메뉴 건너뛰기




Volumn 2, Issue 2, 1999, Pages 208-213

Regulation by nutrient limitation

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; BACTERIAL MEMBRANE; ESCHERICHIA COLI; NONHUMAN; NUTRITIONAL STATUS; OUTER MEMBRANE; REVIEW; STARVATION;

EID: 0033118890     PISSN: 13695274     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-5274(99)80036-8     Document Type: Article
Times cited : (111)

References (47)
  • 1
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod J: The growth of bacterial cultures. Annu Rev Microbiol 1949, 3:371-394.
    • (1949) Annu Rev Microbiol , vol.3 , pp. 371-394
    • Monod, J.1
  • 2
    • 0032486577 scopus 로고    scopus 로고
    • Kinetic models for the growth of Escherichia coli with mixtures of sugars under carbon-limited conditions
    • Lendenmann U, Egli T: Kinetic models for the growth of Escherichia coli with mixtures of sugars under carbon-limited conditions. Biotech Bioeng 1998, 59:99-107. This paper stresses the important co-metabolic capabilities of nutrient-limited bacteria.
    • (1998) Biotech Bioeng , vol.59 , pp. 99-107
    • Lendenmann, U.1    Egli, T.2
  • 3
    • 0031426064 scopus 로고    scopus 로고
    • Microbial physiology and ecology of slow growth
    • Koch AL: Microbial physiology and ecology of slow growth. Microbiol Mol Biol Rev 1997, 61:305-318. This review provides a classic black-box approach to bacterial physiology at low nutrient levels.
    • (1997) Microbiol Mol Biol Rev , vol.61 , pp. 305-318
    • Koch, A.L.1
  • 4
    • 0031670733 scopus 로고    scopus 로고
    • Nutrient uptake by microorganisms according to kinetic parameters from theory as related to cytoarchitecture
    • Button DK: Nutrient uptake by microorganisms according to kinetic parameters from theory as related to cytoarchitecture. Microbiol Mol Biol Rev 1998, 62:636-645.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 636-645
    • Button, D.K.1
  • 5
    • 0020696807 scopus 로고
    • Physiological responses to nutrient limitation
    • Harder W, Dijkhuizen L: Physiological responses to nutrient limitation. Annu Rev Microbiol 1983, 37:1-24.
    • (1983) Annu Rev Microbiol , vol.37 , pp. 1-24
    • Harder, W.1    Dijkhuizen, L.2
  • 6
    • 0029779668 scopus 로고    scopus 로고
    • Global analysis of proteins synthesized during phosphorus restriction in Escherichia coli
    • Vanbogelen RA, Olson ER, Wanner BL, Neidhardt FC: Global analysis of proteins synthesized during phosphorus restriction in Escherichia coli. J Bacteriol 1996, 178:4344-4366.
    • (1996) J Bacteriol , vol.178 , pp. 4344-4366
    • Vanbogelen, R.A.1    Olson, E.R.2    Wanner, B.L.3    Neidhardt, F.C.4
  • 7
    • 0030596516 scopus 로고    scopus 로고
    • Salmonella typhimurium apparently perceives external nitrogen limitation as internal glutamine limitation
    • Ikeda TP, Shauger AE, Kustu S: Salmonella typhimurium apparently perceives external nitrogen limitation as internal glutamine limitation. J Mol Biol 1996, 259:589-607.
    • (1996) J Mol Biol , vol.259 , pp. 589-607
    • Ikeda, T.P.1    Shauger, A.E.2    Kustu, S.3
  • 8
    • 0031752273 scopus 로고    scopus 로고
    • Pathway choice in glutamate synthesis in Escherichia coli
    • Helling RB: Pathway choice in glutamate synthesis in Escherichia coli. J Bacteriol 1998, 180:4571-4575.
