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Volumn 13, Issue 4, 2013, Pages 291-303

Genome engineering with TAL-effector nucleases and alternative modular nuclease technologies

Author keywords

DNA repair; Double strand break; Exonuclease; Genome engineering; Homing endonuclease; Meganuclease; Nuclease; TALEN; ZFN; Zinc finger nuclease

Indexed keywords

DNA BINDING PROTEIN; ENDONUCLEASE I TEVI; MEGANUCLEASE; NUCLEASE; PEPTIDES AND PROTEINS; POLYPEPTIDE; RAD52 PROTEIN; RNA GUIDED ENDONUCLEASE; TAL EFFECTOR NUCLEASE; TRACKING PROTEIN; UNCLASSIFIED DRUG; ZINC FINGER NUCLEASE;

EID: 84888107953     PISSN: 15665232     EISSN: 18755631     Source Type: Journal    
DOI: 10.2174/15665232113139990026     Document Type: Article
Times cited : (34)

References (102)
  • 1
    • 79951711771 scopus 로고    scopus 로고
    • Zinc-finger nucleases: A panoramic view
    • Carroll D. Zinc-finger nucleases: a panoramic view. Curr Gene Ther 201111(1):2-10.
    • (2011) Curr Gene Ther , vol.11 , Issue.1 , pp. 2-10
    • Carroll, D.1
  • 2
    • 80051535219 scopus 로고    scopus 로고
    • Genome engineering with zinc-finger nucleases
    • Carroll D. Genome engineering with zinc-finger nucleases. Genetics 2011;188(4): 773-82.
    • (2011) Genetics , vol.188 , Issue.4 , pp. 773-782
    • Carroll, D.1
  • 3
    • 79951699566 scopus 로고    scopus 로고
    • Zinc-finger nuclease based genome surgery: It's all about specificity
    • Händel E-M, Cathomen T. Zinc-finger nuclease based genome surgery: it's all about specificity. Curr Gene Ther 2011; 11(1):28-37.
    • (2011) Curr Gene Ther , vol.11 , Issue.1 , pp. 28-37
    • Händel, E.-M.1    Cathomen, T.2
  • 4
    • 79951694132 scopus 로고    scopus 로고
    • Meganucleases and other tools for targeted genome engineering: Perspectives and challenges for gene therapy
    • Silva G, Poirot L, Galetto R, et al. Meganucleases and other tools for targeted genome engineering: perspectives and challenges for gene therapy. Curr Gene Ther 2011; 11(1):11-27.
    • (2011) Curr Gene Ther , vol.11 , Issue.1 , pp. 11-27
    • Silva, G.1    Poirot, L.2    Galetto, R.3
  • 5
    • 80053343092 scopus 로고    scopus 로고
    • TAL effectors: Customizable proteins for DNA targeting
    • Bogdanove AJ, Voytas DF. TAL effectors: customizable proteins for DNA targeting. Science 2011; 333(6051):1843-6.
    • (2011) Science , vol.333 , Issue.6051 , pp. 1843-1846
    • Bogdanove, A.J.1    Voytas, D.F.2
  • 6
    • 84877782609 scopus 로고
    • Compact designer TALENs for efficient genome engineering
    • Beurdeley M, Bietz F, Li J, et al. Compact designer TALENs for efficient genome engineering. Nat Commun 2013; 4:1762.
    • (1762) Nat Commun , vol.2013 , pp. 4
    • Beurdeley, M.1    Bietz, F.2    Li, J.3
  • 7
    • 79960064013 scopus 로고    scopus 로고
    • Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
    • Cermak T, Doyle EL, Christian M, et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res 2011; 39(12):e82.
    • (2011) Nucleic Acids Res , vol.39 , Issue.12
    • Cermak, T.1    Doyle, E.L.2    Christian, M.3
  • 8
    • 84875618956 scopus 로고    scopus 로고
    • Efficient TALEN construction and evaluation methods for human cell and animal applications
    • Sakuma T, Hosoi S, Woltjen K, et al. Efficient TALEN construction and evaluation methods for human cell and animal applications. Genes Cells Devoted Mol Cell Mech 2013; 18(4):315-26.
    • (2013) Genes Cells Devoted Mol Cell Mech , vol.18 , Issue.4 , pp. 315-326
    • Sakuma, T.1    Hosoi, S.2    Woltjen, K.3
  • 9
    • 84866879789 scopus 로고    scopus 로고
    • Iterative capped assembly: Rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers
    • Briggs AW, Rios X, Chari R. Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers. Nucleic Acids Res 2012; 40(15):e117.
    • (2012) Nucleic Acids Res , vol.40 , Issue.15
    • Briggs, A.W.1    Rios, X.2    Chari, R.3
  • 10
    • 84934438162 scopus 로고    scopus 로고
    • TAL effector nuclease (TALEN) engineering
    • Li T, Yang B. TAL effector nuclease (TALEN) engineering. Methods Mol Biol 2013; 978:63-72.
    • (2013) Methods Mol Biol , vol.978 , pp. 63-72
    • Li, T.1    Yang, B.2
  • 11
    • 79960034141 scopus 로고    scopus 로고
    • Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes
    • Li T, Huang S, Zhao X, et al. Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes. Nucleic Acids Res 2011; 39(14):6315-25.
