-
1
-
-
46849106965
-
Functional organisation of Escherichia coli transcriptional regulatory network
-
18599074
-
Functional organisation of Escherichia coli transcriptional regulatory network. A Martínez-Antonio SC Janga D Thieffry, J Mol Biol 2008 381 238 247 18599074
-
(2008)
J Mol Biol
, vol.381
, pp. 238-247
-
-
Martínez-Antonio, A.1
Janga, S.C.2
Thieffry, D.3
-
2
-
-
33748846417
-
Transcriptional regulatory networks in bacteria: from input signals to output responses
-
DOI 10.1016/j.mib.2006.08.007, PII S1369527406001299, Antimicrobials/Genomics
-
Transcriptional regulatory networks in bacteria: from input signals to output responses. ASN Seshasayee P Bertone GM Fraser NM Luscombe, Curr Opin Microbiol 2006 9 511 519 10.1016/j.mib.2006.08.007 16942903 (Pubitemid 44419503)
-
(2006)
Current Opinion in Microbiology
, vol.9
, Issue.5
, pp. 511-519
-
-
Seshasayee, A.S.1
Bertone, P.2
Fraser, G.M.3
Luscombe, N.M.4
-
3
-
-
52649087274
-
Modelling and analysis of gene regulatory networks
-
10.1038/nrm2503. 18797474
-
Modelling and analysis of gene regulatory networks. G Karlebach R Shamir, Nat Rev Mol Cell Biol 2008 9 770 780 10.1038/nrm2503 18797474
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 770-780
-
-
Karlebach, G.1
Shamir, R.2
-
4
-
-
34548219522
-
Comparative genomic reconstruction of transcriptional regulatory networks in bacteria
-
DOI 10.1021/cr068309+
-
Comparative genomic reconstruction of transcriptional regulatory networks in bacteria. DA Rodionov, Chem Rev 2007 107 3467 3497 10.1021/cr068309+ 17636889 (Pubitemid 47322742)
-
(2007)
Chemical Reviews
, vol.107
, Issue.8
, pp. 3467-3497
-
-
Rodionov, D.A.1
-
5
-
-
34548530491
-
Microbial regulatory and metabolic networks
-
DOI 10.1016/j.copbio.2007.07.002, PII S0958166907000845, Protein technologies / Systems Biology
-
Microbial regulatory and metabolic networks. B Cho P Charusanti MJ Herrgård BO Palsson, Curr Opin Biotechnol 2007 18 360 364 10.1016/j.copbio.2007.07.002 17719767 (Pubitemid 47385182)
-
(2007)
Current Opinion in Biotechnology
, vol.18
, Issue.4
, pp. 360-364
-
-
Cho, B.-K.1
Charusanti, P.2
Herrgard, M.J.3
Palsson, B..4
-
6
-
-
10344224043
-
Phenotypic differences between Salmonella and Escherichia coli resulting from the disparate regulation of homologous genes
-
DOI 10.1073/pnas.0406038101
-
Phenotypic differences between Salmonella and Escherichia coli resulting from the disparate regulation of homologous genes. MD Winfield EA Groisman, Proc Natl Acad Sci USA 2004 101 17162 17167 10.1073/pnas.0406038101 15569938 (Pubitemid 39627791)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.49
, pp. 17162-17167
-
-
Winfield, M.D.1
Groisman, E.A.2
-
7
-
-
14844328907
-
Expression of fnr is constrained by an upstream IS5 insertion in certain Escherichia coli K-12 strains
-
DOI 10.1128/JB.187.8.2609-2617.2005
-
Expression of fnr is constrained by an upstream IS5 insertion in certain Escherichia coli K-12 strains. RG Sawers, J Bacteriol 2005 187 2609 2617 10.1128/JB.187.8.2609-2617.2005 15805507 (Pubitemid 40490366)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.8
, pp. 2609-2617
-
-
Sawers, R.G.1
-
8
-
-
43449092893
-
