-
1
-
-
0000568637
-
Bioavailability of energy and its relationship to growth and starvation in nature
-
Morita, R. Y. Bioavailability of energy and its relationship to growth and starvation in nature. Can. J. Microbiol. 34, 436-441 (1988).
-
(1988)
Can. J. Microbiol.
, vol.34
, pp. 436-441
-
-
Morita, R.Y.1
-
2
-
-
0004172291
-
-
(ed. Kjelleberg, S.) (Plenum Press, New York)
-
Morita, R. Y. in Starvation in Bacteria (ed. Kjelleberg, S.) 1-23 (Plenum Press, New York, 1988).
-
(1988)
Starvationin Bacteria
, pp. 1-23
-
-
Morita, R.Y.1
-
3
-
-
84942412109
-
The contemporary carbon cycle
-
(ed. Schlesinger, W. H.) (Elsevier, Amsterdam)
-
Houghton, R. A. The contemporary carbon cycle. In Treatise on Geochemistry Vol. 8 (ed. Schlesinger, W. H.) 473-513 (Elsevier, Amsterdam, 2004).
-
(2004)
Treatise on Geochemistry
, vol.8
, pp. 473-513
-
-
Houghton, R.A.1
-
4
-
-
31544443719
-
Bacteria growth and reproduction
-
(eds Gay, F. P, Bachman, G. W., Benham, R. H. & Buchbinder, L.) (Charles C. Thomas, Springfield)
-
Gay, F. P. Bacteria growth and reproduction. In Agents of Disease and Host Resistance, Including Principles of Immunology, Bacteriology, Mycology, Protozoology, Parasitology, and Virus Disease (eds Gay, F. P, Bachman, G. W., Benham, R. H. & Buchbinder, L.) 1-38 (Charles C. Thomas, Springfield, 1935).
-
(1935)
Agents of Disease and Host Resistance, Including Principles of Immunology, Bacteriology, Mycology, Protozoology, Parasitology, and Virus Disease
, pp. 1-38
-
-
Gay, F.P.1
-
5
-
-
0033616769
-
Evolution of microbial diversity during prolonged starvation
-
Finkel, S. E. & Kolter, R. Evolution of microbial diversity during prolonged starvation. Proc. Natl Acad. Sci. USA 96, 4023-4027 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 4023-4027
-
-
Finkel, S.E.1
Kolter, R.2
-
6
-
-
0004268763
-
-
(eds Storz, G. & Hengge-Aronis, R.) (ASM Press, Washington DC)
-
Finkel, S. E., Zinser, E. & Kolter, R. in Bacterial Stress Responses (eds Storz, G. & Hengge-Aronis, R.) 231-238 (ASM Press, Washington DC, 2000).
-
(2000)
Bacterial Stress Responses
, pp. 231-238
-
-
Finkel, S.E.1
Zinser, E.2
Kolter, R.3
-
7
-
-
0030602818
-
GASPing for life in stationary phase
-
Zambrano, M. M. & Kolter, R. GASPing for life in stationary phase. Cell 86, 181-184 (1996).
-
(1996)
Cell
, vol.86
, pp. 181-184
-
-
Zambrano, M.M.1
Kolter, R.2
-
8
-
-
0027510647
-
Microbial competition: E. coli mutants that take over stationary phase cultures
-
Zambrano, M. M., Siegele, D. A., Almirón, M., Tormo, A. & Kolter, R. Microbial competition: E. coli mutants that take over stationary phase cultures. Science 259, 1757-1760 (1993).
-
(1993)
Science
, vol.259
, pp. 1757-1760
-
-
Zambrano, M.M.1
Siegele, D.A.2
Almirón, M.3
Tormo, A.4
Kolter, R.5
-
9
-
-
0037385854
-
Conditional senescence in bacteria: Death of the immortals
-
Nystrom, T. Conditional senescence in bacteria: Death of the immortals. Mol. Microbiol. 48, 17-23 (2003).
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 17-23
-
-
Nystrom, T.1
-
10
-
-
0035685198
-
DNA as a nutrient: Novel role for bacterial competence gene homologs
-
Finkel, S. E. & Kolter, R. DNA as a nutrient: Novel role for bacterial competence gene homologs. J. Bacteriol. 183, 6288-6293 (2001).
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6288-6293
-
-
Finkel, S.E.1
Kolter, R.2
-
11
-
-
0029083946
-
Programmed cell death in bacteria: Proteic plasmid stabilization systems
-
Jensen, R. B. & Gerdes, K. Programmed cell death in bacteria: Proteic plasmid stabilization systems. Mol. Microbiol. 17, 205-210 (1995).
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 205-210
-
-
Jensen, R.B.1
Gerdes, K.2
-
12
-
-
0027372158
-
Plasmid addiction genes of bacteriophage P1: Doc, which causes cell death on curing of phage, and phd, which prevents host death when prophage is retained
-
Lehnherr, M., Maguin, E., Jafri, S. & Yarmolinsky, M. B. Plasmid addiction genes of bacteriophage P1: Doc, which causes cell death on curing of phage, and phd, which prevents host death when prophage is retained. J. Mol. Biol. 233, 414-428 (1993).
