-
1
-
-
79951711771
-
Zinc-finger nucleases: A panoramic view
-
Carroll D. Zinc-finger nucleases: a panoramic view. Curr Gene Ther 201111(1):2-10.
-
(2011)
Curr Gene Ther
, vol.11
, Issue.1
, pp. 2-10
-
-
Carroll, D.1
-
2
-
-
80051535219
-
Genome engineering with zinc-finger nucleases
-
Carroll D. Genome engineering with zinc-finger nucleases. Genetics 2011;188(4): 773-82.
-
(2011)
Genetics
, vol.188
, Issue.4
, pp. 773-782
-
-
Carroll, D.1
-
3
-
-
79951699566
-
Zinc-finger nuclease based genome surgery: It's all about specificity
-
Händel E-M, Cathomen T. Zinc-finger nuclease based genome surgery: it's all about specificity. Curr Gene Ther 2011; 11(1):28-37.
-
(2011)
Curr Gene Ther
, vol.11
, Issue.1
, pp. 28-37
-
-
Händel, E.-M.1
Cathomen, T.2
-
4
-
-
79951694132
-
Meganucleases and other tools for targeted genome engineering: Perspectives and challenges for gene therapy
-
Silva G, Poirot L, Galetto R, et al. Meganucleases and other tools for targeted genome engineering: perspectives and challenges for gene therapy. Curr Gene Ther 2011; 11(1):11-27.
-
(2011)
Curr Gene Ther
, vol.11
, Issue.1
, pp. 11-27
-
-
Silva, G.1
Poirot, L.2
Galetto, R.3
-
5
-
-
80053343092
-
TAL effectors: Customizable proteins for DNA targeting
-
Bogdanove AJ, Voytas DF. TAL effectors: customizable proteins for DNA targeting. Science 2011; 333(6051):1843-6.
-
(2011)
Science
, vol.333
, Issue.6051
, pp. 1843-1846
-
-
Bogdanove, A.J.1
Voytas, D.F.2
-
6
-
-
84877782609
-
Compact designer TALENs for efficient genome engineering
-
Beurdeley M, Bietz F, Li J, et al. Compact designer TALENs for efficient genome engineering. Nat Commun 2013; 4:1762.
-
(1762)
Nat Commun
, vol.2013
, pp. 4
-
-
Beurdeley, M.1
Bietz, F.2
Li, J.3
-
7
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
Cermak T, Doyle EL, Christian M, et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res 2011; 39(12):e82.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.12
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
-
8
-
-
84875618956
-
Efficient TALEN construction and evaluation methods for human cell and animal applications
-
Sakuma T, Hosoi S, Woltjen K, et al. Efficient TALEN construction and evaluation methods for human cell and animal applications. Genes Cells Devoted Mol Cell Mech 2013; 18(4):315-26.
-
(2013)
Genes Cells Devoted Mol Cell Mech
, vol.18
, Issue.4
, pp. 315-326
-
-
Sakuma, T.1
Hosoi, S.2
Woltjen, K.3
-
9
-
-
84866879789
-
Iterative capped assembly: Rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers
-
Briggs AW, Rios X, Chari R. Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers. Nucleic Acids Res 2012; 40(15):e117.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.15
-
-
Briggs, A.W.1
Rios, X.2
Chari, R.3
-
10
-
-
84934438162
-
TAL effector nuclease (TALEN) engineering
-
Li T, Yang B. TAL effector nuclease (TALEN) engineering. Methods Mol Biol 2013; 978:63-72.
-
(2013)
Methods Mol Biol
, vol.978
, pp. 63-72
-
-
Li, T.1
Yang, B.2
-
11
-
-
79960034141
-
Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes
-
Li T, Huang S, Zhao X, et al. Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes. Nucleic Acids Res 2011; 39(14):6315-25.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.14
, pp. 6315-6325
-
-
Li, T.1
Huang, S.2
Zhao, X.3
-
12
-
-
84864475122
-
TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: Tools for TAL effector design and target prediction
-
(Web Server issue
-
Doyle EL, Booher NJ, Standage DS, et al. TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction. Nucleic Acids Res 2012; 40(Web Server issue):W117-122.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Doyle, E.L.1
Booher, N.J.2
Standage, D.S.3
-
13
-
-
78951479577
-
Targeting DNA doublestrand breaks with TAL effector nucleases
-
Christian M, Cermak T, Doyle EL, et al. Targeting DNA doublestrand breaks with TAL effector nucleases. Genetics 2010; 186(2):757-61.
-
(2010)
Genetics
, vol.186
, Issue.2
, pp. 757-761
-
-
Christian, M.1
Cermak, T.2
Doyle, E.L.3
-
14
-
-
84872203111
-
A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes
-
Schmid-Burgk JL, Schmidt T, Kaiser V, Höning K, Hornung V. A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes. Nat Biotechnol 2013; 31(1):76-81.