    • (2011) Nucleic Acids Res , vol.39 , Issue.14 , pp. 6315-6325
    • Li, T.1    Huang, S.2    Zhao, X.3
  • 12
    • 84864475122 scopus 로고    scopus 로고
    • TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: Tools for TAL effector design and target prediction
    • (Web Server issue
    • Doyle EL, Booher NJ, Standage DS, et al. TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction. Nucleic Acids Res 2012; 40(Web Server issue):W117-122.
    • (2012) Nucleic Acids Res , vol.40
    • Doyle, E.L.1    Booher, N.J.2    Standage, D.S.3
  • 13
    • 78951479577 scopus 로고    scopus 로고
    • Targeting DNA doublestrand breaks with TAL effector nucleases
    • Christian M, Cermak T, Doyle EL, et al. Targeting DNA doublestrand breaks with TAL effector nucleases. Genetics 2010; 186(2):757-61.
    • (2010) Genetics , vol.186 , Issue.2 , pp. 757-761
    • Christian, M.1    Cermak, T.2    Doyle, E.L.3
  • 14
    • 84872203111 scopus 로고    scopus 로고
    • A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes
    • Schmid-Burgk JL, Schmidt T, Kaiser V, Höning K, Hornung V. A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes. Nat Biotechnol 2013; 31(1):76-81.
    • (2013) Nat Biotechnol , vol.31 , Issue.1 , pp. 76-81
    • Schmid-Burgk, J.L.1    Schmidt, T.2    Kaiser, V.3    Höning, K.4    Hornung, V.5
  • 15
    • 80053039555 scopus 로고    scopus 로고
    • A Novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity
    • Mussolino C, Morbitzer R, Lütge F, Dannemann N, Lahaye T, Cathomen T. A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity. Nucleic Acids Res 2011; 39(21):9283-93.
    • (2011) Nucleic Acids Res , vol.39 , Issue.21 , pp. 9283-9293
    • Mussolino, C.1    Morbitzer, R.2    Lütge, F.3    Dannemann, N.4    Lahaye, T.5    Cathomen, T.6
  • 16
    • 79551685675 scopus 로고    scopus 로고
    • A TALE nuclease architecture for efficient genome editing
    • Miller JC, Tan S, Qiao G, et al. A TALE nuclease architecture for efficient genome editing. Nat Biotechnol 2011; 29(2):143-8.
    • (2011) Nat Biotechnol , vol.29 , Issue.2 , pp. 143-148
    • Miller, J.C.1    Tan, S.2    Qiao, G.3
  • 17
    • 84873493550 scopus 로고    scopus 로고
    • Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly
    • Reyon D, Khayter C, Regan MR, Joung JK, Sander JD. Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly. Curr Protoc Mol Biol 2012; Ch 12:Unit 12.15.
    • (2012) Curr Protoc Mol Biol , vol.12 , pp. 15
    • Reyon, D.1    Khayter, C.2    Regan, M.R.3    Joung, J.K.4    Sander, J.D.5
  • 20
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek M, Chylinski K, Fonfara I, Hauer M, Doudna JA, Charpentier E. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 2012; 337(6096):816-21.
    • (2012) Science , vol.337 , Issue.6096 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 21
    • 84874617789 scopus 로고    scopus 로고
    • Efficient genome editing in zebrafish using a CRISPR-Cas system
    • Hwang WY, Fu Y, Reyon D, et al. Efficient genome editing in zebrafish using a CRISPR-Cas system. Nat Biotechnol 2013; 31(3):227-9.
    • (2013) Nat Biotechnol , vol.31 , Issue.3 , pp. 227-229
    • Hwang, W.Y.1    Fu, Y.2    Reyon, D.3
  • 23
    • 84858659496 scopus 로고    scopus 로고
    • Mechanism of substrate selection by a highly specific CRISPR endoribonuclease
    • Sternberg SH, Haurwitz RE, Doudna JA. Mechanism of substrate selection by a highly specific CRISPR endoribonuclease. RNA 2012; 18(4):661-72.
    • (2012) RNA , vol.18 , Issue.4 , pp. 661-672
    • Sternberg, S.H.1    Haurwitz, R.E.2    Doudna, J.A.3
  • 24
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong L, Ran FA, Cox D, et al. Multiplex genome engineering using CRISPR/Cas systems. Science 2013; 339(6121):819-23.
    • (2013) Science , vol.339 , Issue.6121 , pp. 819-823
    • Cong, L.1    Ran, F.A.2    Cox, D.3
  • 25
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
    • Qi LS, Larson MH, Gilbert LA, et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 2013; 152(5):1173-83.
    • (2013) Cell , vol.152 , Issue.5 , pp. 1173-1183
    • Qi, L.S.1    Larson, M.H.2    Gilbert, L.A.3
  • 26
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang W, Bikard D, Cox D, Zhang F, Marraffini LA. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat Biotechnol 2013; 31(3):233-9.
    • (2013) Nat Biotechnol , vol.31 , Issue.3 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3    Zhang, F.4    Marraffini, L.A.5
  • 27
    • 84873734105 scopus 로고    scopus 로고
    • RNA-guided human genome engineering via Cas9
    • Mali P, Yang L, Esvelt KM, et al. RNA-guided human genome engineering via Cas9. Science 2013; 339(6121):823-6.