Limited functional conservation of a global regulator among related bacterial genera: Lrp in Escherichia, Proteus and Vibrio
-
10.1186/1471-2180-8-60. 18405378
-
Limited functional conservation of a global regulator among related bacterial genera: Lrp in Escherichia, Proteus and Vibrio. RE Lintner PK Mishra P Srivastava BM Martinez-Vaz AB Khodursky RM Blumenthal, BMC Microbiol 2008 8 60 10.1186/1471-2180-8-60 18405378
-
(2008)
BMC Microbiol
, vol.8
, pp. 60
-
-
Lintner, R.E.1
Mishra, P.K.2
Srivastava, P.3
Martinez-Vaz, B.M.4
Khodursky, A.B.5
Blumenthal, R.M.6
-
10
-
-
0037093379
-
Regulation of σ factor competition by the alarmone ppGpp
-
DOI 10.1101/gad.227902
-
Regulation of sigma factor competition by the alarmone ppGpp. M Jishage K Kvint V Shingler T Nyström, Genes Dev 2002 16 1260 1270 10.1101/gad.227902 12023304 (Pubitemid 34553106)
-
(2002)
Genes and Development
, vol.16
, Issue.10
, pp. 1260-1270
-
-
Jishage, M.1
Kvint, K.2
Shingler, V.3
Nystrom, T.4
-
11
-
-
21244473267
-
Maintaining a healthy SPANC balance through regulatory and mutational adaptation
-
DOI 10.1111/j.1365-2958.2005.04649.x
-
Maintaining a healthy SPANC balance through regulatory and mutational adaptation. T Ferenci, Mol Microbiol 2005 57 1 8 10.1111/j.1365-2958.2005.04649. x 15948944 (Pubitemid 40896592)
-
(2005)
Molecular Microbiology
, vol.57
, Issue.1
, pp. 1-8
-
-
Ferenci, T.1
-
12
-
-
33846947959
-
The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase
-
10.1111/j.1365-2958.2007.05601.x. 17302812
-
The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. A Typas G Becker R Hengge, Mol Microbiol 2007 63 1296 1306 10.1111/j.1365-2958.2007.05601.x 17302812
-
(2007)
Mol Microbiol
, vol.63
, pp. 1296-1306
-
-
Typas, A.1
Becker, G.2
Hengge, R.3
-
14
-
-
14244256556
-
S-dependent genes, promoters, and sigma factor selectivity
-
DOI 10.1128/JB.187.5.1591-1603.2005
-
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. H Weber T Polen J Heuveling VF Wendisch R Hengge, J Bacteriol 2005 187 1591 1603 10.1128/JB.187.5.1591-1603.2005 15716429 (Pubitemid 40289359)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.5
, pp. 1591-1603
-
-
Weber, H.1
Polen, T.2
Heuveling, J.3
Wendisch, V.F.4
Hengge, R.5
-
15
-
-
45449090551
-
(P)ppGpp: Still magical?
-
10.1146/annurev.micro.62.081307.162903. 18454629
-
(p)ppGpp: still magical? K Potrykus M Cashel, Annu Rev Microbiol 2008 62 35 51 10.1146/annurev.micro.62.081307.162903 18454629
-
(2008)
Annu Rev Microbiol
, vol.62
, pp. 35-51
-
-
Potrykus, K.1
Cashel, M.2
-
16
-
-
0014478832
-
Two compounds implicated in the function of the RC gene of Escherichia coli
-
10.1038/221838a0. 4885263
-
Two compounds implicated in the function of the RC gene of Escherichia coli. M Cashel J Gallant, Nature 1969 221 838 841 10.1038/221838a0 4885263
-
(1969)
Nature
, vol.221
, pp. 838-841
-
-
Cashel, M.1
Gallant, J.2
-
17
-
-
0015239820
-
On the regulation of guanosine tetraphosphate levels in stringent and relaxed strains of Escherichia coli
-
4937124
-
On the regulation of guanosine tetraphosphate levels in stringent and relaxed strains of Escherichia coli. RA Lazzarini M Cashel J Gallant, J Biol Chem 1971 246 4381 4385 4937124
-
(1971)
J Biol Chem
, vol.246
