메뉴 건너뛰기




Volumn 76, Issue 3, 2012, Pages 597-625

Culture history and population heterogeneity as determinants of bacterial adaptation: The adaptomics of a single environmental transition

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; SIGMA FACTOR RPOS; TRANSCRIPTION FACTOR;

EID: 84865766606     PISSN: 10922172     EISSN: 10985557     Source Type: Journal    
DOI: 10.1128/MMBR.05028-11     Document Type: Review
Times cited : (114)

References (381)
  • 1
    • 33751370456 scopus 로고    scopus 로고
    • Hypermutagenesis in mutA cells is mediated by mistranslational corruption of polymerase, and is accompanied by replication fork collapse
    • Al Mamun AA, Gautam S, Humayun MZ. 2006. Hypermutagenesis in mutA cells is mediated by mistranslational corruption of polymerase, and is accompanied by replication fork collapse. Mol. Microbiol. 62:1752-1763.
    • (2006) Mol. Microbiol. , vol.62 , pp. 1752-1763
    • Al Mamun, A.A.1    Gautam, S.2    Humayun, M.Z.3
  • 2
    • 2242462215 scopus 로고    scopus 로고
    • DNA polymerase III from Escherichia coli cells expressing mutA mistranslator tRNA is error-prone
    • Al Mamun AA, Marians KJ, Humayun MZ. 2002. DNA polymerase III from Escherichia coli cells expressing mutA mistranslator tRNA is error-prone. J. Biol. Chem. 277:46319-46327.
    • (2002) J. Biol. Chem. , vol.277 , pp. 46319-46327
    • Al Mamun, A.A.1    Marians, K.J.2    Humayun, M.Z.3
  • 3
    • 0032781253 scopus 로고    scopus 로고
    • Escherichia coli cells bearing mutA, a mutant glyV tRNA gene, express a recA-dependent error-prone DNA replication activity
    • Al Mamun AA, Rahman MS, Humayun MZ. 1999. Escherichia coli cells bearing mutA, a mutant glyV tRNA gene, express a recA-dependent error-prone DNA replication activity. Mol. Microbiol. 33:732-740.
    • (1999) Mol. Microbiol. , vol.33 , pp. 732-740
    • Al Mamun, A.A.1    Rahman, M.S.2    Humayun, M.Z.3
  • 4
    • 0019570557 scopus 로고
    • Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between ribosomal RNA (Rrn) cistrons
    • Anderson P, Roth J. 1981. Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between ribosomal RNA (Rrn) cistrons. Proc. Natl. Acad. Sci. U. S. A. 78:3113-3117.
    • (1981) Proc. Natl. Acad. Sci. U. S. A. , vol.78 , pp. 3113-3117
    • Anderson, P.1    Roth, J.2
  • 5
    • 70350195337 scopus 로고    scopus 로고
    • Gene amplification and adaptive evolution in bacteria
    • Andersson DI, Hughes D. 2009. Gene amplification and adaptive evolution in bacteria. Annu. Rev. Genet. 43:167-195.
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 167-195
    • Andersson, D.I.1    Hughes, D.2
  • 6
    • 0032491390 scopus 로고    scopus 로고
    • Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon
    • Andersson DI, Slechta ES, Roth JR. 1998. Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon. Science 282:1133-1135.
    • (1998) Science , vol.282 , pp. 1133-1135
    • Andersson, D.I.1    Slechta, E.S.2    Roth, J.R.3
  • 7
    • 23844471922 scopus 로고    scopus 로고
    • Contact-dependent inhibition of growth in Escherichia coli
    • Aoki SK, et al. 2005. Contact-dependent inhibition of growth in Escherichia coli. Science 309:1245-1248.
    • (2005) Science , vol.309 , pp. 1245-1248
    • Aoki, S.K.1
  • 8
    • 2042475439 scopus 로고    scopus 로고
    • Structural basis for transcription regulation by alarmone ppGpp
    • Artsimovitch I, et al. 2004. Structural basis for transcription regulation by alarmone ppGpp. Cell 117:299-310.
    • (2004) Cell , vol.117 , pp. 299-310
    • Artsimovitch, I.1
  • 9
    • 33747174575 scopus 로고    scopus 로고
    • Microbial cell individuality and the underlying sources of heterogeneity
    • Avery SV. 2006. Microbial cell individuality and the underlying sources of heterogeneity. Nat. Rev. Microbiol. 4:577-587.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 577-587
    • Avery, S.V.1
  • 13
    • 0027456978 scopus 로고
    • Multiple pathways of deletion formation in Escherichia coli
    • Balbinder E. 1993. Multiple pathways of deletion formation in Escherichia coli. Mutat. Res. 299:193-209.
    • (1993) Mutat. Res. , vol.299 , pp. 193-209
    • Balbinder, E.1
  • 14
    • 0035828138 scopus 로고    scopus 로고
    • Stationary phase deletions in Escherichia coli. I. Evidence for a new deletion pathway
    • Balbinder E. 2001. Stationary phase deletions in Escherichia coli. I. Evidence for a new deletion pathway. Mutat. Res. 479:19-36.
    • (2001) Mutat. Res. , vol.479 , pp. 19-36
    • Balbinder, E.1
  • 15
    • 57549107143 scopus 로고    scopus 로고
    • Regulation by transcription factors in bacteria: Beyond description
    • Balleza E, et al. 2009. Regulation by transcription factors in bacteria: beyond description. FEMS Microbiol. Rev. 33:133-151.
    • (2009) FEMS Microbiol. Rev. , vol.33 , pp. 133-151
    • Balleza, E.1
  • 16
    • 33646032683 scopus 로고    scopus 로고
    • Bacterially speaking
    • Bassler BL, Losick R. 2006. Bacterially speaking. Cell 125:237-246.
    • (2006) Cell , vol.125 , pp. 237-246
    • Bassler, B.L.1    Losick, R.2
  • 17
    • 80053226878 scopus 로고    scopus 로고
    • The RpoS-mediated general stress response in Escherichia coli
    • Battesti A, Majdalani N, Gottesman S. 2011. The RpoS-mediated general stress response in Escherichia coli. Annu. Rev. Microbiol. 65:189-213.
    • (2011) Annu. Rev. Microbiol. , vol.65 , pp. 189-213
    • Battesti, A.1    Majdalani, N.2    Gottesman, S.3
  • 18
    • 64349088719 scopus 로고    scopus 로고
    • Determinants of phase variation rate and the fitness implications of differing rates for bacterial pathogens and commensals
    • Bayliss CD. 2009. Determinants of phase variation rate and the fitness implications of differing rates for bacterial pathogens and commensals. FEMS Microbiol. Rev. 33:504-520.
    • (2009) FEMS Microbiol. Rev. , vol.33 , pp. 504-520
    • Bayliss, C.D.1
  • 19
    • 79955476606 scopus 로고    scopus 로고
    • Metabolic trade-offs and the maintenance of the fittest and the flattest
    • Beardmore RE, Gudelj I, Lipson DA, Hurst LD. 2011. Metabolic trade-offs and the maintenance of the fittest and the flattest. Nature 472:342-346.
    • (2011) Nature , vol.472 , pp. 342-346
    • Beardmore, R.E.1    Gudelj, I.2    Lipson, D.A.3    Hurst, L.D.4
  • 21
    • 0034212551 scopus 로고    scopus 로고
    • Engineering stability in gene networks by autoregulation
    • Becskei A, Serrano L. 2000. Engineering stability in gene networks by autoregulation. Nature 405:590-593.
    • (2000) Nature , vol.405 , pp. 590-593
    • Becskei, A.1    Serrano, L.2
  • 22
    • 82555179718 scopus 로고    scopus 로고
    • Optical sensors for measuring dynamic changes of cytosolic metabolite levels in yeast
    • Bermejo C, Haerizadeh F, Takanaga H, Chermak D, Frommer WB. 2011. Optical sensors for measuring dynamic changes of cytosolic metabolite levels in yeast. Nat. Protoc. 6:1806-1817.
    • (2011) Nat. Protoc. , vol.6 , pp. 1806-1817
    • Bermejo, C.1    Haerizadeh, F.2    Takanaga, H.3    Chermak, D.4    Frommer, W.B.5
  • 23
    • 34948909644 scopus 로고    scopus 로고
    • Correlation between growth rates, EIIA(Crr) phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12
    • Bettenbrock K, et al. 2007. Correlation between growth rates, EIIA(Crr) phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12. J. Bacteriol. 189:6891-6900.
    • (2007) J. Bacteriol. , vol.189 , pp. 6891-6900
    • Bettenbrock, K.1
  • 24
    • 33746064095 scopus 로고    scopus 로고
    • Functional heterogeneity of RpoS in stress tolerance of enterohemorrhagic Escherichia coli strains
    • Bhagwat AA, et al. 2006. Functional heterogeneity of RpoS in stress tolerance of enterohemorrhagic Escherichia coli strains. Appl. Environ. Microbiol. 72:4978-4986.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 4978-4986
    • Bhagwat, A.A.1
  • 25
    • 33744939499 scopus 로고    scopus 로고
    • Mechanisms of tandem repeat instability in bacteria
    • Bichara M, Wagner J, Lambert IB. 2006. Mechanisms of tandem repeat instability in bacteria. Mutat. Res. 598:144-163.
    • (2006) Mutat. Res. , vol.598 , pp. 144-163
    • Bichara, M.1    Wagner, J.2    Lambert, I.B.3
  • 26
    • 50349141358 scopus 로고
    • Treatment of staphylococcal infections with penicillin by intermittent sterilisation
    • Bigger JW. 1944. Treatment of staphylococcal infections with penicillin by intermittent sterilisation. Lancet ii:497-500.
    • (1944) Lancet , vol.2 , pp. 497-500
    • Bigger, J.W.1
  • 27
    • 33846076717 scopus 로고    scopus 로고
    • Phenotypic heterogeneity can enhance rare-cell survival in 'stress-sensitive' yeast populations
    • Bishop AL, Rab FA, Sumner ER, Avery SV. 2007. Phenotypic heterogeneity can enhance rare-cell survival in 'stress-sensitive' yeast populations. Mol. Microbiol. 63:507-520.
    • (2007) Mol. Microbiol. , vol.63 , pp. 507-520
    • Bishop, A.L.1    Rab, F.A.2    Sumner, E.R.3    Avery, S.V.4
  • 28
    • 0037849904 scopus 로고    scopus 로고
    • Stress-induced mutagenesis in bacteria
    • Bjedov I, et al. 2003. Stress-induced mutagenesis in bacteria. Science 300:1404-1409.
    • (2003) Science , vol.300 , pp. 1404-1409
    • Bjedov, I.1
  • 29
    • 0025940779 scopus 로고
    • Structure and organization of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis
    • Black DS, Kelly AJ, Mardis MJ, Moyed HS. 1991. Structure and organization of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis. J. Bacteriol. 173:5732-5739.
    • (1991) J. Bacteriol. , vol.173 , pp. 5732-5739
    • Black, D.S.1    Kelly, A.J.2    Mardis, M.J.3    Moyed, H.S.4
  • 30
    • 15944380038 scopus 로고
    • Kinetic studies of β-galactosidase induction
    • Boezi JA, Cowie DB. 1961. Kinetic studies of β-galactosidase induction. Biophys. J. 1:639-647.
    • (1961) Biophys. J. , vol.1 , pp. 639-647
    • Boezi, J.A.1    Cowie, D.B.2
  • 31
    • 0037104993 scopus 로고    scopus 로고
    • Stress and the single cell: Intrapopulation diversity is a mechanism to ensure survival upon exposure to stress
    • Booth IR. 2002. Stress and the single cell: intrapopulation diversity is a mechanism to ensure survival upon exposure to stress. Int. J. Food Microbiol. 78:19-30.
    • (2002) Int. J. Food Microbiol. , vol.78 , pp. 19-30
    • Booth, I.R.1
  • 32
    • 0028089165 scopus 로고
    • Methylation patterns in pap regulatory DNA control pyelonephritis- associated pili phase variation in E. coli
    • Braaten BA, Nou X, Kaltenbach LS, Low DA. 1994. Methylation patterns in pap regulatory DNA control pyelonephritis-associated pili phase variation in E. coli. Cell 76:577-588.
    • (1994) Cell , vol.76 , pp. 577-588
    • Braaten, B.A.1    Nou, X.2    Kaltenbach, L.S.3    Low, D.A.4
  • 34
    • 0000640710 scopus 로고    scopus 로고
    • Modulation of chemical composition and other parameters of the cell by growth rate
    • Neidhardt FC, et al (ed), 2nd ed. ASM Press, Washington, DC
    • Bremer H, Dennis PP. 1996. Modulation of chemical composition and other parameters of the cell by growth rate, p 1553-1569. In Neidhardt FC, et al (ed), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, DC.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , pp. 1553-1569
    • Bremer, H.1    Dennis, P.P.2
  • 35
    • 77954381780 scopus 로고    scopus 로고
    • Phase variation controls expression of Salmonella lipopolysaccharide modification genes by a DNA methylation-dependent mechanism
    • Broadbent SE, Davies MR, van der Woude MW. 2010. Phase variation controls expression of Salmonella lipopolysaccharide modification genes by a DNA methylation-dependent mechanism. Mol. Microbiol. 77:337-353.
    • (2010) Mol. Microbiol. , vol.77 , pp. 337-353
    • Broadbent, S.E.1    Davies, M.R.2    Van Der Woude, M.W.3
  • 36
    • 77949283889 scopus 로고    scopus 로고
    • Ecological drivers of the evolution of public-goods cooperation in bacteria
    • Brockhurst MA, Habets M, Libberton B, Buckling A, Gardner A. 2010. Ecological drivers of the evolution of public-goods cooperation in bacteria. Ecology 91:334-340.
    • (2010) Ecology , vol.91 , pp. 334-340
    • Brockhurst, M.A.1    Habets, M.2    Libberton, B.3    Buckling, A.4    Gardner, A.5
  • 37
    • 33750024985 scopus 로고    scopus 로고
    • Character displacement promotes cooperation in bacterial biofilms
    • Brockhurst MA, Hochberg ME, Bell T, Buckling A. 2006. Character displacement promotes cooperation in bacterial biofilms. Curr. Biol. 16:2030-2034.
    • (2006) Curr. Biol. , vol.16 , pp. 2030-2034
    • Brockhurst, M.A.1    Hochberg, M.E.2    Bell, T.3    Buckling, A.4
  • 38
    • 0035114380 scopus 로고    scopus 로고
    • Phylogenetic evidence for horizontal transfer of mutS alleles among naturally occurring Escherichia coli strains
    • Brown EW, LeClerc JE, Li BG, Payne WL, Cebula TA. 2001. Phylogenetic evidence for horizontal transfer of mutS alleles among naturally occurring Escherichia coli strains. J. Bacteriol. 183:1631-1644.
    • (2001) J. Bacteriol. , vol.183 , pp. 1631-1644
    • Brown, E.W.1    LeClerc, J.E.2    Li, B.G.3    Payne, W.L.4    Cebula, T.A.5
  • 39
    • 0025078599 scopus 로고
    • Influence of growth rate on susceptibility to antimicrobial agents: Modification of the cell envelope and batch and continuous culture studies
    • Brown MRW, Collier PJ, Gilbert P. 1990. Influence of growth rate on susceptibility to antimicrobial agents: modification of the cell envelope and batch and continuous culture studies. Antimicrob. Agents Chemother. 34:1623-1628.
    • (1990) Antimicrob. Agents Chemother. , vol.34 , pp. 1623-1628
    • Brown, M.R.W.1    Collier, P.J.2    Gilbert, P.3
  • 40
    • 0035902462 scopus 로고    scopus 로고
    • Stationary-phase mutation in the bacterial chromosome: Recombination protein and DNA polymerase IV dependence
    • Bull HJ, Lombardo MJ, Rosenberg SM. 2001. Stationary-phase mutation in the bacterial chromosome: recombination protein and DNA polymerase IV dependence. Proc. Natl. Acad. Sci. U. S. A. 98:8334-8341.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 8334-8341
    • Bull, H.J.1    Lombardo, M.J.2    Rosenberg, S.M.3
  • 41
    • 0002154297 scopus 로고    scopus 로고
    • Bacteriophages
    • Neidhardt FC, et al (ed), 2nd ed. American Society for Microbiology, Washington, DC
    • Campbell AM. 1996. Bacteriophages, p 2325-2338. In Neidhardt FC, et al (ed), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. American Society for Microbiology, Washington, DC.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , pp. 2325-2338
    • Campbell, A.M.1
  • 42
    • 0034001478 scopus 로고    scopus 로고
    • Lateral gene transfer in prokaryotes
    • Campbell AM. 2000. Lateral gene transfer in prokaryotes. Theor. Popul. Biol. 57:71-77.
    • (2000) Theor. Popul. Biol. , vol.57 , pp. 71-77
    • Campbell, A.M.1
  • 46
    • 0036069537 scopus 로고    scopus 로고
    • Gene expression profiling of Escherichia coli growth transitions: An expanded stringent response model
    • Chang DE, Smalley DJ, Conway T. 2002. Gene expression profiling of Escherichia coli growth transitions: an expanded stringent response model. Mol. Microbiol. 45:289-306.