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 414-428
-
-
Lehnherr, M.1
Maguin, E.2
Jafri, S.3
Yarmolinsky, M.B.4
-
13
-
-
0141707105
-
Toxins-antitoxins: Plasmid maintenance, programmed cell death, and cell cycle arrest
-
Hayes, F. Toxins-antitoxins: Plasmid maintenance, programmed cell death, and cell cycle arrest. Science 301, 1496-1499 (2003).
-
(2003)
Science
, vol.301
, pp. 1496-1499
-
-
Hayes, F.1
-
14
-
-
0242407473
-
A novel family of Escherichia coli toxin-antidote gene pairs
-
Brown, J. M. & Shaw, K. J. A novel family of Escherichia coli toxin-antidote gene pairs. J. Bacteriol. 185, 6600-6608 (2003).
-
(2003)
J. Bacteriol.
, vol.185
, pp. 6600-6608
-
-
Brown, J.M.1
Shaw, K.J.2
-
15
-
-
0030008368
-
An Escherichia coli chromosomal "additional module" regulated by guanosine 3′5′-bispyrophosphate: A model for programmed bacterial cell death
-
Aizenmann, E., Engelberg-Kulka, H. & Glaser, G. An Escherichia coli chromosomal "additional module" regulated by guanosine 3′5′-bispyrophosphate: A model for programmed bacterial cell death. Proc. Natl Acad. Sci. USA 93, 6059-6063 (1996).
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 6059-6063
-
-
Aizenmann, E.1
Engelberg-Kulka, H.2
Glaser, G.3
-
16
-
-
0031816179
-
The Escherichia coli relBE genes belong to a new toxin-antitoxin gene family
-
Gotfredsen, M. & Gerdes, K. The Escherichia coli relBE genes belong to a new toxin-antitoxin gene family. Mol. Microbiol. 29, 1065-1076.
-
Mol. Microbiol.
, vol.29
, pp. 1065-1076
-
-
Gotfredsen, M.1
Gerdes, K.2
-
17
-
-
1642483754
-
Overproduction of the Lon protease triggers inhibition of translation in Escherichia coli: Involvement of the yefM-yoeB toxin-antitoxin system
-
Christensen, S. K. et al. Overproduction of the Lon protease triggers inhibition of translation in Escherichia coli: Involvement of the yefM-yoeB toxin-antitoxin system. Mol. Microbiol. 51, 1705-1717 (2004).
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 1705-1717
-
-
Christensen, S.K.1
-
18
-
-
17844370503
-
Prokaryotic toxin-antitoxin stress response loci
-
Gerdes, K., Christensen, S. K. & Lobner-Olsen, A. Prokaryotic toxin-antitoxin stress response loci. Nature Rev. Microbiol. 3, 371-382 (2005).
-
(2005)
Nature Rev. Microbiol.
, vol.3
, pp. 371-382
-
-
Gerdes, K.1
Christensen, S.K.2
Lobner-Olsen, A.3
-
19
-
-
0345421845
-
Studies on the life and death of bacteria. I. The senescent phase in aging cultures and the probable mechanisms involved
-
Steinhaus, E. A. & Birkeland, J. M. Studies on the life and death of bacteria. I. The senescent phase in aging cultures and the probable mechanisms involved. J. Bacteriol. 38, 249-261 (1939).
-
(1939)
J. Bacteriol.
, vol.38
, pp. 249-261
-
-
Steinhaus, E.A.1
Birkeland, J.M.2
-
20
-
-
2942650309
-
E. coli evolution during stationary phase
-
Zinser, E. R. & Kolter, R. K. E. coli evolution during stationary phase. Res. Microbiol. 155, 328-336 (2004).
-
(2004)
Res. Microbiol.
, vol.155
, pp. 328-336
-
-
Zinser, E.R.1
Kolter, R.K.2
-
21
-
-
0032859398
-
Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase
-
Zinser, E. R. & Kolter, R. Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase. J. Bacteriol. 181, 5800-5807 (1999).
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5800-5807
-
-
Zinser, E.R.1
Kolter, R.2
-
22
-
-
0033912882
-
Prolonged stationary phase incubation selects for lrp mutants in E. coli K-12
-
Zinser, E. R. & Kolter, R. Prolonged stationary phase incubation selects for lrp mutants in E. coli K-12. J. Bacteriol. 182, 4361-4365 (2000).
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4361-4365
-
-
Zinser, E.R.1
Kolter, R.2
-
23
-
-
0041817649
-
Bacterial evolution through the selective loss of beneficial genes: Trade-offs in expression involving two loci
-
Zinser, E. R., Schneider, D., Blot, M. & Kolter, R. Bacterial evolution through the selective loss of beneficial genes: Trade-offs in expression involving two loci. Genetics 164, 1271-1277 (2003).
