메뉴 건너뛰기




Volumn 39, Issue 14, 2011, Pages 6315-6325

Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEASE; TAL EFFECTOR NUCLEASE; UNCLASSIFIED DRUG;

EID: 79960034141     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr188     Document Type: Article
Times cited : (349)

References (44)
  • 1
    • 45749145124 scopus 로고    scopus 로고
    • Zinc-finger nucleases: The next generation emerges
    • DOI 10.1038/mt.2008.114, PII MT2008114
    • Cathomen, T. and Joung, J.K. (2008) Zinc-finger nucleases: The next generation emerges. Mol. Ther., 16, 1200-1207. (Pubitemid 351866050)
    • (2008) Molecular Therapy , vol.16 , Issue.7 , pp. 1200-1207
    • Cathomen, T.1    Keith Joung, J.2
  • 2
    • 55549129245 scopus 로고    scopus 로고
    • Progress and prospects: Zinc-finger nucleases as gene therapy agents
    • Carroll, D. (2008) Progress and prospects: Zinc-finger nucleases as gene therapy agents. Gene Ther., 15, 1463-1468.
    • (2008) Gene Ther. , vol.15 , pp. 1463-1468
    • Carroll, D.1
  • 4
    • 0029899891 scopus 로고    scopus 로고
    • Genetic manipulation of genomes with rare-cutting endonucleases
    • DOI 10.1016/0168-9525(96)10019-6
    • Jasin, M. (1996) Genetic manipulation of genomes with rare-cutting endonucleases. Trends Genet., 12, 224-228. (Pubitemid 26163011)
    • (1996) Trends in Genetics , vol.12 , Issue.6 , pp. 224-228
    • Jasin, M.1
  • 6
    • 0037510038 scopus 로고    scopus 로고
    • Enhancing gene targeting with designed zinc finger nucleases
    • DOI 10.1126/science.1079512
    • Bibikova, M., Beumer, K., Trautman, J.K. and Carroll, D. (2003) Enhancing gene targeting with designed zinc finger nucleases. Science, 300, 764. (Pubitemid 36532104)
    • (2003) Science , vol.300 , Issue.5620 , pp. 764
    • Bibikova, M.1    Beumer, K.2    Trautman, J.K.3    Carroll, D.4
  • 8
    • 77449139581 scopus 로고    scopus 로고
    • Genome editing with modularly assembled zinc-finger nucleases
    • Kim, J.S., Lee, H.J. and Carroll, D. (2010) Genome editing with modularly assembled zinc-finger nucleases. Nat. Methods, 7, 91-92.
    • (2010) Nat. Methods , vol.7 , pp. 91-92
    • Kim, J.S.1    Lee, H.J.2    Carroll, D.3
  • 10
    • 77956126894 scopus 로고    scopus 로고
    • Xanthomonas AvrBs3 family-type III effectors: Discovery and function
    • Boch, J. and Bonas, U. (2010) Xanthomonas AvrBs3 family-type III effectors: Discovery and function. Annu. Rev. Phytopathol., 48, 419-436.
    • (2010) Annu. Rev. Phytopathol. , vol.48 , pp. 419-436
    • Boch, J.1    Bonas, U.2
  • 12
    • 77955088422 scopus 로고    scopus 로고
    • TAL effectors: Finding plant genes for disease and defense
    • Bogdanove, A.J., Schornack, S. and Lahaye, T. (2010) TAL effectors: Finding plant genes for disease and defense. Curr. Opin. Plant Biol., 13, 394-401.
    • (2010) Curr. Opin. Plant Biol. , vol.13 , pp. 394-401
    • Bogdanove, A.J.1    Schornack, S.2    Lahaye, T.3
  • 14
    • 72149090954 scopus 로고    scopus 로고
    • A simple cipher governs DNA recognition by TAL effectors
    • Moscou, M.J. and Bogdanove, A.J. (2009) A simple cipher governs DNA recognition by TAL effectors. Science, 326, 1501.
    • (2009) Science , vol.326 , pp. 1501
    • Moscou, M.J.1    Bogdanove, A.J.2
  • 15
    • 78650739853 scopus 로고    scopus 로고
    • Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors
    • Morbitzer, R., Romer, P., Boch, J. and Lahaye, T. (2010) Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors. Proc. Natl Acad. Sci. USA, 107, 21617-21622.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 21617-21622
    • Morbitzer, R.1    Romer, P.2    Boch, J.3    Lahaye, T.4
  • 16
    • 79751487297 scopus 로고    scopus 로고
    • Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription
    • Zhang, F., Cong, L., Lodato, S., Kosuri, S., Church, G.M. and Arlotta, P. (2011) Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription. Nat. Biotechnol., 29, 149-153.