    • (2002) Mol. Microbiol. , vol.45 , pp. 289-306
    • Chang, D.E.1    Smalley, D.J.2    Conway, T.3
  • 47
    • 0022004371 scopus 로고
    • Evolution of transposable elements: An IS10 insertion increases fitness in Escherichia coli
    • Chao L, McBroom SM. 1985. Evolution of transposable elements: an IS10 insertion increases fitness in Escherichia coli. Mol. Biol. Evol. 2:359-369.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 359-369
    • Chao, L.1    McBroom, S.M.2
  • 48
    • 0020625499 scopus 로고
    • Transposable elements as mutator genes in evolution
    • Chao L, Vargas C, Spear BB, Cox EC. 1983. Transposable elements as mutator genes in evolution. Nature 303:634-635.
    • (1983) Nature , vol.303 , pp. 634-635
    • Chao, L.1    Vargas, C.2    Spear, B.B.3    Cox, E.C.4
  • 49
    • 77956454910 scopus 로고    scopus 로고
    • Multiple genetic switches spontaneously modulating bacterial mutability
    • doi:10.1186/1471-2148-10-277
    • Chen F, et al. 2010. Multiple genetic switches spontaneously modulating bacterial mutability. BMC Evol. Biol. 10:277. doi:10.1186/1471-2148-10-277.
    • (2010) BMC Evol. Biol. , vol.10 , pp. 277
    • Chen, F.1
  • 50
    • 77957888148 scopus 로고    scopus 로고
    • mutL as a genetic switch of bacterial mutability: Turned on or off through repeat copy number changes
    • Chen F, et al. 2010. mutL as a genetic switch of bacterial mutability: turned on or off through repeat copy number changes. FEMS Microbiol. Lett. 312:126-132.
    • (2010) FEMS Microbiol. Lett. , vol.312 , pp. 126-132
    • Chen, F.1
  • 51
    • 83055180134 scopus 로고    scopus 로고
    • Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates
    • Chiang SM, Dong T, Edge TA, Schellhorn HE. 2011. Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates. Appl. Environ. Microbiol. 77:7915-7923.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 7915-7923
    • Chiang, S.M.1    Dong, T.2    Edge, T.A.3    Schellhorn, H.E.4
  • 52
    • 77954421693 scopus 로고    scopus 로고
    • Evolution of the RpoS regulon: Origin of RpoS and the conservation of RpoS-dependent regulation in bacteria
    • Chiang SM, Schellhorn HE. 2010. Evolution of the RpoS regulon: origin of RpoS and the conservation of RpoS-dependent regulation in bacteria. J. Mol. Evol. 70:557-571.
    • (2010) J. Mol. Evol. , vol.70 , pp. 557-571
    • Chiang, S.M.1    Schellhorn, H.E.2
  • 53
    • 70349690200 scopus 로고    scopus 로고
    • Fast growth increases the selective advantage of a mutation arising recurrently during evolution under metal limitation
    • doi:10.1371/journal.pgen.1000652.
    • Chou HH, Berthet J, Marx CJ. 2009. Fast growth increases the selective advantage of a mutation arising recurrently during evolution under metal limitation. PLoS Genet. 5:652. doi:10.1371/journal.pgen.1000652.
    • (2009) PLoS Genet. , vol.5 , pp. 652
    • Chou, H.H.1    Berthet, J.2    Marx, C.J.3
  • 55
    • 0028281189 scopus 로고
    • Gene expression in single cells of Bacillus subtilis: Evidence that a threshold mechanism controls the initiation of sporulation
    • Chung JD, Stephanopoulos G, Ireton K, Grossman AD. 1994. Gene expression in single cells of Bacillus subtilis: evidence that a threshold mechanism controls the initiation of sporulation. J. Bacteriol. 176:1977-1984.
    • (1994) J. Bacteriol. , vol.176 , pp. 1977-1984
    • Chung, J.D.1    Stephanopoulos, G.2    Ireton, K.3    Grossman, A.D.4
  • 56
    • 69149098296 scopus 로고    scopus 로고
    • Evolution of altruists and cheaters in near-isogenic populations of Escherichia coli
    • Clark DR, et al. 2009. Evolution of altruists and cheaters in near-isogenic populations of Escherichia coli. Front. Biosci. 14:4815-4824.
    • (2009) Front. Biosci. , vol.14 , pp. 4815-4824
    • Clark, D.R.1
  • 57
    • 33847129667 scopus 로고    scopus 로고
    • Cannibalism and fratricide: Mechanisms and raisons d'etre
    • Claverys JP, Havarstein LS. 2007. Cannibalism and fratricide: mechanisms and raisons d'etre. Nat. Rev. Microbiol. 5:219-229.
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 219-229
    • Claverys, J.P.1    Havarstein, L.S.2
  • 58
    • 16544367143 scopus 로고    scopus 로고
    • Extracellular-peptide control of competence for genetic transformation in Streptococcus pneumoniae
    • Claverys JP, Havarstein LS. 2002. Extracellular-peptide control of competence for genetic transformation in Streptococcus pneumoniae. Front. Biosci. 7:d1798-d1814.
    • (2002) Front. Biosci. , vol.7
    • Claverys, J.P.1    Havarstein, L.S.2
  • 60
    • 33746320813 scopus 로고    scopus 로고
    • Induction of competence regulons as a general response to stress in gram-positive bacteria
    • Claverys JP, Prudhomme M, Martin B. 2006. Induction of competence regulons as a general response to stress in gram-positive bacteria. Annu. Rev. Microbiol. 60:451-475.
    • (2006) Annu. Rev. Microbiol. , vol.60 , pp. 451-475
    • Claverys, J.P.1    Prudhomme, M.2    Martin, B.3
  • 61
    • 84872667314 scopus 로고    scopus 로고
    • Reference deleted
    • Reference deleted.
  • 62
    • 58649088239 scopus 로고    scopus 로고
    • Transcriptional modulator NusA interacts with translesion DNA polymerases in Escherichia coli
    • Cohen SE, Godoy VG, Walker GC. 2009. Transcriptional modulator NusA interacts with translesion DNA polymerases in Escherichia coli. J. Bacteriol. 191:665-672.
    • (2009) J. Bacteriol. , vol.191 , pp. 665-672
    • Cohen, S.E.1    Godoy, V.G.2    Walker, G.C.3
  • 63
    • 73449087603 scopus 로고    scopus 로고
    • The transcription elongation factor NusA is required for stress-induced mutagenesis in Escherichia coli
    • Cohen SE, Walker GC. 2010. The transcription elongation factor NusA is required for stress-induced mutagenesis in Escherichia coli. Curr. Biol. 20:80-85.
    • (2010) Curr. Biol. , vol.20 , pp. 80-85
    • Cohen, S.E.1    Walker, G.C.2
  • 64
    • 79960104605 scopus 로고    scopus 로고
    • Microbial laboratory evolution in the era of genome-scale science
    • Conrad TM, Lewis NE, Palsson BO. 2011. Microbial laboratory evolution in the era of genome-scale science. Mol. Syst. Biol. 7:509.
    • (2011) Mol. Syst. Biol. , vol.7 , pp. 509
    • Conrad, T.M.1    Lewis, N.E.2    Palsson, B.O.3
  • 65
    • 34548693859 scopus 로고    scopus 로고
    • Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli
    • doi:10.1371/journal.pbio.0050225
    • Cooper TF. 2007. Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli. PLoS Biol. 5:1899-1905. doi:10.1371/journal.pbio.0050225.
    • (2007) PLoS Biol. , vol.5 , pp. 1899-1905
    • Cooper, T.F.1
  • 66
    • 40149109210 scopus 로고    scopus 로고
    • Expression profiles reveal parallel evolution of epistatic interactions involving the CRP regulon in Escherichia coli
    • doi:10.1371/journal.pgen.0040035
    • Cooper TF, Remold SK, Lenski RE, Schneider D. 2008. Expression profiles reveal parallel evolution of epistatic interactions involving the CRP regulon in Escherichia coli. PLoS Genet. 4:e35. doi:10.1371/journal.pgen.0040035.
    • (2008) PLoS Genet. , vol.4
    • Cooper, T.F.1    Remold, S.K.2    Lenski, R.E.3    Schneider, D.4
  • 67
    • 0017862069 scopus 로고
    • Cell-growth and length distribution in Escherichia coli
    • Cullum J, Vicente M. 1978. Cell-growth and length distribution in Escherichia coli. J. Bacteriol. 134:330-337.
    • (1978) J. Bacteriol. , vol.134 , pp. 330-337
    • Cullum, J.1    Vicente, M.2
  • 68
    • 0029832083 scopus 로고    scopus 로고
    • Flow cytometry and cell sorting of heterogeneous microbial populations - The importance of single-cell analyses
    • Davey HM, Kell DB. 1996. Flow cytometry and cell sorting of heterogeneous microbial populations - the importance of single-cell analyses. Microbiol. Rev. 60:641.
    • (1996) Microbiol. Rev. , vol.60 , pp. 641
    • Davey, H.M.1    Kell, D.B.2
  • 70
    • 0014512377 scopus 로고
    • Sporulation in Bacillus subtilis. Establishment of a time scale for morphological events
    • Dawes IW, Kay D, Mandelst J. 1969. Sporulation in Bacillus subtilis. Establishment of a time scale for morphological events. J. Gen. Microbiol. 56:171.
    • (1969) J. Gen. Microbiol. , vol.56 , pp. 171
    • Dawes, I.W.1    Kay, D.2    Mandelst, J.3
  • 71
    • 79951552049 scopus 로고    scopus 로고
    • Bet hedging or not? A guide to proper classification of microbial survival strategies
    • de Jong IG, Haccou P, Kuipers OP. 2011. Bet hedging or not? A guide to proper classification of microbial survival strategies. Bioessays 33:215-223.
    • (2011) Bioessays , vol.33 , pp. 215-223
    • De Jong, I.G.1    Haccou, P.2    Kuipers, O.P.3
  • 72
    • 0036134905 scopus 로고    scopus 로고
    • High frequency of mutator strains among human uropathogenic Escherichia coli isolates
    • Denamur E, et al. 2002. High frequency of mutator strains among human uropathogenic Escherichia coli isolates. J. Bacteriol. 184:605-609.
    • (2002) J. Bacteriol. , vol.184 , pp. 605-609
    • Denamur, E.1
  • 73
    • 0034703744 scopus 로고    scopus 로고
    • Evolutionary implications of the frequent horizontal transfer of mismatch repair genes
    • Denamur E, et al. 2000. Evolutionary implications of the frequent horizontal transfer of mismatch repair genes. Cell 103:711-721.
    • (2000) Cell , vol.103 , pp. 711-721
    • Denamur, E.1
  • 74
    • 33847314378 scopus 로고    scopus 로고
    • Beneficial mutation selection balance and the effect of linkage on positive selection
    • Desai MM, Fisher DS. 2007. Beneficial mutation selection balance and the effect of linkage on positive selection. Genetics 176:1759-1798.
    • (2007) Genetics , vol.176 , pp. 1759-1798
    • Desai, M.M.1    Fisher, D.S.2
  • 76
    • 77951575548 scopus 로고    scopus 로고
    • Complexity and diversity
    • Doebeli M, Ispolatov I. 2010. Complexity and diversity. Science 328:494-497.
    • (2010) Science , vol.328 , pp. 494-497
    • Doebeli, M.1    Ispolatov, I.2
  • 77
    • 0036226110 scopus 로고    scopus 로고
    • Expression of mutant alanine tRNAs increases spontaneous mutagenesis in Escherichia coli
    • Dorazi R, Lingutla JJ, Humayun MZ. 2002. Expression of mutant alanine tRNAs increases spontaneous mutagenesis in Escherichia coli. Mol. Microbiol. 44:131-141.
    • (2002) Mol. Microbiol. , vol.44 , pp. 131-141
    • Dorazi, R.1    Lingutla, J.J.2    Humayun, M.Z.3
  • 78
    • 77649174212 scopus 로고    scopus 로고
    • Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli
    • 10.1371/journal.pbio.1000317
    • Dorr T, Vulic M, Lewis K. 2010. Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli. PLoS Biol. 8:317. 10.1371/journal.pbio.1000317.
    • (2010) PLoS Biol. , vol.8 , pp. 317
    • Dorr, T.1    Vulic, M.2    Lewis, K.3
  • 79
    • 0025886466 scopus 로고
    • A constant rate of spontaneous mutation in DNA-based microbes
    • Drake JW. 1991. A constant rate of spontaneous mutation in DNA-based microbes. Proc. Natl. Acad. Sci. U. S. A. 88:7160-7164.
    • (1991) Proc. Natl. Acad. Sci. U. S. A. , vol.88 , pp. 7160-7164
    • Drake, J.W.1
  • 81
    • 70349333227 scopus 로고    scopus 로고
    • The evolutionary consequences of erroneous protein synthesis
    • Drummond DA, Wilke CO. 2009. The evolutionary consequences of erroneous protein synthesis. Nat. Rev. Genet. 10:715-724.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 715-724
    • Drummond, D.A.1    Wilke, C.O.2
  • 82
    • 79951705599 scopus 로고    scopus 로고
    • Intercellular nanotubes mediate bacterial communication
    • Dubey GP, Ben-Yehuda S. 2011. Intercellular nanotubes mediate bacterial communication. Cell 144:590-600.
    • (2011) Cell , vol.144 , pp. 590-600
    • Dubey, G.P.1    Ben-Yehuda, S.2
  • 84
    • 0032697140 scopus 로고    scopus 로고
    • DNA uptake in bacteria
    • Dubnau D. 1999. DNA uptake in bacteria. Annu. Rev. Microbiol. 53:217-244.
    • (1999) Annu. Rev. Microbiol. , vol.53 , pp. 217-244
    • Dubnau, D.1
  • 85
    • 33748058888 scopus 로고    scopus 로고
    • Bistability in bacteria
    • Dubnau D, Losick R. 2006. Bistability in bacteria. Mol. Microbiol. 61:564-572.
    • (2006) Mol. Microbiol. , vol.61 , pp. 564-572
    • Dubnau, D.1    Losick, R.2
  • 86
    • 0031981808 scopus 로고    scopus 로고
    • Santa Rosalia revisited - Why are there so many species of bacteria
    • Dykhuizen DE. 1998. Santa Rosalia revisited - why are there so many species of bacteria. Antonie Van Leeuwenhoek 73:25-33.
    • (1998) Antonie Van Leeuwenhoek , vol.73 , pp. 25-33
    • Dykhuizen, D.E.1
  • 87
    • 0031829602 scopus 로고    scopus 로고
    • UV light induces IS10 transposition in Escherichia coli
    • Eichenbaum Z, Livneh Z. 1998. UV light induces IS10 transposition in Escherichia coli. Genetics 149:1173-1181.
    • (1998) Genetics , vol.149 , pp. 1173-1181
    • Eichenbaum, Z.1    Livneh, Z.2
  • 88
    • 0038441327 scopus 로고    scopus 로고
    • Evolution experiments with microorganisms: The dynamics and genetic bases of adaptation
    • Elena SF, Lenski RE. 2003. Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation. Nat. Rev. Genet. 4:457-469.
    • (2003) Nat. Rev. Genet. , vol.4 , pp. 457-469
    • Elena, S.F.1    Lenski, R.E.2
  • 89
    • 32044465724 scopus 로고    scopus 로고
    • A three-protein signaling pathway governing immunity to a bacterial cannibalism toxin
    • Ellermeier CD, Hobbs EC, Gonzalez-Pastor JE, Losick R. 2006. A three-protein signaling pathway governing immunity to a bacterial cannibalism toxin. Cell 124:549-559.
    • (2006) Cell , vol.124 , pp. 549-559
    • Ellermeier, C.D.1    Hobbs, E.C.2    Gonzalez-Pastor, J.E.3    Losick, R.4
  • 90
    • 38549084066 scopus 로고    scopus 로고
    • Evaluating the role of natural selection in the evolution of gene regulation
    • Fay JC, Wittkopp PJ. 2008. Evaluating the role of natural selection in the evolution of gene regulation. Heredity 100:191-199.
    • (2008) Heredity , vol.100 , pp. 191-199
    • Fay, J.C.1    Wittkopp, P.J.2
  • 91
    • 77958595499 scopus 로고    scopus 로고
    • Mucoidy, quorum sensing, mismatch repair and antibiotic resistance in Pseudomonas aeruginosa from cystic fibrosis chronic airways infections
    • doi:10.1371/journal.pone.0012669
    • Feliziani S, et al. 2010. Mucoidy, quorum sensing, mismatch repair and antibiotic resistance in Pseudomonas aeruginosa from cystic fibrosis chronic airways infections. PLoS One 5:e12669. doi:10.1371/journal.pone.0012669.
    • (2010) PLoS One , vol.5
    • Feliziani, S.1
  • 92
    • 0029992026 scopus 로고    scopus 로고
    • Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cells
    • Feng G, Tsui HCT, Winkler ME. 1996. Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cells. J. Bacteriol. 178:2388-2396.
    • (1996) J. Bacteriol. , vol.178 , pp. 2388-2396
    • Feng, G.1    Tsui, H.C.T.2    Winkler, M.E.3
  • 93
    • 0030200309 scopus 로고    scopus 로고
    • Adaptation to life at micromolar nutrient levels: The regulation of Escherichia coli glucose transport by endoinduction and cAMP
    • Ferenci T. 1996. Adaptation to life at micromolar nutrient levels: the regulation of Escherichia coli glucose transport by endoinduction and cAMP. FEMS Microbiol. Rev. 18:301-317.