-
(2003)
Genetics
, vol.164
, pp. 1271-1277
-
-
Zinser, E.R.1
Schneider, D.2
Blot, M.3
Kolter, R.4
-
25
-
-
0032792644
-
Use of single-strand conformation polymorphism analysis to examine the variability of the rpoS sequence of environmental isolates of salmonellae
-
Jordan, S. J., Dodd, C. E. & Stewart, G. S. Use of single-strand conformation polymorphism analysis to examine the variability of the rpoS sequence of environmental isolates of salmonellae. Appl. Environ. Microbiol. 65, 3582-3587 (1999).
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3582-3587
-
-
Jordan, S.J.1
Dodd, C.E.2
Stewart, G.S.3
-
26
-
-
0344235402
-
The growth advantage in stationary phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment
-
Farrell, M. J. & Finkel, S. E. The growth advantage in stationary phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. J. Bacteriol. 185, 7044-7052 (2003).
-
(2003)
J. Bacteriol.
, vol.185
, pp. 7044-7052
-
-
Farrell, M.J.1
Finkel, S.E.2
-
28
-
-
10044241658
-
RpoS-regulated genes of Escherichia coli identified by random lacZ fusion mutagenesis
-
Vijayakumar, S. R. V., Kirchhof, M. G., Patten, C. L. & Schellhorn, H. E. RpoS-regulated genes of Escherichia coli identified by random lacZ fusion mutagenesis. J. Bacteriol. 186, 8499-8507 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 8499-8507
-
-
Vijayakumar, S.R.V.1
Kirchhof, M.G.2
Patten, C.L.3
Schellhorn, H.E.4
-
29
-
-
13244259382
-
Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12
-
Patten, C. L., Kirchhof, M. G., Schertzberg, M. R., Morton, R. A. & Schellhorn, H. E. Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12. Mol. Gen. Genomics 272, 580-591 (2004).
-
(2004)
Mol. Gen. Genomics
, vol.272
, pp. 580-591
-
-
Patten, C.L.1
Kirchhof, M.G.2
Schertzberg, M.R.3
Morton, R.A.4
Schellhorn, H.E.5
-
30
-
-
8544232750
-
Growth versus maintenance: A trade-off dicated by RNA polymerase availability and σ factor competition
-
Nystrom, T. Growth versus maintenance: A trade-off dicated by RNA polymerase availability and σ factor competition. Mol. Microbiol. 54, 855-862 (2004).
-
(2004)
Mol. Microbiol.
, vol.54
, pp. 855-862
-
-
Nystrom, T.1
-
31
-
-
0036181664
-
rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses
-
Notley-McRobb, L., King, T. & Ferenci, T. rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses. J. Bacteriol. 184, 806-811 (2002).
-
(2002)
J. Bacteriol.
, vol.184
, pp. 806-811
-
-
Notley-McRobb, L.1
King, T.2
Ferenci, T.3
-
33
-
-
0034972742
-
Evolutionary cheating in E. coli stationary phase cultures
-
Vulic, M. & Kolter, R. Evolutionary cheating in E. coli stationary phase cultures. Genetics 158, 519-526 (2001).
-
(2001)
Genetics
, vol.158
, pp. 519-526
-
-
Vulic, M.1
Kolter, R.2
-
34
-
-
0036094368
-
Alcohol-induced delay of viability loss in stationary-phase cultures of Escherichia coli
-
Vulic, M. & Kolter, R. Alcohol-induced delay of viability loss in stationary-phase cultures of Escherichia coli. J. Bacteriol. 184, 2898-2905 (2002).
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2898-2905
-
-
Vulic, M.1
Kolter, R.2
-
35
-
-
4344634337
-
Positive selection for loss of RpoS function in Escherichia coli
-
Chen, G., Patten, C. L. & Schellhorn, H. E. Positive selection for loss of RpoS function in Escherichia coli. Mutat. Res. 554, 193-203 (2004).
-
(2004)
Mutat. Res.
, vol.554
, pp. 193-203
-
-
Chen, G.1
Patten, C.L.2
Schellhorn, H.E.3
-
36
-
-
0034071175
-
rpoS gene function is a disadvantage for Escherichia coli BJ4 during competitive colonization of the mouse large intestine
-
Krogfelt, K. A., Hjulgaard, M., Sorensen, K., Cohen, P. S. & Givskov, M. rpoS gene function is a disadvantage for Escherichia coli BJ4 during competitive colonization of the mouse large intestine. Infect. Immun. 68, 2518-2524 (2000).
-
(2000)
Infect. Immun.
, vol.68
, pp. 2518-2524
-
-
Krogfelt, K.A.1
Hjulgaard, M.2
Sorensen, K.3
Cohen, P.S.4
Givskov, M.5
-
37
-
-
0141817853
-
What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?
-
Ferenci, T. What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli? Trends Microbiol. 11, 457-461 (2003).
-
(2003)
Trends Microbiol.
, vol.11
, pp. 457-461
-
-
Ferenci, T.1
-
38
-
-
0034532082
-
Experimental analysis of molecular events during mutational periodic selections in bacterial evolution
-
Notley-McRobb, L. & Ferenci, T. Experimental analysis of molecular events during mutational periodic selections in bacterial evolution. Genetics 156, 1493-1501 (2000).