    • (2011) Nat. Biotechnol. , vol.29 , pp. 149-153
    • Zhang, F.1    Cong, L.2    Lodato, S.3    Kosuri, S.4    Church, G.M.5    Arlotta, P.6
  • 18
    • 78651270582 scopus 로고    scopus 로고
    • TAL nucleases (TALNs): Hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain
    • Li, T., Huang, S., Jiang, W.Z., Wright, D., Spalding, M.H., Weeks, D.P. and Yang, B. (2010) TAL nucleases (TALNs): Hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain. Nucleic Acids Res., 39, 359-372.
    • (2010) Nucleic Acids Res. , vol.39 , pp. 359-372
    • Li, T.1    Huang, S.2    Jiang, W.Z.3    Wright, D.4    Spalding, M.H.5    Weeks, D.P.6    Yang, B.7
  • 19
    • 79952302385 scopus 로고    scopus 로고
    • De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
    • Mahfouz, M.M., Li, L., Shamimuzzaman, M., Wibowo, A., Fang, X. and Zhu, J.K. (2011) De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proc. Natl Acad. Sci. USA, 108, 2623-2628.
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 2623-2628
    • Mahfouz, M.M.1    Li, L.2    Shamimuzzaman, M.3    Wibowo, A.4    Fang, X.5    Zhu, J.K.6
  • 22
    • 0023484186 scopus 로고
    • 5-fluoroorotic acid as a selective agent in yeast molecular genetics
    • Boeke, J.D., Trueheart, J., Natsoulis, G. and Fink, G.R. (1987) 5-fluoroorotic acid as a selective agent in yeast molecular genetics. Methods Enzymol., 154, 164-175.
    • (1987) Methods Enzymol. , vol.154 , pp. 164-175
    • Boeke, J.D.1    Trueheart, J.2    Natsoulis, G.3    Fink, G.R.4
  • 23
    • 0018644036 scopus 로고
    • Selection of lys2 mutants of the yeast Saccharomyces cerevisiae by the utilization of α-aminoadipate
    • Chattoo, B.B., Sherman, F., Azubalis, D.A., Fjellstedt, T.A., Mehnert, D. and Ogur, M. (1979) Selection of lys2 mutants of the yeast Saccharomyces cerevisiae by the utilization of alpha-aminoadipate. Genetics, 93, 51-65. (Pubitemid 10154117)
    • (1979) Genetics , vol.93 , Issue.1 , pp. 51-65
    • Chattoo, B.B.1    Sherman, F.2    Azubalis, D.A.3
  • 24
    • 0030479854 scopus 로고    scopus 로고
    • The red/white colony color assay in the yeast Saccharomyces cerevisiae: Epistatic growth advantage of white ade8-18, ade2 cells over red ade2 cells
    • DOI 10.1007/s002940050160
    • Ugolini, S. and Bruschi, C.V. (1996) The red/white colony color assay in the yeast saccharomyces cerevisiae: Epistatic growth advantage of white ade8-18, ade2 cells over red ade2 cells. Curr. Genet., 30, 485-492. (Pubitemid 27029240)
    • (1996) Current Genetics , vol.30 , Issue.6 , pp. 485-492
    • Ugolini, S.1    Bruschi, C.V.2
  • 25
    • 0028953840 scopus 로고
    • Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
    • Mumberg, D., Muller, R. and Funk, M. (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene, 156, 119-122.
    • (1995) Gene , vol.156 , pp. 119-122
    • Mumberg, D.1    Muller, R.2    Funk, M.3
  • 26
    • 0021471049 scopus 로고
    • Sequences that regulate the divergent GAL1-GAL10 promoter in saccharomyces cerevisiae
    • Johnston, M. and Davis, R.W. (1984) Sequences that regulate the divergent GAL1-GAL10 promoter in saccharomyces cerevisiae. Mol. Cell. Biol., 4, 1440-1448.