    • (2013) Science , vol.339 , Issue.6121 , pp. 823-826
    • Mali, P.1    Yang, L.2    Esvelt, K.M.3
  • 29
    • 84875832964 scopus 로고    scopus 로고
    • RNA-protein analysis using a conditional CRISPR nuclease
    • Lee HY, Haurwitz RE, Apffel A, et al. RNA-protein analysis using a conditional CRISPR nuclease. Proc Natl Acad Sci U S A 2013; 110(14):5416-21.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , Issue.14 , pp. 5416-5421
    • Lee, H.Y.1    Haurwitz, R.E.2    Apffel, A.3
  • 30
    • 77955088422 scopus 로고    scopus 로고
    • TAL effectors: Finding plant genes for disease and defense
    • Bogdanove AJ, Schornack S, Lahaye T. TAL effectors: finding plant genes for disease and defense. Curr Opin Plant Biol 2010; 13(4):394-401.
    • (2010) Curr Opin Plant Biol , vol.13 , Issue.4 , pp. 394-401
    • Bogdanove, A.J.1    Schornack, S.2    Lahaye, T.3
  • 31
    • 77956126894 scopus 로고    scopus 로고
    • Xanthomonas AvrBs3 family-type III effectors: Discovery and function
    • Boch J, Bonas U. Xanthomonas AvrBs3 family-type III effectors: discovery and function. Annu Rev Phytopathol 2010; 48:419-36.
    • (2010) Annu Rev Phytopathol , vol.48 , pp. 419-436
    • Boch, J.1    Bonas, U.2
  • 32
    • 33750097480 scopus 로고    scopus 로고
    • Subterfuge and manipulation: Type III effector proteins of phytopathogenic bacteria
    • Grant SR, Fisher EJ, Chang JH, Mole BM, Dangl JL. Subterfuge and manipulation: type III effector proteins of phytopathogenic bacteria. Annu Rev Microbiol 2006; 60:425-49.
    • (2006) Annu Rev Microbiol , vol.60 , pp. 425-449
    • Grant, S.R.1    Fisher, E.J.2    Chang, J.H.3    Mole, B.M.4    Dangl, J.L.5
  • 34
    • 4744364745 scopus 로고    scopus 로고
    • Type III secretion system effector proteins: Double agents in bacterial disease and plant defense
    • Alfano JR, Collmer A. Type III secretion system effector proteins: double agents in bacterial disease and plant defense. Annu Rev Phytopathol 2004; 42:385-414.
    • (2004) Annu Rev Phytopathol , vol.42 , pp. 385-414
    • Alfano, J.R.1    Collmer, A.2
  • 35
    • 72149110399 scopus 로고    scopus 로고
    • Breaking the code of DNA binding specificity of TAL-type III effectors
    • Boch J, Scholze H, Schornack S, et al. Breaking the code of DNA binding specificity of TAL-type III effectors. Science 2009; 326(5959):1509-12.
    • (2009) Science , vol.326 , Issue.5959 , pp. 1509-1512
    • Boch, J.1    Scholze, H.2    Schornack, S.3
  • 36
    • 70349146307 scopus 로고    scopus 로고
    • Detailed analysis of the DNA recognition motifs of the Xanthomonas type III effectors AvrBs3 and AvrBs3Deltarep16
    • Kay S, Hahn S, Marois E, Wieduwild R, Bonas U. Detailed analysis of the DNA recognition motifs of the Xanthomonas type III effectors AvrBs3 and AvrBs3Deltarep16. Plant J 2009; 59(6):859-71.
    • (2009) Plant J , vol.59 , Issue.6 , pp. 859-871
    • Kay, S.1    Hahn, S.2    Marois, E.3    Wieduwild, R.4    Bonas, U.5
  • 37
    • 0032145159 scopus 로고    scopus 로고
    • AvrXa10 contains an acidic transcriptional activation domain in the functionally conserved C terminus
    • Zhu W, Yang B, Chittoor JM, Johnson LB, White FF. AvrXa10 contains an acidic transcriptional activation domain in the functionally conserved C terminus. Mol Plant Microbe Interact 1998; 11(8):824-32.
    • (1998) Mol Plant Microbe Interact , vol.11 , Issue.8 , pp. 824-832
    • Zhu, W.1    Yang, B.2    Chittoor, J.M.3    Johnson, L.B.4    White, F.F.5
  • 38
    • 59849120374 scopus 로고    scopus 로고
    • How Xanthomonas type III effectors manipulate the host plant
    • Kay S, Bonas U. How Xanthomonas type III effectors manipulate the host plant. Curr Opin Microbiol 2009; 12(1):37-43.
    • (2009) Curr Opin Microbiol , vol.12 , Issue.1 , pp. 37-43
    • Kay, S.1    Bonas, U.2
  • 39
    • 0034927988 scopus 로고    scopus 로고
    • Eukaryotic features of the Xanthomonas type III effector AvrBs3: Protein domains involved in transcriptional activation and the interaction with nuclear import receptors from pepper
    • Szurek B, Marois E, Bonas U, Van den Ackerveken G. Eukaryotic features of the Xanthomonas type III effector AvrBs3: protein domains involved in transcriptional activation and the interaction with nuclear import receptors from pepper. Plant J 2001; 26(5):523-34.