, pp. 4381-4385
-
-
Lazzarini, R.A.1
Cashel, M.2
Gallant, J.3
-
18
-
-
0029079412
-
Guanosine 3',5'-bispyrophosphate (ppGpp) synthesis in cells of Escherichia coli starved for Pi
-
7608079
-
Guanosine 3',5'-bispyrophosphate (ppGpp) synthesis in cells of Escherichia coli starved for Pi. B Spira N Silberstein E Yagil, J Bacteriol 1995 177 4053 8 7608079
-
(1995)
J Bacteriol
, vol.177
, pp. 4053-8
-
-
Spira, B.1
Silberstein, N.2
Yagil, E.3
-
20
-
-
0003174053
-
The stringent response
-
American Society for Microbiology Washington, D.C Neidhart FC (Ed. in Chief)
-
The stringent response. M Cashel DM Gentry VJ Hernandez D Vinella, Escherichia coli and Salmonella: cellular and molecular biology American Society for Microbiology Washington, D.C, Neidhart FC (Ed. in Chief), 1996 1 1458 1496
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, vol.1
, pp. 1458-1496
-
-
Cashel, M.1
Gentry, D.M.2
Hernandez, V.J.3
Vinella, D.4
-
21
-
-
53449097801
-
Strain variation in ppGpp concentration and RpoS levels in laboratory strains of Escherichia coli K-12
-
10.1099/mic.0.2008/018457-0. 18757823
-
Strain variation in ppGpp concentration and RpoS levels in laboratory strains of Escherichia coli K-12. B Spira X Hu T Ferenci, Microbiology 2008 154 2887 95 10.1099/mic.0.2008/018457-0 18757823
-
(2008)
Microbiology
, vol.154
, pp. 2887-95
-
-
Spira, B.1
Hu, X.2
Ferenci, T.3
-
22
-
-
0034686043
-
RpoS-dependent promoters require guanosine tetraphosphate for induction even in the presence of high levels of σ(s)
-
DOI 10.1074/jbc.C000128200
-
RpoS-dependent promoters require guanosine tetraphosphate for induction even in the presence of high levels of sigma(S). K Kvint A Farewell T Nyström, J Biol Chem 2000 275 14795 14798 10.1074/jbc.C000128200 10747855 (Pubitemid 30337190)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.20
, pp. 14795-14798
-
-
Kvint, K.1
Farewell, A.2
Nystrom, T.3
-
23
-
-
8544232750
-
Growth versus maintenance: A trade-off dictated by RNA polymerase availability and sigma factor competition?
-
DOI 10.1111/j.1365-2958.2004.04342.x
-
Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition? T Nyström, Mol Microbiol 2004 54 855 862 15522072 (Pubitemid 39491023)
-
(2004)
Molecular Microbiology
, vol.54
, Issue.4
, pp. 855-862
-
-
Nystrom, T.1
-
24
-
-
0036331056
-
DksA affects ppGpp induction of RpoS at a translational level
-
DOI 10.1128/JB.184.16.4455-4465.2002
-
DksA affects ppGpp induction of RpoS at a translational level. L Brown D Gentry T Elliott M Cashel, J Bacteriol 2002 184 4455 65 10.1128/JB.184.16.4455- 4465.2002 12142416 (Pubitemid 34832574)
-
(2002)
Journal of Bacteriology
, vol.184
, Issue.16
, pp. 4455-4465
-
-
Brown, L.1
Gentry, D.2
Elliott, T.3
Cashel, M.4
-
25
-
-
0036724358
-
Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli
-
DOI 10.1128/JB.184.18.5077-5087.2002
-
Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli. M Hirsch T Elliott, J Bacteriol 2002 184 5077 5087 10.1128/JB.184.18.5077-5087. 2002 12193624 (Pubitemid 34971033)
-
(2002)
Journal of Bacteriology
, vol.184
, Issue.18
, pp. 5077-5087
-
-
Hirsch, M.1
Elliott, T.2
-
26
-
-
0141817853
-
What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?
