Erratum: Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair crosscomplementing protein 1 (XRCC1) (Proceedings of the National Academy of Sciences of the United States of America (2012) 109:7 (2473-2478) DOI:10.1073/pnas.1121470109);Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1)

Proceedings of the National Academy of Sciences of the United States of America

Volumn 109, Issue 7, 2012, Pages 2473-2478

  Boboila, Cristian ^a,b,f   Oksenych, Valentyn ^a,b   Gostissa, Monica ^a,b   Wang, Jing H ^a,b,g   Zha, Shan ^a,b,h   Zhang, Yu ^a,b   Chai, Hua ^a,b   Lee, Cheng Sheng ^a,b   Jankovic, Mila ^c   Saez, Liz Marie Albertorio ^d   Nussenzweig, Michel C ^c   McKinnon, Peter J ^e   Alt, Frederick W ^a,b   Schwer, Bjoern ^a,b  

^a BOSTON CHILDREN S HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

^c ROCKEFELLER UNIVERSITY   (United States)

^d UNIVERSITY OF PUERTO RICO   (Puerto Rico)

^e ST JUDE CHILDREN S RESEARCH HOSPITAL   (United States)

^f Och Spine at New York Presbyterian Hospitals   (United States)

^g UNIVERSITY OF COLORADO SCHOOL OF MEDICINE   (United States)

^h NewYork Presbyterian Hospital   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EXTRACHROMOSOMAL DNA; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; XRCC1 PROTEIN; XRCC4 PROTEIN;

ANIMAL CELL; ANIMAL EXPERIMENT; ARTICLE; B LYMPHOCYTE; B LYMPHOCYTE ACTIVATION; CHROMOSOME TRANSLOCATION; DNA END JOINING REPAIR; DOUBLE STRANDED DNA BREAK; GENE DELETION; GENE REARRANGEMENT; GENE TARGETING; GENE TRANSLOCATION; MOUSE; NONHUMAN; PRIORITY JOURNAL;

MAMMALIA;

EID: 84863116082     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1303078110     Document Type: Erratum

References (53)