    • (2001) Plant J , vol.26 , Issue.5 , pp. 523-534
    • Szurek, B.1    Marois, E.2    Bonas, U.3    van den Ackerveken, G.4
  • 40
    • 0035205750 scopus 로고    scopus 로고
    • Molecular secrets of bacterial type III effector proteins
    • Lahaye T, Bonas U. Molecular secrets of bacterial type III effector proteins. Trends Plant Sci 2001; 6(10):479-85.
    • (2001) Trends Plant Sci , vol.6 , Issue.10 , pp. 479-485
    • Lahaye, T.1    Bonas, U.2
  • 41
    • 0024690540 scopus 로고
    • Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomonas campestris pv. vesicatoria
    • Bonas U, Stall RE, Staskawicz B. Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomonas campestris pv. vesicatoria. Mol Gen Genet 1989; 218(1):127-36.
    • (1989) Mol Gen Genet , vol.218 , Issue.1 , pp. 127-136
    • Bonas, U.1    Stall, R.E.2    Staskawicz, B.3
  • 42
    • 0000776265 scopus 로고
    • Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein
    • Herbers K, Conrads-Strauch J, Bonas U. Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein. Nature 1992; 356(6365):172-4.
    • (1992) Nature , vol.356 , Issue.6365 , pp. 172-174
    • Herbers, K.1    Conrads-Strauch, J.2    Bonas, U.3
  • 43
    • 72149090954 scopus 로고    scopus 로고
    • A simple cipher governs DNA recognition by TAL effectors
    • Moscou MJ, Bogdanove AJ. A simple cipher governs DNA recognition by TAL effectors. Science 2009; 326(5959):1501.
    • (2009) Science , vol.326 , Issue.5959 , pp. 1501
    • Moscou, M.J.1    Bogdanove, A.J.2
  • 44
    • 84857032466 scopus 로고    scopus 로고
    • Structural basis for sequence-specific recognition of DNA by TAL effectors
    • Deng D, Yan C, Pan X, et al. Structural basis for sequence-specific recognition of DNA by TAL effectors. Science 2012; 335(6069):720-3.
    • (2012) Science , vol.335 , Issue.6069 , pp. 720-723
    • Deng, D.1    Yan, C.2    Pan, X.3
  • 46
    • 84870583046 scopus 로고    scopus 로고
    • Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region
    • Gao H, Wu X, Chai J, Han Z. Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region. Cell Res 2012; 22(12):1716-20.
    • (2012) Cell Res , vol.22 , Issue.12 , pp. 1716-1720
    • Gao, H.1    Wu, X.2    Chai, J.3    Han, Z.4
  • 47
    • 84876009936 scopus 로고    scopus 로고
    • Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites
    • Grau J, Wolf A, Reschke M, Bonas U, Posch S, Boch J. Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites. Plos Comput Biol 2013; 9(3):e1002962.
    • (2013) Plos Comput Biol , vol.9 , Issue.3
    • Grau, J.1    Wolf, A.2    Reschke, M.3    Bonas, U.4    Posch, S.5    Boch, J.6
  • 48
    • 78349278103 scopus 로고    scopus 로고
    • TAL effector-DNA specificity
    • Scholze H, Boch J. TAL effector-DNA specificity. Virulence 2010; 1(5):428-32.
    • (2010) Virulence , vol.1 , Issue.5 , pp. 428-432
    • Scholze, H.1    Boch, J.2
  • 49
  • 50
    • 84869046680 scopus 로고    scopus 로고
    • Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation
    • Valton J, Dupuy A, Daboussi F, et al. Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation. J Biol Chem 2012; 287(46):38427-32.
    • (2012) J Biol Chem , vol.287 , Issue.46 , pp. 38427-38432
    • Valton, J.1    Dupuy, A.2    Daboussi, F.3
  • 51
    • 73949106226 scopus 로고    scopus 로고
    • A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens
    • Römer P, Recht S, Lahaye T. A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens. Proc Natl Acad Sci U S A 2009; 106(48):20526-31.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , Issue.48 , pp. 20526-20531
    • Römer, P.1    Recht, S.2    Lahaye, T.3
  • 52
    • 84871519181 scopus 로고    scopus 로고
    • TALENs: A widely applicable technology for targeted genome editing
    • Joung JK, Sander JD. TALENs: a widely applicable technology for targeted genome editing. Nat Rev Mol Cell Biol 2013; 14(1):49-55.
    • (2013) Nat Rev Mol Cell Biol , vol.14 , Issue.1 , pp. 49-55
    • Joung, J.K.1    Sander, J.D.2
  • 53
    • 84865513069 scopus 로고    scopus 로고
    • TALE nucleases: Tailored genome engineering made easy
    • Mussolino C, Cathomen T. TALE nucleases: tailored genome engineering made easy. Curr Opin Biotechnol 2012; 23(5):644-50.
    • (2012) Curr Opin Biotechnol , vol.23 , Issue.5 , pp. 644-650
    • Mussolino, C.1    Cathomen, T.2
  • 54
    • 84880287458 scopus 로고    scopus 로고
    • Characterization and DNA-Binding Specificities of Ralstonia TAL-like Effectors
    • [Epub ahead of print]
    • Li L, Atef A, Piatek A, et al. Characterization and DNA-Binding Specificities of Ralstonia TAL-like Effectors, Mol Plant 2013; [Epub ahead of print].