-
DOI 10.1016/j.tim.2003.08.003
-
What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli? T Ferenci, Trends Microbiol 2003 11 457 61 10.1016/j.tim.2003.08.003 14557028 (Pubitemid 37214872)
-
(2003)
Trends in Microbiology
, vol.11
, Issue.10
, pp. 457-461
-
-
Ferenci, T.1
-
27
-
-
34447500551
-
Comparative genomic hybridization and physiological characterization of environment isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli
-
DOI 10.1099/mic.0.2006/002006-0
-
Comparative genomic hybridization and physiological characterization of environmental isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli. J Ihssen E Grasselli C Bassin P François J Piffaretti W Köster J Schrenzel T Egli, Microbiology (Reading, Engl.) 2007 153 2052 2066 10.1099/mic.0.2006/002006-0 17600050 (Pubitemid 47074060)
-
(2007)
Microbiology
, vol.153
, Issue.7
, pp. 2052-2066
-
-
Ihssen, J.1
Grasselli, E.2
Bassin, C.3
Fracois, P.4
Piffaretti, J.-C.5
Koster, W.6
Schrenzel, J.7
Egli, T.8
-
28
-
-
4344633752
-
A regulatory trade-off as a source of strain variation in the species Escherichia coli
-
DOI 10.1128/JB.186.17.5614-5620.2004
-
A regulatory trade-off as a source of strain variation in the species Escherichia coli. T King A Ishihama A Kori T Ferenci, J Bacteriol 2004 186 5614 20 10.1128/JB.186.17.5614-5620.2004 15317765 (Pubitemid 39128633)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.17
, pp. 5614-5620
-
-
King, T.1
Ishihama, A.2
Kori, A.3
Ferenci, T.4
-
29
-
-
18444375008
-
Variation in acid resistance among shiga toxin-producing clones of pathogenic Escherichia coli
-
DOI 10.1128/AEM.71.5.2493-2500.2005
-
Variation in acid resistance among shiga toxin-producing clones of pathogenic Escherichia coli. TM Large ST Walk TS Whittam, Appl Environ Microbiol 2005 71 2493 2500 10.1128/AEM.71.5.2493-2500.2005 15870339 (Pubitemid 40646994)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.5
, pp. 2493-2500
-
-
Large, T.M.1
Walk, S.T.2
Whittam, T.S.3
-
30
-
-
33746064095
-
Functional heterogeneity of RpoS in stress tolerance of enterohemorrhagic Escherichia coli strains
-
DOI 10.1128/AEM.02842-05
-
Functional heterogeneity of RpoS in stress tolerance of enterohemorrhagic Escherichia coli strains. AA Bhagwat J Tan M Sharma M Kothary S Low BD Tall M Bhagwat, Appl Environ Microbiol 2006 72 4978 4986 10.1128/AEM.02842-05 16820496 (Pubitemid 44078829)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.7
, pp. 4978-4986
-
-
Bhagwat, A.A.1
Tan, J.2
Sharma, M.3
Kothary, M.4
Low, S.5
Tall, B.D.6
Bhagwat, M.7
-
31
-
-
0021367325
-
Standard reference strains of Escherichia coli from natural populations
-
Standard reference strains of Escherichia coli from natural populations. H Ochman RK Selander, J Bacteriol 1984 157 690 3 6363394 (Pubitemid 14190968)
-
(1984)
Journal of Bacteriology
, vol.157
, Issue.2
, pp. 690-693
-
-
Ochman, H.1
Selander, R.K.2
-
32
-
-
0036181664
-
RpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses
-
rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses. L Notley-McRobb T King T Ferenci, J Bacteriol 2002 184 806 811 10.1128/JB.184.3.806-811.2002 11790751 (Pubitemid 34150228)
-
(2002)
Journal of Bacteriology
, vol.184
, Issue.3
, pp. 806-811
-
-
Notley-McRobb, L.1
King, T.2
Ferenci, T.3
-
33
-
-
0024841943
-
Nucleotide sequence of katF of Escherichia coli suggests KatF protein is a novel σ transcription factor