-
(2013)
Nat Biotechnol
, vol.31
, Issue.1
, pp. 76-81
-
-
Schmid-Burgk, J.L.1
Schmidt, T.2
Kaiser, V.3
Höning, K.4
Hornung, V.5
-
15
-
-
80053039555
-
A Novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity
-
Mussolino C, Morbitzer R, Lütge F, Dannemann N, Lahaye T, Cathomen T. A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity. Nucleic Acids Res 2011; 39(21):9283-93.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.21
, pp. 9283-9293
-
-
Mussolino, C.1
Morbitzer, R.2
Lütge, F.3
Dannemann, N.4
Lahaye, T.5
Cathomen, T.6
-
16
-
-
79551685675
-
A TALE nuclease architecture for efficient genome editing
-
Miller JC, Tan S, Qiao G, et al. A TALE nuclease architecture for efficient genome editing. Nat Biotechnol 2011; 29(2):143-8.
-
(2011)
Nat Biotechnol
, vol.29
, Issue.2
, pp. 143-148
-
-
Miller, J.C.1
Tan, S.2
Qiao, G.3
-
17
-
-
84873493550
-
Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly
-
Reyon D, Khayter C, Regan MR, Joung JK, Sander JD. Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly. Curr Protoc Mol Biol 2012; Ch 12:Unit 12.15.
-
(2012)
Curr Protoc Mol Biol
, vol.12
, pp. 15
-
-
Reyon, D.1
Khayter, C.2
Regan, M.R.3
Joung, J.K.4
Sander, J.D.5
-
18
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon D, Tsai SQ, Khayter C, Foden JA, Sander JD, Joung JK. FLASH assembly of TALENs for high-throughput genome editing. Nat Biotechnol 2012; 30(5):460-5.
-
(2012)
Nat Biotechnol
, vol.30
, Issue.5
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khayter, C.3
Foden, J.A.4
Sander, J.D.5
Joung, J.K.6
-
19
-
-
84863678546
-
TAL effector RVD specificities and efficiencies
-
Streubel J, Blücher C, Landgraf A, Boch J. TAL effector RVD specificities and efficiencies. Nat Biotechnol 2012; 30(7):593-5.
-
(2012)
Nat Biotechnol
, vol.30
, Issue.7
, pp. 593-595
-
-
Streubel, J.1
Blücher, C.2
Landgraf, A.3
Boch, J.4
-
20
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek M, Chylinski K, Fonfara I, Hauer M, Doudna JA, Charpentier E. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 2012; 337(6096):816-21.
-
(2012)
Science
, vol.337
, Issue.6096
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
Charpentier, E.6
-
21
-
-
84874617789
-
Efficient genome editing in zebrafish using a CRISPR-Cas system
-
Hwang WY, Fu Y, Reyon D, et al. Efficient genome editing in zebrafish using a CRISPR-Cas system. Nat Biotechnol 2013; 31(3):227-9.
-
(2013)
Nat Biotechnol
, vol.31
, Issue.3
, pp. 227-229
-
-
Hwang, W.Y.1
Fu, Y.2
Reyon, D.3
-
22
-
-
84876575031
-
Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems
-
Dicarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GM. Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems. Nucleic Acids Res 2013; 41(7):4336-43.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.7
, pp. 4336-4343
-
-
Dicarlo, J.E.1
Norville, J.E.2
Mali, P.3
Rios, X.4
Aach, J.5
Church, G.M.6
-
23
-
-
84858659496
-
Mechanism of substrate selection by a highly specific CRISPR endoribonuclease
-
Sternberg SH, Haurwitz RE, Doudna JA. Mechanism of substrate selection by a highly specific CRISPR endoribonuclease. RNA 2012; 18(4):661-72.
-
(2012)
RNA
, vol.18
, Issue.4
, pp. 661-672
-
-
Sternberg, S.H.1
Haurwitz, R.E.2
Doudna, J.A.3
-
24
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
Cong L, Ran FA, Cox D, et al. Multiplex genome engineering using CRISPR/Cas systems. Science 2013; 339(6121):819-23.
-
(2013)
Science
, vol.339
, Issue.6121
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
-
25
-
-
84874687019
-
Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
-
Qi LS, Larson MH, Gilbert LA, et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 2013; 152(5):1173-83.
-
(2013)
Cell
, vol.152
, Issue.5
, pp. 1173-1183
-
-
Qi, L.S.1
Larson, M.H.2
Gilbert, L.A.3
-
26
-
-
84874608929
-
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
-
Jiang W, Bikard D, Cox D, Zhang F, Marraffini LA. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat Biotechnol 2013; 31(3):233-9.
-
(2013)
Nat Biotechnol
, vol.31
, Issue.3
, pp. 233-239
-
-
Jiang, W.1
Bikard, D.2
Cox, D.3
Zhang, F.4
Marraffini, L.A.5
-
27
-
-
84873734105
-
RNA-guided human genome engineering via Cas9
-
Mali P, Yang L, Esvelt KM, et al. RNA-guided human genome engineering via Cas9. Science 2013; 339(6121):823-6.
-
(2013)
Science
, vol.339
, Issue.6121
, pp. 823-826
-
-
Mali, P.1
Yang, L.2
Esvelt, K.M.3
-
28
-
-
84876567971
-
RNA-programmed genome editing in human cells
-
Jinek M, East A, Cheng A, Lin S, Ma E, Doudna J. RNA-programmed genome editing in human cells. Elife 2013; 2:e00471.
