메뉴 건너뛰기




Volumn 42, Issue 4, 2007, Pages 271-283

Adaptive amplification

Author keywords

Adaptation; Duplication; Gene amplification; Stress response

Indexed keywords

AMPLICON; ASSAY; BACTERIUM; CELL STRESS; ESCHERICHIA COLI; EVOLUTION; GENE AMPLIFICATION; GENE DUPLICATION; GENE EXPRESSION; GENOME; GENOMICS; HOMOLOGOUS RECOMBINATION; NONHUMAN; PRIORITY JOURNAL; REVIEW;

EID: 34547754092     PISSN: 10409238     EISSN: 15497798     Source Type: Journal    
DOI: 10.1080/10409230701507757     Document Type: Review
Times cited : (55)

References (95)
  • 2
    • 33746255899 scopus 로고    scopus 로고
    • Gene amplification in cancer
    • Albertson, D.G. 2006. Gene amplification in cancer. Trends in Genetics 22:447-455.
    • (2006) Trends in Genetics , vol.22 , pp. 447-455
    • Albertson, D.G.1
  • 3
    • 0017333825 scopus 로고
    • Tandem genetic duplications in phage and bacteria
    • Anderson, R.P. and Roth, J.R. 1977. Tandem genetic duplications in phage and bacteria. Annu Rev Microbiol 31:473-505.
    • (1977) Annu Rev Microbiol , vol.31 , pp. 473-505
    • Anderson, R.P.1    Roth, J.R.2
  • 4
    • 33645781346 scopus 로고    scopus 로고
    • Making ends meet: Repairing breaks in bacterial DNA by non-homologous end-joining
    • Bowater, R. and Doherty, A.J. 2006. Making ends meet: repairing breaks in bacterial DNA by non-homologous end-joining. PLoS Genet 2:e8.
    • (2006) PLoS Genet , vol.2
    • Bowater, R.1    Doherty, A.J.2
  • 5
    • 33747889722 scopus 로고    scopus 로고
    • Role of non-homologous end joining (NHEJ) in maintaining genomic integrity
    • Burma, S., Chen, B.P., and Chen, D.J. 2006. Role of non-homologous end joining (NHEJ) in maintaining genomic integrity. DNA Repair (Amst) 5:1042-1048.
    • (2006) DNA Repair (Amst) , vol.5 , pp. 1042-1048
    • Burma, S.1    Chen, B.P.2    Chen, D.J.3
  • 6
    • 0030582735 scopus 로고    scopus 로고
    • Induction of large DNA palindrome formation in yeast: Implications for gene amplification and genome stability in eukaryotes
    • Butler, D.K., Yasuda, L.E., and Yao, M.C. 1996. Induction of large DNA palindrome formation in yeast: implications for gene amplification and genome stability in eukaryotes. Cell 87:1115-1122.
    • (1996) Cell , vol.87 , pp. 1115-1122
    • Butler, D.K.1    Yasuda, L.E.2    Yao, M.C.3
  • 7
    • 0035902443 scopus 로고    scopus 로고
    • Instability of repetitive DNA sequences: The role of replication in multiple mechanisms
    • Bzymek, M. and Lovett, S.T. 2001. Instability of repetitive DNA sequences: the role of replication in multiple mechanisms. Proc Natl Acad Sci USA 98:8319-8325.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 8319-8325
    • Bzymek, M.1    Lovett, S.T.2
  • 8
    • 0026094779 scopus 로고
    • Adaptive reversion of a frameshift mutation in Escherichia coli
    • Cairns, J. and Foster, P.L. 1991. Adaptive reversion of a frameshift mutation in Escherichia coli. Genetics 128:695-701.
    • (1991) Genetics , vol.128 , pp. 695-701
    • Cairns, J.1    Foster, P.L.2
  • 9
    • 0032861509 scopus 로고    scopus 로고
    • Chorion gene amplification in Drosophila: A model for metazoan origins of DNA replication and S-phase control
    • Calvi, B.R. and Spradling, A.C. 1999. Chorion gene amplification in Drosophila: A model for metazoan origins of DNA replication and S-phase control. Methods 18:407-417.