-
Nucleotide sequence of katF of Escherichia coli suggests KatF protein is a novel sigma transcription factor. MR Mulvey PC Loewen, Nucleic Acids Res 1989 17 9979 9991 10.1093/nar/17.23.9979 2690013 (Pubitemid 20010796)
-
(1989)
Nucleic Acids Research
, vol.17
, Issue.23
, pp. 9979-9991
-
-
Mulvey, M.R.1
Loewen, P.C.2
-
34
-
-
0037235274
-
Genomic variability among enteric pathogens: The case of the mutS-rpoS intergenic region
-
DOI 10.1016/S0966-842X(02)00005-7, PII S0966842X02000057
-
Genomic variability among enteric pathogens: the case of the mutS-rpoS intergenic region. ML Kotewicz EW Brown J Eugene LeClerc TA Cebula, Trends Microbiol 2003 11 2 6 10.1016/S0966-842X(02)00005-7 12526846 (Pubitemid 36084347)
-
(2003)
Trends in Microbiology
, vol.11
, Issue.1
, pp. 2-6
-
-
Kotewicz, M.L.1
Brown, E.W.2
LeClerc, J.E.3
Cebula, T.A.4
-
35
-
-
0032764023
-
Promiscuous origin of a chimeric sequence in the Escherichia coli O157:H7 genome
-
10601221
-
Promiscuous origin of a chimeric sequence in the Escherichia coli O157:H7 genome. JE LeClerc B Li WL Payne TA Cebula, J Bacteriol 1999 181 7614 7617 10601221
-
(1999)
J Bacteriol
, vol.181
, pp. 7614-7617
-
-
Leclerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
36
-
-
0033765065
-
An Escherichia coli reference collection group B2- and uropathogen-associated polymorphism in the rpoS-mutS region of the E. coli chromosome
-
10.1128/JB.182.21.6272-6276.2000. 11029456
-
An Escherichia coli reference collection group B2- and uropathogen-associated polymorphism in the rpoS-mutS region of the E. coli chromosome. DE Culham JM Wood, J Bacteriol 2000 182 6272 6276 10.1128/JB.182.21.6272-6276.2000 11029456
-
(2000)
J Bacteriol
, vol.182
, pp. 6272-6276
-
-
Culham, D.E.1
Wood, J.M.2
-
37
-
-
23344437538
-
Characterization of enterohemorrhagic Escherichia coli strains based on acid resistance phenotypes
-
DOI 10.1128/IAI.73.8.4993-5003.2005
-
Characterization of enterohemorrhagic Escherichia coli strains based on acid resistance phenotypes. AA Bhagwat L Chan R Han J Tan M Kothary J Jean-Gilles BD Tall, Infect Immun 2005 73 4993 5003 10.1128/IAI.73.8.4993-5003. 2005 16041014 (Pubitemid 41105657)
-
(2005)
Infection and Immunity
, vol.73
, Issue.8
, pp. 4993-5003
-
-
Bhagwat, A.A.1
Chan, L.2
Han, R.3
Tan, J.4
Kothary, M.5
Jean-Gilles, J.6
Tall, B.D.7
-
38
-
-
0029972010
-
Characterization of the acid resistance phenotype and rpoS alleles of Shiga-like toxin-producing Escherichia coli
-
Characterization of the acid resistance phenotype and rpoS alleles of shiga-like toxin-producing Escherichia coli. SR Waterman PL Small, Infect Immun 1996 64 2808 2811 8698513 (Pubitemid 26226851)
-
(1996)
Infection and Immunity
, vol.64
, Issue.7
, pp. 2808-2811
-
-
Waterman, S.R.1
Small, P.L.C.2
-
39
-
-
0035671034
-
Characterisation of the allelic variation in the rpoS gene in thirteen K12 and six other non-pathogenic Escherichia coli strains
-
DOI 10.1007/s00438-001-0610-0
-
Characterisation of the allelic variation in the rpoS gene in thirteen K12 and six other non-pathogenic Escherichia coli strains. T Atlung HV Nielsen FG Hansen, Mol Genet Genomics 2002 266 873 81 10.1007/s00438-001-0610-0 11810263 (Pubitemid 34045312)
-
(2001)
Molecular Genetics and Genomics
, vol.266
, Issue.5
, pp. 873-881
-
-
Atlung, T.1
Nielsen, H.V.2
Hansen, F.G.3
-
40
-
-