-
(2013)
Elife
, vol.2
-
-
Jinek, M.1
East, A.2
Cheng, A.3
Lin, S.4
Ma, E.5
Doudna, J.6
-
29
-
-
84875832964
-
RNA-protein analysis using a conditional CRISPR nuclease
-
Lee HY, Haurwitz RE, Apffel A, et al. RNA-protein analysis using a conditional CRISPR nuclease. Proc Natl Acad Sci U S A 2013; 110(14):5416-21.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, Issue.14
, pp. 5416-5421
-
-
Lee, H.Y.1
Haurwitz, R.E.2
Apffel, A.3
-
30
-
-
77955088422
-
TAL effectors: Finding plant genes for disease and defense
-
Bogdanove AJ, Schornack S, Lahaye T. TAL effectors: finding plant genes for disease and defense. Curr Opin Plant Biol 2010; 13(4):394-401.
-
(2010)
Curr Opin Plant Biol
, vol.13
, Issue.4
, pp. 394-401
-
-
Bogdanove, A.J.1
Schornack, S.2
Lahaye, T.3
-
31
-
-
77956126894
-
Xanthomonas AvrBs3 family-type III effectors: Discovery and function
-
Boch J, Bonas U. Xanthomonas AvrBs3 family-type III effectors: discovery and function. Annu Rev Phytopathol 2010; 48:419-36.
-
(2010)
Annu Rev Phytopathol
, vol.48
, pp. 419-436
-
-
Boch, J.1
Bonas, U.2
-
32
-
-
33750097480
-
Subterfuge and manipulation: Type III effector proteins of phytopathogenic bacteria
-
Grant SR, Fisher EJ, Chang JH, Mole BM, Dangl JL. Subterfuge and manipulation: type III effector proteins of phytopathogenic bacteria. Annu Rev Microbiol 2006; 60:425-49.
-
(2006)
Annu Rev Microbiol
, vol.60
, pp. 425-449
-
-
Grant, S.R.1
Fisher, E.J.2
Chang, J.H.3
Mole, B.M.4
Dangl, J.L.5
-
33
-
-
70350212942
-
The type III effectors of Xanthomonas
-
White FF, Potnis N, Jones JB, Koebnik R. The type III effectors of Xanthomonas. Mol Plant Pathol 2009; 10(6):749-66.
-
(2009)
Mol Plant Pathol
, vol.10
, Issue.6
, pp. 749-766
-
-
White, F.F.1
Potnis, N.2
Jones, J.B.3
Koebnik, R.4
-
34
-
-
4744364745
-
Type III secretion system effector proteins: Double agents in bacterial disease and plant defense
-
Alfano JR, Collmer A. Type III secretion system effector proteins: double agents in bacterial disease and plant defense. Annu Rev Phytopathol 2004; 42:385-414.
-
(2004)
Annu Rev Phytopathol
, vol.42
, pp. 385-414
-
-
Alfano, J.R.1
Collmer, A.2
-
35
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch J, Scholze H, Schornack S, et al. Breaking the code of DNA binding specificity of TAL-type III effectors. Science 2009; 326(5959):1509-12.
-
(2009)
Science
, vol.326
, Issue.5959
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
-
36
-
-
70349146307
-
Detailed analysis of the DNA recognition motifs of the Xanthomonas type III effectors AvrBs3 and AvrBs3Deltarep16
-
Kay S, Hahn S, Marois E, Wieduwild R, Bonas U. Detailed analysis of the DNA recognition motifs of the Xanthomonas type III effectors AvrBs3 and AvrBs3Deltarep16. Plant J 2009; 59(6):859-71.
-
(2009)
Plant J
, vol.59
, Issue.6
, pp. 859-871
-
-
Kay, S.1
Hahn, S.2
Marois, E.3
Wieduwild, R.4
Bonas, U.5
-
37
-
-
0032145159
-
AvrXa10 contains an acidic transcriptional activation domain in the functionally conserved C terminus
-
Zhu W, Yang B, Chittoor JM, Johnson LB, White FF. AvrXa10 contains an acidic transcriptional activation domain in the functionally conserved C terminus. Mol Plant Microbe Interact 1998; 11(8):824-32.
-
(1998)
Mol Plant Microbe Interact
, vol.11
, Issue.8
, pp. 824-832
-
-
Zhu, W.1
Yang, B.2
Chittoor, J.M.3
Johnson, L.B.4
White, F.F.5
-
38
-
-
59849120374
-
How Xanthomonas type III effectors manipulate the host plant
-
Kay S, Bonas U. How Xanthomonas type III effectors manipulate the host plant. Curr Opin Microbiol 2009; 12(1):37-43.
-
(2009)
Curr Opin Microbiol
, vol.12
, Issue.1
, pp. 37-43
-
-
Kay, S.1
Bonas, U.2
-
39
-
-
0034927988
-
Eukaryotic features of the Xanthomonas type III effector AvrBs3: Protein domains involved in transcriptional activation and the interaction with nuclear import receptors from pepper
-
Szurek B, Marois E, Bonas U, Van den Ackerveken G. Eukaryotic features of the Xanthomonas type III effector AvrBs3: protein domains involved in transcriptional activation and the interaction with nuclear import receptors from pepper. Plant J 2001; 26(5):523-34.
-
(2001)
Plant J
, vol.26
, Issue.5
, pp. 523-534
-
-
Szurek, B.1
Marois, E.2
Bonas, U.3
van den Ackerveken, G.4
-
40
-
-
0035205750
-
Molecular secrets of bacterial type III effector proteins
-
Lahaye T, Bonas U. Molecular secrets of bacterial type III effector proteins. Trends Plant Sci 2001; 6(10):479-85.