    • (1996) FEMS Microbiol. Rev. , vol.18 , pp. 301-317
    • Ferenci, T.1
  • 94
    • 34547739032 scopus 로고    scopus 로고
    • Bacterial physiology, regulation and mutational adaptation in a chemostat environment
    • Ferenci T. 2008. Bacterial physiology, regulation and mutational adaptation in a chemostat environment. Adv. Microb. Physiol. 53:169-229.
    • (2008) Adv. Microb. Physiol. , vol.53 , pp. 169-229
    • Ferenci, T.1
  • 95
    • 21244473267 scopus 로고    scopus 로고
    • Maintaining a healthy SPANC balance through regulatory and mutational adaptation
    • Ferenci T. 2005. Maintaining a healthy SPANC balance through regulatory and mutational adaptation. Mol. Microbiol. 57:1-8.
    • (2005) Mol. Microbiol. , vol.57 , pp. 1-8
    • Ferenci, T.1
  • 96
    • 0033118890 scopus 로고    scopus 로고
    • Regulation by nutrient limitation
    • Ferenci T. 1999. Regulation by nutrient limitation. Curr. Opin. Microbiol. 2:208-213.
    • (1999) Curr. Opin. Microbiol. , vol.2 , pp. 208-213
    • Ferenci, T.1
  • 97
    • 42449118998 scopus 로고    scopus 로고
    • The spread of a beneficial mutation in experimental bacterial populations: The influence of the environment and genotype on the fixation of rpoS mutations
    • Ferenci T. 2008. The spread of a beneficial mutation in experimental bacterial populations: the influence of the environment and genotype on the fixation of rpoS mutations. Heredity 100:446-452.
    • (2008) Heredity , vol.100 , pp. 446-452
    • Ferenci, T.1
  • 98
    • 79953122659 scopus 로고    scopus 로고
    • The constancy of global regulation across a species: The concentrations of ppGpp and RpoS are strain-specific in Escherichia coli
    • doi:10.1186/1471-2180-11-62
    • Ferenci T, Galbiati H, Betteridge T, Phan K, Spira B. 2011. The constancy of global regulation across a species: the concentrations of ppGpp and RpoS are strain-specific in Escherichia coli. BMC Microbiol. 11:62. doi:10.1186/1471- 2180-11-62.
    • (2011) BMC Microbiol. , vol.11 , pp. 62
    • Ferenci, T.1    Galbiati, H.2    Betteridge, T.3    Phan, K.4    Spira, B.5
  • 99
    • 0038401982 scopus 로고    scopus 로고
    • Identification of additional genes belonging to the LexA regulon in Escherichia coli
    • Fernandez de Henestrosa AR, et al. 2000. Identification of additional genes belonging to the LexA regulon in Escherichia coli. Mol. Microbiol. 35:1560-1572.
    • (2000) Mol. Microbiol. , vol.35 , pp. 1560-1572
    • Fernandez De Henestrosa, A.R.1
  • 100
    • 31544474634 scopus 로고    scopus 로고
    • Long-term survival during stationary phase: Evolution and the GASP phenotype
    • Finkel SE. 2006. Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4:113-120.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 113-120
    • Finkel, S.E.1
  • 101
  • 102
    • 35148899681 scopus 로고    scopus 로고
    • Stress-induced mutagenesis in bacteria
    • Foster PL. 2007. Stress-induced mutagenesis in bacteria. Crit. Rev. Biochem. Mol. Biol. 42:373-397.
    • (2007) Crit. Rev. Biochem. Mol. Biol. , vol.42 , pp. 373-397
    • Foster, P.L.1
  • 103
    • 59849086092 scopus 로고    scopus 로고
    • The bacterial species challenge: Making sense of genetic and ecological diversity
    • Fraser C, Alm EJ, Polz MF, Spratt BG, Hanage WP. 2009. The bacterial species challenge: making sense of genetic and ecological diversity. Science 323:741-746.
    • (2009) Science , vol.323 , pp. 741-746
    • Fraser, C.1    Alm, E.J.2    Polz, M.F.3    Spratt, B.G.4    Hanage, W.P.5
  • 104
    • 62449123034 scopus 로고    scopus 로고
    • A chance at survival: Gene expression noise and phenotypic diversification strategies
    • Fraser D, Kaern M. 2009. A chance at survival: gene expression noise and phenotypic diversification strategies. Mol. Microbiol. 71:1333-1340.
    • (2009) Mol. Microbiol. , vol.71 , pp. 1333-1340
    • Fraser, D.1    Kaern, M.2
  • 105
    • 58149147307 scopus 로고    scopus 로고
    • A simple screen to identify promoters conferring high levels of phenotypic noise
    • doi:10.1371/journal.pgen.1000307
    • Freed NE, et al. 2008. A simple screen to identify promoters conferring high levels of phenotypic noise. PLoS Genet. 4:e1000307. doi:10.1371/journal. pgen.1000307.
    • (2008) PLoS Genet. , vol.4
    • Freed, N.E.1
  • 107
    • 1642388599 scopus 로고    scopus 로고
    • Experimental evidence for sympatric ecological diversification due to frequency-dependent competition in Escherichia coli
    • Friesen ML, Saxer G, Travisano M, Doebeli M. 2004. Experimental evidence for sympatric ecological diversification due to frequency-dependent competition in Escherichia coli. Evolution 58:245-260.
    • (2004) Evolution , vol.58 , pp. 245-260
    • Friesen, M.L.1    Saxer, G.2    Travisano, M.3    Doebeli, M.4
  • 108
    • 14544290034 scopus 로고    scopus 로고
    • High- and low-threshold genes in the Spo0A regulon of Bacillus subtilis
    • Fujita M, Gonzalez-Pastor JE, Losick R. 2005. High- and low-threshold genes in the Spo0A regulon of Bacillus subtilis. J. Bacteriol. 187:1357-1368.
    • (2005) J. Bacteriol. , vol.187 , pp. 1357-1368
    • Fujita, M.1    Gonzalez-Pastor, J.E.2    Losick, R.3
  • 109
    • 0034049514 scopus 로고    scopus 로고
    • The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness
    • Funchain P, et al. 2000. The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness. Genetics 154:959-970.
    • (2000) Genetics , vol.154 , pp. 959-970
    • Funchain, P.1
  • 110
    • 79958192448 scopus 로고    scopus 로고
    • Insertion sequence-driven evolution of Escherichia coli in chemostats
    • Gaffe J, et al. 2011. Insertion sequence-driven evolution of Escherichia coli in chemostats. J. Mol. Evol. 72:398-412.
    • (2011) J. Mol. Evol. , vol.72 , pp. 398-412
    • Gaffe, J.1
  • 111
    • 67849086820 scopus 로고    scopus 로고
    • DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli
    • Galhardo RS, et al. 2009. DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli. Genetics 182:55-68.
    • (2009) Genetics , vol.182 , pp. 55-68
    • Galhardo, R.S.1
  • 113
    • 0030794124 scopus 로고    scopus 로고
    • Pathways for homologous recombination between chromosomal direct repeats in Salmonella typhimurium
    • Galitski T, Roth JR. 1997. Pathways for homologous recombination between chromosomal direct repeats in Salmonella typhimurium. Genetics 146:751-767.
    • (1997) Genetics , vol.146 , pp. 751-767
    • Galitski, T.1    Roth, J.R.2
  • 115
    • 0345333119 scopus 로고
    • Unique type of plasmid maintenance function: Postsegregational killing of plasmid-free cells
    • Gerdes K, Rasmussen PB, Molin S. 1986. Unique type of plasmid maintenance function: postsegregational killing of plasmid-free cells. Proc. Natl. Acad. Sci. U. S. A. 83:3116-3120.
    • (1986) Proc. Natl. Acad. Sci. U. S. A. , vol.83 , pp. 3116-3120
    • Gerdes, K.1    Rasmussen, P.B.2    Molin, S.3
  • 116
    • 2542583245 scopus 로고    scopus 로고
    • The fate of competing beneficial mutations in an asexual population
    • Gerrish PJ, Lenski RE. 1998. The fate of competing beneficial mutations in an asexual population. Genetica 103:127-144.
    • (1998) Genetica , vol.103 , pp. 127-144
    • Gerrish, P.J.1    Lenski, R.E.2
  • 117
    • 77954354375 scopus 로고    scopus 로고
    • The sigma E stress response is required for stress-induced mutation and amplification in Escherichia coli
    • Gibson JL, et al. 2010. The sigma E stress response is required for stress-induced mutation and amplification in Escherichia coli. Mol. Microbiol. 77:415-430.
    • (2010) Mol. Microbiol. , vol.77 , pp. 415-430
    • Gibson, J.L.1
  • 120
    • 37349132340 scopus 로고    scopus 로고
    • UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB
    • Godoy VG, et al. 2007. UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB. Mol. Cell 28:1058-1070.
    • (2007) Mol. Cell , vol.28 , pp. 1058-1070
    • Godoy, V.G.1
  • 121
    • 28944434119 scopus 로고    scopus 로고
    • Real-time kinetics of gene activity in individual bacteria
    • Golding I, Paulsson J, Zawilski SM, Cox EC. 2005. Real-time kinetics of gene activity in individual bacteria. Cell 123:1025-1036.
    • (2005) Cell , vol.123 , pp. 1025-1036
    • Golding, I.1    Paulsson, J.2    Zawilski, S.M.3    Cox, E.C.4
  • 122
    • 0034633750 scopus 로고    scopus 로고
    • Plasmid-encoded MucB protein is a DNA polymerase (pol RI) specialized for lesion bypass in the presence of MucA′, RecA, and SSB
    • Goldsmith M, Sarov-Blat L, Livneh Z. 2000. Plasmid-encoded MucB protein is a DNA polymerase (pol RI) specialized for lesion bypass in the presence of MucA′, RecA, and SSB. Proc. Natl. Acad. Sci. U. S. A. 97:11227-11231.
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 11227-11231
    • Goldsmith, M.1    Sarov-Blat, L.2    Livneh, Z.3
  • 123
    • 79953323267 scopus 로고    scopus 로고
    • Cannibalism: A social behavior in sporulating Bacillus subtilis
    • Gonzalez-Pastor JE. 2011. Cannibalism: a social behavior in sporulating Bacillus subtilis. FEMS Microbiol. Rev. 35:415-424.
    • (2011) FEMS Microbiol. Rev. , vol.35 , pp. 415-424
    • Gonzalez-Pastor, J.E.1
  • 125
    • 58149166731 scopus 로고    scopus 로고
    • The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast
    • doi:10.1371/journal.pgen.1000303
    • Gresham D, et al. 2008. The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast. PLoS Genet. 4:e1000303. doi:10.1371/journal.pgen.1000303.
    • (2008) PLoS Genet. , vol.4
    • Gresham, D.1
  • 126
    • 34547900671 scopus 로고    scopus 로고
    • Constraints on microbial metabolism drive evolutionary diversification in homogeneous environments
    • Gudelj I, Beardmore RE, Arkin SS, Maclean RC. 2007. Constraints on microbial metabolism drive evolutionary diversification in homogeneous environments. J. Evol. Biol. 20:1882-1889.
    • (2007) J. Evol. Biol. , vol.20 , pp. 1882-1889
    • Gudelj, I.1    Beardmore, R.E.2    Arkin, S.S.3    Maclean, R.C.4
  • 127
    • 77955972009 scopus 로고    scopus 로고
    • An integrative approach to understanding microbial diversity: From intracellular mechanisms to community structure
    • Gudelj I, et al. 2010. An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure. Ecol. Lett. 13:1073-1084.
    • (2010) Ecol. Lett. , vol.13 , pp. 1073-1084
    • Gudelj, I.1
  • 128
    • 20844444771 scopus 로고    scopus 로고
    • Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: Genetic requirements
    • Guiral S, Mitchell TJ, Martin B, Claverys JP. 2005. Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: genetic requirements. Proc. Natl. Acad. Sci. U. S. A. 102:8710-8715.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 8710-8715
    • Guiral, S.1    Mitchell, T.J.2    Martin, B.3    Claverys, J.P.4
  • 129
    • 0028786073 scopus 로고
    • Recombination between chromosomal IS200 elements supports frequent duplication formation in Salmonella typhimurium
    • Haack KR, Roth JR. 1995. Recombination between chromosomal IS200 elements supports frequent duplication formation in Salmonella typhimurium. Genetics 141:1245-1252.
    • (1995) Genetics , vol.141 , pp. 1245-1252
    • Haack, K.R.1    Roth, J.R.2
  • 130
    • 0033951395 scopus 로고    scopus 로고
    • Phase variation of Ag43 in Escherichia coli: Dam-dependent methylation abrogates OxyR binding and OxyR-mediated repression of transcription
    • Haagmans W, Van Der Woude M. 2000. Phase variation of Ag43 in Escherichia coli: Dam-dependent methylation abrogates OxyR binding and OxyR-mediated repression of transcription. Mol. Microbiol. 35:877-887.
    • (2000) Mol. Microbiol. , vol.35 , pp. 877-887
    • Haagmans, W.1    Van Der Woude, M.2
  • 131
    • 0344374434 scopus 로고    scopus 로고
    • Flagellate predation on a bacterial model community: Interplay of size-selective grazing, specific bacterial cell size, and bacterial community composition
    • Hahn MW, Höfle MG. 1999. Flagellate predation on a bacterial model community: interplay of size-selective grazing, specific bacterial cell size, and bacterial community composition. Appl. Environ. Microbiol. 65:4863-4872.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4863-4872
    • Hahn, M.W.1    Höfle, M.G.2
  • 132
    • 84955349191 scopus 로고
    • The mathematical theory of natural and artificial selection. V. Selection and mutation
    • Haldane JBS. 1927. The mathematical theory of natural and artificial selection. V. Selection and mutation. Proc. Camb. Philos. Soc. 23:838-844.
    • (1927) Proc. Camb. Philos. Soc. , vol.23 , pp. 838-844
    • Haldane, J.B.S.1
  • 133
    • 0033166541 scopus 로고    scopus 로고
    • Mismatch repair is diminished during stationary-phase mutation
    • Harris RS, et al. 1999. Mismatch repair is diminished during stationary-phase mutation. Mutat. Res. 437:51-60.
    • (1999) Mutat. Res. , vol.437 , pp. 51-60
    • Harris, R.S.1
  • 134
    • 0030987686 scopus 로고    scopus 로고
    • Mismatch repair protein MutL becomes limiting during stationary-phase mutation
    • Harris RS, et al. 1997. Mismatch repair protein MutL becomes limiting during stationary-phase mutation. Genes Dev. 11:2426-2437.
    • (1997) Genes Dev. , vol.11 , pp. 2426-2437
    • Harris, R.S.1
  • 135
    • 33746868365 scopus 로고    scopus 로고
    • Cooperation and virulence in acute Pseudomonas aeruginosa infections
    • doi:10.1186/1741-7007-4-21
    • Harrison F, Browning LE, Vos M, Buckling A. 2006. Cooperation and virulence in acute Pseudomonas aeruginosa infections. BMC Biol. 4:21. doi:10.1186/1741-7007-4-21.
    • (2006) BMC Biol. , vol.4 , pp. 21
    • Harrison, F.1    Browning, L.E.2    Vos, M.3    Buckling, A.4
  • 138
    • 14044252089 scopus 로고    scopus 로고
    • Adaptive amplification and point mutation are independent mechanisms: Evidence for various stress-inducible mutation mechanisms
    • doi:10.1371/journal.pbio.0020399
    • Hastings PJ, Slack A, Petrosino JF, Rosenberg SM. 2004. Adaptive amplification and point mutation are independent mechanisms: evidence for various stress-inducible mutation mechanisms. PLoS Biol. 2:e399. doi:10.1371/journal.pbio.0020399.
    • (2004) PLoS Biol. , vol.2
    • Hastings, P.J.1    Slack, A.2    Petrosino, J.F.3    Rosenberg, S.M.4
  • 139
    • 33645081479 scopus 로고    scopus 로고
    • New insights into the pneumococcal fratricide: Relationship to clumping and identification of a novel immunity factor
    • Havarstein LS, Martin B, Johnsborg O, Granadel C, Claverys JP. 2006. New insights into the pneumococcal fratricide: relationship to clumping and identification of a novel immunity factor. Mol. Microbiol. 59:1297-1307.
    • (2006) Mol. Microbiol. , vol.59 , pp. 1297-1307
    • Havarstein, L.S.1    Martin, B.2    Johnsborg, O.3    Granadel, C.4    Claverys, J.P.5
  • 140
    • 0141707105 scopus 로고    scopus 로고
    • Toxins-antitoxins: Plasmid maintenance, programmed cell death, and cell cycle arrest
    • Hayes F. 2003. Toxins-antitoxins: plasmid maintenance, programmed cell death, and cell cycle arrest. Science 301:1496-1499.
    • (2003) Science , vol.301 , pp. 1496-1499
    • Hayes, F.1
  • 141
    • 63049137897 scopus 로고    scopus 로고
    • Principles of c-di-GMP signalling in bacteria
    • Hengge R. 2009. Principles of c-di-GMP signalling in bacteria. Nat. Rev. Microbiol. 7:263-273.
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 263-273
    • Hengge, R.1
  • 142
    • 0036714331 scopus 로고    scopus 로고
    • Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
    • Hengge-Aronis R. 2002. Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev. 66:373-395.