    • (1999) Methods , vol.18 , pp. 407-417
    • Calvi, B.R.1    Spradling, A.C.2
  • 10
    • 3042830460 scopus 로고    scopus 로고
    • Gene amplification and cold adaptation of pepsin in Antarctic fish. A possible strategy for food digestion at low temperature
    • Carginale, V., Trinchella, F., Capasso, C., Scudiero, R., and Parisi, E. 2004. Gene amplification and cold adaptation of pepsin in Antarctic fish. A possible strategy for food digestion at low temperature. Gene 336:195-205.
    • (2004) Gene , vol.336 , pp. 195-205
    • Carginale, V.1    Trinchella, F.2    Capasso, C.3    Scudiero, R.4    Parisi, E.5
  • 11
    • 0020392841 scopus 로고
    • Double minutes and homogenously staining regions: Gene amplification in mammalian cells
    • Cowell, J.K. 1982. Double minutes and homogenously staining regions: gene amplification in mammalian cells. Annu Rev Genet 16:21-59.
    • (1982) Annu Rev Genet , vol.16 , pp. 21-59
    • Cowell, J.K.1
  • 14
    • 0019723857 scopus 로고
    • Recombination between short DNA homologies causes tandem duplication
    • Edlund, T. and Normark, S. 1981. Recombination between short DNA homologies causes tandem duplication. Nature 292:269-271.
    • (1981) Nature , vol.292 , pp. 269-271
    • Edlund, T.1    Normark, S.2
  • 15
    • 31144469134 scopus 로고    scopus 로고
    • Feuk, L., Carson, A.R., and W., S.S. 2006. Structural variation in the human genome. Nat Rev Genetics 7:85-97.
    • Feuk, L., Carson, A.R., and W., S.S. 2006. Structural variation in the human genome. Nat Rev Genetics 7:85-97.
  • 16
    • 0343299702 scopus 로고
    • Tandem gene amplification mediates copper resistance in yeast
    • Fogel, S. and Welch, J.W. 1982. Tandem gene amplification mediates copper resistance in yeast. Proc Natl Acad Sci USA 79:5342-5346.
    • (1982) Proc Natl Acad Sci USA , vol.79 , pp. 5342-5346
    • Fogel, S.1    Welch, J.W.2
  • 17
    • 0028169997 scopus 로고
    • - strain of Escherichia coli during selection for lactose utilization
    • - strain of Escherichia coli during selection for lactose utilization. Genetics 138:253-261.
    • (1994) Genetics , vol.138 , pp. 253-261
    • Foster, P.L.1
  • 18
    • 0030051842 scopus 로고    scopus 로고
    • Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli
    • Foster, P.L., Trimarchi, J.M., and Maurer, R.A. 1996. Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli. Genetics 142:25-37.
    • (1996) Genetics , vol.142 , pp. 25-37
    • Foster, P.L.1    Trimarchi, J.M.2    Maurer, R.A.3
  • 19
    • 20044369186 scopus 로고    scopus 로고
    • An adaptive radiation model for the origin of new gene functions
    • Francino, M.P. 2005. An adaptive radiation model for the origin of new gene functions. Nat Genet 37:573-577.
    • (2005) Nat Genet , vol.37 , pp. 573-577
    • Francino, M.P.1
  • 20
    • 0030794124 scopus 로고    scopus 로고
    • Pathways for homologous recombination between direct repeats in Salmonella typhimurium
    • Galitski, T. and Roth, J.R. 1997. Pathways for homologous recombination between direct repeats in Salmonella typhimurium. Genetics 146:751-767.