-
(2001)
Trends Plant Sci
, vol.6
, Issue.10
, pp. 479-485
-
-
Lahaye, T.1
Bonas, U.2
-
41
-
-
0024690540
-
Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomonas campestris pv. vesicatoria
-
Bonas U, Stall RE, Staskawicz B. Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomonas campestris pv. vesicatoria. Mol Gen Genet 1989; 218(1):127-36.
-
(1989)
Mol Gen Genet
, vol.218
, Issue.1
, pp. 127-136
-
-
Bonas, U.1
Stall, R.E.2
Staskawicz, B.3
-
42
-
-
0000776265
-
Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein
-
Herbers K, Conrads-Strauch J, Bonas U. Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein. Nature 1992; 356(6365):172-4.
-
(1992)
Nature
, vol.356
, Issue.6365
, pp. 172-174
-
-
Herbers, K.1
Conrads-Strauch, J.2
Bonas, U.3
-
43
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou MJ, Bogdanove AJ. A simple cipher governs DNA recognition by TAL effectors. Science 2009; 326(5959):1501.
-
(2009)
Science
, vol.326
, Issue.5959
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
44
-
-
84857032466
-
Structural basis for sequence-specific recognition of DNA by TAL effectors
-
Deng D, Yan C, Pan X, et al. Structural basis for sequence-specific recognition of DNA by TAL effectors. Science 2012; 335(6069):720-3.
-
(2012)
Science
, vol.335
, Issue.6069
, pp. 720-723
-
-
Deng, D.1
Yan, C.2
Pan, X.3
-
45
-
-
84873522297
-
TAL effectors: Function, structure, engineering and applications
-
Mak AN-S, Bradley P, Bogdanove AJ, Stoddard BL. TAL effectors: function, structure, engineering and applications. Curr Opin Struct Biol 2013; 23(1):93-9.
-
(2013)
Curr Opin Struct Biol
, vol.23
, Issue.1
, pp. 93-99
-
-
Mak, A.N.-S.1
Bradley, P.2
Bogdanove, A.J.3
Stoddard, B.L.4
-
46
-
-
84870583046
-
Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region
-
Gao H, Wu X, Chai J, Han Z. Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region. Cell Res 2012; 22(12):1716-20.
-
(2012)
Cell Res
, vol.22
, Issue.12
, pp. 1716-1720
-
-
Gao, H.1
Wu, X.2
Chai, J.3
Han, Z.4
-
47
-
-
84876009936
-
Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites
-
Grau J, Wolf A, Reschke M, Bonas U, Posch S, Boch J. Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites. Plos Comput Biol 2013; 9(3):e1002962.
-
(2013)
Plos Comput Biol
, vol.9
, Issue.3
-
-
Grau, J.1
Wolf, A.2
Reschke, M.3
Bonas, U.4
Posch, S.5
Boch, J.6
-
48
-
-
78349278103
-
TAL effector-DNA specificity
-
Scholze H, Boch J. TAL effector-DNA specificity. Virulence 2010; 1(5):428-32.
-
(2010)
Virulence
, vol.1
, Issue.5
, pp. 428-432
-
-
Scholze, H.1
Boch, J.2
-
49
-
-
84857029597
-
The crystal structure of TAL effector PthXo1 bound to its DNA target
-
Mak AN-S, Bradley P, Cernadas RA, Bogdanove AJ, Stoddard BL. The crystal structure of TAL effector PthXo1 bound to its DNA target. Science 2012; 335(6069):716-9.
-
(2012)
Science
, vol.335
, Issue.6069
, pp. 716-719
-
-
Mak, A.N.-S.1
Bradley, P.2
Cernadas, R.A.3
Bogdanove, A.J.4
Stoddard, B.L.5
-
50
-
-
84869046680
-
Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation
-
Valton J, Dupuy A, Daboussi F, et al. Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation. J Biol Chem 2012; 287(46):38427-32.
-
(2012)
J Biol Chem
, vol.287
, Issue.46
, pp. 38427-38432
-
-
Valton, J.1
Dupuy, A.2
Daboussi, F.3
-
51
-
-
73949106226
-
A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens
-
Römer P, Recht S, Lahaye T. A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens. Proc Natl Acad Sci U S A 2009; 106(48):20526-31.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.48
, pp. 20526-20531
-
-
Römer, P.1
Recht, S.2
Lahaye, T.3
-
52
-
-
84871519181
-
TALENs: A widely applicable technology for targeted genome editing
-
Joung JK, Sander JD. TALENs: a widely applicable technology for targeted genome editing. Nat Rev Mol Cell Biol 2013; 14(1):49-55.
-
(2013)
Nat Rev Mol Cell Biol
, vol.14
, Issue.1
, pp. 49-55
-
-
Joung, J.K.1
Sander, J.D.2
-
53
-
-
84865513069
-
TALE nucleases: Tailored genome engineering made easy
-
Mussolino C, Cathomen T. TALE nucleases: tailored genome engineering made easy. Curr Opin Biotechnol 2012; 23(5):644-50.