-
(2000)
Genetics
, vol.156
, pp. 1493-1501
-
-
Notley-McRobb, L.1
Ferenci, T.2
-
39
-
-
0010505083
-
Life and death in stationary phase
-
(eds Busby, S. J. W., Thomas, C. M. & Brown, N. L.) (Springer-Verlag, Berlin)
-
Finkel, S. E., Zinser, E. R., Gupta, S. & Kolter, R. Life and death in stationary phase. In Molecular Microbiology Vol. H 103 (eds Busby, S. J. W., Thomas, C. M. & Brown, N. L.) 3-16 (Springer-Verlag, Berlin, 1998).
-
(1998)
Molecular Microbiology
, vol.H103
, pp. 3-16
-
-
Finkel, S.E.1
Zinser, E.R.2
Gupta, S.3
Kolter, R.4
-
40
-
-
0037172966
-
SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness
-
Yeiser, B, Pepper, E. D., Goodman, M. F. & Finkel, S. E. SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness. Proc. Natl Acad. Sci. USA 99, 8737-8741 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 8737-8741
-
-
Yeiser, B.1
Pepper, E.D.2
Goodman, M.F.3
Finkel, S.E.4
-
41
-
-
0025886466
-
A constant rate of spontaneous mutation in DNA-based microbes
-
Drake, J. W. A constant rate of spontaneous mutation in DNA-based microbes. Proc. Natl Acad. Sci. USA 88, 7160-7164 (1991).
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 7160-7164
-
-
Drake, J.W.1
-
42
-
-
0031916242
-
Rates of spontaneous mutation
-
Drake, J. W., Charlesworth, B., Charlesworth, D. & Crow, J. F. Rates of spontaneous mutation. Genetics 148, 1667-1686 (1998).
-
(1998)
Genetics
, vol.148
, pp. 1667-1686
-
-
Drake, J.W.1
Charlesworth, B.2
Charlesworth, D.3
Crow, J.F.4
-
43
-
-
0035966784
-
Hypermutation in bacteria and other cellular systems
-
Bridges, B. A. Hypermutation in bacteria and other cellular systems. Phil. Trans. R. Soc. Lond. B Biol. Sci. 356, 29-36 (2001).
-
(2001)
Phil. Trans. R. Soc. Lond. B Biol. Sci.
, vol.356
, pp. 29-36
-
-
Bridges, B.A.1
-
44
-
-
0030924613
-
Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation
-
Torkelson, J. et al. Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation. EMBO J. 16, 3303-3311 (1997).
-
(1997)
EMBO J.
, vol.16
, pp. 3303-3311
-
-
Torkelson, J.1
-
45
-
-
0242442569
-
DNA mismatch repair: Molecular mechanisms and biological function
-
Schofield, M. J. & Hsieh, P. DNA mismatch repair: Molecular mechanisms and biological function. Annu. Rev. Microbiol. 57, 579-608 (2003).
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 579-608
-
-
Schofield, M.J.1
Hsieh, P.2
-
46
-
-
0036016788
-
Cooperation and competition in mismatch repair: Very short-patch repair and methyl-directed mismatch repair in Escherichia coli
-
Bhagwat, A. S. & Lieb, M. Cooperation and competition in mismatch repair: Very short-patch repair and methyl-directed mismatch repair in Escherichia coli. Mol. Microbiol. 44, 1421-1428 (2002).
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 1421-1428
-
-
Bhagwat, A.S.1
Lieb, M.2
-
47
-
-
0032803977
-
Growth phase-dependent regulation of Vsr endonuclease may contribute to 5-methylcytosine mutational hot spots in Escherichia coli
-
Macintyre, G., Pitsikas, P. & Cupples, C. G. Growth phase-dependent regulation of Vsr endonuclease may contribute to 5-methylcytosine mutational hot spots in Escherichia coli. J. Bacteriol. 181, 4435-4436 (1999).
-
(1999)
J. Bacteriol.
, vol.181
, pp. 4435-4436
-
-
Macintyre, G.1
Pitsikas, P.2
Cupples, C.G.3
-
48
-
-
0026637946
-
Initiation of methyl-directed mismatch repair
-
Au, K. G, Welsh, K. & Modrich, P. Initiation of methyl-directed mismatch repair. J. Biol. Chem. 267, 12142-12148 (1992).
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 12142-12148
-
-
Au, K.G.1
Welsh, K.2
Modrich, P.3
-
49
-
-
0019367342
-
Escherichia coli K-12 clones that overproduce dam methylase are hypermutable
-
Herman, G. E. & Modrich, P. Escherichia coli K-12 clones that overproduce dam methylase are hypermutable. J. Bacteriol. 145, 644-646 (1981).
-
(1981)
J. Bacteriol.
, vol.145
, pp. 644-646
-
-
Herman, G.E.1
Modrich, P.2
-
50
-
-
0033166541
-
Mismatch repair is diminished during stationary phase mutation
-
Harris, R. S., et al. Mismatch repair is diminished during stationary phase mutation. Mutat. Res. 437, 51-60 (1999).
-
(1999)
Mutat. Res.