    • (2002) Microbiol. Mol. Biol. Rev. , vol.66 , pp. 373-395
    • Hengge-Aronis, R.1
  • 143
    • 0027509821 scopus 로고
    • Survival of hunger and stress: The role of rpoS in early stationary phase gene regulation in E. coli
    • Hengge-Aronis R. 1993. Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation in E. coli. Cell 72:165-168.
    • (1993) Cell , vol.72 , pp. 165-168
    • Hengge-Aronis, R.1
  • 146
    • 14244270260 scopus 로고    scopus 로고
    • Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures
    • Hua Q, Yang C, Oshima T, Mori H, Shimizu K. 2004. Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures. Appl. Environ. Microbiol. 70:2354-2366.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 2354-2366
    • Hua, Q.1    Yang, C.2    Oshima, T.3    Mori, H.4    Shimizu, K.5
  • 147
    • 0035970061 scopus 로고    scopus 로고
    • Fitness effects of advantageous mutations in evolving Escherichia coli populations
    • Imhof M, Schlotterer C. 2001. Fitness effects of advantageous mutations in evolving Escherichia coli populations. Proc. Natl. Acad. Sci. U. S. A. 98:1113-1117.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 1113-1117
    • Imhof, M.1    Schlotterer, C.2
  • 149
    • 67149107104 scopus 로고    scopus 로고
    • Increased antibiotic resistance of Escherichia coli in mature biofilms
    • Ito A, Taniuchi A, May T, Kawata K, Okabe S. 2009. Increased antibiotic resistance of Escherichia coli in mature biofilms. Appl. Environ. Microbiol. 75:4093-4100.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 4093-4100
    • Ito, A.1    Taniuchi, A.2    May, T.3    Kawata, K.4    Okabe, S.5
  • 151
    • 0031028408 scopus 로고    scopus 로고
    • Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110
    • Jishage M, Ishihama A. 1997. Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110. J. Bacteriol. 179:959-963.
    • (1997) J. Bacteriol. , vol.179 , pp. 959-963
    • Jishage, M.1    Ishihama, A.2
  • 152
    • 45149120630 scopus 로고    scopus 로고
    • A predatory mechanism dramatically increases the efficiency of lateral gene transfer in Streptococcus pneumoniae and related commensal species
    • Johnsborg O, Eldholm V, Bjornstad ML, Havarstein LS. 2008. A predatory mechanism dramatically increases the efficiency of lateral gene transfer in Streptococcus pneumoniae and related commensal species. Mol. Microbiol. 69:245-253.
    • (2008) Mol. Microbiol. , vol.69 , pp. 245-253
    • Johnsborg, O.1    Eldholm, V.2    Bjornstad, M.L.3    Havarstein, L.S.4
  • 153
    • 0027273758 scopus 로고
    • How and why bacteria talk to each other
    • Kaiser D, Losick R. 1993. How and why bacteria talk to each other. Cell 73:873-885.
    • (1993) Cell , vol.73 , pp. 873-885
    • Kaiser, D.1    Losick, R.2
  • 154
    • 29144501313 scopus 로고    scopus 로고
    • Cell population heterogeneity during growth of Bacillus subtilis
    • Kearns DB, Losick R. 2005. Cell population heterogeneity during growth of Bacillus subtilis. Genes Dev. 19:3083-3094.
    • (2005) Genes Dev. , vol.19 , pp. 3083-3094
    • Kearns, D.B.1    Losick, R.2
  • 155
    • 0001083330 scopus 로고
    • The growth rate of individual bacterial cells
    • Kelly CD, Rahn O. 1932. The growth rate of individual bacterial cells. J. Bacteriol. 23:147-153.
    • (1932) J. Bacteriol. , vol.23 , pp. 147-153
    • Kelly, C.D.1    Rahn, O.2
  • 156
    • 10044266575 scopus 로고    scopus 로고
    • Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli
    • Keren I, Shah D, Spoering A, Kaldalu N, Lewis K. 2004. Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli. J. Bacteriol. 186:8172-8180.
    • (2004) J. Bacteriol. , vol.186 , pp. 8172-8180
    • Keren, I.1    Shah, D.2    Spoering, A.3    Kaldalu, N.4    Lewis, K.5
  • 157
    • 4344633752 scopus 로고    scopus 로고
    • A regulatory trade-off as a source of strain variation in the species Escherichia coli
    • King T, Ishihama A, Kori A, Ferenci T. 2004. A regulatory trade-off as a source of strain variation in the species Escherichia coli. J. Bacteriol. 186:5614-5620.
    • (2004) J. Bacteriol. , vol.186 , pp. 5614-5620
    • King, T.1    Ishihama, A.2    Kori, A.3    Ferenci, T.4
  • 158
    • 73649085796 scopus 로고    scopus 로고
    • E unibus plurum: Genomic analysis of an experimentally evolved polymorphism in Escherichia coli
    • doi:10.1371/journal.pgen.1000713
    • Kinnersley MA, Holben WE, Rosenzweig F. 2009. E unibus plurum: genomic analysis of an experimentally evolved polymorphism in Escherichia coli. PLoS Genet. 5:713. doi:10.1371/journal.pgen.1000713.
    • (2009) PLoS Genet. , vol.5 , pp. 713
    • Kinnersley, M.A.1    Holben, W.E.2    Rosenzweig, F.3
  • 159
    • 72249097352 scopus 로고    scopus 로고
    • Growth rate-dependent global effects on gene expression in bacteria
    • Klumpp S, Zhang ZG, Hwa T. 2009. Growth rate-dependent global effects on gene expression in bacteria. Cell 139:1366-1375.
    • (2009) Cell , vol.139 , pp. 1366-1375
    • Klumpp, S.1    Zhang, Z.G.2    Hwa, T.3
  • 160
  • 161
    • 79960169250 scopus 로고    scopus 로고
    • Close encounters: Contact-dependent interactions in bacteria
    • Konovalova A, Sogaard-Andersen L. 2011. Close encounters: contact-dependent interactions in bacteria. Mol. Microbiol. 81:297-301.
    • (2011) Mol. Microbiol. , vol.81 , pp. 297-301
    • Konovalova, A.1    Sogaard-Andersen, L.2
  • 162
    • 0344826574 scopus 로고    scopus 로고
    • Characterization of the hipA7 allele of Escherichia coli and evidence that high persistence is governed by (p)ppGpp synthesis
    • Korch SB, Henderson TA, Hill TM. 2003. Characterization of the hipA7 allele of Escherichia coli and evidence that high persistence is governed by (p)ppGpp synthesis. Mol. Microbiol. 50:1199-1213.
    • (2003) Mol. Microbiol. , vol.50 , pp. 1199-1213
    • Korch, S.B.1    Henderson, T.A.2    Hill, T.M.3
  • 163
    • 0032836258 scopus 로고    scopus 로고
    • Inorganic polyphosphate: A molecule of many functions
    • Kornberg A, Rao NN, Ault-Riche D. 1999. Inorganic polyphosphate: a molecule of many functions. Annu. Rev. Biochem. 68:89-125.
    • (1999) Annu. Rev. Biochem. , vol.68 , pp. 89-125
    • Kornberg, A.1    Rao, N.N.2    Ault-Riche, D.3
  • 164
    • 0037235274 scopus 로고    scopus 로고
    • Genomic variability among enteric pathogens: The case of the mutS-rpoS intergenic region
    • Kotewicz ML, Brown EW, Leclerc JE, Cebula TA. 2003. Genomic variability among enteric pathogens: the case of the mutS-rpoS intergenic region. Trends Microbiol. 11:2-6.
    • (2003) Trends Microbiol. , vol.11 , pp. 2-6
    • Kotewicz, M.L.1    Brown, E.W.2    Leclerc, J.E.3    Cebula, T.A.4
  • 165
    • 0034686043 scopus 로고    scopus 로고
    • RpoS-dependent promoters require guanosine tetraphosphate for induction even in the presence of high levels of sigma(s)
    • Kvint K, Farewell A, Nystrom T. 2000. RpoS-dependent promoters require guanosine tetraphosphate for induction even in the presence of high levels of sigma(s). J. Biol. Chem. 275:14795-14798.
    • (2000) J. Biol. Chem. , vol.275 , pp. 14795-14798
    • Kvint, K.1    Farewell, A.2    Nystrom, T.3
  • 166
    • 0142062024 scopus 로고    scopus 로고
    • Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli
    • Layton JC, Foster PL. 2003. Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol. Microbiol. 50:549-561.
    • (2003) Mol. Microbiol. , vol.50 , pp. 549-561
    • Layton, J.C.1    Foster, P.L.2
  • 167
    • 0029860724 scopus 로고    scopus 로고
    • High mutation frequencies among Escherichia coli and Salmonella pathogens
    • Leclerc JE, Li BG, Payne WL, Cebula TA. 1996. High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 274:1208-1211.
    • (1996) Science , vol.274 , pp. 1208-1211
    • Leclerc, J.E.1    Li, B.G.2    Payne, W.L.3    Cebula, T.A.4
  • 168
    • 77956328000 scopus 로고    scopus 로고
    • Bacterial charity work leads to population-wide resistance
    • Lee HH, Molla MN, Cantor CR, Collins JJ. 2010. Bacterial charity work leads to population-wide resistance. Nature 467:82-U113.
    • (2010) Nature , vol.467
    • Lee, H.H.1    Molla, M.N.2    Cantor, C.R.3    Collins, J.J.4
  • 169
    • 77953206694 scopus 로고    scopus 로고
    • Indole as an intercellular signal in microbial communities
    • Lee JH, Lee J. 2010. Indole as an intercellular signal in microbial communities. FEMS Microbiol. Rev. 34:426-444.
    • (2010) FEMS Microbiol. Rev. , vol.34 , pp. 426-444
    • Lee, J.H.1    Lee, J.2
  • 170
    • 0034959832 scopus 로고    scopus 로고
    • Acid stress, starvation, and cold stress affect poststress behavior of Escherichia coli O157:H7 and nonpathogenic Escherichia coli
    • Leenanon B, Drake MA. 2001. Acid stress, starvation, and cold stress affect poststress behavior of Escherichia coli O157:H7 and nonpathogenic Escherichia coli. J. Food Prot. 64:970-974.
    • (2001) J. Food Prot. , vol.64 , pp. 970-974
    • Leenanon, B.1    Drake, M.A.2
  • 171
    • 40449127567 scopus 로고    scopus 로고
    • Metabolic changes associated with adaptive diversification in Escherichia coli
    • Le Gac M, et al. 2008. Metabolic changes associated with adaptive diversification in Escherichia coli. Genetics 178:1049-1060.
    • (2008) Genetics , vol.178 , pp. 1049-1060
    • Le Gac, M.1
  • 172
    • 0018926081 scopus 로고
    • Involvement of ribosomal ribonucleic acid operons in Salmonella typhimurium chromosomal rearrangements
    • Lehner AF, Hill CW. 1980. Involvement of ribosomal ribonucleic acid operons in Salmonella typhimurium chromosomal rearrangements. J. Bacteriol. 143:492-498.
    • (1980) J. Bacteriol. , vol.143 , pp. 492-498
    • Lehner, A.F.1    Hill, C.W.2
  • 174
    • 36348968947 scopus 로고    scopus 로고
    • The evolution of contact-dependent inhibition in non-growing populations of Escherichia coli
    • Lemonnier M, et al. 2008. The evolution of contact-dependent inhibition in non-growing populations of Escherichia coli. Proc. R. Soc. B Biol. Sci. 275:3-10.
    • (2008) Proc. R. Soc. B Biol. Sci. , vol.275 , pp. 3-10
    • Lemonnier, M.1
  • 175
    • 33845487715 scopus 로고    scopus 로고
    • Balancing robustness and evolvability
    • doi:10.1371/journal.pbio.0040428
    • Lenski RE, Barrick JE, Ofria C. 2006. Balancing robustness and evolvability. PLoS Biol. 4:2190-2192. doi:10.1371/journal.pbio.0040428.
    • (2006) PLoS Biol. , vol.4 , pp. 2190-2192
    • Lenski, R.E.1    Barrick, J.E.2    Ofria, C.3
  • 176
    • 21844434913 scopus 로고    scopus 로고
    • Evolutionary origins of genomic repertoires in bacteria
    • doi:10.1371/journal.pbio.0030130
    • Lerat E, Daubin V, Ochman H, Moran NA. 2005. Evolutionary origins of genomic repertoires in bacteria. PLoS Biol. 3:807-814. doi:10.1371/journal.pbio. 0030130.
    • (2005) PLoS Biol. , vol.3 , pp. 807-814
    • Lerat, E.1    Daubin, V.2    Ochman, H.3    Moran, N.A.4
  • 177
    • 78149294782 scopus 로고    scopus 로고
    • Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections
    • doi:10.1371/journal.ppat.1001125
    • Levert M, et al. 2010. Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections. PLoS Pathog. 6:1125. doi:10.1371/journal.ppat.1001125.
    • (2010) PLoS Pathog. , vol.6 , pp. 1125
    • Levert, M.1
  • 178
    • 0024280109 scopus 로고
    • Frequency dependent selection in bacterial populations
    • Levin BR. 1988. Frequency dependent selection in bacterial populations. Philos. Trans. R. Soc. B 319:459-472.
    • (1988) Philos. Trans. R. Soc. B , vol.319 , pp. 459-472
    • Levin, B.R.1
  • 179
  • 180
    • 38049125557 scopus 로고    scopus 로고
    • Mechanisms and functions of DNA mismatch repair
    • Li GM. 2008. Mechanisms and functions of DNA mismatch repair. Cell Res. 18:85-98.
    • (2008) Cell Res. , vol.18 , pp. 85-98
    • Li, G.M.1
  • 181
    • 80052330521 scopus 로고    scopus 로고
    • Global chromosomal structural instability in a subpopulation of starving Escherichia coli cells
    • doi:10.1371/journal.pgen.1002223
    • Lin DX, et al. 2011. Global chromosomal structural instability in a subpopulation of starving Escherichia coli cells. PLoS Genet. 7:2223. doi:10.1371/journal.pgen.1002223.
    • (2011) PLoS Genet. , vol.7 , pp. 2223
    • Lin, D.X.1
  • 182
    • 0021613767 scopus 로고
    • A repetitive DNA-sequence, Rhs, responsible for duplications within the Escherichia coli K-12 chromosome
    • Lin RJ, Capage M, Hill CW. 1984. A repetitive DNA-sequence, Rhs, responsible for duplications within the Escherichia coli K-12 chromosome. J. Mol. Biol. 177:1-18.
    • (1984) J. Mol. Biol. , vol.177 , pp. 1-18
    • Lin, R.J.1    Capage, M.2    Hill, C.W.3
  • 183
    • 78149293610 scopus 로고    scopus 로고
    • Mutational robustness of ribosomal protein genes
    • Lind PA, Berg OG, Andersson DI. 2010. Mutational robustness of ribosomal protein genes. Science 330:825-827.
    • (2010) Science , vol.330 , pp. 825-827
    • Lind, P.A.1    Berg, O.G.2    Andersson, D.I.3
  • 185
    • 0035168385 scopus 로고    scopus 로고
    • An analysis of multifactorial influences on the transcriptional control of ompF and ompC porin expression under nutrient limitation
    • Liu XQ, Ferenci T. 2001. An analysis of multifactorial influences on the transcriptional control of ompF and ompC porin expression under nutrient limitation. Microbiology 147:2981-2989.
    • (2001) Microbiology , vol.147 , pp. 2981-2989
    • Liu, X.Q.1    Ferenci, T.2
  • 186
    • 0033926917 scopus 로고    scopus 로고
    • Global adaptations resulting from high population densities in Escherichia coli cultures
    • Liu XQ, Ng C, Ferenci T. 2000. Global adaptations resulting from high population densities in Escherichia coli cultures. J. Bacteriol. 182:4158-4164.
    • (2000) J. Bacteriol. , vol.182 , pp. 4158-4164
    • Liu, X.Q.1    Ng, C.2    Ferenci, T.3
  • 188
    • 1642354817 scopus 로고    scopus 로고
    • General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli
    • Lombardo MJ, Aponyi I, Rosenberg SM. 2004. General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli. Genetics 166:669-680.
    • (2004) Genetics , vol.166 , pp. 669-680
    • Lombardo, M.J.1    Aponyi, I.2    Rosenberg, S.M.3
  • 189
    • 75749151681 scopus 로고    scopus 로고
    • Extracellular signals that define distinct and coexisting cell fates in Bacillus subtilis
    • Lopez D, Kolter R. 2010. Extracellular signals that define distinct and coexisting cell fates in Bacillus subtilis. FEMS Microbiol. Rev. 34:134-149.
    • (2010) FEMS Microbiol. Rev. , vol.34 , pp. 134-149
    • Lopez, D.1    Kolter, R.2
  • 190
    • 57549105056 scopus 로고    scopus 로고
    • Generation of multiple cell types in Bacillus subtilis
    • Lopez D, Vlamakis H, Kolter R. 2009. Generation of multiple cell types in Bacillus subtilis. FEMS Microbiol. Rev. 33:152-163.
    • (2009) FEMS Microbiol. Rev. , vol.33 , pp. 152-163
    • Lopez, D.1    Vlamakis, H.2    Kolter, R.3
  • 192
    • 70350414428 scopus 로고    scopus 로고
    • Cannibalism enhances biofilm development in Bacillus subtilis
    • Lopez D, Vlamakis H, Losick R, Kolter R. 2009. Cannibalism enhances biofilm development in Bacillus subtilis. Mol. Microbiol. 74:609-618.