-
(2012)
Curr Opin Biotechnol
, vol.23
, Issue.5
, pp. 644-650
-
-
Mussolino, C.1
Cathomen, T.2
-
54
-
-
84880287458
-
Characterization and DNA-Binding Specificities of Ralstonia TAL-like Effectors
-
[Epub ahead of print]
-
Li L, Atef A, Piatek A, et al. Characterization and DNA-Binding Specificities of Ralstonia TAL-like Effectors, Mol Plant 2013; [Epub ahead of print].
-
(2013)
Mol Plant
-
-
Li, L.1
Atef, A.2
Piatek, A.3
-
55
-
-
69949117277
-
Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products
-
Mukaihara T, Tamura N. Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products. Microbiol Read Engl 2009; 155(Pt 7):2235-44.
-
(2009)
Microbiol Read Engl
, vol.155
, Issue.PART. 7
, pp. 2235-2244
-
-
Mukaihara, T.1
Tamura, N.2
-
56
-
-
78651270582
-
TAL nucleases (TALNs): Hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain
-
Li T, Huang S, Jiang WZ, et al. TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain. Nucleic Acids Res 2011; 39(1):359-72.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.1
, pp. 359-372
-
-
Li, T.1
Huang, S.2
Jiang, W.Z.3
-
57
-
-
84873733109
-
A TALEN genome-editing system for generating human stem cell-based disease models
-
Ding Q, Lee Y-K, Schaefer EAK, et al. A TALEN genome-editing system for generating human stem cell-based disease models. Cell Stem Cell 2013; 12(2):238-51.
-
(2013)
Cell Stem Cell
, vol.12
, Issue.2
, pp. 238-251
-
-
Ding, Q.1
Lee, Y.-K.2
Schaefer, E.A.K.3
-
58
-
-
78650912707
-
Enhancing zinc-fingernuclease activity with improved obligate heterodimeric architectures
-
Doyon Y, Vo TD, Mendel MC, et al. Enhancing zinc-fingernuclease activity with improved obligate heterodimeric architectures. Nat Methods 2011; 8(1):74-9.
-
(2011)
Nat Methods
, vol.8
, Issue.1
, pp. 74-79
-
-
Doyon, Y.1
Vo, T.D.2
Mendel, M.C.3
-
60
-
-
0034940222
-
Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites
-
Edgell DR, Shub DA. Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites. Proc Natl Acad Sci U S A 2001; 98(14):7898-903.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, Issue.14
, pp. 7898-7903
-
-
Edgell, D.R.1
Shub, D.A.2
-
61
-
-
0037172989
-
Zinc finger as distance determinant in the flexible linker of intron endonuclease I-TevI
-
Dean AB, Stanger MJ, Dansereau JT, Van Roey P, Derbyshire V, Belfort M. Zinc finger as distance determinant in the flexible linker of intron endonuclease I-TevI. Proc Natl Acad Sci U S A 2002; 99(13):8554-61.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, Issue.13
, pp. 8554-8561
-
-
Dean, A.B.1
Stanger, M.J.2
Dansereau, J.T.3
van Roey, P.4
Derbyshire, V.5
Belfort, M.6
-
62
-
-
84861428291
-
Monomeric site-specific nucleases for genome editing
-
Kleinstiver BP, Wolfs JM, Kolaczyk T, Roberts AK, Hu SX, Edgell DR. Monomeric site-specific nucleases for genome editing. Proc Natl Acad Sci U S A 2012; 109(21):8061-6.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.21
, pp. 8061-8066
-
-
Kleinstiver, B.P.1
Wolfs, J.M.2
Kolaczyk, T.3
Roberts, A.K.4
Hu, S.X.5
Edgell, D.R.6
-
63
-
-
78650432023
-
The I-CreI meganuclease and its engineered derivatives: Applications from cell modification to gene therapy
-
Arnould S, Delenda C, Grizot S, et al. The I-CreI meganuclease and its engineered derivatives: applications from cell modification to gene therapy. Protein Eng Des Sel Peds 2011; 24(1-2):27-31.
-
(2011)
Protein Eng Des Sel Peds
, vol.24
, Issue.1-2
, pp. 27-31
-
-
Arnould, S.1
Delenda, C.2
Grizot, S.3
-
64
-
-
33847246298
-
Meganucleases and DNA double-strand break-induced recombination: Perspectives for gene therapy
-
Pâques F, Duchateau P. Meganucleases and DNA double-strand break-induced recombination: perspectives for gene therapy. Curr Gene Ther 2007; 7(1):49-66.
-
(2007)
Curr Gene Ther
, vol.7
, Issue.1
, pp. 49-66
-
-
Pâques, F.1
Duchateau, P.2
-
65
-
-
84865240239
-
Engineering domain fusion chimeras from I-OnuI family LAGLIDADG homing endonucleases
-
Baxter S, Lambert AR, Kuhar R, et al. Engineering domain fusion chimeras from I-OnuI family LAGLIDADG homing endonucleases. Nucleic Acids Res 2012; 40(16):7985-8000.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.16
, pp. 7985-8000
-
-
Baxter, S.1
Lambert, A.R.2
Kuhar, R.3
-
66
-
-
77949885922
-
Homing endonucleases: From basics to therapeutic applications
-
Marcaida MJ, Muñoz IG, Blanco FJ, Prieto J, Montoya G. Homing endonucleases: from basics to therapeutic applications. Cell Mol Life Sci Cmls 2010; 67(5):727-48.
