Genomic evolution during a 10,000-generation experiment with bacteria

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 7, 1999, Pages 3807-3812

  Papadopoulos, Dimitri ^a   Schneider, Dominique ^b   Meier Eiss, Jessica ^a   Arber, Werner ^a   Lenski, Richard E ^c   Blot, Michel ^a,b  

^a UNIVERSITY OF BASEL   (Switzerland)

^b UNIV GRENOBLE ALPES   (France)

^c MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

Escherichia coli; Experimental evolution; Insertion sequence elements; Molecular evolution; Morphological evolution

Indexed keywords

ARTICLE; BIODIVERSITY; DNA FINGERPRINTING; DNA TRANSPOSITION; GENE INSERTION SEQUENCE; GENE REARRANGEMENT; GENETIC VARIABILITY; GENOME; MOLECULAR EVOLUTION; NONHUMAN; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

CELL DIVISION; ESCHERICHIA COLI; EVOLUTION; GENOME, BACTERIAL; MODELS, GENETIC; PHYLOGENY; TIME;

ESCHERICHIA COLI;

EID: 0033616661     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.7.3807     Document Type: Article

References (36)

1. Naas, T., Blot, M., Fitch, W. M. & Arber, W. (1994) Genetics 136, 721-730.
2. Naas, T., Blot, M., Fitch, W. M. & Arber, W. (1995) Mol. Biol. Evol. 12, 198-207.
3. Lenski, R. E., Rose, M. R., Simpson, S. C. & Tadler, S. C. (1991) Am. Nat. 138, 1315-1341.
4. Lenski, R. E. & Travisano, M. (1994) Proc. Natl. Acad. Sci. USA 91, 6808-6814.
5. Sniegowski, P. D., Gerrish, P. J. & Lenski, R. E. (1997) Nature (London) 387, 703-705.
6. Swofford, D. L. (1993) PAUP: Phylogenetic Analysis Using Parsimony (Illinois Natural History Survey, Champaign, IL), Version 3.1.1.
7. Maynard Smith, J. & Haigh, J. (1974) Genet. Res. 23, 23-35.
8. Kaplan, N. L., Hudson, R. R. & Langley, C. H. (1989) Genetics 123, 887-899.
9. Begun, D. J. & Aquadro, C. F. (1992) Nature (London) 356, 519-520.
10. Kimura, M. & Ohta, T. (1969) Genetics 61, 763-771.
11. Elena, S. F., Cooper, V. S. & Lenski, R. E. (1996) Science 272, 1802-1804.
12. Gerrish, P. J. & Lenski, R. E. (1998) Genetica 102, 127-144.
13. Fitch, W. M., Bush, R. M., Bender, C. A. & Cox, N. J. (1997) Proc. Natl. Acad. Sci. USA 94, 7712-7718.
14. Cann, R. L., Stoneking, M. & Wilson, A. C. (1987) Nature (London) 325, 31-36.
15. Ayala, F. J. (1995) Science 270, 1930-1936.
16. Atwood, K. C., Schneider, L. K. & Ryan, F. J. (1951) Proc. Natl. Acad. Sci. USA 37, 146-155.
17. Dykhuizen, D. E. (1992) in Encyclopedia of Microbiology, ed. Lederberg, J. (Academic, San Diego), Vol. 3, pp. 351-355.
18. Gerrish, P. J. (1998) Ph.D. dissertation (Michigan State University, East Lansing).
19. Rice, W. R. (1989) Evolution 43, 223-225.
20. Kimura, M. & Crow, J. F. (1964) Genetics 49, 725-738.
21. Ewens, W. J. (1972) Theor. Pop. Biol. 3, 87-112.
22. Ohta, T. (1976) Theor. Pop. Biol. 10, 254-275.
23. Charlesworth, B. (1990) Genet. Res. 55, 199-221.
24. Sawyer, S. A., Dykhuizen, D. E., DuBose, R. F., Green, L., Mutangadura-Mhlanga, T., Wolczyk, D. F & Hartl, D. L. (1987) Genetics 115, 51-63.
25. Kidwell, M. & Lisch, D. (1997) Proc. Natl. Acad. Sci. USA 94, 7704-7711.
26. Shapiro, J. A. & Higgins, N. P. (1989) J. Bacteriol. 171, 5975-5986.
27. Hall, B. G. (1990) Genetics 126, 5-16.
28. Rainey, P. B., Moxon, E. R. & Thompson, I. P. (1993) Adv. Microb. Ecol. 13, 263-300.
29. Blot, M. (1994) Genetica 93, 5-12.
30. Wilson, A. C., Carlson, S. S. & White, T. J. (1977) Annu. Rev. Biochem. 46, 573-639.
31. Shaffer, H. B., Clark, J. M. & Kraus, F. (1991) Syst. Zool. 40, 284-303.
32. Avise, J. C. (1994) Molecular Markers, Natural History and Evolution (Chapman & Hall, New York).
33. Wallis, M. (1996) J. Mol. Evol. 43, 93-100.
34. Omland, K. E. (1997) Evolution 51, 1381-1393.
35. Bull, J. J., Badgett, M. R., Wichman, H. A., Huelsenbeck, J. P., Hillis, D. M., Gulati, A., Ho, C. & Molineux, I. J. (1997) Genetics 147, 1497-1507.
36. Travisano, M. & Lenski, R. E. (1996) Genetics 143, 15-26.