    • (2009) Mol. Microbiol. , vol.74 , pp. 609-618
    • Lopez, D.1    Vlamakis, H.2    Losick, R.3    Kolter, R.4
  • 193
  • 194
    • 77955090647 scopus 로고    scopus 로고
    • Evolution of the mutation rate
    • Lynch M. 2010. Evolution of the mutation rate. Trends Genet. 26:345-352.
    • (2010) Trends Genet. , vol.26 , pp. 345-352
    • Lynch, M.1
  • 195
    • 33750344923 scopus 로고    scopus 로고
    • Streamlining and simplification of microbial genome architecture
    • Lynch M. 2006. Streamlining and simplification of microbial genome architecture. Annu. Rev. Microbiol. 60:327-349.
    • (2006) Annu. Rev. Microbiol. , vol.60 , pp. 327-349
    • Lynch, M.1
  • 198
    • 0035014383 scopus 로고    scopus 로고
    • Mechanisms of biofilm resistance to antimicrobial agents
    • Mah TFC, O'Toole GA. 2001. Mechanisms of biofilm resistance to antimicrobial agents. Trends Microbiol. 9:34-39.
    • (2001) Trends Microbiol. , vol.9 , pp. 34-39
    • Mah, T.F.C.1    O'Toole, G.A.2
  • 199
    • 84861930803 scopus 로고    scopus 로고
    • The multiplicity of divergence mechanisms in a single evolving population
    • doi:10.1186/gb-2012-13-6-r41
    • Maharjan R, et al. 2012. The multiplicity of divergence mechanisms in a single evolving population. Genome Biol. 13:R41. doi:10.1186/gb-2012-13-6-r41.
    • (2012) Genome Biol. , vol.13
    • Maharjan, R.1
  • 200
    • 84872666599 scopus 로고    scopus 로고
    • The basis of antagonistic pleiotropy in hfq mutations that have opposite effects on fitness at slow and fast growth rates
    • in press
    • Maharjan R, McKenzie C, Yeung A, Ferenci T. The basis of antagonistic pleiotropy in hfq mutations that have opposite effects on fitness at slow and fast growth rates. Heredity, in press.
    • Heredity
    • Maharjan, R.1    McKenzie, C.2    Yeung, A.3    Ferenci, T.4
  • 201
    • 33947157567 scopus 로고    scopus 로고
    • Divergence and redundancy of transport and metabolic rate-yield strategies in a single Escherichia coli population
    • Maharjan R, Seeto S, Ferenci T. 2007. Divergence and redundancy of transport and metabolic rate-yield strategies in a single Escherichia coli population. J. Bacteriol. 189:2350-2358.
    • (2007) J. Bacteriol. , vol.189 , pp. 2350-2358
    • Maharjan, R.1    Seeto, S.2    Ferenci, T.3
  • 202
    • 33746615552 scopus 로고    scopus 로고
    • Clonal adaptive radiation in a constant environment
    • Maharjan R, Seeto S, Notley-McRobb L, Ferenci T. 2006. Clonal adaptive radiation in a constant environment. Science 313:514-517.
    • (2006) Science , vol.313 , pp. 514-517
    • Maharjan, R.1    Seeto, S.2    Notley-McRobb, L.3    Ferenci, T.4
  • 204
    • 28444484984 scopus 로고    scopus 로고
    • Genomic buffering mitigates the effects of deleterious mutations in bacteria
    • Maisnier-Patin S, et al. 2005. Genomic buffering mitigates the effects of deleterious mutations in bacteria. Nat. Genet. 37:1376-1379.
    • (2005) Nat. Genet. , vol.37 , pp. 1376-1379
    • Maisnier-Patin, S.1
  • 205
    • 51549087767 scopus 로고    scopus 로고
    • Protein aggregates: An aging factor involved in cell death
    • Maisonneuve E, Ezraty B, Dukan S. 2008. Protein aggregates: an aging factor involved in cell death. J. Bacteriol. 190:6070-6075.
    • (2008) J. Bacteriol. , vol.190 , pp. 6070-6075
    • Maisonneuve, E.1    Ezraty, B.2    Dukan, S.3
  • 207
    • 0036172675 scopus 로고    scopus 로고
    • Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase
    • Makinoshima H, Nishimura A, Ishihama A. 2002. Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase. Mol. Microbiol. 43:269-279.
    • (2002) Mol. Microbiol. , vol.43 , pp. 269-279
    • Makinoshima, H.1    Nishimura, A.2    Ishihama, A.3
  • 208
    • 0031023159 scopus 로고    scopus 로고
    • Proliferation of mutators in a cell population
    • Mao EF, Lane L, Lee J, Miller JH. 1997. Proliferation of mutators in a cell population. J. Bacteriol. 179:417-422.
    • (1997) J. Bacteriol. , vol.179 , pp. 417-422
    • Mao, E.F.1    Lane, L.2    Lee, J.3    Miller, J.H.4
  • 209
    • 0035937194 scopus 로고    scopus 로고
    • The regulation of the Escherichia coli mazEF promoter involves an unusual alternating palindrome
    • Marianovsky I, Aizenman E, Engelberg-Kulka H, Glaser G. 2001. The regulation of the Escherichia coli mazEF promoter involves an unusual alternating palindrome. J. Biol. Chem. 276:5975-5984.
    • (2001) J. Biol. Chem. , vol.276 , pp. 5975-5984
    • Marianovsky, I.1    Aizenman, E.2    Engelberg-Kulka, H.3    Glaser, G.4
  • 210
    • 46849106965 scopus 로고    scopus 로고
    • Functional organisation of Escherichia coli transcriptional regulatory network
    • Martinez-Antonio A, Janga SC, Thieffry D. 2008. Functional organisation of Escherichia coli transcriptional regulatory network. J. Mol. Biol. 381:238-247.
    • (2008) J. Mol. Biol. , vol.381 , pp. 238-247
    • Martinez-Antonio, A.1    Janga, S.C.2    Thieffry, D.3
  • 211
    • 33645232390 scopus 로고    scopus 로고
    • Cryptic genetic variation is enriched for potential adaptations
    • Masel J. 2006. Cryptic genetic variation is enriched for potential adaptations. Genetics 172:1985-1991.
    • (2006) Genetics , vol.172 , pp. 1985-1991
    • Masel, J.1
  • 212
    • 0028870059 scopus 로고
    • Interspecies gene exchange in bacteria - The role of SOS and mismatch repair systems in evolution of species
    • Matic I, Rayssiguier C, Radman M. 1995. Interspecies gene exchange in bacteria - the role of SOS and mismatch repair systems in evolution of species. Cell 80:507-515.
    • (1995) Cell , vol.80 , pp. 507-515
    • Matic, I.1    Rayssiguier, C.2    Radman, M.3
  • 213
    • 0025978756 scopus 로고
    • The molecular basis of carbon-starvation-induced general resistance in Escherichia coli
    • Matin A. 1991. The molecular basis of carbon-starvation-induced general resistance in Escherichia coli. Mol. Microbiol. 5:3-10.
    • (1991) Mol. Microbiol. , vol.5 , pp. 3-10
    • Matin, A.1
  • 214
    • 0021074544 scopus 로고
    • How to carry out the adaptationist program?
    • Mayr E. 1983. How to carry out the adaptationist program? Am. Nat. 121:324-334.
    • (1983) Am. Nat. , vol.121 , pp. 324-334
    • Mayr, E.1
  • 215
    • 24044438505 scopus 로고    scopus 로고
    • Transcription-coupled repair: A complex affair
    • Mellon I. 2005. Transcription-coupled repair: a complex affair. Mutat. Res. 577:155-161.
    • (2005) Mutat. Res. , vol.577 , pp. 155-161
    • Mellon, I.1
  • 217
    • 0026522792 scopus 로고
    • Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats
    • Mikkola R, Kurland CG. 1992. Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats. Mol. Biol. Evol. 9:394-402.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 394-402
    • Mikkola, R.1    Kurland, C.G.2
  • 218
    • 0029843192 scopus 로고    scopus 로고
    • Spontaneous mutators in bacteria - Insights into pathways of mutagenesis and repair
    • Miller JH. 1996. Spontaneous mutators in bacteria - insights into pathways of mutagenesis and repair. Annu. Rev. Microbiol. 50:625-643.
    • (1996) Annu. Rev. Microbiol. , vol.50 , pp. 625-643
    • Miller, J.H.1
  • 219
    • 0032985104 scopus 로고    scopus 로고
    • Direct selection for mutators in Escherichia coli
    • Miller JH, et al. 1999. Direct selection for mutators in Escherichia coli. J. Bacteriol. 181:1576-1584.
    • (1999) J. Bacteriol. , vol.181 , pp. 1576-1584
    • Miller, J.H.1
  • 220
    • 0034437957 scopus 로고    scopus 로고
    • Temporary and permanent mutators lacking the mismatch repair system: The
    • Miller JH, et al. 2000. Temporary and permanent mutators lacking the mismatch repair system: the enhancement of mutators in cell populations. Cold Spring Harbor Symp. Quant. Biol. 65:241-252.
    • (2000) Cold Spring Harbor Symp. Quant. Biol. , vol.65 , pp. 241-252
    • Miller, J.H.1
  • 221
    • 33646596266 scopus 로고    scopus 로고
    • Genome-wide survey of transcription factors in prokaryotes reveals many bacteria-specific families not found in Archaea
    • Minezaki Y, Homma K, Nishikawa K. 2005. Genome-wide survey of transcription factors in prokaryotes reveals many bacteria-specific families not found in Archaea. DNA Res. 12:269-280.
    • (2005) DNA Res. , vol.12 , pp. 269-280
    • Minezaki, Y.1    Homma, K.2    Nishikawa, K.3
  • 223
    • 71549165759 scopus 로고    scopus 로고
    • Genetic code ambiguity: An unexpected source of proteome innovation and phenotypic diversity
    • Moura GR, Carreto LC, Santos MA. 2009. Genetic code ambiguity: an unexpected source of proteome innovation and phenotypic diversity. Curr. Opin. Microbiol. 12:631-637.
    • (2009) Curr. Opin. Microbiol. , vol.12 , pp. 631-637
    • Moura, G.R.1    Carreto, L.C.2    Santos, M.A.3
  • 224
    • 33845648557 scopus 로고    scopus 로고
    • Bacterial contingency loci: The role of simple sequence DNA repeats in bacterial adaptation
    • Moxon R, Bayliss C, Hood D. 2006. Bacterial contingency loci: the role of simple sequence DNA repeats in bacterial adaptation. Annu. Rev. Genet. 40:307-333.
    • (2006) Annu. Rev. Genet. , vol.40 , pp. 307-333
    • Moxon, R.1    Bayliss, C.2    Hood, D.3
  • 225
    • 0020590028 scopus 로고
    • HipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis
    • Moyed HS, Bertrand KP. 1983. hipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis. J. Bacteriol. 155:768-775.
    • (1983) J. Bacteriol. , vol.155 , pp. 768-775
    • Moyed, H.S.1    Bertrand, K.P.2
  • 226
    • 0022591020 scopus 로고
    • Molecular cloning and expression of hipA, a gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis
    • Moyed HS, Broderick SH. 1986. Molecular cloning and expression of hipA, a gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis. J. Bacteriol. 166:399-403.
    • (1986) J. Bacteriol. , vol.166 , pp. 399-403
    • Moyed, H.S.1    Broderick, S.H.2
  • 227
    • 77957947243 scopus 로고    scopus 로고
    • Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis
    • Mulcahy LR, Burns JL, Lory S, Lewis K. 2010. Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis. J. Bacteriol. 192:6191-6199.
    • (2010) J. Bacteriol. , vol.192 , pp. 6191-6199
    • Mulcahy, L.R.1    Burns, J.L.2    Lory, S.3    Lewis, K.4
  • 228
    • 56949100130 scopus 로고    scopus 로고
    • Deletion of the Escherichia coli uup gene encoding a protein of the ATP binding cassette superfamily affects bacterial competitiveness
    • Murat D, Goncalves L, Dassa E. 2008. Deletion of the Escherichia coli uup gene encoding a protein of the ATP binding cassette superfamily affects bacterial competitiveness. Res. Microbiol. 159:671-677.
    • (2008) Res. Microbiol. , vol.159 , pp. 671-677
    • Murat, D.1    Goncalves, L.2    Dassa, E.3
  • 229
    • 0028911404 scopus 로고
    • Dynamics of IS-related genetic rearrangements in resting Escherichia coli K-12
    • Naas T, Blot M, Fitch WM, Arber W. 1995. Dynamics of IS-related genetic rearrangements in resting Escherichia coli K-12. Mol. Biol. Evol. 12:198-207.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 198-207
    • Naas, T.1    Blot, M.2    Fitch, W.M.3    Arber, W.4
  • 230
    • 45749093808 scopus 로고    scopus 로고
    • Quorum sensing influences Vibrio harveyi growth rates in a manner not fully accounted for by the marker effect of bioluminescence
    • doi:10.1371/journal.pone.0001671
    • Nackerdien ZE, Keynan A, Bassler BL, Lederberg J, Thaler DS. 2008. Quorum sensing influences Vibrio harveyi growth rates in a manner not fully accounted for by the marker effect of bioluminescence. PLoS One 3:e1671. doi:10.1371/journal.pone.0001671.
    • (2008) PLoS One , vol.3
    • Nackerdien, Z.E.1    Keynan, A.2    Bassler, B.L.3    Lederberg, J.4    Thaler, D.S.5
  • 231
    • 0031438048 scopus 로고    scopus 로고
    • Biodiversity enhances ecosystem reliability
    • Naeem S, Li S. 1997. Biodiversity enhances ecosystem reliability. Nature 390:507-509.
    • (1997) Nature , vol.390 , pp. 507-509
    • Naeem, S.1    Li, S.2
  • 232
    • 41549140156 scopus 로고    scopus 로고
    • Cyclic AMP-dependent catabolite repression is the dominant control mechanism of metabolic fluxes under glucose limitation in Escherichia coli
    • Nanchen A, Schicker A, Revelles O, Sauer U. 2008. Cyclic AMP-dependent catabolite repression is the dominant control mechanism of metabolic fluxes under glucose limitation in Escherichia coli. J. Bacteriol. 190:2323-2330.
    • (2008) J. Bacteriol. , vol.190 , pp. 2323-2330
    • Nanchen, A.1    Schicker, A.2    Revelles, O.3    Sauer, U.4
  • 234
    • 0028829643 scopus 로고
    • Response of guanosine tetraphosphate to glucose fluctuations in fed-batch cultivations of Escherichia coli
    • Neubauer P, Ahman M, Tornkvist M, Larsson G, Enfors SO. 1995. Response of guanosine tetraphosphate to glucose fluctuations in fed-batch cultivations of Escherichia coli. J. Biotechnol. 43:195-204.
    • (1995) J. Biotechnol. , vol.43 , pp. 195-204
    • Neubauer, P.1    Ahman, M.2    Tornkvist, M.3    Larsson, G.4    Enfors, S.O.5
  • 235
    • 78049441051 scopus 로고    scopus 로고
    • Frail hypotheses in evolutionary biology
    • doi:10.1371/journal.pgen.1001067
    • Ninio J. 2010. Frail hypotheses in evolutionary biology. PLoS Genet. 6:e1001067. doi:10.1371/journal.pgen.1001067.
    • (2010) PLoS Genet. , vol.6
    • Ninio, J.1
  • 236
    • 0025935050 scopus 로고
    • Transient mutators: A semiquantitative analysis of the influence of translation and transcription errors on mutation rates
    • Ninio J. 1991. Transient mutators: a semiquantitative analysis of the influence of translation and transcription errors on mutation rates. Genetics 129:957-962.
    • (1991) Genetics , vol.129 , pp. 957-962
    • Ninio, J.1
  • 237
    • 56949101052 scopus 로고    scopus 로고
    • The diffusive influx and carrier efflux have a strong effect on the bistability of the lac operon in Escherichia coli
    • Noel JT, Pilyugin SS, Narang A. 2009. The diffusive influx and carrier efflux have a strong effect on the bistability of the lac operon in Escherichia coli. J. Theor. Biol. 256:14-28.
    • (2009) J. Theor. Biol. , vol.256 , pp. 14-28
    • Noel, J.T.1    Pilyugin, S.S.2    Narang, A.3
  • 238
    • 0029924025 scopus 로고    scopus 로고
    • Induction of RpoS-dependent functions in glucose-limited continuous culture: What level of nutrient limitation induces the stationary phase of Escherichia coli?
    • Notley L, Ferenci T. 1996. Induction of RpoS-dependent functions in glucose-limited continuous culture: what level of nutrient limitation induces the stationary phase of Escherichia coli? J. Bacteriol. 178:1465-1468.
    • (1996) J. Bacteriol. , vol.178 , pp. 1465-1468
    • Notley, L.1    Ferenci, T.2
  • 239
    • 0030839962 scopus 로고    scopus 로고
    • The relationship between external glucose concentration and cAMP levels inside Escherichia coli - Implications for models of phosphotransferase-mediated regulation of adenylate cyclase
    • Notley-McRobb L, Death A, Ferenci T. 1997. The relationship between external glucose concentration and cAMP levels inside Escherichia coli - implications for models of phosphotransferase-mediated regulation of adenylate cyclase. Microbiology 143:1909-1918.