    • (1984) Mol. Cell. Biol. , vol.4 , pp. 1440-1448
    • Johnston, M.1    Davis, R.W.2
  • 28
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with burrows-wheeler transform
    • Li, H. and Durbin, R. (2009) Fast and accurate short read alignment with burrows-wheeler transform. Bioinformatics, 25, 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 30
    • 3242892765 scopus 로고    scopus 로고
    • DSB repair: The yeast paradigm
    • DOI 10.1016/j.dnarep.2004.04.013, PII S1568786404001442
    • Aylon, Y. and Kupiec, M. (2004) DSB repair: The yeast paradigm. DNA Repair, 3, 797-815. (Pubitemid 38997923)
    • (2004) DNA Repair , vol.3 , Issue.8-9 , pp. 797-815
    • Aylon, Y.1    Kupiec, M.2
  • 33
    • 0038523969 scopus 로고    scopus 로고
    • Chimeric nucleases stimulate gene targeting in human cells
    • DOI 10.1126/science.1078395
    • Porteus, M.H. and Baltimore, D. (2003) Chimeric nucleases stimulate gene targeting in human cells. Science, 300, 763. (Pubitemid 36532103)
    • (2003) Science , vol.300 , Issue.5620 , pp. 763
    • Porteus, M.H.1    Baltimore, D.2
  • 35
    • 30344473645 scopus 로고    scopus 로고
    • Mammalian gene targeting with designed zinc finger nucleases
    • DOI 10.1016/j.ymthe.2005.08.003, PII S1525001605015558
    • Porteus, M.H. (2006) Mammalian gene targeting with designed zinc finger nucleases. Mol. Ther., 13, 438-446. (Pubitemid 43056910)
    • (2006) Molecular Therapy , vol.13 , Issue.2 , pp. 438-446
    • Porteus, M.H.1
  • 37
    • 34447323568 scopus 로고    scopus 로고
    • Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases
    • DOI 10.1038/nbt1317, PII NBT1317
    • Szczepek, M., Brondani, V., Buchel, J., Serrano, L., Segal, D.J. and Cathomen, T. (2007) Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases. Nat. Biotechnol., 25, 786-793. (Pubitemid 47052189)
    • (2007) Nature Biotechnology , vol.25 , Issue.7 , pp. 786-793
    • Szczepek, M.1    Brondani, V.2    Buchel, J.3    Serrano, L.4    Segal, D.J.5    Cathomen, T.6
  • 38
    • 38849103093 scopus 로고    scopus 로고
    • DNA-binding specificity is a major determinant of the activity and toxicity of zinc-finger nucleases
    • DOI 10.1038/sj.mt.6300357, PII 6300357
    • Cornu, T.I., Thibodeau-Beganny, S., Guhl, E., Alwin, S., Eichtinger, M., Joung, J.K. and Cathomen, T. (2008) DNA-binding specificity is a major determinant of the activity and toxicity of zinc-finger nucleases. Mol. Ther., 16, 352-358. (Pubitemid 351187464)
    • (2008) Molecular Therapy , vol.16 , Issue.2 , pp. 352-358
    • Cornu, T.I.1    Thibodeau-Beganny, S.2    Guhl, E.3    Alwin, S.4    Eichtinger, M.5    Joung, J.K.6    Cathomen, T.7
  • 39
    • 0036021389 scopus 로고    scopus 로고
    • Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases
    • Bibikova, M., Golic, M., Golic, K.G. and Carroll, D. (2002) Targeted chromosomal cleavage and mutagenesis in drosophila using zinc-finger nucleases. Genetics, 161, 1169-1175. (Pubitemid 34831440)
    • (2002) Genetics , vol.161 , Issue.3 , pp. 1169-1175
    • Bibikova, M.1    Golic, M.2    Golic, K.G.3    Carroll, D.4
  • 41
    • 33646182222 scopus 로고    scopus 로고
    • Efficient gene targeting in drosophila with zinc-finger nucleases
    • Beumer, K., Bhattacharyya, G., Bibikova, M., Trautman, J.K. and Carroll, D. (2006) Efficient gene targeting in drosophila with zinc-finger nucleases. Genetics, 172, 2391-2403.
    • (2006) Genetics , vol.172 , pp. 2391-2403
    • Beumer, K.1    Bhattacharyya, G.2    Bibikova, M.3    Trautman, J.K.4    Carroll, D.5
  • 42
    • 0037095730 scopus 로고    scopus 로고
    • DNAWorks: An automated method for designing oligonucleotides for PCR-based gene synthesis
    • Hoover, D.M. and Lubkowski, J. (2002) DNAWorks: an automated method for designing oligonucleotides for PCR-based gene synthesis. Nucleic Acids Res., 30, e43.
    • (2002) Nucleic Acids Res. , vol.30
    • Hoover, D.M.1    Lubkowski, J.2
  • 43
    • 0033551662 scopus 로고    scopus 로고
    • Efficient processing of DNA ends during yeast nonhomologous end joining Evidence for a DNA polymerase beta (Pol4)-dependent pathway
    • Wilson, T.E. and Lieber, M.R. (1999) Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathway. J. Biol. Chem., 274, 23599-23609.
    • (1999) J. Biol. Chem. , vol.274 , pp. 23599-23609
    • Wilson, T.E.1    Lieber, M.R.2
  • 44
    • 0029976325 scopus 로고    scopus 로고
    • Cell cycle and genetic requirements of two pathways of nonhomologous end-joining repair of double-strand breaks in saccharomyces cerevisiae
    • Moore, J.K. and Haber, J.E. (1996) Cell cycle and genetic requirements of two pathways of nonhomologous end-joining repair of double-strand breaks in saccharomyces cerevisiae. Mol. Cell. Biol., 16, 2164-2173.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 2164-2173
    • Moore, J.K.1    Haber, J.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.