    • (1997) Genetics , vol.146 , pp. 751-767
    • Galitski, T.1    Roth, J.R.2
  • 21
    • 33645563615 scopus 로고    scopus 로고
    • Gene amplification of the Hps locus in Glycine max
    • Gijzen, M., Kuflu, K., and Moy, P. 2006. Gene amplification of the Hps locus in Glycine max. BMC Plant Biol 6:6.
    • (2006) BMC Plant Biol , vol.6 , pp. 6
    • Gijzen, M.1    Kuflu, K.2    Moy, P.3
  • 22
    • 0033985128 scopus 로고    scopus 로고
    • Some features of the mutability of bacteria during nonlethal selection
    • Godoy, V.G., Gizatullin, F.S., and Fox, M.S. 2000. Some features of the mutability of bacteria during nonlethal selection. Genetics 154:49-59.
    • (2000) Genetics , vol.154 , pp. 49-59
    • Godoy, V.G.1    Gizatullin, F.S.2    Fox, M.S.3
  • 23
    • 0029035295 scopus 로고
    • Tandem genes and clustered genes
    • Graham, G.J. 1995. Tandem genes and clustered genes. J Theor Biol 175:71-87.
    • (1995) J Theor Biol , vol.175 , pp. 71-87
    • Graham, G.J.1
  • 25
    • 33745438417 scopus 로고    scopus 로고
    • Gene amplification: Yeast takes a turn
    • Haber, J.E. and Debatisse, M. 2006. Gene amplification: yeast takes a turn. Cell 125:1237-1240.
    • (2006) Cell , vol.125 , pp. 1237-1240
    • Haber, J.E.1    Debatisse, M.2
  • 26
  • 27
    • 0030000945 scopus 로고    scopus 로고
    • Opposing roles of the Holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutation
    • Harris, R.S., Ross, K.J., and Rosenberg, S.M. 1996. Opposing roles of the Holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutation. Genetics 142:681-691.
    • (1996) Genetics , vol.142 , pp. 681-691
    • Harris, R.S.1    Ross, K.J.2    Rosenberg, S.M.3
  • 28
    • 0034703711 scopus 로고    scopus 로고
    • Adaptive amplification: An inducible chromosomal instability mechanism
    • Hastings, P.J., Bull, H.J., Klump, J.R., and Rosenberg, S.M. 2000. Adaptive amplification: an inducible chromosomal instability mechanism. Cell 103:723-731.
    • (2000) Cell , vol.103 , pp. 723-731
    • Hastings, P.J.1    Bull, H.J.2    Klump, J.R.3    Rosenberg, S.M.4
  • 29
    • 4444356917 scopus 로고    scopus 로고
    • Antibiotic-induced lateral transfer of antibiotic resistance
    • Hastings, P.J., Rosenberg, S.M., and Slack, A. 2004a. Antibiotic-induced lateral transfer of antibiotic resistance. Trends Microbiol 12:401-404.
    • (2004) Trends Microbiol , vol.12 , pp. 401-404
    • Hastings, P.J.1    Rosenberg, S.M.2    Slack, A.3
  • 30
    • 14044252089 scopus 로고    scopus 로고
    • Adaptive amplification and point mutation are independent mechanisms: Evidence for various stress-inducible mutation mechanisms
    • Hastings, P.J., Slack, A., Petrosino, J.F., and Rosenberg, S.M. 2004b. Adaptive amplification and point mutation are independent mechanisms: Evidence for various stress-inducible mutation mechanisms. PLoS Biol 2:e399.