    • (1998) J Bacteriol , vol.180 , pp. 4571-4575
    • Helling, R.B.1
  • 9
    • 0031882560 scopus 로고    scopus 로고
    • To be or not to be - The ultimate decision of the growth-arrested bacterial cell
    • Nyström T: To be or not to be - The ultimate decision of the growth-arrested bacterial cell. FEMS Microbiol Rev 1998, 21:283-290. An interesting overview of regulatory networks in stationary phase.
    • (1998) FEMS Microbiol Rev , vol.21 , pp. 283-290
    • Nyström, T.1
  • 10
    • 0028899145 scopus 로고
    • The trials and tribulations of growth arrest
    • Nyström T: The trials and tribulations of growth arrest. Trends Microbiol 1995, 3:131-136.
    • (1995) Trends Microbiol , vol.3 , pp. 131-136
    • Nyström, T.1
  • 11
    • 0000073165 scopus 로고    scopus 로고
    • Regulation of gene expression during entry into stationary phase
    • Edited by Neidhardt FC. Washington, DC: ASM Press
    • Hengge-Aronis R: Regulation of gene expression during entry into stationary phase. In Escherichia Coli and Salmonella: Cellular and Molecular Biology, Edn 2. Edited by Neidhardt FC. Washington, DC: ASM Press; 1996:1497-1512.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology, Edn 2 , pp. 1497-1512
    • Hengge-Aronis, R.1
  • 12
    • 0028048576 scopus 로고
    • Between feast and famine: Endogenous inducer synthesis in the adaptation of Escherichia coli to growth with limiting carbohydrates
    • Death A, Ferenci T: Between feast and famine: Endogenous inducer synthesis in the adaptation of Escherichia coli to growth with limiting carbohydrates. J Bacteriol 1994, 176:5101-5107.
    • (1994) J Bacteriol , vol.176 , pp. 5101-5107
    • Death, A.1    Ferenci, T.2
  • 13
    • 0029924025 scopus 로고    scopus 로고
    • Induction of RpoS-dependent functions in glucose-limited continuous culture: What level of nutrient limitation induces the stationary phase of Escherichia coli?
    • Notley L, Ferenci T: Induction of RpoS-dependent functions in glucose-limited continuous culture: What level of nutrient limitation induces the stationary phase of Escherichia coli? J Bacteriol 1996, 178:1465-1468.
    • (1996) J Bacteriol , vol.178 , pp. 1465-1468
    • Notley, L.1    Ferenci, T.2
  • 14
    • 0031719199 scopus 로고    scopus 로고
    • Growth kinetics of suspended microbial cells: From single-substrate-controlled growth to mixed-substrate kinetics
    • Kovarova-Kovar K, Egli T: Growth kinetics of suspended microbial cells: From single-substrate-controlled growth to mixed-substrate kinetics. Microbiol Mol Biol Rev 1998, 62:646-666. Important views on the kinetic properties of bacteria adapting under nutrient limitation, their physiological plasticity and their propensity for co-metabolic strategies at low nutrient levels.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 646-666
    • Kovarova-Kovar, K.1    Egli, T.2
  • 15
    • 0002241912 scopus 로고
    • Microbial regulatory mechanisms at low nutrient concentrations as studied in a chemostat
    • Edited by Shilo M. Berlin; Dahlem Konferenzen
    • Matin A: Microbial regulatory mechanisms at low nutrient concentrations as studied in a chemostat. In Strategies of Microbial Life in Extreme Environments. Edited by Shilo M. Berlin; Dahlem Konferenzen; 1979:323-339.
    • (1979) Strategies of Microbial Life in Extreme Environments , pp. 323-339
    • Matin, A.1
  • 16
    • 0028932110 scopus 로고
    • Differential expression of mal genes under cAMP and endogenous inducer control in nutrient stressed Escherichia coli
    • Notley L, Ferenci T: Differential expression of mal genes under cAMP and endogenous inducer control in nutrient stressed Escherichia coli. Mol Microbiol 1995, 160:121-129.