, vol.437
, pp. 51-60
-
-
Harris, R.S.1
-
51
-
-
0030987686
-
Mismatch repair protein MutL becomes limiting during stationary-phase mutation
-
Harris, R. S. et al. Mismatch repair protein MutL becomes limiting during stationary-phase mutation. Genes Dev. 11, 2426-2437 (1997).
-
(1997)
Genes Dev.
, vol.11
, pp. 2426-2437
-
-
Harris, R.S.1
-
52
-
-
0033624613
-
Reduction of GC→TA transversion mutation by overexpression of MutS in Escherichia coli K-12
-
Zhao, J. & Winkler, M. E. Reduction of GC→TA transversion mutation by overexpression of MutS in Escherichia coli K-12. J. Bacteriol. 182, 5025-5028 (2000).
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5025-5028
-
-
Zhao, J.1
Winkler, M.E.2
-
53
-
-
0037849904
-
Stress-induced mutagensis in bacteria
-
Bjedov, I. et al. Stress-induced mutagensis in bacteria. Science 300, 1404-1409 (2003).
-
(2003)
Science
, vol.300
, pp. 1404-1409
-
-
Bjedov, I.1
-
54
-
-
0028799986
-
Analysis of cell size and DNA content in exponentially growing and stationary phase batch cultures of Escherichia coli
-
Akerlund, T., Nordstrom, K. & Bernander, R. Analysis of cell size and DNA content in exponentially growing and stationary phase batch cultures of Escherichia coli. J. Bacteriol. 177, 6791-6797 (1995).
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6791-6797
-
-
Akerlund, T.1
Nordstrom, K.2
Bernander, R.3
-
55
-
-
0035997344
-
Error-prone repair DNA polymerases in prokaryotes and eukaryotes
-
Goodman, M. F. Error-prone repair DNA polymerases in prokaryotes and eukaryotes. Annu. Rev. Biochem. 71, 17-50 (2002).
-
(2002)
Annu. Rev. Biochem.
, vol.71
, pp. 17-50
-
-
Goodman, M.F.1
-
56
-
-
0021723028
-
Competition between isogenic mutS and mut* populations of Escherichia coli K-12 in continuously growing cultures
-
Trobner, W. & Piechocki, R. Competition between isogenic mutS and mut* populations of Escherichia coli K-12 in continuously growing cultures. Mol. Gen. Genet. 198, 175-176 (1984).
-
(1984)
Mol. Gen. Genet.
, vol.198
, pp. 175-176
-
-
Trobner, W.1
Piechocki, R.2
-
57
-
-
31544477018
-
Competition between high and low mutating strains of Escherichia coli
-
Chao, L. and Cox, E. C. Competition between high and low mutating strains of Escherichia coli. Evolution 15, 931-942 (1998).
-
(1998)
Evolution
, vol.15
, pp. 931-942
-
-
Chao, L.1
Cox, E.C.2
-
58
-
-
0016188276
-
Selection of high mutation rates in chemostats
-
Cox, E. C. & Gibson, T. C. Selection of high mutation rates in chemostats. Genetics 77, 169-184 (1974).
-
(1974)
Genetics
, vol.77
, pp. 169-184
-
-
Cox, E.C.1
Gibson, T.C.2
-
59
-
-
0016228444
-
Mutagenesis by mutator gene mutH1 in continuous cultures of Escherichia coli
-
Nestmann, E. R. & Hill, R. F. Mutagenesis by mutator gene mutH1 in continuous cultures of Escherichia coli. J. Bacteriol. 119, 33-35 (1974).
-
(1974)
J. Bacteriol.
, vol.119
, pp. 33-35
-
-
Nestmann, E.R.1
Hill, R.F.2
-
60
-
-
0030620273
-
Evolution of high mutation rates in experimental populations of E. coli
-
Sniegowski, P. D., Gerrish, P. J. & Lenski, R. E. Evolution of high mutation rates in experimental populations of E. coli. Nature 387, 703-705 (1997).
-
(1997)
Nature
, vol.387
, pp. 703-705
-
-
Sniegowski, P.D.1
Gerrish, P.J.2
Lenski, R.E.3
-
61
-
-
0036811766
-
Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations
-
Shaver, A. C. et al. Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations. Genetics 162, 557-566 (2002).
-
(2002)
Genetics
, vol.162
, pp. 557-566
-
-
Shaver, A.C.1
-
62
-
-
1842483292
-
Evolution: Bacterial mutation in stationary phase
-
Sniegowski, P. Evolution: Bacterial mutation in stationary phase. Curr. Biol. 14, R245-R246 (2004).
-
(2004)
Curr. Biol.