-
(2010)
Cell Mol Life Sci Cmls
, vol.67
, Issue.5
, pp. 727-748
-
-
Marcaida, M.J.1
Muñoz, I.G.2
Blanco, F.J.3
Prieto, J.4
Montoya, G.5
-
67
-
-
78651240053
-
Homing endonucleases: From microbial genetic invaders to reagents for targeted DNA modification
-
Stoddard BL. Homing endonucleases: from microbial genetic invaders to reagents for targeted DNA modification. Structure 2011; 19(1):7-15.
-
(2011)
Structure
, vol.19
, Issue.1
, pp. 7-15
-
-
Stoddard, B.L.1
-
68
-
-
80051964399
-
Tapping natural reservoirs of homing endonucleases for targeted gene modification
-
Takeuchi R, Lambert AR, Mak AN-S. Tapping natural reservoirs of homing endonucleases for targeted gene modification. Proc Natl Acad Sci U S A 2011; 108(32):13077-82.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.32
, pp. 13077-13082
-
-
Takeuchi, R.1
Lambert, A.R.2
Mak, A.N.-S.3
-
69
-
-
33845914020
-
A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
-
Smith J, Grizot S, Arnould S, et al. A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences. Nucleic Acids Res 2006; 34(22):e149.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.22
-
-
Smith, J.1
Grizot, S.2
Arnould, S.3
-
70
-
-
70350635776
-
Exploitation of binding energy for catalysis and design
-
Thyme SB, Jarjour J, Takeuchi R, et al. Exploitation of binding energy for catalysis and design. Nature 2009; 461(7268):1300-4.
-
(2009)
Nature
, vol.461
, Issue.7268
, pp. 1300-1304
-
-
Thyme, S.B.1
Jarjour, J.2
Takeuchi, R.3
-
71
-
-
84934442376
-
Flow cytometric assays for interrogating LAGLIDADG homing endonuclease DNA-binding and cleavage properties
-
Baxter SK, Lambert AR, Scharenberg AM, Jarjour J. Flow cytometric assays for interrogating LAGLIDADG homing endonuclease DNA-binding and cleavage properties. Methods Mol Biol 2013; 978:45-61.
-
(2013)
Methods Mol Biol
, vol.978
, pp. 45-61
-
-
Baxter, S.K.1
Lambert, A.R.2
Scharenberg, A.M.3
Jarjour, J.4
-
72
-
-
63349094041
-
Optimization of in vivo activity of a bifunctional homing endonuclease and maturase reverses evolutionary degradation
-
Takeuchi R, Certo M, Caprara MG, Scharenberg AM, Stoddard BL. Optimization of in vivo activity of a bifunctional homing endonuclease and maturase reverses evolutionary degradation. Nucleic Acids Res 2009; 37(3):877-90.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.3
, pp. 877-890
-
-
Takeuchi, R.1
Certo, M.2
Caprara, M.G.3
Scharenberg, A.M.4
Stoddard, B.L.5
-
73
-
-
77957242130
-
Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation
-
Anderson BR, Muramatsu H, Nallagatla SR, et al. Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation. Nucleic Acids Res 2010; 38(17):5884-92.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.17
, pp. 5884-5892
-
-
Anderson, B.R.1
Muramatsu, H.2
Nallagatla, S.R.3
-
74
-
-
77952728325
-
Differential effects of nucleotide analogs on scanning-dependent initiation and elongation of mammalian mRNA translation in vitro
-
Aspden JL, Jackson RJ. Differential effects of nucleotide analogs on scanning-dependent initiation and elongation of mammalian mRNA translation in vitro. RNA 2010;16(6):1130-7.
-
(2010)
RNA
, vol.16
, Issue.6
, pp. 1130-1137
-
-
Aspden, J.L.1
Jackson, R.J.2
-
75
-
-
84876389220
-
Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells
-
Holkers M, Maggio I, Liu J, et al. Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells. Nucleic Acids Res 2013; 41(5):e63.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.5
-
-
Holkers, M.1
Maggio, I.2
Liu, J.3
-
76
-
-
78649336706
-
The DNA damage response: Making it safe to play with knives
-
Ciccia A, Elledge SJ. The DNA damage response: making it safe to play with knives. Mol Cell 2010; 40(2):179-204.
-
(2010)
Mol Cell
, vol.40
, Issue.2
, pp. 179-204
-
-
Ciccia, A.1
Elledge, S.J.2
-
77
-
-
84867061435
-
Coupling endonucleases with DNA end-processing enzymes to drive gene disruption
-
Certo MT, Gwiazda KS, Kuhar R, et al. Coupling endonucleases with DNA end-processing enzymes to drive gene disruption. Nat Methods 2012; 9(10):973-5.
-
(2012)
Nat Methods
, vol.9
, Issue.10
, pp. 973-975
-
-
Certo, M.T.1
Gwiazda, K.S.2
Kuhar, R.3
-
78
-
-
84872862315
-
High frequency targeted mutagenesis using engineered endonucleases and DNA-end processing enzymes
-
Delacôte F, Perez C, Guyot V, et al. High frequency targeted mutagenesis using engineered endonucleases and DNA-end processing enzymes. Plos One 2013; 8(1):e53217.