    • (2004) PLoS Biol , vol.2
    • Hastings, P.J.1    Slack, A.2    Petrosino, J.F.3    Rosenberg, S.M.4
  • 31
    • 0037133168 scopus 로고    scopus 로고
    • Amplification-mutagenesis: Evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplification
    • Hendrickson, H., Slechta, E.S., Bergthorsson, U., Andersson, D.I., and Roth, J.R. 2002. Amplification-mutagenesis: evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplification. Proc Natl Acad Sci USA 99:2164-2169.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 2164-2169
    • Hendrickson, H.1    Slechta, E.S.2    Bergthorsson, U.3    Andersson, D.I.4    Roth, J.R.5
  • 32
    • 0000291637 scopus 로고    scopus 로고
    • The general stress response in Escherichia coli
    • Stortz, G, Hengge-Aronis, R, editors, D.C, Washington: ASM Press
    • Hengge-Aronis, R. 2000. The general stress response in Escherichia coli. In: Stortz, G., Hengge-Aronis, R., editors. The general stress response in Escherichia coli. D.C., Washington: ASM Press.
    • (2000) The general stress response in Escherichia coli
    • Hengge-Aronis, R.1
  • 33
    • 0036714331 scopus 로고    scopus 로고
    • Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
    • Hengge-Aronis, R. 2002. Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol Mol Biol Rev 66:373-395.
    • (2002) Microbiol Mol Biol Rev , vol.66 , pp. 373-395
    • Hengge-Aronis, R.1
  • 34
    • 0042387792 scopus 로고    scopus 로고
    • Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster
    • Hollox, E.J., Armour, J.A., and Barber, J.C. 2003. Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster. Am J Hum Genet 73:591-600.
    • (2003) Am J Hum Genet , vol.73 , pp. 591-600
    • Hollox, E.J.1    Armour, J.A.2    Barber, J.C.3
  • 35
    • 0028927493 scopus 로고
    • Amplification of a circular episome carrying an inverted repeat of the DFR1 locus and adjacent autonomously replicating sequence element of Saccharomyces cerevisiae
    • Huang, T. and Campbell, J.L. 1995. Amplification of a circular episome carrying an inverted repeat of the DFR1 locus and adjacent autonomously replicating sequence element of Saccharomyces cerevisiae. J Biol Chem 270:9607-9614.
    • (1995) J Biol Chem , vol.270 , pp. 9607-9614
    • Huang, T.1    Campbell, J.L.2
  • 36
    • 19044366773 scopus 로고    scopus 로고
    • Genomic rearrangements resulting in PLP1 deletion occur by nonhomologous end joining and cause different dysmyelinating phenotypes in males and females
    • Inoue, K., Osaka, H., Thurston, V.C., Clarke, J.T., Yoneyama, A., Rosenbarker, L., Bird, T.D., Hodes, M.E., Shaffer, L.G., and Lupski, J.R. 2002. Genomic rearrangements resulting in PLP1 deletion occur by nonhomologous end joining and cause different dysmyelinating phenotypes in males and females. Am J Hum Genet 71:838-853.
    • (2002) Am J Hum Genet , vol.71 , pp. 838-853
    • Inoue, K.1    Osaka, H.2    Thurston, V.C.3    Clarke, J.T.4    Yoneyama, A.5    Rosenbarker, L.6    Bird, T.D.7    Hodes, M.E.8    Shaffer, L.G.9    Lupski, J.R.10
  • 37
    • 0030737725 scopus 로고    scopus 로고
    • Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription
    • Kogoma, T. 1997. Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription. Microbiol Mol Biol Rev 61:212-238.
    • (1997) Microbiol Mol Biol Rev , vol.61 , pp. 212-238
    • Kogoma, T.1
  • 38
    • 0037974538 scopus 로고    scopus 로고
    • Dynamics of genetic instability in sporadic and familial colorectal cancer
    • Komarova, N.L., Lengauer, C., Vogelstein, B., and Nowak, M.A. 2002. Dynamics of genetic instability in sporadic and familial colorectal cancer. Cancer Biol Ther 1:685-692.
    • (2002) Cancer Biol Ther , vol.1 , pp. 685-692
    • Komarova, N.L.1    Lengauer, C.2    Vogelstein, B.3    Nowak, M.A.4
  • 40
    • 6044228192 scopus 로고    scopus 로고
    • SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: Function of sigmaS-dependent genes and identification of their promoter sequences
    • Lacour, S. and Landini, P. 2004. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. J Bacteriol 186:7186-7195.
