mol. Biol. 14: 349-350.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 349-350
-
-
Ohara, T.1
Sakaguchi, Y.2
Suzuki, T.3
Ueda, H.4
Miyauchi, K.5
-
37
-
-
34748824329
-
Cloning and expression profiling of testis-expressed piRNA-like RNAs
-
DOI 10.1261/rna.640307
-
RO, S., C. PARK, R. SONG, D. NGUYEN, J. JIN et al., 2007 Cloning and expression profiling of testis-expressed piRNA-like RNAs. RNA 13: 1693-1702. (Pubitemid 47481677)
-
(2007)
RNA
, vol.13
, Issue.10
, pp. 1693-1702
-
-
Ro, S.1
Park, C.2
Song, R.3
Nguyen, D.4
Jin, J.5
Sanders, K.M.6
Mccarrey, J.R.7
Yan, W.8
-
38
-
-
34347378274
-
Pimet, the Drosophila homolog of HEN1, mediates 2′-O-methylation of Piwi- interacting RNAs at their 3′ ends
-
SAITO, K., Y. SAKAGUCHI, T. SUZUKI, H. SIOMI and M. C. SIOMI, 2007 Pimet, the Drosophila homolog of HEN1, mediates 2′-O-methylation of Piwi- interacting RNAs at their 3′ ends. Genes Dev. 21: 1603-1608.
-
(2007)
Genes Dev.
, vol.21
, pp. 1603-1608
-
-
Saito, K.1
Sakaguchi, Y.2
Suzuki, T.3
Siomi, H.4
Siomi, M.C.5
-
39
-
-
58149333236
-
Sex determination and SRY: Down to a wink and a nudge?
-
SEKIDO, R., and R. LOVELL-BADGE, 2009 Sex determination and SRY: Down to a wink and a nudge? Trends Genet. 25: 19-29.
-
(2009)
Trends Genet.
, vol.25
, pp. 19-29
-
-
Sekido, R.1
Lovell-Badge, R.2
-
40
-
-
34347369277
-
Mass spectrometric analysis of 3′-terminal nucleosides in non-coding RNAs
-
doi: 10.1038/nprot.2007.185
-
SUZUKI, T., Y. SAKAGUCHI and T. SUZUKI, 2007 Mass spectrometric analysis of 3′-terminal nucleosides in non-coding RNAs. Nat. Protoc. doi: 10.1038/nprot.2007.185.
-
(2007)
Nat. Protoc.
-
-
Suzuki, T.1
Sakaguchi, Y.2
Suzuki, T.3
-
41
-
-
67650604265
-
Stressing out over tRNA cleavage
-
THOMPSON, D. M., and R. PARKER, 2009 Stressing out over tRNA cleavage. Cell 138: 215-219.
-
(2009)
Cell
, vol.138
, pp. 215-219
-
-
Thompson, D.M.1
Parker, R.2
-
42
-
-
65049086952
-
MILI, a PIWI-interacting RNA-binding protein, is required for germ line stem cell self-renewal and appears to positively regulate translation
-
UNHAVAITHAYA, Y., Y. HAO, E. BEYRET, H. YIN, S. KURAMOCHI-MIYAGAWA et al., 2009 MILI, a PIWI-interacting RNA-binding protein, is required for germ line stem cell self-renewal and appears to positively regulate translation. J. Biol. Chem. 284: 6507-6519.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 6507-6519
-
-
Unhavaithaya, Y.1
Hao, Y.2
Beyret, E.3
Yin, H.4
Kuramochi-Miyagawa, S.5
-
43
-
-
33746502166
-
A distinct small RNA pathway silences selfish genetic elements in the germline
-
VAGIN, V. V., A. SIGOVA, C. LI, H. SEITZ, V. GVOZDEV et al., 2006 A distinct small RNA pathway silences selfish genetic elements in the germline. Science 313: 320-324.
-
(2006)
Science
, vol.313
, pp. 320-324
-
-
Vagin, V.V.1
Sigova, A.2
Li, C.3
Seitz, H.4
Gvozdev, V.5
-
44
-
-
33645528966
-
Post-transcriptional small RNA pathways in plants: Mechanisms and regulations
-
VAUCHERET, H., 2006 Post-transcriptional small RNA pathways in plants: mechanisms and regulations. Genes Dev. 20: 759-771.
-
(2006)
Genes Dev.
, vol.20
, pp. 759-771
-
-
Vaucheret, H.1
-
45
-
-
33745599586
-
Identification and characterization of two novel classes of small RNAs in the mouse germline: Retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes
-
WATANABE, T., A. TAKEDA, T. TSUKIYAMA, K. MISE, T. OKUNO et al., 2006 Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes. Genes Dev. 20: 1732-1743.
-
(2006)
Genes Dev.
, vol.20
, pp. 1732-1743
-
-
Watanabe, T.1
Takeda, A.2
Tsukiyama, T.3
Mise, K.4
Okuno, T.5
-
46
-
-
70449604918
-
Pyrosequencing of small non-coding RNAs in HIV-1 infected cells: Evidence for the processing of a viral-cellular double-stranded RNA hybrid
-
YEUNG, M. L., Y. BENNASSER, K. WATASHI, S. Y. LE, L. HOUZET et al., 2009 Pyrosequencing of small non-coding RNAs in HIV-1 infected cells: evidence for the processing of a viral-cellular double-stranded RNA hybrid. Nucleic Acids Res. 37: 6575-6586.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 6575-6586
-
-
Yeung, M.L.1
Bennasser, Y.2
Watashi, K.3
Le, S.Y.4
Houzet, L.5
-
47
-
-
0031960778
-
The RNA product of the Doc retrotransposon is localized on the Drosophila oocyte cytoskeleton
-
ZHAO, D., and M. BOWNES, 1998 The RNA product of the Doc retrotransposon is localized on the Drosophila oocyte cytoskeleton. Mol. Gen. Genet. 257: 497-504.
-
(1998)
Mol. Gen. Genet.
, vol.257
, pp. 497-504
-
-
Zhao, D.1
Bownes, M.2
-
48
-
-
0035788655
-
Differential genome duplication and fish diversity
-
ZHOU, R., H. CHENG and T. TIERSCH, 2001 Differential genome duplication and fish diversity. Rev. Fish Biol. Fisher. 11: 331-337.
-
(2001)
Rev. Fish Biol. Fisher.
, vol.11
, pp. 331-337
-
-
Zhou, R.1
Cheng, H.2
Tiersch, T.3
|