, vol.14
-
-
Sniegowski, P.1
-
63
-
-
1942475764
-
Involvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida
-
Tegova, R., Tover, A., Tarassova, K., Tark, M. & Kivisaar, M. Involvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida. J. Bacteriol. 186, 2735-2744 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2735-2744
-
-
Tegova, R.1
Tover, A.2
Tarassova, K.3
Tark, M.4
Kivisaar, M.5
-
64
-
-
1642267937
-
Polymerases leave fingerprints: Analysis of the mutational spectrum in Escherichia coli rpoB to assess the role of polymerase IV in spontaneous mutation
-
Wolff, E., Kim, M., Hu, K., Yang, H. & Miller, J. H. Polymerases leave fingerprints: Analysis of the mutational spectrum in Escherichia coli rpoB to assess the role of polymerase IV in spontaneous mutation. J. Bacteriol. 186, 2900-2905 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2900-2905
-
-
Wolff, E.1
Kim, M.2
Hu, K.3
Yang, H.4
Miller, J.H.5
-
65
-
-
0347416710
-
Error-prone DNA polymerases: When making a mistake is the only way to get ahead
-
Rattray, A. J & Strathern, J. N. Error-prone DNA polymerases: When making a mistake is the only way to get ahead. Annu. Rev. Genet 37, 31-66 (2003).
-
(2003)
Annu. Rev. Genet
, vol.37
, pp. 31-66
-
-
Rattray, A.J.1
Strathern, J.N.2
-
66
-
-
2542440567
-
Error-prone replication for better or worse
-
Tippin, B., Pham, P. & Goodman, M. F. Error-prone replication for better or worse. Trends Microbiol. 12, 288-295 (2004).
-
(2004)
Trends Microbiol.
, vol.12
, pp. 288-295
-
-
Tippin, B.1
Pham, P.2
Goodman, M.F.3
-
67
-
-
10444253273
-
Stress responses and genetic variation in bacteria
-
Foster, P. L. Stress responses and genetic variation in bacteria. Mutation Res. 569, 3-11 (2005).
-
(2005)
Mutation Res.
, vol.569
, pp. 3-11
-
-
Foster, P.L.1
-
68
-
-
0142062024
-
Error-prone DNA polymerase IV is controlled by the stress-response σ factor, RpoS, in Escherichia coli
-
Layton, J. C. & Foster, P. L. Error-prone DNA polymerase IV is controlled by the stress-response σ factor, RpoS, in Escherichia coli. Mol. Microbiol. 50, 549-561 (2003).
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 549-561
-
-
Layton, J.C.1
Foster, P.L.2
-
69
-
-
2942639702
-
Survival versus maintenance of genetic stability: A conflict of priorities during stress
-
Matic, I., Taddei, F. & Radman, M. Survival versus maintenance of genetic stability: A conflict of priorities during stress Res. Microbiol. 155, 337-341 (2004).
-
(2004)
Res. Microbiol.
, vol.155
, pp. 337-341
-
-
Matic, I.1
Taddei, F.2
Radman, M.3
-
70
-
-
0141453385
-
Stationary phase mutagenesis: Mechanisms that accelerate adaptation of microbial populations under environmental stress
-
Kivisaar, M. Stationary phase mutagenesis: Mechanisms that accelerate adaptation of microbial populations under environmental stress. Environ. Microbiol. 5, 814-827 (2003).
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 814-827
-
-
Kivisaar, M.1
-
71
-
-
0029860724
-
High mutation frequencies among Escherichia coli and Salmonella pathogens
-
LeClerc, J. E., Li, B., Payne, W. L. & Cebula, T. A. High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 274, 1208-1211 (1996).
-
(1996)
Science
, vol.274
, pp. 1208-1211
-
-
LeClerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
72
-
-
0036667438
-
Evolution of multi-gene segments in the mutS-rpoS intergenic region of Salmonella enterica serovar Typhimurium LT2
-
Kotewicz, M. L. et al. Evolution of multi-gene segments in the mutS-rpoS intergenic region of Salmonella enterica serovar Typhimurium LT2. Microbiology 148, 2531-2540 (2002).
-
(2002)
Microbiology
, vol.148
, pp. 2531-2540
-
-
Kotewicz, M.L.1
-
73
-
-
0037515830
-
Molecular analysis of mutS expression and mutation in natural isolates of pathogenic Escherichia coli
-
Li, B. et al. Molecular analysis of mutS expression and mutation in natural isolates of pathogenic Escherichia coli. Microbiology 149, 1323-1331 (2003).
-
(2003)
Microbiology
, vol.149
, pp. 1323-1331
-
-
Li, B.1
-
74
-
-
0020300666
-
Analysis of spontaneous deletions and gene amplification in the lac region of E. coli
-
Albertini, A. M., Hofer, M., Calos, M. P., Tlsty, T. D. & Miller, J. H. Analysis of spontaneous deletions and gene amplification in the lac region of E. coli. Cold Spring Herb. Symp. Quant. Biol. 47, 841-850 (1983).
-
(1983)
Cold Spring Herb. Symp. Quant. Biol.
, vol.47
, pp. 841-850
-
-
Albertini, A.M.1
Hofer, M.2
Calos, M.P.3
Tlsty, T.D.4
Miller, J.H.5
-
75
-
-
0032491390
-
Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon
-
Andersson, D. I., Slechta, E. S. & Roth, J. R. Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon. Science 282, 1133-1135 (1998).