    • (1995) Mol Microbiol , vol.160 , pp. 121-129
    • Notley, L.1    Ferenci, T.2
  • 17
    • 0024075420 scopus 로고
    • Differential regulation by cyclic AMP of starvation protein synthesis in Escherichia coli
    • Schultz JE, Latter GI, Matin A: Differential regulation by cyclic AMP of starvation protein synthesis in Escherichia coli. J Bacteriol 1988, 170:3903-3909.
    • (1988) J Bacteriol , vol.170 , pp. 3903-3909
    • Schultz, J.E.1    Latter, G.I.2    Matin, A.3
  • 18
    • 0030839962 scopus 로고    scopus 로고
    • The relationship between external glucose concentration and cAMP levels inside Escherichia coli - Implications for models of phosphotransferase-mediated regulation of adenylate cyclase
    • Notley-Mcrobb L, Death A, Ferenci T: The relationship between external glucose concentration and cAMP levels inside Escherichia coli - Implications for models of phosphotransferase-mediated regulation of adenylate cyclase. Microbiology 1997, 143:1909-1918. A revealing experimental definition of threshold concentrations triggering different regulatory states, particularly significant for the hundreds of genes regulated by cAMP.
    • (1997) Microbiology , vol.143 , pp. 1909-1918
    • Notley-Mcrobb, L.1    Death, A.2    Ferenci, T.3
  • 20
    • 0031859738 scopus 로고    scopus 로고
    • Regulation of porin-mediated outer membrane permeability by nutrient limitation in Escherichia coli
    • Liu XQ, Ferenci T: Regulation of porin-mediated outer membrane permeability by nutrient limitation in Escherichia coli. J Bacteriol 1998, 180:3917-3922. An unexpected degree of regulation of porins under nutrient limitation was found, as well as an intricate expression pattern not easily explained by conventional models of porin regulation.
    • (1998) J Bacteriol , vol.180 , pp. 3917-3922
    • Liu, X.Q.1    Ferenci, T.2
  • 21
    • 0032499682 scopus 로고    scopus 로고
    • Ammonia acquisition in enteric bacteria - Physiological role of the ammonium/methylammonium transport B (AmtB) protein
    • Soupene E, He LH, Yan DL, Kustu S: Ammonia acquisition in enteric bacteria - Physiological role of the ammonium/methylammonium transport B (AmtB) protein. Proc Natl Acad Sci USA 1998, 95:7030-7034.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 7030-7034
    • Soupene, E.1    He, L.H.2    Yan, D.L.3    Kustu, S.4
  • 22
    • 0027457784 scopus 로고
    • Derepression of LamB protein facilitates outer membrane permeation of carbohydrates into Escherichia coli under conditions of nutrient stress
    • Death A, Notley L, Ferenci T: Derepression of LamB protein facilitates outer membrane permeation of carbohydrates into Escherichia coli under conditions of nutrient stress. J Bacteriol 1993, 175:1475-1483.
    • (1993) J Bacteriol , vol.175 , pp. 1475-1483
    • Death, A.1    Notley, L.2    Ferenci, T.3
  • 23
    • 0027536158 scopus 로고
    • Induction of the lambda receptor is essential for effective uptake of trehalose in Escherichia coli
    • Klein W, Boos W: Induction of the lambda receptor is essential for effective uptake of trehalose in Escherichia coli. J Bacteriol 1993, 175:1682-1686.
    • (1993) J Bacteriol , vol.175 , pp. 1682-1686
    • Klein, W.1    Boos, W.2
  • 24
    • 0031973725 scopus 로고    scopus 로고
    • Differential expression of the OmpF and OmpC porin proteins in Escherichia coli K-12 depends upon the level of active OmpR
    • Lan CY, Igo MM: Differential expression of the OmpF and OmpC porin proteins in Escherichia coli K-12 depends upon the level of active OmpR. J Bacteriol 1998, 180:171-174.