-
(2013)
Plos One
, vol.8
, Issue.1
-
-
Delacôte, F.1
Perez, C.2
Guyot, V.3
-
79
-
-
80755187806
-
Double-strand break end resection and repair pathway choice
-
Symington LS, Gautier J. Double-strand break end resection and repair pathway choice. Annu Rev Genet 2011; 45:247-71.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 247-271
-
-
Symington, L.S.1
Gautier, J.2
-
80
-
-
70350504453
-
The DNA-damage response in human biology and disease
-
Jackson SP, Bartek J. The DNA-damage response in human biology and disease. Nature 2009; 461(7267):1071-8.
-
(2009)
Nature
, vol.461
, Issue.7267
, pp. 1071-1078
-
-
Jackson, S.P.1
Bartek, J.2
-
81
-
-
84865620494
-
Recognition, signaling, and repair of DNA doublestrand breaks produced by ionizing radiation in mammalian cells: The molecular choreography
-
Thompson LH. Recognition, signaling, and repair of DNA doublestrand breaks produced by ionizing radiation in mammalian cells: the molecular choreography. Mutat Res 2012; 751(2):158-246.
-
(2012)
Mutat Res
, vol.751
, Issue.2
, pp. 158-246
-
-
Thompson, L.H.1
-
82
-
-
79952762235
-
Factors determining DNA double-strand break repair pathway choice in G2 phase
-
Shibata A, Conrad S, Birraux J, et al. Factors determining DNA double-strand break repair pathway choice in G2 phase. EMBO J 2011; 30(6):1079-92.
-
(2011)
EMBO J
, vol.30
, Issue.6
, pp. 1079-1092
-
-
Shibata, A.1
Conrad, S.2
Birraux, J.3
-
83
-
-
46949095221
-
Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases
-
Perez EE, Wang J, Miller JC, et al. Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases. Nat Biotechnol 2008; 26(7):808-16.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.7
, pp. 808-816
-
-
Perez, E.E.1
Wang, J.2
Miller, J.C.3
-
84
-
-
78650735673
-
Human hematopoietic stem/progenitor cells modified by zinc-finger nucleases targeted to CCR5 control HIV-1 in vivo
-
Holt N, Wang J, Kim K, et al. Human hematopoietic stem/progenitor cells modified by zinc-finger nucleases targeted to CCR5 control HIV-1 in vivo. Nat Biotechnol 2010; 28(8):839-47.
-
(2010)
Nat Biotechnol
, vol.28
, Issue.8
, pp. 839-847
-
-
Holt, N.1
Wang, J.2
Kim, K.3
-
85
-
-
84862496486
-
A foundation for universal T-cell based immunotherapy: T cells engineered to express a CD19specific chimeric-antigen-receptor and eliminate expression of endogenous TCR
-
Torikai H, Reik A, Liu P-Q, et al. A foundation for universal T-cell based immunotherapy: T cells engineered to express a CD19specific chimeric-antigen-receptor and eliminate expression of endogenous TCR. Blood 2012; 119(24):5697-705.
-
(2012)
Blood
, vol.119
, Issue.24
, pp. 5697-5705
-
-
Torikai, H.1
Reik, A.2
Liu, P.-Q.3
-
86
-
-
79960978444
-
Tracking genome engineering outcome at individual DNA breakpoints
-
Certo MT, Ryu BY, Annis JE, et al. Tracking genome engineering outcome at individual DNA breakpoints. Nat Methods 2011; 8(8):671-6.
-
(2011)
Nat Methods
, vol.8
, Issue.8
, pp. 671-676
-
-
Certo, M.T.1
Ryu, B.Y.2
Annis, J.E.3
-
87
-
-
77953023690
-
Transient cold shock enhances zinc-finger nuclease-mediated gene disruption
-
Doyon Y, Choi VM, Xia DF, Vo TD, Gregory PD, Holmes MC. Transient cold shock enhances zinc-finger nuclease-mediated gene disruption. Nat Methods 2010; 7(6):459-60.
-
(2010)
Nat Methods
, vol.7
, Issue.6
, pp. 459-460
-
-
Doyon, Y.1
Choi, V.M.2
Xia, D.F.3
Vo, T.D.4
Gregory, P.D.5
Holmes, M.C.6
-
88
-
-
73349098442
-
Limiting the persistence of a chromosome break diminishes its mutagenic potential
-
Bennardo N, Gunn A, Cheng A, Hasty P, Stark JM. Limiting the persistence of a chromosome break diminishes its mutagenic potential. Plos Genet 2009; 5(10):e1000683.
-
(2009)
Plos Genet
, vol.5
, Issue.10
-
-
Bennardo, N.1
Gunn, A.2
Cheng, A.3
Hasty, P.4
Stark, J.M.5
-
89
-
-
79959814259
-
DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation
-
Simsek D, Brunet E, Wong SY-W, et al. DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation. Plos Genet 2011; 7(6):e1002080.