-
(1998)
Science
, vol.282
, pp. 1133-1135
-
-
Andersson, D.I.1
Slechta, E.S.2
Roth, J.R.3
-
76
-
-
0037133168
-
Amplification-mutagenesis: Evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplification
-
Hendrickson, H., Slechta, E. S., Bergthorsson, U., Andersson, D. I. & Roth, J. R. Amplification-mutagenesis: Evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplification. Proc. Natl Acad. Sci. USA 99, 2164-2169 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 2164-2169
-
-
Hendrickson, H.1
Slechta, E.S.2
Bergthorsson, U.3
Andersson, D.I.4
Roth, J.R.5
-
77
-
-
0021153579
-
Gene amplifications in the lac region of E. coli
-
Tlsty, T. D., Albertini, A. M. & Miller, J. H. Gene amplifications in the lac region of E. coli. Cell 37, 217-224 (1984).
-
(1984)
Cell
, vol.37
, pp. 217-224
-
-
Tlsty, T.D.1
Albertini, A.M.2
Miller, J.H.3
-
78
-
-
0023334462
-
Genetic rearrangements and gene amplification in E. coli: DNA sequences at the junctures of amplified gene fusions
-
Whoriskey, S. K., Nghiem, V. H., Leong, P. M., Masson, J. M. & Miller, J. H. Genetic rearrangements and gene amplification in E. coli: DNA sequences at the junctures of amplified gene fusions. Genes Dev. 1, 227-237 (1987).
-
(1987)
Genes Dev.
, vol.1
, pp. 227-237
-
-
Whoriskey, S.K.1
Nghiem, V.H.2
Leong, P.M.3
Masson, J.M.4
Miller, J.H.5
-
79
-
-
0017333825
-
Tandem genetic duplications in phage and bacteria
-
Anderson, R. P. & Roth, J. R. Tandem genetic duplications in phage and bacteria. Annu. Rev. Microbiol. 31, 473-505 (1977).
-
(1977)
Annu. Rev. Microbiol.
, vol.31
, pp. 473-505
-
-
Anderson, R.P.1
Roth, J.R.2
-
80
-
-
0024438949
-
Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources
-
Sonti, R. V. & Roth, J. Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources. Genetics 123, 19-28 (1989).
-
(1989)
Genetics
, vol.123
, pp. 19-28
-
-
Sonti, R.V.1
Roth, J.2
-
81
-
-
0025949333
-
Control of large chromosomal duplications in Escherichia coli by the mismatch repair system
-
Petit, M.-A., Dimpfl, J., Radman, M. & Echols, H. Control of large chromosomal duplications in Escherichia coli by the mismatch repair system. Genetics 129, 327-332 (1991).
-
(1991)
Genetics
, vol.129
, pp. 327-332
-
-
Petit, M.-A.1
Dimpfl, J.2
Radman, M.3
Echols, H.4
-
82
-
-
1542286935
-
DNA amplification and rearrangements in archival Salmonella enterica serovar typhimurium LT2 cultures
-
Porwollik, S. et al. DNA amplification and rearrangements in archival Salmonella enterica serovar typhimurium LT2 cultures. J. Bacteriol. 186, 1678-1682 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 1678-1682
-
-
Porwollik, S.1
-
83
-
-
0036209592
-
Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, no single-nucleotide polymorphisms
-
Kudva, I. T. et al. Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, no single-nucleotide polymorphisms. J. Bacteriol. 184, 1873-1879 (2002).
-
(2002)
J. Bacteriol.
, vol.184
, pp. 1873-1879
-
-
Kudva, I.T.1
-
84
-
-
0037168538
-
Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli
-
Welch, R. A. et al. Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc. Natl Acad. Sci. USA 99, 17020-17024 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 17020-17024
-
-
Welch, R.A.1
-
85
-
-
3843116530
-
Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917
-
Grozdanov, L. et al. Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917. J. Bacteriol. 186, 5432-5441 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 5432-5441
-
-
Grozdanov, L.1
-
86
-
-
19044384376
-
Genomic comparisons among Escherichia coli strains B, K-12, and O157:H7 using IS elements as molecular markers
-
Schneider, D. et al. Genomic comparisons among Escherichia coli strains B, K-12, and O157:H7 using IS elements as molecular markers. BMC Microbiol. 2, 18 (2002).
-
(2002)
BMC Microbiol.
, vol.2
, pp. 18
-
-
Schneider, D.1
-
87
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F. R. et al. The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1474 (1997).
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
-
88
-
-
0031876504
-
Repeated evolution of an acetate-crossfeeding polymorphism in long-term populations of Escherichia coli
-
Treves, D. S., Manning, S. & Adams, J. Repeated evolution of an acetate-crossfeeding polymorphism in long-term populations of Escherichia coli. Mol. Biol. Evol. 15, 789-797 (1998).
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 789-797
-
-
Treves, D.S.1
Manning, S.2
Adams, J.3
-
89
-
-
2942659270
-
Microbial evolution in laboratory environments
-
Adams, J. Microbial evolution in laboratory environments. Res. Microbiol. 155, 311-318 (2004).
-
(2004)
Res. Microbiol.
, vol.155
, pp. 311-318
-
-
Adams, J.1
-
90
-
-
0025527885
-
Experimental studies of natural selection in bacteria
-
Dykhuisen, D. E. Experimental studies of natural selection in bacteria. Annu. Rev. Ecol. Syst. 21, 373-398 (1990).