    • (1998) J Bacteriol , vol.180 , pp. 171-174
    • Lan, C.Y.1    Igo, M.M.2
  • 25
    • 0032483501 scopus 로고    scopus 로고
    • Relative binding affinities of OmpR and OmpR-phosphate at the ompF and ompC regulatory sites
    • Head CG, Tardy A, Kenney LJ : Relative binding affinities of OmpR and OmpR-phosphate at the ompF and ompC regulatory sites. J Mol Biol 1998, 281:857-870.
    • (1998) J Mol Biol , vol.281 , pp. 857-870
    • Head, C.G.1    Tardy, A.2    Kenney, L.J.3
  • 26
    • 0030200309 scopus 로고    scopus 로고
    • Adaptation to life at micromolar nutrient levels: The regulation of Escherichia coli glucose transport by endoinduction and cAMP
    • Ferenci T: Adaptation to life at micromolar nutrient levels: The regulation of Escherichia coli glucose transport by endoinduction and cAMP. FEMS Microbiol Rev 1996, 18:301-317.
    • (1996) FEMS Microbiol Rev , vol.18 , pp. 301-317
    • Ferenci, T.1
  • 27
    • 0028798730 scopus 로고
    • Is Escherichia coli growing in glucose-limited chemostat culture able to utilize other sugars without lag
    • Lendenmann U, Egli T: Is Escherichia coli growing in glucose-limited chemostat culture able to utilize other sugars without lag. Microbiology 1995, 141:71-78.
    • (1995) Microbiology , vol.141 , pp. 71-78
    • Lendenmann, U.1    Egli, T.2
  • 28
    • 0016744341 scopus 로고
    • Regulation of nitrogen metabolism in Escherichia coli and Klebsiella aerogenes: Studies with the continuous-culture technique
    • Senior PJ: Regulation of nitrogen metabolism in Escherichia coli and Klebsiella aerogenes: Studies with the continuous-culture technique. J Bacteriol 1975, 123:407-418.
    • (1975) J Bacteriol , vol.123 , pp. 407-418
    • Senior, P.J.1
  • 29
    • 0031686598 scopus 로고    scopus 로고
    • Effect of slow growth on metabolism of Escherichia coli, as revealed by global metabolite pool ('metabolome') analysis
    • Tweeddale H, Notley-Mcrobb L, Ferenci T: Effect of slow growth on metabolism of Escherichia coli, as revealed by global metabolite pool ('metabolome') analysis. J Bacteriol 1998, 180:5109-5116. By following 70 major metabolite pools, this paper provided an illustration of how little we know of major metabolic changes associated with growth rate and glucose limitation.
    • (1998) J Bacteriol , vol.180 , pp. 5109-5116
    • Tweeddale, H.1    Notley-Mcrobb, L.2    Ferenci, T.3
  • 30
    • 0029842086 scopus 로고    scopus 로고
    • Transcriptional regulation of the proton-translocating ATPase (atplBEFHAGDC) operon of Escherichia coli - Control by cell growth rate
    • Kasimoglu E, Park SJ, Malek J, Tseng C, Gunsalus RP: Transcriptional regulation of the proton-translocating ATPase (atplBEFHAGDC) operon of Escherichia coli - Control by cell growth rate. J Bacteriol 1996, 178:5563-5567.