    • (2004) J Bacteriol , vol.186 , pp. 7186-7195
    • Lacour, S.1    Landini, P.2
  • 41
    • 0142062024 scopus 로고    scopus 로고
    • Layton, J.C. and Foster, P.L. 2003. Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol Microbiol 50:549-561.
    • Layton, J.C. and Foster, P.L. 2003. Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol Microbiol 50:549-561.
  • 43
    • 0018926081 scopus 로고
    • Involvement of ribosomal ribonucleic acid operons in Salmonella typhimurium chromosomal rearrangements
    • Lehner, A.F. and Hill, C.W. 1980. Involvement of ribosomal ribonucleic acid operons in Salmonella typhimurium chromosomal rearrangements. J Bacteriol 143:492-498.
    • (1980) J Bacteriol , vol.143 , pp. 492-498
    • Lehner, A.F.1    Hill, C.W.2
  • 44
    • 0032542364 scopus 로고    scopus 로고
    • Genetic instabilities in human cancers
    • Lengauer, C., Kinzler, K.W., and Vogelstein, B. 1998. Genetic instabilities in human cancers. Nature 396:643-649.
    • (1998) Nature , vol.396 , pp. 643-649
    • Lengauer, C.1    Kinzler, K.W.2    Vogelstein, B.3
  • 45
    • 0021613767 scopus 로고
    • A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome
    • Lin, R.J., Capage, M., and Hill, C.W. 1984. A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome. J Mol Biol 177:1-18.
    • (1984) J Mol Biol , vol.177 , pp. 1-18
    • Lin, R.J.1    Capage, M.2    Hill, C.W.3
  • 46
    • 1642354817 scopus 로고    scopus 로고
    • General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli
    • Lombardo, M.-J., Aponyi, I., and Rosenberg, S.M. 2004. General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli. Genetics 166:669-680.
    • (2004) Genetics , vol.166 , pp. 669-680
    • Lombardo, M.-J.1    Aponyi, I.2    Rosenberg, S.M.3
  • 47
    • 0027420692 scopus 로고
    • A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli
    • Lovett, S.T., Drapkin, P.T., Sutera, Jr., V.A., and Gluckman-Peskind, T.J. 1993. A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli. Genetics 135:631-642.
    • (1993) Genetics , vol.135 , pp. 631-642
    • Lovett, S.T.1    Drapkin, P.T.2    Sutera Jr., V.A.3    Gluckman-Peskind, T.J.4
  • 48
    • 0028088757 scopus 로고
    • Recombination between repeats in Escherichia coli by a recA-independent, proximity-sensitive mechanism
    • Lovett, S.T., Gluckman, T.J., Simon, P.J., Sutera, Jr., V.A., and Drapkin, P.T. 1994. Recombination between repeats in Escherichia coli by a recA-independent, proximity-sensitive mechanism. Mol Gen Genet 254:294-300.
    • (1994) Mol Gen Genet , vol.254 , pp. 294-300
    • Lovett, S.T.1    Gluckman, T.J.2    Simon, P.J.3    Sutera Jr., V.A.4    Drapkin, P.T.5
  • 49
    • 34547664096 scopus 로고    scopus 로고
    • Genomic disorders: Molecular mechanisms for rearrangements and conveyed phenotypes
    • Lupski, J.R. and Stankiewicz, P. 2005. Genomic disorders: molecular mechanisms for rearrangements and conveyed phenotypes. PLoS Genet 1:e49.
    • (2005) PLoS Genet , vol.1
    • Lupski, J.R.1    Stankiewicz, P.2
  • 50
    • 0024477507 scopus 로고
    • Role of recBC function in formation of chromosomal rearrangements: A two-step model for recombination
    • Mahan, M. and Roth, J.R. 1989. Role of recBC function in formation of chromosomal rearrangements: A two-step model for recombination. Genetics 121:433-443.