    • (2013) Mol Plant
    • Li, L.1    Atef, A.2    Piatek, A.3
  • 55
    • 69949117277 scopus 로고    scopus 로고
    • Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products
    • Mukaihara T, Tamura N. Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products. Microbiol Read Engl 2009; 155(Pt 7):2235-44.
    • (2009) Microbiol Read Engl , vol.155 , Issue.PART. 7 , pp. 2235-2244
    • Mukaihara, T.1    Tamura, N.2
  • 56
    • 78651270582 scopus 로고    scopus 로고
    • TAL nucleases (TALNs): Hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain
    • Li T, Huang S, Jiang WZ, et al. TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain. Nucleic Acids Res 2011; 39(1):359-72.
    • (2011) Nucleic Acids Res , vol.39 , Issue.1 , pp. 359-372
    • Li, T.1    Huang, S.2    Jiang, W.Z.3
  • 57
    • 84873733109 scopus 로고    scopus 로고
    • A TALEN genome-editing system for generating human stem cell-based disease models
    • Ding Q, Lee Y-K, Schaefer EAK, et al. A TALEN genome-editing system for generating human stem cell-based disease models. Cell Stem Cell 2013; 12(2):238-51.
    • (2013) Cell Stem Cell , vol.12 , Issue.2 , pp. 238-251
    • Ding, Q.1    Lee, Y.-K.2    Schaefer, E.A.K.3
  • 58
    • 78650912707 scopus 로고    scopus 로고
    • Enhancing zinc-fingernuclease activity with improved obligate heterodimeric architectures
    • Doyon Y, Vo TD, Mendel MC, et al. Enhancing zinc-fingernuclease activity with improved obligate heterodimeric architectures. Nat Methods 2011; 8(1):74-9.
    • (2011) Nat Methods , vol.8 , Issue.1 , pp. 74-79
    • Doyon, Y.1    Vo, T.D.2    Mendel, M.C.3
  • 60
    • 0034940222 scopus 로고    scopus 로고
    • Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites
    • Edgell DR, Shub DA. Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites. Proc Natl Acad Sci U S A 2001; 98(14):7898-903.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , Issue.14 , pp. 7898-7903
    • Edgell, D.R.1    Shub, D.A.2
  • 63
    • 78650432023 scopus 로고    scopus 로고
    • The I-CreI meganuclease and its engineered derivatives: Applications from cell modification to gene therapy
    • Arnould S, Delenda C, Grizot S, et al. The I-CreI meganuclease and its engineered derivatives: applications from cell modification to gene therapy. Protein Eng Des Sel Peds 2011; 24(1-2):27-31.
    • (2011) Protein Eng Des Sel Peds , vol.24 , Issue.1-2 , pp. 27-31
    • Arnould, S.1    Delenda, C.2    Grizot, S.3
  • 64
    • 33847246298 scopus 로고    scopus 로고
    • Meganucleases and DNA double-strand break-induced recombination: Perspectives for gene therapy
    • Pâques F, Duchateau P. Meganucleases and DNA double-strand break-induced recombination: perspectives for gene therapy. Curr Gene Ther 2007; 7(1):49-66.
    • (2007) Curr Gene Ther , vol.7 , Issue.1 , pp. 49-66
    • Pâques, F.1    Duchateau, P.2
  • 65
    • 84865240239 scopus 로고    scopus 로고
    • Engineering domain fusion chimeras from I-OnuI family LAGLIDADG homing endonucleases
    • Baxter S, Lambert AR, Kuhar R, et al. Engineering domain fusion chimeras from I-OnuI family LAGLIDADG homing endonucleases. Nucleic Acids Res 2012; 40(16):7985-8000.
    • (2012) Nucleic Acids Res , vol.40 , Issue.16 , pp. 7985-8000
    • Baxter, S.1    Lambert, A.R.2    Kuhar, R.3
  • 67
    • 78651240053 scopus 로고    scopus 로고
    • Homing endonucleases: From microbial genetic invaders to reagents for targeted DNA modification
    • Stoddard BL. Homing endonucleases: from microbial genetic invaders to reagents for targeted DNA modification. Structure 2011; 19(1):7-15.
    • (2011) Structure , vol.19 , Issue.1 , pp. 7-15
    • Stoddard, B.L.1
  • 68
    • 80051964399 scopus 로고    scopus 로고
    • Tapping natural reservoirs of homing endonucleases for targeted gene modification
    • Takeuchi R, Lambert AR, Mak AN-S. Tapping natural reservoirs of homing endonucleases for targeted gene modification. Proc Natl Acad Sci U S A 2011; 108(32):13077-82.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , Issue.32 , pp. 13077-13082
    • Takeuchi, R.1    Lambert, A.R.2    Mak, A.N.-S.3
  • 69
    • 33845914020 scopus 로고    scopus 로고
    • A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
    • Smith J, Grizot S, Arnould S, et al. A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences. Nucleic Acids Res 2006; 34(22):e149.