    • (1997) Microbiology , vol.143 , pp. 1909-1918
    • Notley-McRobb, L.1    Death, A.2    Ferenci, T.3
  • 240
    • 0036860714 scopus 로고    scopus 로고
    • Enrichment and elimination of mutY mutators in Escherichia coli populations
    • Notley-McRobb L, Seeto S, Ferenci T. 2002. Enrichment and elimination of mutY mutators in Escherichia coli populations. Genetics 162:1055-1062.
    • (2002) Genetics , vol.162 , pp. 1055-1062
    • Notley-McRobb, L.1    Seeto, S.2    Ferenci, T.3
  • 241
    • 0037461340 scopus 로고    scopus 로고
    • The influence of cellular physiology on the initiation of mutational pathways in Escherichia coli populations
    • Notley-McRobb L, Seeto S, Ferenci T. 2003. The influence of cellular physiology on the initiation of mutational pathways in Escherichia coli populations. Proc. R. Soc. Lond. Ser. B Biol. Sci. 270:843-848.
    • (2003) Proc. R. Soc. Lond. Ser. B Biol. Sci. , vol.270 , pp. 843-848
    • Notley-McRobb, L.1    Seeto, S.2    Ferenci, T.3
  • 242
    • 78651129696 scopus 로고
    • Hyper-production of beta-galactosidase by Escherichia coli bacteria
    • Novick A, Horiuchi T. 1961. Hyper-production of beta-galactosidase by Escherichia coli bacteria. Cold Spring Harbor Symp. Quant. Biol. 26:239-245.
    • (1961) Cold Spring Harbor Symp. Quant. Biol. , vol.26 , pp. 239-245
    • Novick, A.1    Horiuchi, T.2
  • 243
    • 9244230099 scopus 로고    scopus 로고
    • Stationary-phase physiology
    • Nystrom T. 2004. Stationary-phase physiology. Annu. Rev. Microbiol. 58:161-181.
    • (2004) Annu. Rev. Microbiol. , vol.58 , pp. 161-181
    • Nystrom, T.1
  • 245
    • 18844413446 scopus 로고    scopus 로고
    • Structural insights into translational fidelity
    • Ogle JM, Ramakrishnan V. 2005. Structural insights into translational fidelity. Annu. Rev. Biochem. 74:129-177.
    • (2005) Annu. Rev. Biochem. , vol.74 , pp. 129-177
    • Ogle, J.M.1    Ramakrishnan, V.2
  • 246
    • 0034685940 scopus 로고    scopus 로고
    • High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection
    • Oliver A, Canton R, Campo P, Baquero F, Blazquez J. 2000. High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288:1251-1253.
    • (2000) Science , vol.288 , pp. 1251-1253
    • Oliver, A.1    Canton, R.2    Campo, P.3    Baquero, F.4    Blazquez, J.5
  • 247
    • 67651119869 scopus 로고    scopus 로고
    • Fitness and its role in evolutionary genetics
    • Orr HA. 2009. Fitness and its role in evolutionary genetics. Nat. Rev. Genet. 10:531-539.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 531-539
    • Orr, H.A.1
  • 248
    • 80054069179 scopus 로고    scopus 로고
    • A comprehensive genome-scale reconstruction of Escherichia coli metabolism - 2011
    • Orth JD, et al. 2011. A comprehensive genome-scale reconstruction of Escherichia coli metabolism - 2011. Mol. Syst. Biol. 7:535.
    • (2011) Mol. Syst. Biol. , vol.7 , pp. 535
    • Orth, J.D.1
  • 249
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace NR. 1997. A molecular view of microbial diversity and the biosphere. Science 276:734-740.
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 250
    • 82055164373 scopus 로고    scopus 로고
    • Universal platform for quantitative analysis of DNA transposition
    • Pajunen MI, et al. 2010. Universal platform for quantitative analysis of DNA transposition. Mobile DNA 1:24.
    • (2010) Mobile DNA , vol.1 , pp. 24
    • Pajunen, M.I.1
  • 251
    • 33744722488 scopus 로고    scopus 로고
    • Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient
    • Palchevskiy V, Finkel SE. 2006. Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient. J. Bacteriol. 188:3902-3910.
    • (2006) J. Bacteriol. , vol.188 , pp. 3902-3910
    • Palchevskiy, V.1    Finkel, S.E.2
  • 252
    • 0033616661 scopus 로고    scopus 로고
    • Genomic evolution during a 10,000-generation experiment with bacteria
    • Papadopoulos D, et al. 1999. Genomic evolution during a 10,000-generation experiment with bacteria. Proc. Natl. Acad. Sci. U. S. A. 96:3807-3812.
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 3807-3812
    • Papadopoulos, D.1
  • 253
    • 80052031934 scopus 로고    scopus 로고
    • Systems-biology approaches for predicting genomic evolution
    • Papp B, Notebaart RA, Pal C. 2011. Systems-biology approaches for predicting genomic evolution. Nat. Rev. Genet. 12:591-602.
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 591-602
    • Papp, B.1    Notebaart, R.A.2    Pal, C.3
  • 254
    • 59849085334 scopus 로고    scopus 로고
    • Cell-to-cell signalling during pathogenesis
    • Parker CT, Sperandio V. 2009. Cell-to-cell signalling during pathogenesis. Cell. Microbiol. 11:363-369.
    • (2009) Cell. Microbiol. , vol.11 , pp. 363-369
    • Parker, C.T.1    Sperandio, V.2
  • 255
    • 0024722501 scopus 로고
    • Errors and alternatives in reading the universal genetic code
    • Parker J. 1989. Errors and alternatives in reading the universal genetic code. Microbiol. Rev. 53:273-298.
    • (1989) Microbiol. Rev. , vol.53 , pp. 273-298
    • Parker, J.1
  • 256
    • 33748769255 scopus 로고    scopus 로고
    • Escherichia coli transcriptome dynamics during the transition from anaerobic to aerobic conditions
    • Partridge JD, Scott C, Tang Y, Poole RK, Green J. 2006. Escherichia coli transcriptome dynamics during the transition from anaerobic to aerobic conditions. J. Biol. Chem. 281:27806-27815.
    • (2006) J. Biol. Chem. , vol.281 , pp. 27806-27815
    • Partridge, J.D.1    Scott, C.2    Tang, Y.3    Poole, R.K.4    Green, J.5
  • 259
    • 45149086183 scopus 로고    scopus 로고
    • Nongenetic individuality in the host-phage interaction
    • doi:10.1371/journal.pbio.0060120
    • Pearl S, Gabay C, Kishony R, Oppenheim A, Balaban NQ. 2008. Nongenetic individuality in the host-phage interaction. PLoS Biol. 6:957-964. doi:10.1371/journal.pbio.0060120.
    • (2008) PLoS Biol. , vol.6 , pp. 957-964
    • Pearl, S.1    Gabay, C.2    Kishony, R.3    Oppenheim, A.4    Balaban, N.Q.5
  • 260
    • 34249789279 scopus 로고    scopus 로고
    • Spontaneous DNA breakage in single living Escherichia coli cells
    • Pennington JM, Rosenberg SM. 2007. Spontaneous DNA breakage in single living Escherichia coli cells. Nat. Genet. 39:797-802.
    • (2007) Nat. Genet. , vol.39 , pp. 797-802
    • Pennington, J.M.1    Rosenberg, S.M.2
  • 261
    • 78649524425 scopus 로고    scopus 로고
    • Heterogeneous response to a quorum-sensing signal in the luminescence of individual Vibrio fischeri
    • doi:10.1371/journal.pone.0015473
    • Pérez PD, Hagen SJ. 2010. Heterogeneous response to a quorum-sensing signal in the luminescence of individual Vibrio fischeri. PLoS One 5:e15473. doi:10.1371/journal.pone.0015473.
    • (2010) PLoS One , vol.5
    • Pérez, P.D.1    Hagen, S.J.2
  • 262
    • 34547924819 scopus 로고    scopus 로고
    • Adaptive mutations in bacteria: High rate and small effects
    • Perfeito L, Fernandes L, Mota C, Gordo I. 2007. Adaptive mutations in bacteria: high rate and small effects. Science 317:813-815.
    • (2007) Science , vol.317 , pp. 813-815
    • Perfeito, L.1    Fernandes, L.2    Mota, C.3    Gordo, I.4
  • 264
    • 15544383067 scopus 로고    scopus 로고
    • The amplification model for adaptive mutation: Simulations and analysis
    • Pettersson ME, Andersson DI, Roth JR, Berg OG. 2005. The amplification model for adaptive mutation: simulations and analysis. Genetics 169:1105-1115.
    • (2005) Genetics , vol.169 , pp. 1105-1115
    • Pettersson, M.E.1    Andersson, D.I.2    Roth, J.R.3    Berg, O.G.4
  • 265
    • 65449142090 scopus 로고    scopus 로고
    • Evolution of new gene functions: Simulation and analysis of the amplification model
    • Pettersson ME, Sun S, Andersson DI, Berg OG. 2009. Evolution of new gene functions: simulation and analysis of the amplification model. Genetica 135:309-324.
    • (2009) Genetica , vol.135 , pp. 309-324
    • Pettersson, M.E.1    Sun, S.2    Andersson, D.I.3    Berg, O.G.4
  • 266
    • 34548769341 scopus 로고    scopus 로고
    • Evolution of global regulatory networks during a long-term experiment with Escherichia coli
    • Philippe N, Crozat E, Lenski RE, Schneider D. 2007. Evolution of global regulatory networks during a long-term experiment with Escherichia coli. Bioessays 29:846-860.
    • (2007) Bioessays , vol.29 , pp. 846-860
    • Philippe, N.1    Crozat, E.2    Lenski, R.E.3    Schneider, D.4
  • 267
    • 79951810051 scopus 로고    scopus 로고
    • Ecological succession in long-term experimentally evolved biofilms produces synergistic communities
    • Poltak SR, Cooper VS. 2011. Ecological succession in long-term experimentally evolved biofilms produces synergistic communities. ISME J. 5:369-378.
    • (2011) ISME J. , vol.5 , pp. 369-378
    • Poltak, S.R.1    Cooper, V.S.2
  • 268
    • 70349414424 scopus 로고    scopus 로고
    • Evolution of diversity in spatially structured Escherichia coli populations
    • Ponciano JM, La HJ, Joyce P, Forney LJ. 2009. Evolution of diversity in spatially structured Escherichia coli populations. Appl. Environ. Microbiol. 75:6047-6054.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 6047-6054
    • Ponciano, J.M.1    La, H.J.2    Joyce, P.3    Forney, L.J.4
  • 269
    • 24944477416 scopus 로고    scopus 로고
    • A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation
    • Ponder RG, Fonville NC, Rosenberg SM. 2005. A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation. Mol. Cell 19:791-804.
    • (2005) Mol. Cell , vol.19 , pp. 791-804
    • Ponder, R.G.1    Fonville, N.C.2    Rosenberg, S.M.3
  • 271
    • 33745920513 scopus 로고    scopus 로고
    • Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae
    • Prudhomme M, Attaiech L, Sanchez G, Martin B, Claverys JP. 2006. Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae. Science 313:89-92.
    • (2006) Science , vol.313 , pp. 89-92
    • Prudhomme, M.1    Attaiech, L.2    Sanchez, G.3    Martin, B.4    Claverys, J.P.5
  • 272
    • 0032474853 scopus 로고    scopus 로고
    • Adaptive radiation in a heterogeneous environment
    • Rainey PB, Travisano M. 1998. Adaptive radiation in a heterogeneous environment. Nature 394:69-72.
    • (1998) Nature , vol.394 , pp. 69-72
    • Rainey, P.B.1    Travisano, M.2
  • 273
    • 0024469392 scopus 로고
    • The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants
    • Rayssiguier C, Thaler DS, Radman M. 1989. The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants. Nature 342:396-401.
    • (1989) Nature , vol.342 , pp. 396-401
    • Rayssiguier, C.1    Thaler, D.S.2    Radman, M.3
  • 274
    • 77955876041 scopus 로고    scopus 로고
    • Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination
    • Reams AB, Kofoid E, Savageau M, Roth JR. 2010. Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination. Genetics 184:1077-1094.
    • (2010) Genetics , vol.184 , pp. 1077-1094
    • Reams, A.B.1    Kofoid, E.2    Savageau, M.3    Roth, J.R.4
  • 275
    • 1942457367 scopus 로고    scopus 로고
    • Gene amplification involves site-specific short homology-independent illegitimate recombination in Acinetobacter sp. strain ADP1
    • Reams AB, Neidle EL. 2004. Gene amplification involves site-specific short homology-independent illegitimate recombination in Acinetobacter sp. strain ADP1. J. Mol. Biol. 338:643-656.
    • (2004) J. Mol. Biol. , vol.338 , pp. 643-656
    • Reams, A.B.1    Neidle, E.L.2
  • 276
    • 78651475724 scopus 로고    scopus 로고
    • Heterogeneity of Escherichia coli population by respiratory activity and membrane potential of cells during growth and long-term starvation
    • Rezaeinejad S, Ivanov V. 2011. Heterogeneity of Escherichia coli population by respiratory activity and membrane potential of cells during growth and long-term starvation. Microbiol. Res. 166:129-135.
    • (2011) Microbiol. Res. , vol.166 , pp. 129-135
    • Rezaeinejad, S.1    Ivanov, V.2
  • 277
    • 0034997722 scopus 로고    scopus 로고
    • Mismatch repair and the regulation of phase variation in Neisseria meningitidis
    • Richardson AR, Stojiljkovic I. 2001. Mismatch repair and the regulation of phase variation in Neisseria meningitidis. Mol. Microbiol. 40:645-655.
    • (2001) Mol. Microbiol. , vol.40 , pp. 645-655
    • Richardson, A.R.1    Stojiljkovic, I.2
  • 278
    • 0028827680 scopus 로고
    • Entry of Escherichia coli into stationary phase is indicated by endogenous and exogenous accumulation of nucleobases
    • Rinas U, Hellmuth K, Kang RJ, Seeger A, Schlieker H. 1995. Entry of Escherichia coli into stationary phase is indicated by endogenous and exogenous accumulation of nucleobases. Appl. Environ. Microbiol. 61:4147-4151.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 4147-4151
    • Rinas, U.1    Hellmuth, K.2    Kang, R.J.3    Seeger, A.4    Schlieker, H.5
  • 279
    • 77951129749 scopus 로고    scopus 로고
    • Pre-dispositions and epigenetic inheritance in the Escherichia coli lactose operon bistable switch
    • Robert L, et al. 2010. Pre-dispositions and epigenetic inheritance in the Escherichia coli lactose operon bistable switch. Mol. Syst. Biol. 6:357.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 357
    • Robert, L.1
  • 280
    • 40549114945 scopus 로고    scopus 로고
    • Host responses influence on the induction of lambda prophage
    • Rokney A, et al. 2008. Host responses influence on the induction of lambda prophage. Mol. Microbiol. 68:29-36.
    • (2008) Mol. Microbiol. , vol.68 , pp. 29-36
    • Rokney, A.1
  • 281
    • 0031468083 scopus 로고    scopus 로고
    • Gene amplification and genomic plasticity in prokaryotes
    • Romero D, Palacios R. 1997. Gene amplification and genomic plasticity in prokaryotes. Annu. Rev. Genet. 31:91-111.
    • (1997) Annu. Rev. Genet. , vol.31 , pp. 91-111
    • Romero, D.1    Palacios, R.2
  • 282
    • 0028094645 scopus 로고
    • Microbial evolution in a simple unstructured environment: Genetic differentiation in Escherichia coli
    • Rosenzweig RF, Sharp RR, Treves DS, Adams J. 1994. Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli. Genetics 137:903-917.
    • (1994) Genetics , vol.137 , pp. 903-917
    • Rosenzweig, R.F.1    Sharp, R.R.2    Treves, D.S.3    Adams, J.4
  • 283
    • 77955452979 scopus 로고    scopus 로고
    • Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence
    • Rotem E, et al. 2010. Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence. Proc. Natl. Acad. Sci. U. S. A. 107:12541-12546.
    • (2010) Proc. Natl. Acad. Sci. U. S. A. , vol.107 , pp. 12541-12546
    • Rotem, E.1
  • 284
    • 0033118420 scopus 로고    scopus 로고
    • An investigation into the phenomenon of cross-protection in Escherichia coli O157:H7
    • Rowe MT, Kirk R. 1999. An investigation into the phenomenon of cross-protection in Escherichia coli O157:H7. Food Microbiol. 16:157-164.
    • (1999) Food Microbiol. , vol.16 , pp. 157-164
    • Rowe, M.T.1    Kirk, R.2
  • 285
    • 0037172667 scopus 로고    scopus 로고
    • Fitness effects of fixed beneficial mutations in microbial populations
    • Rozen DE, DE Visser J, Gerrish PJ. 2002. Fitness effects of fixed beneficial mutations in microbial populations. Curr. Biol. 12:1040-1045.
    • (2002) Curr. Biol. , vol.12 , pp. 1040-1045
    • Rozen, D.E.1    De Visser, J.2    Gerrish, P.J.3
  • 287
    • 55949136718 scopus 로고    scopus 로고
    • Quality control despite mistranslation caused by an ambiguous genetic code
    • Ruan B, et al. 2008. Quality control despite mistranslation caused by an ambiguous genetic code. Proc. Natl. Acad. Sci. U. S. A. 105:16502-16507.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 16502-16507
    • Ruan, B.1
  • 288
    • 77049131005 scopus 로고
    • Adaptation to use lactose in Escherichia coli
    • Ryan FJ. 1952. Adaptation to use lactose in Escherichia coli. J. Gen. Microbiol. 7:69-88.