    • (1989) Genetics , vol.121 , pp. 433-443
    • Mahan, M.1    Roth, J.R.2
  • 51
    • 0030426021 scopus 로고    scopus 로고
    • Mechanisms of primer RNA synthesis and D-loop/R-loop-dependent DNA replication in Escherichia coli
    • Masai, H. and Arai, K. 1996. Mechanisms of primer RNA synthesis and D-loop/R-loop-dependent DNA replication in Escherichia coli. Biochimie 78:1109-1117.
    • (1996) Biochimie , vol.78 , pp. 1109-1117
    • Masai, H.1    Arai, K.2
  • 52
    • 0021800898 scopus 로고
    • Rec-dependent and Rec-independent recombination of plasmid-borne duplications in Escherichia coli K12
    • Matfield, M., Badawi, R., and Brammar, W.J. 1985. Rec-dependent and Rec-independent recombination of plasmid-borne duplications in Escherichia coli K12. Mol Gen Genet 199:518-523.
    • (1985) Mol Gen Genet , vol.199 , pp. 518-523
    • Matfield, M.1    Badawi, R.2    Brammar, W.J.3
  • 53
    • 0025816222 scopus 로고
    • Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats
    • Mazin, A.V., Kuzminov, A.V., Dianov, G.L., and Salganik, R.I. 1991. Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats. Mol Gen Genet 228:209-214.
    • (1991) Mol Gen Genet , vol.228 , pp. 209-214
    • Mazin, A.V.1    Kuzminov, A.V.2    Dianov, G.L.3    Salganik, R.I.4
  • 54
    • 0000980730 scopus 로고
    • The fusion of broken ends of chromosomes following nuclear fusion
    • McClintock, B. 1942. The fusion of broken ends of chromosomes following nuclear fusion. Proc Natl Acad Sci USA 28:458-463.
    • (1942) Proc Natl Acad Sci USA , vol.28 , pp. 458-463
    • McClintock, B.1
  • 55
    • 0031746001 scopus 로고    scopus 로고
    • Recombination-dependent mutation in Escherichia coli occurs in stationary phase
    • McKenzie, G.J., Lombardo, M.-J., and Rosenberg, S.M. 1998. Recombination-dependent mutation in Escherichia coli occurs in stationary phase. Genetics 149:1563-1565.
    • (1998) Genetics , vol.149 , pp. 1563-1565
    • McKenzie, G.J.1    Lombardo, M.-J.2    Rosenberg, S.M.3
  • 56
    • 1942488150 scopus 로고    scopus 로고
    • RecG helicase promotes DNA double-strand break repair
    • Meddows, T.R., Savory, A.P., and Lloyd, R.G. 2004. RecG helicase promotes DNA double-strand break repair. Mol Microbiol 52:119-132.
    • (2004) Mol Microbiol , vol.52 , pp. 119-132
    • Meddows, T.R.1    Savory, A.P.2    Lloyd, R.G.3
  • 57
    • 0021033756 scopus 로고
    • Duplication and amplification of toxin genes in Vibrio cholerae
    • Mekalanos, J.J. 1983. Duplication and amplification of toxin genes in Vibrio cholerae. Cell 35:353-363.
    • (1983) Cell , vol.35 , pp. 353-363
    • Mekalanos, J.J.1
  • 58
    • 20544469464 scopus 로고    scopus 로고
    • Chromosomal instability and human cancer
    • Michor, F. 2005. Chromosomal instability and human cancer. Philos Trans R Soc Lond B Biol Sci 360:631-635.
    • (2005) Philos Trans R Soc Lond B Biol Sci , vol.360 , pp. 631-635
    • Michor, F.1
  • 59
    • 0034082435 scopus 로고    scopus 로고
    • Bacterial endosymbionts in animals
    • Moran, N.A. and Baumann, P. 2000. Bacterial endosymbionts in animals. Curr Opin Microbiol 3:270-275.