    • (2006) Nucleic Acids Res , vol.34 , Issue.22
    • Smith, J.1    Grizot, S.2    Arnould, S.3
  • 70
    • 70350635776 scopus 로고    scopus 로고
    • Exploitation of binding energy for catalysis and design
    • Thyme SB, Jarjour J, Takeuchi R, et al. Exploitation of binding energy for catalysis and design. Nature 2009; 461(7268):1300-4.
    • (2009) Nature , vol.461 , Issue.7268 , pp. 1300-1304
    • Thyme, S.B.1    Jarjour, J.2    Takeuchi, R.3
  • 71
    • 84934442376 scopus 로고    scopus 로고
    • Flow cytometric assays for interrogating LAGLIDADG homing endonuclease DNA-binding and cleavage properties
    • Baxter SK, Lambert AR, Scharenberg AM, Jarjour J. Flow cytometric assays for interrogating LAGLIDADG homing endonuclease DNA-binding and cleavage properties. Methods Mol Biol 2013; 978:45-61.
    • (2013) Methods Mol Biol , vol.978 , pp. 45-61
    • Baxter, S.K.1    Lambert, A.R.2    Scharenberg, A.M.3    Jarjour, J.4
  • 72
    • 63349094041 scopus 로고    scopus 로고
    • Optimization of in vivo activity of a bifunctional homing endonuclease and maturase reverses evolutionary degradation
    • Takeuchi R, Certo M, Caprara MG, Scharenberg AM, Stoddard BL. Optimization of in vivo activity of a bifunctional homing endonuclease and maturase reverses evolutionary degradation. Nucleic Acids Res 2009; 37(3):877-90.
    • (2009) Nucleic Acids Res , vol.37 , Issue.3 , pp. 877-890
    • Takeuchi, R.1    Certo, M.2    Caprara, M.G.3    Scharenberg, A.M.4    Stoddard, B.L.5
  • 73
    • 77957242130 scopus 로고    scopus 로고
    • Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation
    • Anderson BR, Muramatsu H, Nallagatla SR, et al. Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation. Nucleic Acids Res 2010; 38(17):5884-92.
    • (2010) Nucleic Acids Res , vol.38 , Issue.17 , pp. 5884-5892
    • Anderson, B.R.1    Muramatsu, H.2    Nallagatla, S.R.3
  • 74
    • 77952728325 scopus 로고    scopus 로고
    • Differential effects of nucleotide analogs on scanning-dependent initiation and elongation of mammalian mRNA translation in vitro
    • Aspden JL, Jackson RJ. Differential effects of nucleotide analogs on scanning-dependent initiation and elongation of mammalian mRNA translation in vitro. RNA 2010;16(6):1130-7.
    • (2010) RNA , vol.16 , Issue.6 , pp. 1130-1137
    • Aspden, J.L.1    Jackson, R.J.2
  • 75
    • 84876389220 scopus 로고    scopus 로고
    • Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells
    • Holkers M, Maggio I, Liu J, et al. Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells. Nucleic Acids Res 2013; 41(5):e63.
    • (2013) Nucleic Acids Res , vol.41 , Issue.5
    • Holkers, M.1    Maggio, I.2    Liu, J.3
  • 76
    • 78649336706 scopus 로고    scopus 로고
    • The DNA damage response: Making it safe to play with knives
    • Ciccia A, Elledge SJ. The DNA damage response: making it safe to play with knives. Mol Cell 2010; 40(2):179-204.
    • (2010) Mol Cell , vol.40 , Issue.2 , pp. 179-204
    • Ciccia, A.1    Elledge, S.J.2
  • 77
    • 84867061435 scopus 로고    scopus 로고
    • Coupling endonucleases with DNA end-processing enzymes to drive gene disruption
    • Certo MT, Gwiazda KS, Kuhar R, et al. Coupling endonucleases with DNA end-processing enzymes to drive gene disruption. Nat Methods 2012; 9(10):973-5.
    • (2012) Nat Methods , vol.9 , Issue.10 , pp. 973-975
    • Certo, M.T.1    Gwiazda, K.S.2    Kuhar, R.3
  • 78
    • 84872862315 scopus 로고    scopus 로고
    • High frequency targeted mutagenesis using engineered endonucleases and DNA-end processing enzymes
    • Delacôte F, Perez C, Guyot V, et al. High frequency targeted mutagenesis using engineered endonucleases and DNA-end processing enzymes. Plos One 2013; 8(1):e53217.
    • (2013) Plos One , vol.8 , Issue.1
    • Delacôte, F.1    Perez, C.2    Guyot, V.3
  • 79
    • 80755187806 scopus 로고    scopus 로고
    • Double-strand break end resection and repair pathway choice
    • Symington LS, Gautier J. Double-strand break end resection and repair pathway choice. Annu Rev Genet 2011; 45:247-71.
    • (2011) Annu Rev Genet , vol.45 , pp. 247-271
    • Symington, L.S.1    Gautier, J.2
  • 80
    • 70350504453 scopus 로고    scopus 로고
    • The DNA-damage response in human biology and disease
    • Jackson SP, Bartek J. The DNA-damage response in human biology and disease. Nature 2009; 461(7267):1071-8.