    • (1996) J Bacteriol , vol.178 , pp. 5563-5567
    • Kasimoglu, E.1    Park, S.J.2    Malek, J.3    Tseng, C.4    Gunsalus, R.P.5
  • 31
    • 0000640710 scopus 로고    scopus 로고
    • Modulation of chemical composition and other parameters of the cell by growth rate
    • Edited by Neidhardt FC. Washington, DC: ASM Press
    • Bremer H, Dennis PP: Modulation of chemical composition and other parameters of the cell by growth rate. In Escherichia Coli and Salmonella: Cellular and Molecular Biology, Edn 2. Edited by Neidhardt FC. Washington, DC: ASM Press; 1996:1553-1569.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology, Edn 2 , pp. 1553-1569
    • Bremer, H.1    Dennis, P.P.2
  • 32
    • 0031443321 scopus 로고    scopus 로고
    • Transcription regulation by initiating NTP concentration - rRNA synthesis in bacteria
    • Gaal T, Bartlett MS, Ross W, Turnbough CL Jr, Gourse RL: Transcription regulation by initiating NTP concentration - rRNA synthesis in bacteria. Science 1997, 278:2092-2097. A significant insight into 'growth-rate dependent control' of the translation apparatus on the basis of metabolite pool availability varying with different growth rates.
    • (1997) Science , vol.278 , pp. 2092-2097
    • Gaal, T.1    Bartlett, M.S.2    Ross, W.3    Turnbough C.L., Jr.4    Gourse, R.L.5
  • 33
    • 0031912637 scopus 로고    scopus 로고
    • Modulation of Escherichia coli adenylyl cyclase activity by catalytic-site mutants of protein IIA(glc) of the phosphoenolpyruvate-sugar phosphotransferase system
    • Reddy P, Kamireddi M: Modulation of Escherichia coli adenylyl cyclase activity by catalytic-site mutants of protein IIA(glc) of the phosphoenolpyruvate-sugar phosphotransferase system. J Bacteriol 1998, 180:732-736.
    • (1998) J Bacteriol , vol.180 , pp. 732-736
    • Reddy, P.1    Kamireddi, M.2
  • 35
    • 0028335964 scopus 로고
    • The glucose-starvation stimulon of Escherichia coli: Induced and repressed synthesis of enzymes of central metabolic pathways and role of acetyl phosphate in gene expression and starvation survival
    • Nyström T: The glucose-starvation stimulon of Escherichia coli: Induced and repressed synthesis of enzymes of central metabolic pathways and role of acetyl phosphate in gene expression and starvation survival. Mol Microbiol 1994, 12:833-843.
    • (1994) Mol Microbiol , vol.12 , pp. 833-843
    • Nyström, T.1
  • 36
    • 0031679842 scopus 로고    scopus 로고
    • Acetyl phosphate and the phosphorylation of OmpR are involved in the regulation of the cell division rate in Escherichia coli
    • Pruss BM: Acetyl phosphate and the phosphorylation of OmpR are involved in the regulation of the cell division rate in Escherichia coli. Arch Microbiol 1998, 170:141-146. A fascinating if incomplete glimpse into cross-regulation of growth rate by factors such as OmpR that are also involved in nutrient limitation-related regulation of porins.
    • (1998) Arch Microbiol , vol.170 , pp. 141-146
    • Pruss, B.M.1
  • 37
    • 0030972952 scopus 로고    scopus 로고
    • H-NS - A modulator of environmentally regulated gene expression
    • Atlung T, Ingmer H: H-NS - A modulator of environmentally regulated gene expression. Mol Microbiol 1997, 24:7-17.
    • (1997) Mol Microbiol , vol.24 , pp. 7-17
    • Atlung, T.1    Ingmer, H.2
  • 38
    • 0031573039 scopus 로고    scopus 로고
    • Molecular aspects of the E. coli nucleoid protein, H-NS - A central controller of gene-regulatory networks
    • Williams RM, Rimsky S: Molecular aspects of the E. coli nucleoid protein, H-NS - A central controller of gene-regulatory networks. FEMS Microbiol Lett 1997, 156:175-185.
    • (1997) FEMS Microbiol Lett , vol.156 , pp. 175-185
    • Williams, R.M.1    Rimsky, S.2
  • 39
    • 0029560549 scopus 로고
    • Glucose starvation stimulon of Escherichia coli - Role of integration host factor in starvation survival and growth phase-dependent protein synthesis
    • Nyström T: Glucose starvation stimulon of Escherichia coli - Role of integration host factor in starvation survival and growth phase-dependent protein synthesis. J Bacteriol 1995, 177:5707-5710.