    • (1952) J. Gen. Microbiol. , vol.7 , pp. 69-88
    • Ryan, F.J.1
  • 289
    • 34547770887 scopus 로고    scopus 로고
    • Causes and consequences of DNA repair activity modulation during stationary phase in Escherichia coli
    • Saint-Ruf C, Sopta JPM, Matic I. 2007. Causes and consequences of DNA repair activity modulation during stationary phase in Escherichia coli. Crit. Rev. Biochem. Mol. Biol. 42:259-270.
    • (2007) Crit. Rev. Biochem. Mol. Biol. , vol.42 , pp. 259-270
    • Saint-Ruf, C.1    Sopta, J.P.M.2    Matic, I.3
  • 290
    • 5144223827 scopus 로고    scopus 로고
    • Stress and survival of aging Escherichia coli rpoS colonies
    • Saint-Ruf C, Taddei FO, Matic I. 2004. Stress and survival of aging Escherichia coli rpoS colonies. Genetics 168:541-546.
    • (2004) Genetics , vol.168 , pp. 541-546
    • Saint-Ruf, C.1    Taddei, F.O.2    Matic, I.3
  • 292
    • 67651204792 scopus 로고    scopus 로고
    • Bacterial gene amplification: Implications for the evolution of antibiotic resistance
    • Sandegren L, Andersson DI. 2009. Bacterial gene amplification: implications for the evolution of antibiotic resistance. Nat. Rev. Microbiol. 7:578-588.
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 578-588
    • Sandegren, L.1    Andersson, D.I.2
  • 293
    • 0037384574 scopus 로고    scopus 로고
    • Global gene expression in Escherichia coli biofilms
    • Schembri MA, Kjaergaard K, Klemm P. 2003. Global gene expression in Escherichia coli biofilms. Mol. Microbiol. 48:253-267.
    • (2003) Mol. Microbiol. , vol.48 , pp. 253-267
    • Schembri, M.A.1    Kjaergaard, K.2    Klemm, P.3
  • 294
    • 34250900335 scopus 로고    scopus 로고
    • Timeline - Lessons from 50 years of SOS DNA-damage-induced mutagenesis
    • Schlacher K, Goodman MF. 2007. Timeline - lessons from 50 years of SOS DNA-damage-induced mutagenesis. Nat. Rev. Mol. Cell Biol. 8:587-594.
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 587-594
    • Schlacher, K.1    Goodman, M.F.2
  • 295
    • 33747436591 scopus 로고    scopus 로고
    • Persisters: A distinct physiological state of E. coli
    • doi:10.1186/1471-2180-6-53
    • Shah D, Zhang Z, Khodursky A, Kaldalu N, Kurg K, Lewis K. 2006. Persisters: a distinct physiological state of E. coli. BMC Microbiol. 6:53. doi:10.1186/1471-2180-6-53.
    • (2006) BMC Microbiol. , vol.6 , pp. 53
    • Shah, D.1    Zhang, Z.2    Khodursky, A.3    Kaldalu, N.4    Kurg, K.5    Lewis, K.6
  • 296
    • 0031725610 scopus 로고    scopus 로고
    • Thinking about bacterial populations as multicellular organisms
    • Shapiro JA. 1998. Thinking about bacterial populations as multicellular organisms. Annu. Rev. Microbiol. 52:81-104.
    • (1998) Annu. Rev. Microbiol. , vol.52 , pp. 81-104
    • Shapiro, J.A.1
  • 297
    • 12644263413 scopus 로고    scopus 로고
    • Inorganic polyphosphate and the induction of rpoS expression
    • Shiba T, et al. 1997. Inorganic polyphosphate and the induction of rpoS expression. Proc. Natl. Acad. Sci. U. S. A. 94:11210-11215.
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 11210-11215
    • Shiba, T.1
  • 298
    • 34547405640 scopus 로고    scopus 로고
    • Evolution of microorganism locomotion induced by starvation
    • 10.1103/PhysRevE.76.011919
    • Sibona GJ. 2007. Evolution of microorganism locomotion induced by starvation. Phys. Rev. E 76:1919. 10.1103/PhysRevE.76.011919.
    • (2007) Phys. Rev. E , vol.76 , pp. 1919
    • Sibona, G.J.1
  • 299
    • 77955155615 scopus 로고    scopus 로고
    • Noise and robustness in prokaryotic regulatory networks
    • Silva-Rocha R, de Lorenzo V. 2010. Noise and robustness in prokaryotic regulatory networks. Annu. Rev. Microbiol. 64:257-275.
    • (2010) Annu. Rev. Microbiol. , Issue.64 , pp. 257-275
    • Silva-Rocha, R.1    De Lorenzo, V.2
  • 300
    • 0041533023 scopus 로고
    • Phase variation in Salmonella: Genetic analysis of a recombinational switch
    • Silverman M, Zieg J, Hilmen M, Simon M. 1979. Phase variation in Salmonella: genetic analysis of a recombinational switch. Proc. Natl. Acad. Sci. U. S. A. 76:391-395.
    • (1979) Proc. Natl. Acad. Sci. U. S. A. , vol.76 , pp. 391-395
    • Silverman, M.1    Zieg, J.2    Hilmen, M.3    Simon, M.4
  • 301
    • 77955969267 scopus 로고    scopus 로고
    • Increased mutation frequency in redox-impaired Escherichia coli due to RelA- and RpoS-mediated repression of DNA repair
    • Singh A, Karimpour-Fard A, Gill RT. 2010. Increased mutation frequency in redox-impaired Escherichia coli due to RelA- and RpoS-mediated repression of DNA repair. Appl. Environ. Microbiol. 76:5463-5470.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 5463-5470
    • Singh, A.1    Karimpour-Fard, A.2    Gill, R.T.3
  • 302
    • 33645073688 scopus 로고    scopus 로고
    • Phenotypic variation in bacteria: The role of feedback regulation
    • Smits WK, Kuipers OP, Veening JW. 2006. Phenotypic variation in bacteria: the role of feedback regulation. Nat. Rev. Microbiol. 4:259-271.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 259-271
    • Smits, W.K.1    Kuipers, O.P.2    Veening, J.W.3
  • 304
    • 0024438949 scopus 로고
    • Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources
    • Sonti RV, Roth JR. 1989. Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources. Genetics 123:19-28.
    • (1989) Genetics , vol.123 , pp. 19-28
    • Sonti, R.V.1    Roth, J.R.2
  • 305
    • 0141560324 scopus 로고    scopus 로고
    • Regulation cascade of flagellar expression in Gram-negative bacteria
    • Soutourina OA, Bertin PN. 2003. Regulation cascade of flagellar expression in Gram-negative bacteria. FEMS Microbiol. Rev. 27:505-523.
    • (2003) FEMS Microbiol. Rev. , vol.27 , pp. 505-523
    • Soutourina, O.A.1    Bertin, P.N.2
  • 306
    • 53449097801 scopus 로고    scopus 로고
    • Strain variation in ppGpp concentration and RpoS levels in laboratory strains of Escherichia coli K-12
    • Spira B, Hu X, Ferenci T. 2008. Strain variation in ppGpp concentration and RpoS levels in laboratory strains of Escherichia coli K-12. Microbiology 154:2887-2895.
    • (2008) Microbiology , vol.154 , pp. 2887-2895
    • Spira, B.1    Hu, X.2    Ferenci, T.3
  • 307
    • 0031705579 scopus 로고    scopus 로고
    • Mechanism and control of interspecies recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions
    • Stambuk S, Radman M. 1998. Mechanism and control of interspecies recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions. Genetics 150:533-542.
    • (1998) Genetics , vol.150 , pp. 533-542
    • Stambuk, S.1    Radman, M.2
  • 308
    • 0018165062 scopus 로고
    • Uvm mutants of Escherichia coli K-12 deficient in UV Mutagenesis. 1. Isolation of uvm mutants and their phenotypical characterization in DNA-repair and mutagenesis
    • Steinborn G. 1978. Uvm mutants of Escherichia coli K-12 deficient in UV Mutagenesis. 1. Isolation of uvm mutants and their phenotypical characterization in DNA-repair and mutagenesis. Mol. Gen. Genet. 165:87-93.
    • (1978) Mol. Gen. Genet. , vol.165 , pp. 87-93
    • Steinborn, G.1
  • 309
    • 18044372096 scopus 로고    scopus 로고
    • Senescence: Even bacteria get old
    • Stephens C. 2005. Senescence: even bacteria get old. Curr. Biol. 15:R308-R310.
    • (2005) Curr. Biol. , vol.15
    • Stephens, C.1
  • 310
    • 59849107271 scopus 로고    scopus 로고
    • Is genetic evolution predictable?
    • Stern DL, Orgogozo V. 2009. Is genetic evolution predictable? Science 323:746-751.
    • (2009) Science , vol.323 , pp. 746-751
    • Stern, D.L.1    Orgogozo, V.2
  • 311
    • 13944272143 scopus 로고    scopus 로고
    • Aging and death in an organism that reproduces by morphologically symmetric division
    • doi:10.1371/journal.pbio.0030045
    • Stewart EJ, Madden R, Paul G, Taddei F. 2005. Aging and death in an organism that reproduces by morphologically symmetric division. PLoS Biol. 3:e45. doi:10.1371/journal.pbio.0030045.
    • (2005) PLoS Biol. , vol.3
    • Stewart, E.J.1    Madden, R.2    Paul, G.3    Taddei, F.4
  • 313
    • 77954417926 scopus 로고    scopus 로고
    • RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV
    • Storvik KAM, Foster PL. 2010. RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV. J. Bacteriol. 192:3639-3644.
    • (2010) J. Bacteriol. , vol.192 , pp. 3639-3644
    • Storvik, K.A.M.1    Foster, P.L.2
  • 315
    • 58549110229 scopus 로고    scopus 로고
    • Determination of cell fate selection during phage lambda infection
    • St-Pierre F, Endy D. 2008. Determination of cell fate selection during phage lambda infection. Proc. Natl. Acad. Sci. U. S. A. 105:20705-20710.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 20705-20710
    • St-Pierre, F.1    Endy, D.2
  • 316
    • 32044435597 scopus 로고    scopus 로고
    • To kill but not be killed: A delicate balance
    • Stragier P. 2006. To kill but not be killed: a delicate balance. Cell 124:461-463.
    • (2006) Cell , vol.124 , pp. 461-463
    • Stragier, P.1
  • 317
    • 70349542895 scopus 로고    scopus 로고
    • Interspecies chemical communication in bacterial development
    • Straight PD, Kolter R. 2009. Interspecies chemical communication in bacterial development. Annu. Rev. Microbiol. 63:99-118.
    • (2009) Annu. Rev. Microbiol. , vol.63 , pp. 99-118
    • Straight, P.D.1    Kolter, R.2
  • 318
    • 22644438135 scopus 로고    scopus 로고
    • Polyphosphate kinase regulates error-prone replication by DNA polymerase IV in Escherichia coli
    • Stumpf JD, Foster PL. 2005. Polyphosphate kinase regulates error-prone replication by DNA polymerase IV in Escherichia coli. Mol. Microbiol. 57:751-761.
    • (2005) Mol. Microbiol. , vol.57 , pp. 751-761
    • Stumpf, J.D.1    Foster, P.L.2
  • 319
    • 0242331640 scopus 로고    scopus 로고
    • Fitness consequences of a regulatory polymorphism in a seasonal environment
    • 2134994100
    • Suiter AM, Banziger O, Dean AM. 2003. Fitness consequences of a regulatory polymorphism in a seasonal environment. Proc. Natl. Acad. Sci. U. S. A.:2134994100.
    • (2003) Proc. Natl. Acad. Sci. U. S. A.
    • Suiter, A.M.1    Banziger, O.2    Dean, A.M.3
  • 320
    • 70350440304 scopus 로고    scopus 로고
    • A novel insertion sequence derepresses efflux pump expression and preadapts Pseudomonas putida S12 for extreme solvent stress
    • Sun X, Dennis JJ. 2009. A novel insertion sequence derepresses efflux pump expression and preadapts Pseudomonas putida S12 for extreme solvent stress. J. Bacteriol. 191:6773-6777.
    • (2009) J. Bacteriol. , vol.191 , pp. 6773-6777
    • Sun, X.1    Dennis, J.J.2
  • 322
    • 0036790975 scopus 로고    scopus 로고
    • Intrinsic and extrinsic contributions to stochasticity in gene expression
    • Swain PS, Elowitz MB, Siggia ED. 2002. Intrinsic and extrinsic contributions to stochasticity in gene expression. Proc. Natl. Acad. Sci. U. S. A. 99:12795-12800.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 12795-12800
    • Swain, P.S.1    Elowitz, M.B.2    Siggia, E.D.3
  • 324
    • 0033529763 scopus 로고    scopus 로고
    • UmuD′ C-2 is an error-prone DNA polymerase, Escherichia coli pol V
    • Tang MJ, et al. 1999. UmuD′ C-2 is an error-prone DNA polymerase, Escherichia coli pol V. Proc. Natl. Acad. Sci. U. S. A. 96:8919-8924.
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 8919-8924
    • Tang, M.J.1
  • 325
    • 77955102352 scopus 로고    scopus 로고
    • Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells
    • Taniguchi Y, et al. 2010. Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells. Science 329:533-538.
    • (2010) Science , vol.329 , pp. 533-538
    • Taniguchi, Y.1
  • 326
    • 22544444628 scopus 로고    scopus 로고
    • A DNA polymerase V homologue encoded by TOL plasmid pWW0 confers evolutionary fitness on Pseudomonas putida under conditions of environmental stress
    • Tark M, et al. 2005. A DNA polymerase V homologue encoded by TOL plasmid pWW0 confers evolutionary fitness on Pseudomonas putida under conditions of environmental stress. J. Bacteriol. 187:5203-5213.
    • (2005) J. Bacteriol. , vol.187 , pp. 5203-5213
    • Tark, M.1
  • 327
    • 0032984789 scopus 로고    scopus 로고
    • Growth rate related concentration changes of the starvation response regulators sigma(S) and ppGpp in glucose-limited fed-batch and continuous cultures of Escherichia coli
    • Teich A, et al. 1999. Growth rate related concentration changes of the starvation response regulators sigma(S) and ppGpp in glucose-limited fed-batch and continuous cultures of Escherichia coli. Biotechnol. Prog. 15:123-129.
    • (1999) Biotechnol. Prog. , vol.15 , pp. 123-129
    • Teich, A.1
  • 328
    • 2542478884 scopus 로고    scopus 로고
    • Evolutionary significance of stress-induced mutagenesis in bacteria
    • Tenaillon O, Denamur E, Matic I. 2004. Evolutionary significance of stress-induced mutagenesis in bacteria. Trends Microbiol. 12:264-269.
    • (2004) Trends Microbiol. , vol.12 , pp. 264-269
    • Tenaillon, O.1    Denamur, E.2    Matic, I.3
  • 329
    • 0035118974 scopus 로고    scopus 로고
    • Second-order selection in bacterial evolution: Selection acting on mutation and recombination rates in the course of adaptation
    • Tenaillon O, Taddei F, Radman M, Matic I. 2001. Second-order selection in bacterial evolution: selection acting on mutation and recombination rates in the course of adaptation. Res. Microbiol. 152:11-16.
    • (2001) Res. Microbiol. , vol.152 , pp. 11-16
    • Tenaillon, O.1    Taddei, F.2    Radman, M.3    Matic, I.4
  • 330
    • 0021153579 scopus 로고
    • Gene amplification in the lac region of E. coli
    • Tlsty TD, Albertini AM, Miller JH. 1984. Gene amplification in the lac region of E. coli. Cell 37:217-224.
    • (1984) Cell , vol.37 , pp. 217-224
    • Tlsty, T.D.1    Albertini, A.M.2    Miller, J.H.3
  • 331
    • 66649132872 scopus 로고    scopus 로고
    • Chaperonin overexpression promotes genetic variation and enzyme evolution
    • Tokuriki N, Tawfik DS. 2009. Chaperonin overexpression promotes genetic variation and enzyme evolution. Nature 459:668-U671.
    • (2009) Nature , vol.459
    • Tokuriki, N.1    Tawfik, D.S.2
  • 332
    • 79960969621 scopus 로고    scopus 로고
    • Combinatorial events of insertion sequences and ICE in Gram-negative bacteria
    • Toleman MA, Walsh TR. 2011. Combinatorial events of insertion sequences and ICE in Gram-negative bacteria. FEMS Microbiol. Rev. 35:912-935.
    • (2011) FEMS Microbiol. Rev. , vol.35 , pp. 912-935
    • Toleman, M.A.1    Walsh, T.R.2
  • 333
    • 33846245425 scopus 로고    scopus 로고
    • 2: A possible counteroffensive strategy for interspecies competition
    • 2: a possible counteroffensive strategy for interspecies competition. Mol. Microbiol. 63:872-880.
    • (2007) Mol. Microbiol. , vol.63 , pp. 872-880
    • Tong, H.1
  • 334
    • 33144488588 scopus 로고    scopus 로고
    • Guanosine 3′,5′-bispyrophosphate coordinates global gene expression during glucose-lactose diauxie in Escherichia coli
    • Traxler MF, Chang DE, Conway T. 2006. Guanosine 3′,5′- bispyrophosphate coordinates global gene expression during glucose-lactose diauxie in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 103:2374-2379.