    • (2000) Curr Opin Microbiol , vol.3 , pp. 270-275
    • Moran, N.A.1    Baumann, P.2
  • 60
    • 33745264366 scopus 로고    scopus 로고
    • The pattern of gene amplification is determined by the chromosomal location of hairpin-capped breaks
    • Narayanan, V., Mieczkowski, P.A., Kim, H.M., Petes, T.D., and Lobachev, K.S. 2006. The pattern of gene amplification is determined by the chromosomal location of hairpin-capped breaks. Cell 125:1283-1296.
    • (2006) Cell , vol.125 , pp. 1283-1296
    • Narayanan, V.1    Mieczkowski, P.A.2    Kim, H.M.3    Petes, T.D.4    Lobachev, K.S.5
  • 62
    • 0026133208 scopus 로고
    • Drosophila chorion genes: Cracking the eggshell's secrets
    • Orr-Weaver, T.L. 1991. Drosophila chorion genes: cracking the eggshell's secrets. Bioessays 13:97-105.
    • (1991) Bioessays , vol.13 , pp. 97-105
    • Orr-Weaver, T.L.1
  • 63
    • 1842636876 scopus 로고    scopus 로고
    • Protection against zinc toxicity by metallothionein and zinc transporter 1
    • Palmiter, R.D. 2004. Protection against zinc toxicity by metallothionein and zinc transporter 1. Proc Natl Acad Sci USA 101:4918-4923.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 4918-4923
    • Palmiter, R.D.1
  • 64
    • 34249789279 scopus 로고    scopus 로고
    • Spontaneous DNA breakage in single living cells of Escherichia coli
    • Pennington, J.M. and Rosenberg, S.M. 2007. Spontaneous DNA breakage in single living cells of Escherichia coli. Nature Genetics 39:792-802.
    • (2007) Nature Genetics , vol.39 , pp. 792-802
    • Pennington, J.M.1    Rosenberg, S.M.2
  • 65
    • 0017737037 scopus 로고
    • Selective amplification of genes on the R plasmid, NR1, in Proteusmirabilis: An example of the induction of selective gene amplification
    • Perlman, D. and Stickgold, R. 1977. Selective amplification of genes on the R plasmid, NR1, in Proteusmirabilis: an example of the induction of selective gene amplification. Proc Natl Acad Sci USA 74:2518-2522.
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 2518-2522
    • Perlman, D.1    Stickgold, R.2
  • 66
    • 0026557514 scopus 로고
    • Induction of DNA amplification in the Bacillus subtilis chromosome
    • Petit, M.-A., Mesas, J.M., Morel-Deville, F., and Ehrlich, S.D. 1992. Induction of DNA amplification in the Bacillus subtilis chromosome. EMBO J 11:1317-1326.
    • (1992) EMBO J , vol.11 , pp. 1317-1326
    • Petit, M.-A.1    Mesas, J.M.2    Morel-Deville, F.3    Ehrlich, S.D.4
  • 67
    • 0032472367 scopus 로고    scopus 로고
    • Interstitial deletions and intrachromosomal amplification initiated from a double-strand break targeted to amammalian chromosome
    • Pipiras, E., Coquelle, A., Bieth, A., and Debatisse, M. 1998. Interstitial deletions and intrachromosomal amplification initiated from a double-strand break targeted to amammalian chromosome. EMBO J 17:325-333.
    • (1998) EMBO J , vol.17 , pp. 325-333
    • Pipiras, E.1    Coquelle, A.2    Bieth, A.3    Debatisse, M.4
  • 68
    • 24944477416 scopus 로고    scopus 로고
    • A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation
    • Ponder, R.G., Fonville, N.C., and Rosenberg, S.M. 2005. A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation. Mol Cell 19:791-804.