    • (1995) J Bacteriol , vol.177 , pp. 5707-5710
    • Nyström, T.1
  • 40
    • 2642714953 scopus 로고    scopus 로고
    • The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control
    • Figueroa-Bossi N, Guérin M, Rahmouni R, Leng M, Bossi L: The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control. EMBO J 1998, 17:2359-2367
    • (1998) EMBO J , vol.17 , pp. 2359-2367
    • Figueroa-Bossi, N.1    Guérin, M.2    Rahmouni, R.3    Leng, M.4    Bossi, L.5
  • 41
    • 0031576351 scopus 로고    scopus 로고
    • Role of DNA supercoiling and RpoS sigma factor in the osmotic and growth phase-dependent induction of the gene osmE of Escherichia coli k12
    • Conter A, Menchon C, Gutierrez C: Role of DNA supercoiling and RpoS sigma factor in the osmotic and growth phase-dependent induction of the gene osmE of Escherichia coli k12. J Mol Biol 1997, 273:75-83.
    • (1997) J Mol Biol , vol.273 , pp. 75-83
    • Conter, A.1    Menchon, C.2    Gutierrez, C.3
  • 43
    • 0029992419 scopus 로고    scopus 로고
    • From acids to OsmZ-multiple factors influence the synthesis of the OmpF and OmpC porins in Escherichia coli
    • Pratt LA, Hsing WH, Gibson KE, Silhavy TJ: From acids to OsmZ-multiple factors influence the synthesis of the OmpF and OmpC porins in Escherichia coli. Mol Microbiol 1996, 20:911-917.
    • (1996) Mol Microbiol , vol.20 , pp. 911-917
    • Pratt, L.A.1    Hsing, W.H.2    Gibson, K.E.3    Silhavy, T.J.4
  • 44
    • 0031446430 scopus 로고    scopus 로고
    • Mutation for survival
    • Rosenberg SM: Mutation for survival. Curr Opin Genet Dev 1997, 7:829-834. Results with plate mutation selections raise parallel questions relevant to this review, namely whether nutrient-limited bacteria also change regulation of their mutational capabilities.
    • (1997) Curr Opin Genet Dev , vol.7 , pp. 829-834
    • Rosenberg, S.M.1
  • 45
    • 0033068938 scopus 로고    scopus 로고
    • Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited E. coli populations
    • Notley-Mcrobb L, Ferenci T: Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited E. coli populations. Env Microbiol 1999, 1:33-44.
    • (1999) Env Microbiol , vol.1 , pp. 33-44
    • Notley-Mcrobb, L.1    Ferenci, T.2
  • 46
    • 0033068946 scopus 로고    scopus 로고
    • The generation of multiple coexisting mal-regulatory mutations through polygenic evolution in glucose-limited populations of E. coli
    • Notley-Mcrobb L, Ferenci T: The generation of multiple coexisting mal-regulatory mutations through polygenic evolution in glucose-limited populations of E. coli. Env Microbiol 1999, 1:45-52.
    • (1999) Env Microbiol , vol.1 , pp. 45-52
    • Notley-Mcrobb, L.1    Ferenci, T.2
  • 47
    • 0028116314 scopus 로고
    • The growth of Escherichia coli in glucose-limited chemostat cultures: A reexamination of the kinetics
    • Senn H, Lendenmann U, Snozzi M Hamer G, Egli T: The growth of Escherichia coli in glucose-limited chemostat cultures: A reexamination of the kinetics. Biochim Biophys Acta 1994, 1201:424-436.
    • (1994) Biochim Biophys Acta , vol.1201 , pp. 424-436
    • Senn, H.1    Lendenmann, U.2    Snozzi, M.3    Hamer, G.4    Egli, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.