    • (2006) Proc. Natl. Acad. Sci. U. S. A. , vol.103 , pp. 2374-2379
    • Traxler, M.F.1    Chang, D.E.2    Conway, T.3
  • 335
    • 77957999151 scopus 로고    scopus 로고
    • Gene expression in Pseudomonas aeruginosa swarming motility
    • doi:10.1186/1471-2164-11-587
    • Tremblay J, Deziel E. 2010. Gene expression in Pseudomonas aeruginosa swarming motility. BMC Genomics 11:587. doi:10.1186/1471-2164-11-587.
    • (2010) BMC Genomics , vol.11 , pp. 587
    • Tremblay, J.1    Deziel, E.2
  • 336
    • 0030711638 scopus 로고    scopus 로고
    • Negative regulation of mutS and mutH repair gene expression by the hfq and RpoS global regulators of Escherichia coli K-12
    • Tsui HCT, Feng G, Winkler ME. 1997. Negative regulation of mutS and mutH repair gene expression by the hfq and RpoS global regulators of Escherichia coli K-12. J. Bacteriol. 179:7476-7487.
    • (1997) J. Bacteriol. , vol.179 , pp. 7476-7487
    • Tsui, H.C.T.1    Feng, G.2    Winkler, M.E.3
  • 337
    • 0034618684 scopus 로고    scopus 로고
    • Involvement of inorganic polyphosphate in expression of SOS genes
    • Tsutsumi K, Munekata M, Shiba T. 2000. Involvement of inorganic polyphosphate in expression of SOS genes. Biochim. Biophys. Acta 1493:73-81.
    • (2000) Biochim. Biophys. Acta , vol.1493 , pp. 73-81
    • Tsutsumi, K.1    Munekata, M.2    Shiba, T.3
  • 338
    • 0031686598 scopus 로고    scopus 로고
    • Effect of slow growth on metabolism of Escherichia coli, as revealed by global metabolite pool ("metabolome") analysis
    • Tweeddale H, Notley-McRobb L, Ferenci T. 1998. Effect of slow growth on metabolism of Escherichia coli, as revealed by global metabolite pool ("metabolome") analysis. J. Bacteriol. 180:5109-5116.
    • (1998) J. Bacteriol. , vol.180 , pp. 5109-5116
    • Tweeddale, H.1    Notley-McRobb, L.2    Ferenci, T.3
  • 339
    • 77955114279 scopus 로고    scopus 로고
    • E. coli, what a noisy bug
    • Tyagi S. 2010. E. coli, what a noisy bug. Science 329:518-519.
    • (2010) Science , vol.329 , pp. 518-519
    • Tyagi, S.1
  • 341
    • 0030774247 scopus 로고    scopus 로고
    • Variable number of tandem repeats in clinical strains of Haemophilus influenzae
    • van Belkum A, et al. 1997. Variable number of tandem repeats in clinical strains of Haemophilus influenzae. Infect. Immun. 65:5017-5027.
    • (1997) Infect. Immun. , vol.65 , pp. 5017-5027
    • Van Belkum, A.1
  • 342
    • 79954568386 scopus 로고    scopus 로고
    • Escherichia coli population heterogeneity: Subpopulation dynamics at super-optimal temperatures
    • Van Derlinden E, Boons K, Van Impe JF. 2011. Escherichia coli population heterogeneity: subpopulation dynamics at super-optimal temperatures. Food Microbiol. 28:667-677.
    • (2011) Food Microbiol. , vol.28 , pp. 667-677
    • Van Derlinden, E.1    Boons, K.2    Van Impe, J.F.3
  • 343
    • 79954596315 scopus 로고    scopus 로고
    • Phase variation: How to create and coordinate population diversity
    • van der Woude MW. 2011. Phase variation: how to create and coordinate population diversity. Curr. Opin. Microbiol. 14:205-211.
    • (2011) Curr. Opin. Microbiol. , vol.14 , pp. 205-211
    • Van Der Woude, M.W.1
  • 344
    • 33644849698 scopus 로고    scopus 로고
    • Re-examining the role and random nature of phase variation
    • van der Woude MW. 2006. Re-examining the role and random nature of phase variation. FEMS Microbiol. Lett. 254:190-197.
    • (2006) FEMS Microbiol. Lett. , vol.254 , pp. 190-197
    • Van Der Woude, M.W.1
  • 346
    • 0028940059 scopus 로고
    • comK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis
    • van Sinderen D, et al. 1995. comK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis. Mol. Microbiol. 15:455-462.
    • (1995) Mol. Microbiol. , vol.15 , pp. 455-462
    • Van Sinderen, D.1
  • 347
    • 41949116255 scopus 로고    scopus 로고
    • Bet-hedging and epigenetic inheritance in bacterial cell development
    • Veening J-W, et al. 2008. Bet-hedging and epigenetic inheritance in bacterial cell development. Proc. Natl. Acad. Sci. U. S. A. 105:4393-4398.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 4393-4398
    • Veening, J.-W.1
  • 348
    • 33747129971 scopus 로고    scopus 로고
    • Single cell analysis of gene expression patterns of competence development and initiation of sporulation in Bacillus subtilis grown on chemically defined media
    • Veening JW, Smits WK, Hamoen LW, Kuipers OP. 2006. Single cell analysis of gene expression patterns of competence development and initiation of sporulation in Bacillus subtilis grown on chemically defined media. J. Appl. Microbiol. 101:531-541.
    • (2006) J. Appl. Microbiol. , vol.101 , pp. 531-541
    • Veening, J.W.1    Smits, W.K.2    Hamoen, L.W.3    Kuipers, O.P.4
  • 350
    • 79952393752 scopus 로고    scopus 로고
    • Core and panmetabolism in Escherichia coli
    • Vieira G, et al. 2011. Core and panmetabolism in Escherichia coli. J. Bacteriol. 193:1461-1472.
    • (2011) J. Bacteriol. , vol.193 , pp. 1461-1472
    • Vieira, G.1
  • 351
    • 41649102927 scopus 로고    scopus 로고
    • Control of cell fate by the formation of an architecturally complex bacterial community
    • Vlamakis H, Aguilar C, Losick R, Kolter R. 2008. Control of cell fate by the formation of an architecturally complex bacterial community. Genes Dev. 22:945-953.
    • (2008) Genes Dev. , vol.22 , pp. 945-953
    • Vlamakis, H.1    Aguilar, C.2    Losick, R.3    Kolter, R.4
  • 352
    • 0034972742 scopus 로고    scopus 로고
    • Evolutionary cheating in Escherichia coli stationary phase cultures
    • Vulic M, Kolter R. 2001. Evolutionary cheating in Escherichia coli stationary phase cultures. Genetics 158:519-526.
    • (2001) Genetics , vol.158 , pp. 519-526
    • Vulic, M.1    Kolter, R.2
  • 353
    • 14344263352 scopus 로고    scopus 로고
    • Distributed robustness versus redundancy as causes of mutational robustness
    • Wagner A. 2005. Distributed robustness versus redundancy as causes of mutational robustness. Bioessays 27:176-188.
    • (2005) Bioessays , vol.27 , pp. 176-188
    • Wagner, A.1
  • 354
    • 36348992094 scopus 로고    scopus 로고
    • Robustness and evolvability: A paradox resolved
    • Wagner A. 2008. Robustness and evolvability: a paradox resolved. Proc. R. Soc. Lond. Ser. B. 275:91-100.
    • (2008) Proc. R. Soc. Lond. Ser. B. , vol.275 , pp. 91-100
    • Wagner, A.1
  • 355
    • 77958493094 scopus 로고    scopus 로고
    • Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitation
    • Wang L, et al. 2010. Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitation. Genome Biol. Evol. 2:478-487.
    • (2010) Genome Biol. Evol. , vol.2 , pp. 478-487
    • Wang, L.1
  • 356
    • 77953807608 scopus 로고    scopus 로고
    • Abundant indispensable redundancies in cellular metabolic networks
    • Wang Z, Zhang JZ. 2009. Abundant indispensable redundancies in cellular metabolic networks. Genome Biol. Evol. 1:23-33.
    • (2009) Genome Biol. Evol. , vol.1 , pp. 23-33
    • Wang, Z.1    Zhang, J.Z.2
  • 357
    • 79958766577 scopus 로고    scopus 로고
    • Multi-parameter flow cytometry and cell sorting reveal extensive physiological heterogeneity in Bacillus cereus batch cultures
    • Want A, et al. 2011. Multi-parameter flow cytometry and cell sorting reveal extensive physiological heterogeneity in Bacillus cereus batch cultures. Biotechnol. Lett. 33:1395-1405.
    • (2011) Biotechnol. Lett. , vol.33 , pp. 1395-1405
    • Want, A.1
  • 358
    • 27944442272 scopus 로고    scopus 로고
    • Quorum sensing: Cell-to-cell communication in bacteria
    • Waters CM, Bassler BL. 2005. Quorum sensing: cell-to-cell communication in bacteria. Annu. Rev. Cell Dev. Biol. 21:319-346.
    • (2005) Annu. Rev. Cell Dev. Biol. , vol.21 , pp. 319-346
    • Waters, C.M.1    Bassler, B.L.2
  • 359
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in Escherichia coli: Sigma(S)-dependent genes, promoters, and sigma factor selectivity
    • Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R. 2005. Genome-wide analysis of the general stress response network in Escherichia coli: sigma(S)-dependent genes, promoters, and sigma factor selectivity. J. Bacteriol. 187:1591-1603.
    • (2005) J. Bacteriol. , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 360
    • 2942563742 scopus 로고    scopus 로고
    • Stress responses and replication of plasmids in bacterial cells
    • doi:10.1186/1475-2859-1-2
    • Wegrzyn G, Wegrzyn A. 2002. Stress responses and replication of plasmids in bacterial cells. Microb. Cell Fact. 1:2. doi:10.1186/1475-2859-1-2.
    • (2002) Microb. Cell Fact. , vol.1 , pp. 2
    • Wegrzyn, G.1    Wegrzyn, A.2
  • 361
    • 66949145150 scopus 로고    scopus 로고
    • Stress, sublethal injury, resuscitation, and virulence of bacterial foodborne pathogens
    • Wesche AM, Gurtler JB, Marks BP, Ryser ET. 2009. Stress, sublethal injury, resuscitation, and virulence of bacterial foodborne pathogens. J. Food Prot. 72:1121-1138.
    • (2009) J. Food Prot. , vol.72 , pp. 1121-1138
    • Wesche, A.M.1    Gurtler, J.B.2    Marks, B.P.3    Ryser, E.T.4
  • 363
    • 0031771290 scopus 로고    scopus 로고
    • Oxygen-insensitive nitroreductases: Analysis of the roles of nfsA and nfsB in development of resistance to 5-nitrofuran derivatives in Escherichia coli
    • Whiteway J, et al. 1998. Oxygen-insensitive nitroreductases: analysis of the roles of nfsA and nfsB in development of resistance to 5-nitrofuran derivatives in Escherichia coli. J. Bacteriol. 180:5529-5539.
    • (1998) J. Bacteriol. , vol.180 , pp. 5529-5539
    • Whiteway, J.1
  • 364
    • 0026716841 scopus 로고
    • Small molecule-mediated density-dependent control of gene expression in prokaryotes: Bioluminescence and the biosynthesis of carbapenem antibiotics
    • Williams P, et al. 1992. Small molecule-mediated density-dependent control of gene expression in prokaryotes: bioluminescence and the biosynthesis of carbapenem antibiotics. FEMS Microbiol. Lett. 79:161-167.
    • (1992) FEMS Microbiol. Lett. , vol.79 , pp. 161-167
    • Williams, P.1
  • 365
    • 77957968694 scopus 로고    scopus 로고
    • Regulation of glycogen metabolism in yeast and bacteria
    • Wilson WA, et al. 2010. Regulation of glycogen metabolism in yeast and bacteria. FEMS Microbiol. Rev. 34:952-985.
    • (2010) FEMS Microbiol. Rev. , vol.34 , pp. 952-985
    • Wilson, W.A.1
  • 366
    • 0025078793 scopus 로고
    • Mutants of Escherichia coli K-12 exhibiting reduced killing by both quinolone and beta-lactam antimicrobial agents
    • Wolfson JS, Hooper DC, McHugh GL, Bozza MA, Swartz MN. 1990. Mutants of Escherichia coli K-12 exhibiting reduced killing by both quinolone and beta-lactam antimicrobial agents. Antimicrob. Agents Chemother. 34:1938-1943.
    • (1990) Antimicrob. Agents Chemother. , vol.34 , pp. 1938-1943
    • Wolfson, J.S.1    Hooper, D.C.2    McHugh, G.L.3    Bozza, M.A.4    Swartz, M.N.5
  • 367
    • 33845321413 scopus 로고    scopus 로고
    • The emergence of antibiotic resistance by mutation
    • Woodford N, Ellington MJ. 2007. The emergence of antibiotic resistance by mutation. Clin. Microbiol. Infect. 13:5-18.
    • (2007) Clin. Microbiol. Infect. , vol.13 , pp. 5-18
    • Woodford, N.1    Ellington, M.J.2
  • 368
    • 0026541483 scopus 로고
    • Construction of a umuDC operon substitution mutation in Escherichia coli
    • Woodgate R. 1992. Construction of a umuDC operon substitution mutation in Escherichia coli. Mutat. Res. 281:221-225.
    • (1992) Mutat. Res. , vol.281 , pp. 221-225
    • Woodgate, R.1
  • 369
    • 79952793415 scopus 로고    scopus 로고
    • Second-order selection for evolvability in a large Escherichia coli population
    • Woods RJ, et al. 2011. Second-order selection for evolvability in a large Escherichia coli population. Science 331:1433-1436.
    • (2011) Science , vol.331 , pp. 1433-1436
    • Woods, R.J.1
  • 370
    • 77957967189 scopus 로고    scopus 로고
    • Phenotypic and metabolic profiling of colony morphology variants evolved from Pseudomonas fluorescens biofilms
    • Workentine ML, et al. 2010. Phenotypic and metabolic profiling of colony morphology variants evolved from Pseudomonas fluorescens biofilms. Environ. Microbiol. 12:1565-1577.
    • (2010) Environ. Microbiol. , vol.12 , pp. 1565-1577
    • Workentine, M.L.1
  • 371
    • 50149112177 scopus 로고    scopus 로고
    • Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis
    • Wrande M, Roth JR, Hughes D. 2008. Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis. Proc. Natl. Acad. Sci. U. S. A. 105:11863-11868.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 11863-11868
    • Wrande, M.1    Roth, J.R.2    Hughes, D.3
  • 372
    • 2442479591 scopus 로고    scopus 로고
    • Stress-directed adaptive mutations and evolution
    • Wright BE. 2004. Stress-directed adaptive mutations and evolution. Mol. Microbiol. 52:643-650.
    • (2004) Mol. Microbiol. , vol.52 , pp. 643-650
    • Wright, B.E.1
  • 373
    • 78049419053 scopus 로고    scopus 로고
    • Optimal strategy for competence differentiation in bacteria
    • doi:10.1371/journal.pgen.1001108
    • Wylie CS, Trout AD, Kessler DA, Levine H. 2010. Optimal strategy for competence differentiation in bacteria. PLoS Genet. 6:e1001108. doi:10.1371/journal.pgen.1001108.
    • (2010) PLoS Genet. , vol.6
    • Wylie, C.S.1    Trout, A.D.2    Kessler, D.A.3    Levine, H.4
  • 375
    • 0030602818 scopus 로고    scopus 로고
    • Gasping for life in stationary phase
    • Zambrano MM, Kolter R. 1996. Gasping for life in stationary phase. Cell 86:181-184.
    • (1996) Cell , vol.86 , pp. 181-184
    • Zambrano, M.M.1    Kolter, R.2
  • 376
    • 23944478363 scopus 로고    scopus 로고
    • Genetic variability under mutation selection balance
    • Zhang X-S, Hill WG. 2005. Genetic variability under mutation selection balance. Trends Ecol. Evol. 20:468-470.
    • (2005) Trends Ecol. Evol. , vol.20 , pp. 468-470
    • Zhang, X.-S.1    Hill, W.G.2
  • 377
    • 70350176596 scopus 로고    scopus 로고
    • A mechanism of transposon-mediated directed mutation
    • Zhang ZG, Saier MH. 2009. A mechanism of transposon-mediated directed mutation. Mol. Microbiol. 74:29-43.
    • (2009) Mol. Microbiol. , vol.74 , pp. 29-43
    • Zhang, Z.G.1    Saier, M.H.2
  • 380
    • 0032859398 scopus 로고    scopus 로고
    • Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase
    • Zinser ER, Kolter R. 1999. Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase. J. Bacteriol. 181:5800-5807.
    • (1999) J. Bacteriol. , vol.181 , pp. 5800-5807
    • Zinser, E.R.1    Kolter, R.2
  • 381
    • 0041817649 scopus 로고    scopus 로고
    • Bacterial evolution through the selective loss of beneficial genes: Trade-offs in expression involving two loci
    • Zinser ER, Schneider D, Blott M, Kolter R. 2003. Bacterial evolution through the selective loss of beneficial genes: trade-offs in expression involving two loci. Genetics 164:1271-1277.
    • (2003) Genetics , vol.164 , pp. 1271-1277
    • Zinser, E.R.1    Schneider, D.2    Blott, M.3    Kolter, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.