    • (2009) Nature , vol.461 , Issue.7267 , pp. 1071-1078
    • Jackson, S.P.1    Bartek, J.2
  • 81
    • 84865620494 scopus 로고    scopus 로고
    • Recognition, signaling, and repair of DNA doublestrand breaks produced by ionizing radiation in mammalian cells: The molecular choreography
    • Thompson LH. Recognition, signaling, and repair of DNA doublestrand breaks produced by ionizing radiation in mammalian cells: the molecular choreography. Mutat Res 2012; 751(2):158-246.
    • (2012) Mutat Res , vol.751 , Issue.2 , pp. 158-246
    • Thompson, L.H.1
  • 82
    • 79952762235 scopus 로고    scopus 로고
    • Factors determining DNA double-strand break repair pathway choice in G2 phase
    • Shibata A, Conrad S, Birraux J, et al. Factors determining DNA double-strand break repair pathway choice in G2 phase. EMBO J 2011; 30(6):1079-92.
    • (2011) EMBO J , vol.30 , Issue.6 , pp. 1079-1092
    • Shibata, A.1    Conrad, S.2    Birraux, J.3
  • 83
    • 46949095221 scopus 로고    scopus 로고
    • Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases
    • Perez EE, Wang J, Miller JC, et al. Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases. Nat Biotechnol 2008; 26(7):808-16.
    • (2008) Nat Biotechnol , vol.26 , Issue.7 , pp. 808-816
    • Perez, E.E.1    Wang, J.2    Miller, J.C.3
  • 84
    • 78650735673 scopus 로고    scopus 로고
    • Human hematopoietic stem/progenitor cells modified by zinc-finger nucleases targeted to CCR5 control HIV-1 in vivo
    • Holt N, Wang J, Kim K, et al. Human hematopoietic stem/progenitor cells modified by zinc-finger nucleases targeted to CCR5 control HIV-1 in vivo. Nat Biotechnol 2010; 28(8):839-47.
    • (2010) Nat Biotechnol , vol.28 , Issue.8 , pp. 839-847
    • Holt, N.1    Wang, J.2    Kim, K.3
  • 85
    • 84862496486 scopus 로고    scopus 로고
    • A foundation for universal T-cell based immunotherapy: T cells engineered to express a CD19specific chimeric-antigen-receptor and eliminate expression of endogenous TCR
    • Torikai H, Reik A, Liu P-Q, et al. A foundation for universal T-cell based immunotherapy: T cells engineered to express a CD19specific chimeric-antigen-receptor and eliminate expression of endogenous TCR. Blood 2012; 119(24):5697-705.
    • (2012) Blood , vol.119 , Issue.24 , pp. 5697-5705
    • Torikai, H.1    Reik, A.2    Liu, P.-Q.3
  • 86
    • 79960978444 scopus 로고    scopus 로고
    • Tracking genome engineering outcome at individual DNA breakpoints
    • Certo MT, Ryu BY, Annis JE, et al. Tracking genome engineering outcome at individual DNA breakpoints. Nat Methods 2011; 8(8):671-6.
    • (2011) Nat Methods , vol.8 , Issue.8 , pp. 671-676
    • Certo, M.T.1    Ryu, B.Y.2    Annis, J.E.3
  • 87
    • 77953023690 scopus 로고    scopus 로고
    • Transient cold shock enhances zinc-finger nuclease-mediated gene disruption
    • Doyon Y, Choi VM, Xia DF, Vo TD, Gregory PD, Holmes MC. Transient cold shock enhances zinc-finger nuclease-mediated gene disruption. Nat Methods 2010; 7(6):459-60.
    • (2010) Nat Methods , vol.7 , Issue.6 , pp. 459-460
    • Doyon, Y.1    Choi, V.M.2    Xia, D.F.3    Vo, T.D.4    Gregory, P.D.5    Holmes, M.C.6
  • 88
    • 73349098442 scopus 로고    scopus 로고
    • Limiting the persistence of a chromosome break diminishes its mutagenic potential
    • Bennardo N, Gunn A, Cheng A, Hasty P, Stark JM. Limiting the persistence of a chromosome break diminishes its mutagenic potential. Plos Genet 2009; 5(10):e1000683.
    • (2009) Plos Genet , vol.5 , Issue.10
    • Bennardo, N.1    Gunn, A.2    Cheng, A.3    Hasty, P.4    Stark, J.M.5
  • 89
    • 79959814259 scopus 로고    scopus 로고
    • DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation
    • Simsek D, Brunet E, Wong SY-W, et al. DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation. Plos Genet 2011; 7(6):e1002080.
    • (2011) Plos Genet , vol.7 , Issue.6
    • Simsek, D.1    Brunet, E.2    Wong, S.Y.-W.3
  • 90
    • 84863116082 scopus 로고    scopus 로고
    • Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1
    • Boboila C, Oksenych V, Gostissa M, et al. Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1). Proc Natl Acad Sci U S A 2012; 109(7):2473-8.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , Issue.7 , pp. 2473-2478
    • Boboila, C.1    Oksenych, V.2    Gostissa, M.3
  • 91
    • 84862745388 scopus 로고    scopus 로고
    • Chromosomal context and epigenetic mechanisms control the efficacy of genome editing by rare-cutting designer endonucleases
    • Daboussi F, Zaslavskiy M, Poirot L, et al. Chromosomal context and epigenetic mechanisms control the efficacy of genome editing by rare-cutting designer endonucleases. Nucleic Acids Res 2012; 40(13):6367-79.