0036714331
-
s (RpoS) subunit of RNA polymerase
-
DOI 10.1128/MMBR.66.3.373-395.2002
-
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. R Hengge-Aronis, Microbiol Mol Biol Rev 2002 66 373 95 10.1128/MMBR.66.3.373-395.2002 12208995 (Pubitemid 35001135)
-
(2002)
Microbiology and Molecular Biology Reviews
, vol.66
, Issue.3
, pp. 373-395
-
-
Hengge-Aronis, R.1
-
41
-
-
67549090009
-
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12
-
10.1128/JB.00118-09. 19376874
-
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12. T Ferenci Z Zhou T Betteridge Y Ren Y Liu L Feng PR Reeves L Wang, J Bacteriol 2009 191 4025 4029 10.1128/JB.00118-09 19376874
-
(2009)
J Bacteriol
, vol.191
, pp. 4025-4029
-
-
Ferenci, T.1
Zhou, Z.2
Betteridge, T.3
Ren, Y.4
Liu, Y.5
Feng, L.6
Reeves, P.R.7
Wang, L.8
-
42
-
-
0024801633
-
Characterization of the relA1 mutation and a comparison of relA1 with new relA null alleles in Escherichia coli
-
Characterization of the relA1 mutation and a comparison of relA1 with new relA null alleles in Escherichia coli. S Metzger G Schreiber E Aizenman M Cashel G Glaser, J Biol Chem 1989 264 21146 21152 2556396 (Pubitemid 20017931)
-
(1989)
Journal of Biological Chemistry
, vol.264
, Issue.35
, pp. 21146-21152
-
-
Metzger, S.1
Schreiber, G.2
Aizenman, E.3
Cashel, M.4
Glaser, G.5
-
43
-
-
0029943235
-
Control of spoT-dependent ppGpp synthesis and degradation in Escherichia coli
-
DOI 10.1006/jmbi.1996.0300
-
Control of spoT-dependent ppGpp synthesis and degradation in Escherichia coli. KD Murray H Bremer, J Mol Biol 1996 259 41 57 10.1006/jmbi.1996.0300 8648647 (Pubitemid 26162620)
-
(1996)
Journal of Molecular Biology
, vol.259
, Issue.1
, pp. 41-57
-
-
Murray, K.D.1
Bremer, H.2
-
44
-
-
0016783954
-
Simple downshift and resulting lack of correlation between ppGpp pool size and ribonucleic acid accumulation
-
1092659
-
Simple downshift and resulting lack of correlation between ppGpp pool size and ribonucleic acid accumulation. MT Hansen ML Pato S Molin NP Fill K von Meyenburg, J Bacteriol 1975 122 585 91 1092659
-
(1975)
J Bacteriol
, vol.122
, pp. 585-91
-
-
Hansen, M.T.1
Pato, M.L.2
Molin, S.3
Fill, N.P.4
Von Meyenburg, K.5
-
45
-
-
34548667968
-
Sensing nutrient levels in bacteria
-
DOI 10.1038/nchembio1007-607, PII NCHEMBIO1007607
-
Sensing nutrient levels in bacteria. T Ferenci, Nat Chem Biol 2007 3 607 608 10.1038/nchembio1007-607 17876315 (Pubitemid 47417718)
-
(2007)
Nature Chemical Biology
, vol.3
, Issue.10
, pp. 607-608
-
-
Ferenci, T.1
-
46
-
-
0242692671
-
Multiple Sigma Subunits and the Partitioning of Bacterial Transcription Space
-
DOI 10.1146/annurev.micro.57.030502.090913
-
Multiple sigma subunits and the partitioning of bacterial transcription space. TM Gruber CA Gross, Annu Rev Microbiol 2003 57 441 466 10.1146/annurev.micro.57.030502.090913 14527287 (Pubitemid 37392951)
-
(2003)
Annual Review of Microbiology
, vol.57
, pp. 441-466
-
-
Gruber, T.M.1
Gross, C.A.2
-
47
-
-
18044367581
-
PpGpp: A global regulator in Escherichia coli
-
DOI 10.1016/j.tim.2005.03.008
-
ppGpp: a global regulator in Escherichia coli. LU Magnusson A Farewell T Nystrom, Trends Microbiol 2005 13 236 242 10.1016/j.tim.2005.03.008 15866041 (Pubitemid 40603907)
-
(2005)
Trends in Microbiology
, vol.13
, Issue.5
, pp. 236-242
-
-
Magnusson, L.U.1
Farewell, A.2
Nystrom, T.3
-
48
-
-
30344476728