1. Lieber MR (2010) The mechanism of double-strand DNA break repair by the non-homologous DNA end-joining pathway. Annu Rev Biochem 79:181-211.
2. Zhang Y, et al. (2010) The role of mechanistic factors in promoting chromosomal translocations found in lymphoid and other cancers. Adv Immunol 106:93-133.
3. Haber JE (2008) Alternative endings. Proc Natl Acad Sci USA 105:405-406.
4. Zha S, Boboila C, Alt FW (2009) Mre11: Roles in DNA repair beyond homologous recombination. Nat Struct Mol Biol 16:798-800.
5. Boulton SJ, Jackson SP (1996) Saccharomyces cerevisiae Ku70 potentiates illegitimate DNA double-strand break repair and serves as a barrier to error-prone DNA repair pathways. EMBO J 15:5093-5103. (Pubitemid 26315820)
6. Kabotyanski EB, Gomelsky L, Han JO, Stamato TD, Roth DB (1998) Double-strand break repair in Ku86- and XRCC4-deficient cells. Nucleic Acids Res 26:5333-5342. (Pubitemid 28542732)
7. Roth DB (2002) Amplifying mechanisms of lymphomagenesis. Mol Cell 10:1-2.
8. Zhu C, et al. (2002) Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations. Cell 109:811-821. (Pubitemid 34785997)
9. Chaudhuri J, et al. (2007) Evolution of the immunoglobulin heavy chain class switch recombination mechanism. Adv Immunol 94:157-214. (Pubitemid 46856611)
10. Yan CT, et al. (2007) IgH class switching and translocations use a robust non-classical end-joining pathway. Nature 449:478-482. (Pubitemid 47509538)
11. Boboila C, et al. (2010) Alternative end-joining catalyzes class switch recombination in the absence of both Ku70 and DNA ligase 4. J Exp Med 207:417-427.
12. Guirouilh-Barbat J, et al. (2004) Impact of the KU80 pathway on NHEJ-induced genome rearrangements in mammalian cells. Mol Cell 14:611-623. (Pubitemid 38744575)
13. Guirouilh-Barbat J, Rass E, Plo I, Bertrand P, Lopez BS (2007) Defects in XRCC4 and KU80 differentially affect the joining of distal nonhomologous ends. Proc Natl Acad Sci USA 104:20902-20907.
14. McVey M, Lee SE (2008) MMEJ repair of double-strand breaks (director's cut): Deleted sequences and alternative endings. Trends Genet 24:529-538.
15. Boboila C, et al. (2010) Alternative end-joining catalyzes robust IgH locus deletions and translocations in the combined absence of ligase 4 and Ku70. Proc Natl Acad Sci USA 107:3034-3039.
16. Deriano L, Stracker TH, Baker A, Petrini JHJ, Roth DB (2009) Roles for NBS1 in alternative nonhomologous end-joining of V(D)J recombination intermediates. Mol Cell 34:13-25.
17. Dinkelmann M, et al. (2009) Multiple functions of MRN in end-joining pathways during isotype class switching. Nat Struct Mol Biol 16:808-813.
18. Rass E, et al. (2009) Role of Mre11 in chromosomal nonhomologous end joining in mammalian cells. Nat Struct Mol Biol 16:819-824.
19. Xie A, Kwok A, Scully R (2009) Role of mammalian Mre11 in classical and alternative nonhomologous end joining. Nat Struct Mol Biol 16:814-818.
20. Lee-Theilen M, Matthews AJ, Kelly D, Zheng S, Chaudhuri J (2011) CtIP promotes microhomology-mediated alternative end joining during class-switch recombination. Nat Struct Mol Biol 18:75-79.
21. Zhang Y, Jasin M (2011) An essential role for CtIP in chromosomal translocation formation through an alternative end-joining pathway. Nat Struct Mol Biol 18:80-84.
22. Simsek D, et al. (2011) DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation. PLoS Genet 7:e1002080.
23. Gostissa M, Alt FW, Chiarle R (2011) Mechanisms that promote and suppress chromosomal translocations in lymphocytes. Annu Rev Immunol 29:319-350.
24. Tomkinson AE, Vijayakumar S, Pascal JM, Ellenberger T (2006) DNA ligases: Structure, reaction mechanism, and function. Chem Rev 106:687-699.
25. Ellenberger T, Tomkinson AE (2008) Eukaryotic DNA ligases: Structural and functional insights. Annu Rev Biochem 77:313-338.
26. Caldecott KW (2003) XRCC1 and DNA strand break repair. DNA Repair (Amst) 2:955-969.
27. Lakshmipathy U, Campbell C (1999) The human DNA ligase III gene encodes nuclear and mitochondrial proteins. Mol Cell Biol 19:3869-3876. (Pubitemid 29193846)
28. Gao Y, et al. (2011) DNA ligase III is critical for mtDNA integrity but not Xrcc1-mediated nuclear DNA repair. Nature 471:240-244.
29. Simsek D, et al. (2011) Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair. Nature 471:245-248.
30. Audebert M, Salles B, Calsou P (2004) Involvement of poly(ADP-ribose) polymerase-1 and XRCC1/DNA ligase III in an alternative route for DNA double-strand breaks rejoining. J Biol Chem 279:55117-55126. (Pubitemid 40066505)
31. Della-Maria J, et al. (2011) Human Mre11/human Rad50/Nbs1 and DNA ligase IIIalpha/XRCC1 protein complexes act together in an alternative nonhomologous end joining pathway. J Biol Chem 286:33845-33853.
32. Liang L, et al. (2008) Human DNA ligases I and III, but not ligase IV, are required for microhomology-mediated end joining of DNA double-strand breaks. Nucleic Acids Res 36:3297-3310. (Pubitemid 351858999)
33. Wang H, et al. (2005) DNA ligase III as a candidate component of backup pathways of nonhomologous end joining. Cancer Res 65:4020-4030. (Pubitemid 40775638)
34. Tebbs RS, et al. (1999) Requirement for the Xrcc1 DNA base excision repair gene during early mouse development. Dev Biol 208:513-529. (Pubitemid 29184008)
35. Charbonnel C, Gallego ME, White CI (2010) Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants. Plant J 64:280-290.
36. Saribasak H, et al. (2011) XRCC1 suppresses somatic hypermutation and promotes alternative nonhomologous end joining in Igh genes. J Exp Med 208:2209-2216.
37. Lee Y, et al. (2009) The genesis of cerebellar interneurons and the prevention of neural DNA damage require XRCC1. Nat Neurosci 12:973-980.
38. Kraus M, Alimzhanov MB, Rajewsky N, Rajewsky K (2004) Survival of resting mature B lymphocytes depends on BCR signaling via the Igalpha/beta heterodimer. Cell 117:787-800. (Pubitemid 38748894)
39. Franco S, et al. (2008) DNA-PKcs and Artemis function in the end-joining phase of immunoglobulin heavy chain class switch recombination. J Exp Med 205:557-564. (Pubitemid 351439303)
40. Ramiro AR, et al. (2004) AID is required for c-myc/IgH chromosome translocations in vivo. Cell 118:431-438. (Pubitemid 39485663)
41. Wang JH, et al. (2009) Mechanisms promoting translocations in editing and switching peripheral B cells. Nature 460:231-236.
42. Chiarle R, et al. (2011) Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells. Cell 147:107-119.
43. Desiderio SV, et al. (1984) Insertion of N regions into heavy-chain genes is correlated with expression of terminal deoxytransferase in B cells. Nature 311:752-755. (Pubitemid 14008988)
44. Ciccia A, Elledge SJ (2010) The DNA damage response: Making it safe to play with knives. Mol Cell 40:179-204.
45. Mladenov E, Iliakis G (2011) Induction and repair of DNA double strand breaks: The increasing spectrum of non-homologous end joining pathways. Mutat Res 711(1-2):61-72.
46. Neal JA, Meek K (2011) Choosing the right path: Does DNA-PK help make the decision? Mutat Res 711(1-2):73-86.
47. Stavnezer J, Björkman A, Du L, Cagigi A, Pan-Hammarström Q (2010) Mapping of switch recombination junctions, a tool for studying DNA repair pathways during immunoglobulin class switching. Adv Immunol 108:45-109.
48. Han L, Yu K (2008) Altered kinetics of nonhomologous end joining and class switch recombination in ligase IV-deficient B cells. J Exp Med 205:2745-2753.
49. Li G, et al. (2008) Lymphocyte-specific compensation for XLF/cernunnos end-joining functions in V(D)J recombination. Mol Cell 31:631-640.
50. Zha S, Alt FW, Cheng HL, Brush JW, Li G (2007) Defective DNA repair and increased genomic instability in Cernunnos-XLF-deficient murine ES cells. Proc Natl Acad Sci USA 104:4518-4523. (Pubitemid 47186257)
51. Simsek D, Jasin M (2011) DNA ligase III: A spotty presence in eukaryotes, but an essential function where tested. Cell Cycle 10:3636-3644.
52. Cheng HL, et al. (2009) Integrity of the AID serine-38 phosphorylation site is critical for class switch recombination and somatic hypermutation in mice. Proc Natl Acad Sci USA 106:2717-2722.
53. Bredemeyer AL, et al. (2006) ATM stabilizes DNA double-strand-break complexes during V(D)J recombination. Nature 442:466-470. (Pubitemid 44264797)