    • (2012) Nucleic Acids Res , vol.40 , Issue.13 , pp. 6367-6379
    • Daboussi, F.1    Zaslavskiy, M.2    Poirot, L.3
  • 92
    • 82355183141 scopus 로고    scopus 로고
    • Zinc-finger nucleases-based genome engineering to generate isogenic human cell lines
    • Dreyer A-K, Cathomen T. Zinc-finger nucleases-based genome engineering to generate isogenic human cell lines. Methods Mol Biol 2012; 813:145-56.
    • (2012) Methods Mol Biol , vol.813 , pp. 145-156
    • Dreyer, A.-K.1    Cathomen, T.2
  • 93
    • 33750969980 scopus 로고    scopus 로고
    • Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break
    • Radecke F, Peter I, Radecke S, Gellhaus K, Schwarz K, Cathomen T. Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break. Mol Ther 2006; 14(6):798-808.
    • (2006) Mol Ther , vol.14 , Issue.6 , pp. 798-808
    • Radecke, F.1    Peter, I.2    Radecke, S.3    Gellhaus, K.4    Schwarz, K.5    Cathomen, T.6
  • 94
    • 80052292973 scopus 로고    scopus 로고
    • High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases
    • Chen F, Pruett-Miller SM, Huang Y, et al. High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases. Nat Methods 2011; 8(9):753-5.
    • (2011) Nat Methods , vol.8 , Issue.9 , pp. 753-755
    • Chen, F.1    Pruett-Miller, S.M.2    Huang, Y.3
  • 95
    • 77950521498 scopus 로고    scopus 로고
    • Zinc-finger nuclease-induced gene repair with oligodeoxynucleotides: Wanted and unwanted target locus modifications
    • Radecke S, Radecke F, Cathomen T, Schwarz K. Zinc-finger nuclease-induced gene repair with oligodeoxynucleotides: wanted and unwanted target locus modifications. Mol Ther 2010; 18(4):743-53.
    • (2010) Mol Ther , vol.18 , Issue.4 , pp. 743-753
    • Radecke, S.1    Radecke, F.2    Cathomen, T.3    Schwarz, K.4
  • 96
    • 38349145553 scopus 로고    scopus 로고
    • Importance of the cell cycle phase for the choice of the appropriate DSB repair pathway, for genome stability maintenance: The trans-S double-strand break repair model
    • Delacôte F, Lopez BS. Importance of the cell cycle phase for the choice of the appropriate DSB repair pathway, for genome stability maintenance: the trans-S double-strand break repair model. Cell Cycle 2008; 7(1):33-8.
    • (2008) Cell Cycle , vol.7 , Issue.1 , pp. 33-38
    • Delacôte, F.1    Lopez, B.S.2
  • 97
    • 84860137732 scopus 로고    scopus 로고
    • Identification of genes regulating gene targeting by a high-throughput screening approach
    • Delacôte F, Perez C, Guyot V, et al. Identification of genes regulating gene targeting by a high-throughput screening approach. J Nucleic Acids 2011; 2011:947212.
    • (2011) J Nucleic Acids , vol.2011 , pp. 947212
    • Delacôte, F.1    Perez, C.2    Guyot, V.3
  • 98
    • 0347988236 scopus 로고    scopus 로고
    • Dynamics of DNA doublestrand breaks revealed by clustering of damaged chromosome domains
    • Aten JA, Stap J, Krawczyk PM, et al. Dynamics of DNA doublestrand breaks revealed by clustering of damaged chromosome domains. Science 2004; 303(5654):92-5.
    • (2004) Science , vol.303 , Issue.5654 , pp. 92-95
    • Aten, J.A.1    Stap, J.2    Krawczyk, P.M.3
  • 99
    • 41549083291 scopus 로고    scopus 로고
    • Current topics in DNA double-strand break repair
    • Kobayashi J, Iwabuchi K, Miyagawa K, et al. Current topics in DNA double-strand break repair. J Radiat Res 2008; 49(2):93-103.
    • (2008) J Radiat Res , vol.49 , Issue.2 , pp. 93-103
    • Kobayashi, J.1    Iwabuchi, K.2    Miyagawa, K.3
  • 100
    • 33747889217 scopus 로고    scopus 로고
    • Differential usage of non-homologous end-joining and homologous recombination in double strand break repair
    • Sonoda E, Hochegger H, Saberi A, Taniguchi Y, Takeda S. Differential usage of non-homologous end-joining and homologous recombination in double strand break repair. DNA Repair 2006; 5(9/10):1021-9.
    • (2006) DNA Repair , vol.5 , Issue.9-10 , pp. 1021-1029
    • Sonoda, E.1    Hochegger, H.2    Saberi, A.3    Taniguchi, Y.4    Takeda, S.5
  • 101
    • 0042632901 scopus 로고    scopus 로고
    • Pathways of DNA double-strand break repair during the mammalian cell cycle
    • Rothkamm K, Krüger I, Thompson LH, Löbrich M. Pathways of DNA double-strand break repair during the mammalian cell cycle. Mol Cell Biol 2003; 23(16):5706-15.
    • (2003) Mol Cell Biol , vol.23 , Issue.16 , pp. 5706-5715
    • Rothkamm, K.1    Krüger, I.2    Thompson, L.H.3    Löbrich, M.4


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