-
New horizons for (p)ppGpp in bacterial and plant physiology
-
DOI 10.1016/j.tim.2005.11.006, PII S0966842X05003112
-
New horizons for (p)ppGpp in bacterial and plant physiology. K Braeken M Moris R Daniels J Vanderleyden J Michiels, Trends Microbiol 2006 14 45 54 10.1016/j.tim.2005.11.006 16343907 (Pubitemid 43063191)
-
(2006)
Trends in Microbiology
, vol.14
, Issue.1
, pp. 45-54
-
-
Braeken, K.1
Moris, M.2
Daniels, R.3
Vanderleyden, J.4
Michiels, J.5
-
49
-
-
33745221184
-
PpGpp with DksA controls gene expression in the locus of enterocyte effacement (LEE) pathogenicity island of enterohaemorrhagic Escherichia coli through activation of two virulence regulatory genes
-
10.1111/j.1365-2958.2006.05217.x. 16824105
-
ppGpp with DksA controls gene expression in the locus of enterocyte effacement (LEE) pathogenicity island of enterohaemorrhagic Escherichia coli through activation of two virulence regulatory genes. N Nakanishi H Abe Y Ogura T Hayashi K Tashiro S Kuhara N Sugimoto T Tobe, Mol Microbiol 2006 61 194 205 10.1111/j.1365-2958.2006.05217.x 16824105
-
(2006)
Mol Microbiol
, vol.61
, pp. 194-205
-
-
Nakanishi, N.1
Abe, H.2
Ogura, Y.3
Hayashi, T.4
Tashiro, K.5
Kuhara, S.6
Sugimoto, N.7
Tobe, T.8
-
50
-
-
78149294782
-
Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections
-
10.1371/journal.ppat.1001125. 20941353
-
Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections. M Levert O Zamfir O Clermont O Bouvet S Lespinats MC Hipeaux C Branger B Picard C Saint-Ruf F Norel T Balliau M Zivy H Le Nagard S Cruvellier B Chane-Woon-Ming S Nilsson I Gudelj K Phan T Ferenci O Tenaillon E Denamur, PLoS Pathog 2010 6 10.1371/journal.ppat.1001125 20941353
-
(2010)
PLoS Pathog
, vol.6
-
-
Levert, M.1
Zamfir, O.2
Clermont, O.3
Bouvet, O.4
Lespinats, S.5
Hipeaux, M.C.6
Branger, C.7
Picard, B.8
Saint-Ruf, C.9
Norel, F.10
Balliau, T.11
Zivy, M.12
Le Nagard, H.13
Cruvellier, S.14
Chane-Woon-Ming, B.15
Nilsson, S.16
Gudelj, I.17
Phan, K.18
Ferenci, T.19
Tenaillon, O.20
Denamur, E.21
more..
-
51
-
-
0016379637
-
SpoT, a new genetic locus involved in stringent response in E. coli
-
10.1016/0092-8674(74)90151-2
-
spoT, a new genetic locus involved in stringent response in E. coli. T Laffler J Gallant, Cell 1974 1 27 30 10.1016/0092-8674(74)90151-2
-
(1974)
Cell
, vol.1
, pp. 27-30
-
-
Laffler, T.1
Gallant, J.2
-
53
-
-
34548513288
-
G-protein control of the ribosome-associated stress response protein SpoT
-
DOI 10.1128/JB.00315-07
-
G-protein control of the ribosome-associated stress response protein SpoT. M Jiang SM Sullivan PK Wout JR Maddock, J Bacteriol 2007 189 6140 6147 10.1128/JB.00315-07 17616600 (Pubitemid 47378620)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.17
, pp. 6140-6147
-
-
Jiang, M.1
Sullivan, S.M.2
Wout, P.K.3
Maddock, J.R.4
-
55
-
-
79551663315
-
Discretely calibrated regulatory loops controlled by ppGpp partition gene induction across the 'feast to famine' gradient in Escherichia coli
-
10.1111/j.1365-2958.2010.07498.x. 21299642
-
Discretely calibrated regulatory loops controlled by ppGpp partition gene induction across the 'feast to famine' gradient in Escherichia coli. MF Traxler VM Zacharia S Marquardt SM Summers H Nguyen SE Stark T Conway, Mol Microbiol 2011 79 830 845 10.1111/j.1365-2958.2010.07498.x 21299642
-
(2011)
Mol Microbiol
, vol.79
, pp. 830-845
-
-