-
(2011)
Plos Genet
, vol.7
, Issue.6
-
-
Simsek, D.1
Brunet, E.2
Wong, S.Y.-W.3
-
90
-
-
84863116082
-
Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1
-
Boboila C, Oksenych V, Gostissa M, et al. Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1). Proc Natl Acad Sci U S A 2012; 109(7):2473-8.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.7
, pp. 2473-2478
-
-
Boboila, C.1
Oksenych, V.2
Gostissa, M.3
-
91
-
-
84862745388
-
Chromosomal context and epigenetic mechanisms control the efficacy of genome editing by rare-cutting designer endonucleases
-
Daboussi F, Zaslavskiy M, Poirot L, et al. Chromosomal context and epigenetic mechanisms control the efficacy of genome editing by rare-cutting designer endonucleases. Nucleic Acids Res 2012; 40(13):6367-79.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.13
, pp. 6367-6379
-
-
Daboussi, F.1
Zaslavskiy, M.2
Poirot, L.3
-
92
-
-
82355183141
-
Zinc-finger nucleases-based genome engineering to generate isogenic human cell lines
-
Dreyer A-K, Cathomen T. Zinc-finger nucleases-based genome engineering to generate isogenic human cell lines. Methods Mol Biol 2012; 813:145-56.
-
(2012)
Methods Mol Biol
, vol.813
, pp. 145-156
-
-
Dreyer, A.-K.1
Cathomen, T.2
-
93
-
-
33750969980
-
Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break
-
Radecke F, Peter I, Radecke S, Gellhaus K, Schwarz K, Cathomen T. Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break. Mol Ther 2006; 14(6):798-808.
-
(2006)
Mol Ther
, vol.14
, Issue.6
, pp. 798-808
-
-
Radecke, F.1
Peter, I.2
Radecke, S.3
Gellhaus, K.4
Schwarz, K.5
Cathomen, T.6
-
94
-
-
80052292973
-
High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases
-
Chen F, Pruett-Miller SM, Huang Y, et al. High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases. Nat Methods 2011; 8(9):753-5.
-
(2011)
Nat Methods
, vol.8
, Issue.9
, pp. 753-755
-
-
Chen, F.1
Pruett-Miller, S.M.2
Huang, Y.3
-
95
-
-
77950521498
-
Zinc-finger nuclease-induced gene repair with oligodeoxynucleotides: Wanted and unwanted target locus modifications
-
Radecke S, Radecke F, Cathomen T, Schwarz K. Zinc-finger nuclease-induced gene repair with oligodeoxynucleotides: wanted and unwanted target locus modifications. Mol Ther 2010; 18(4):743-53.
-
(2010)
Mol Ther
, vol.18
, Issue.4
, pp. 743-753
-
-
Radecke, S.1
Radecke, F.2
Cathomen, T.3
Schwarz, K.4
-
96
-
-
38349145553
-
Importance of the cell cycle phase for the choice of the appropriate DSB repair pathway, for genome stability maintenance: The trans-S double-strand break repair model
-
Delacôte F, Lopez BS. Importance of the cell cycle phase for the choice of the appropriate DSB repair pathway, for genome stability maintenance: the trans-S double-strand break repair model. Cell Cycle 2008; 7(1):33-8.
-
(2008)
Cell Cycle
, vol.7
, Issue.1
, pp. 33-38
-
-
Delacôte, F.1
Lopez, B.S.2
-
97
-
-
84860137732
-
Identification of genes regulating gene targeting by a high-throughput screening approach
-
Delacôte F, Perez C, Guyot V, et al. Identification of genes regulating gene targeting by a high-throughput screening approach. J Nucleic Acids 2011; 2011:947212.
-
(2011)
J Nucleic Acids
, vol.2011
, pp. 947212
-
-
Delacôte, F.1
Perez, C.2
Guyot, V.3
-
98
-
-
0347988236
-
Dynamics of DNA doublestrand breaks revealed by clustering of damaged chromosome domains
-
Aten JA, Stap J, Krawczyk PM, et al. Dynamics of DNA doublestrand breaks revealed by clustering of damaged chromosome domains. Science 2004; 303(5654):92-5.
-
(2004)
Science
, vol.303
, Issue.5654
, pp. 92-95
-
-
Aten, J.A.1
Stap, J.2
Krawczyk, P.M.3
-
99
-
-
41549083291
-
Current topics in DNA double-strand break repair
-
Kobayashi J, Iwabuchi K, Miyagawa K, et al. Current topics in DNA double-strand break repair. J Radiat Res 2008; 49(2):93-103.
-
(2008)
J Radiat Res
, vol.49
, Issue.2
, pp. 93-103
-
-
Kobayashi, J.1
Iwabuchi, K.2
Miyagawa, K.3
-
100
-
-
33747889217
-
Differential usage of non-homologous end-joining and homologous recombination in double strand break repair
-
Sonoda E, Hochegger H, Saberi A, Taniguchi Y, Takeda S. Differential usage of non-homologous end-joining and homologous recombination in double strand break repair. DNA Repair 2006; 5(9/10):1021-9.
-
(2006)
DNA Repair
, vol.5
, Issue.9-10
, pp. 1021-1029
-
-
Sonoda, E.1
Hochegger, H.2
Saberi, A.3
Taniguchi, Y.4
Takeda, S.5
-
101
-
-
0042632901
-
Pathways of DNA double-strand break repair during the mammalian cell cycle
-
Rothkamm K, Krüger I, Thompson LH, Löbrich M. Pathways of DNA double-strand break repair during the mammalian cell cycle. Mol Cell Biol 2003; 23(16):5706-15.
-
(2003)
Mol Cell Biol
, vol.23
, Issue.16
, pp. 5706-5715
-
-
Rothkamm, K.1
Krüger, I.2
Thompson, L.H.3
Löbrich, M.4
|