-
(1990)
Annu. Rev. Ecol. Syst.
, vol.21
, pp. 373-398
-
-
Dykhuisen, D.E.1
-
91
-
-
0028605344
-
Clonal divergence in E. coli as a result of recombination, not mutation
-
Guttman D. S. & Dykhuisen, D. E. Clonal divergence in E. coli as a result of recombination, not mutation. Science 266, 1380-1383 (1994).
-
(1994)
Science
, vol.266
, pp. 1380-1383
-
-
Guttman, D.S.1
Dykhuisen, D.E.2
-
92
-
-
0037417962
-
Parallel changes in gene expression after 20,000 generations of evolution in E. coli
-
Cooper, T. E., Rozen, D. E. & Lenski, R. E. Parallel changes in gene expression after 20,000 generations of evolution in E. coli. Proc. Natl Acad. Sci. USA 100, 1072-1077 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 1072-1077
-
-
Cooper, T.E.1
Rozen, D.E.2
Lenski, R.E.3
-
93
-
-
0033442083
-
Ecological strategies and fitness tradeoffs in E. coli mutants adapted to prolonged starvation
-
Vasi, F. K. & Lenski, R. E. Ecological strategies and fitness tradeoffs in E. coli mutants adapted to prolonged starvation. J. Genet. 78, 43-39 (1999).
-
(1999)
J. Genet.
, vol.78
, pp. 39-43
-
-
Vasi, F.K.1
Lenski, R.E.2
-
94
-
-
0038441327
-
Evolution experiments with microorganisms: The dynamics and genetic bases of adaptation
-
Elena, S. F. & Lenski, R. E. Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation. Nature Rev. Genet. 4, 457-469 (2003).
-
(2003)
Nature Rev. Genet.
, vol.4
, pp. 457-469
-
-
Elena, S.F.1
Lenski, R.E.2
-
95
-
-
0031966353
-
Evolution of competitive fitness in experimental populations of E. coli: What makes one genotype a better competitor than another?
-
Lenski, R. E. et al. Evolution of competitive fitness in experimental populations of E. coli: What makes one genotype a better competitor than another? Antonie van Leeuwenhoek 73, 35-47 (1998).
-
(1998)
Antonie Van Leeuwenhoek
, vol.73
, pp. 35-47
-
-
Lenski, R.E.1
-
96
-
-
2942632968
-
Dynamics of insertion sequence elements during experimental evolution of bacteria
-
Schneider, D. & Lenski, R. E. Dynamics of insertion sequence elements during experimental evolution of bacteria. Res. Microbiol. 155, 319-327 (2004).
-
(2004)
Res. Microbiol.
, vol.155
, pp. 319-327
-
-
Schneider, D.1
Lenski, R.E.2
-
97
-
-
4544283017
-
Genomic changes arising in long-term stab cultures of Escherichia coli
-
Faure, D. et al. Genomic changes arising in long-term stab cultures of Escherichia coli. J. Bacteriol. 186, 6437-6442 (2004).
-
(2004)
J. Bacteriol.
, vol.186
, pp. 6437-6442
-
-
Faure, D.1
-
98
-
-
0028354540
-
Insertion sequence-related genetic variation in resting Escherichia coli K-12
-
Naas, T., Blot, M., Fitch, W. M. & Arber, W. Insertion sequence-related genetic variation in resting Escherichia coli K-12. Genetics 136, 721-730 (1994).
-
(1994)
Genetics
, vol.136
, pp. 721-730
-
-
Naas, T.1
Blot, M.2
Fitch, W.M.3
Arber, W.4
-
99
-
-
0035972875
-
Genetic variability among archival cultures of Salmonella typhimurium
-
Edwards, K., Linetsky, I. Hueser, C. & Eisenstark, A. Genetic variability among archival cultures of Salmonella typhimurium. FEMS Microbiol. Lett. 199, 215-219 (2001).
-
(2001)
FEMS Microbiol. Lett.
, vol.199
, pp. 215-219
-
-
Edwards, K.1
Linetsky, I.2
Hueser, C.3
Eisenstark, A.4
-
100
-
-
0033902954
-
rpoS mutants in archival cultures of Salmonella enterica serovar Typhimurium
-
Sutton, A., Buencamino, R. & Eisenstark, A. rpoS mutants in archival cultures of Salmonella enterica serovar Typhimurium. J. Bacteriol. 182, 4375-4379 (2000).
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4375-4379
-
-
Sutton, A.1
Buencamino, R.2
Eisenstark, A.3
-
101
-
-
0042796228
-
Carbon and nitrogen substrate utilization by archival Salmonella typhimurium LT2 cells
-
Tracy, B. S., Edwards, K. K. & Eisenstark, A. Carbon and nitrogen substrate utilization by archival Salmonella typhimurium LT2 cells. BMC Evol. Biol. 2, 14 (2002).
-
(2002)
BMC Evol. Biol.
, vol.2
, pp. 14
-
-
Tracy, B.S.1
Edwards, K.K.2
Eisenstark, A.3
|