Traxler, M.F.1
Zacharia, V.M.2
Marquardt, S.3
Summers, S.M.4
Nguyen, H.5
Stark, S.E.6
Conway, T.7
-
56
-
-
33745819926
-
Genetic requirements for growth of Escherichia coli K12 on methyl-α-D-glucopyranoside and the five α-D-glucosyl-D-fructose isomers of sucrose
-
DOI 10.1074/jbc.M601183200
-
Genetic requirements for growth of Escherichia coli K12 on methyl-alpha-D-glucopyranoside and the five alpha-D-glucosyl-D-fructose isomers of sucrose. A Pikis S Hess I Arnold B Erni J Thompson, J Biol Chem 2006 281 17900 17908 10.1074/jbc.M601183200 16636060 (Pubitemid 44035589)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.26
, pp. 17900-17908
-
-
Pikis, A.1
Hess, S.2
Arnold, I.3
Erni, B.4
Thompson, J.5
-
58
-
-
0027410057
-
Guanosine tetraphosphate inhibits protein synthesis in vivo. A possible protective mechanism for starvation stress in Escherichia coli
-
Guanosine tetraphosphate inhibits protein synthesis in vivo. A possible protective mechanism for starvation stress in Escherichia coli. AL Svitil M Cashel JW Zyskind, J Biol Chem 1993 268 2307 11 8428905 (Pubitemid 23057843)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.4
, pp. 2307-2311
-
-
Svitil, A.L.1
Cashel, M.2
Zyskind, J.W.3
-
59
-
-
0026681771
-
Identification and molecular analysis of glgS, a novel growth-phase-regulated and rpoS-dependent gene involved in glycogen synthesis in Escherichia coli
-
10.1111/j.1365-2958.1992.tb01360.x. 1324388
-
Identification and molecular analysis of glgS, a novel growth-phase-regulated and rpoS-dependent gene involved in glycogen synthesis in Escherichia coli. R Hengge-Aronis D Fischer, Mol Microbiol 1992 6 1877 1886 10.1111/j.1365-2958.1992.tb01360.x 1324388
-
(1992)
Mol Microbiol
, vol.6
, pp. 1877-1886
-
-
Hengge-Aronis, R.1
Fischer, D.2
-
60
-
-
36348992043
-
s levels and rpoS polymorphisms in different E. coli strains
-
DOI 10.1007/s00203-007-0291-0
-
Alkaline phosphatase as a reporter of sigma(S) levels and rpoS polymorphisms in different E. coli strains. B Spira T Ferenci, Arch Microbiol 2008 189 43 47 10.1007/s00203-007-0291-0 17665171 (Pubitemid 350159674)
-
(2008)
Archives of Microbiology
, vol.189
, Issue.1
, pp. 43-47
-
-
Spira, B.1
Ferenci, T.2
-
61
-
-
36749071435
-
Escherichia coli physiology in Luria-Bertani broth
-
DOI 10.1128/JB.01368-07
-
Escherichia coli physiology in Luria-Bertani broth. G Sezonov D Joseleau-Petit R D'Ari, J Bacteriol 2007 189 8746 8749 10.1128/JB.01368-07 17905994 (Pubitemid 350210047)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.23
, pp. 8746-8749
-
-
Sezonov, G.1
Joseleau-Petit, D.2
D'Ari, R.3
-
62
-
-
34748886657
-
Past: Paleontological statistics software package for education and data analysis
-
Past: paleontological statistics software package for education and data analysis. H Oyvind DAT Harper PD Ryan, Palaeontologia Electronica 2001 4 9
-
(2001)
Palaeontologia Electronica
, vol.4
, pp. 9
-
-
Oyvind, H.1
Harper, D.A.T.2
Ryan, P.D.3
-
63
-
-
4344565751
-
A stop codon-dependent internal secondary translation initiation region in Escherichia coli rpoS
-
DOI 10.1261/rna.7500604
-
A stop codon-dependent internal secondary translation initiation region in Escherichia coli rpoS. PR Subbarayan M Sarkar, RNA 2004 10 1359 1365 10.1261/rna.7500604 15317973 (Pubitemid 39122106)
-
(2004)
RNA
, vol.10
, Issue.9
, pp. 1359-1365
-
-
Subbarayan, P.R.1
Sarkar, M.2
|