    • (2005) Mol Cell , vol.19 , pp. 791-804
    • Ponder, R.G.1    Fonville, N.C.2    Rosenberg, S.M.3
  • 69
    • 0035916419 scopus 로고    scopus 로고
    • Different characteristics distinguish early versus late arising adaptive mutations in Escherichia coli FC40
    • Powell, S.C. and Wartell, R.M. 2001. Different characteristics distinguish early versus late arising adaptive mutations in Escherichia coli FC40. Mutat Res 473:219-228.
    • (2001) Mutat Res , vol.473 , pp. 219-228
    • Powell, S.C.1    Wartell, R.M.2
  • 70
  • 71
    • 0035706526 scopus 로고    scopus 로고
    • Insecticide resistance in the mosquito culex pipiens: What have we learned about adaptation?
    • Raymond, M., Berticat, C., Weill, M., Pasteur, N., and Chevillon, C. 2001. Insecticide resistance in the mosquito culex pipiens: what have we learned about adaptation?. Genetica 112-113:287-296.
    • (2001) Genetica , vol.112-113 , pp. 287-296
    • Raymond, M.1    Berticat, C.2    Weill, M.3    Pasteur, N.4    Chevillon, C.5
  • 73
    • 1942457367 scopus 로고    scopus 로고
    • Gene amplification involves site-specific short homology-independent illegitimate recombination in Acinetobacter sp. strain ADP1
    • Reams, A.B. and Neidle, E.L. 2004a. Gene amplification involves site-specific short homology-independent illegitimate recombination in Acinetobacter sp. strain ADP1. J Mol Biol 338:643-656.
    • (2004) J Mol Biol , vol.338 , pp. 643-656
    • Reams, A.B.1    Neidle, E.L.2
  • 74
    • 1942498070 scopus 로고    scopus 로고
    • Selection for gene clustering by tandem duplication
    • Reams, A.B. and Neidle, E.L. 2004b. Selection for gene clustering by tandem duplication. Annu Rev Microbiol 58:119-142.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 119-142
    • Reams, A.B.1    Neidle, E.L.2
  • 75
    • 0035895278 scopus 로고    scopus 로고
    • Genetic architecture of thermal adaptation in Escherichia coli
    • Riehle, M.M., Bennett, A.F., and Long, A.D. 2001. Genetic architecture of thermal adaptation in Escherichia coli. Proc Natl Acad Sci USA 98:525-530.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 525-530
    • Riehle, M.M.1    Bennett, A.F.2    Long, A.D.3
  • 76
    • 0031468083 scopus 로고    scopus 로고
    • Gene amplification and genomic plasticity in prokaryotes
    • Romero, D. and Palacios, R. 1997. Gene amplification and genomic plasticity in prokaryotes. Annu Rev Genet 31:91-111.
    • (1997) Annu Rev Genet , vol.31 , pp. 91-111
    • Romero, D.1    Palacios, R.2
  • 77
    • 0033536052 scopus 로고    scopus 로고
    • The role of transient hypermutators in adaptive mutation in Escherichia coli
    • Rosche, W.A. and Foster, P.L. 1999. The role of transient hypermutators in adaptive mutation in Escherichia coli. Proc Natl Acad Sci USA 96:6862-6867.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 6862-6867
    • Rosche, W.A.1    Foster, P.L.2
  • 78
    • 34547772902 scopus 로고    scopus 로고
    • Roth, J.R., Benson, N., Galitski, T., Haack, K., Lawrence, J.G., and Meisel, L. 1996. Rearrangements of the bacterial chromosome: formation and applications. In: Neidhardt, F.C., Curtiss, R., Ingraham, J.L., Lin, ECC., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., Umbarger, H.E., editors. Escherichia coli and Salmonella cellular and molecular biology. D.C., Washington: ASM Press, 2256-2276.
    • Roth, J.R., Benson, N., Galitski, T., Haack, K., Lawrence, J.G., and Meisel, L. 1996. Rearrangements of the bacterial chromosome: formation and applications. In: Neidhardt, F.C., Curtiss, R., Ingraham, J.L., Lin, ECC., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., Umbarger, H.E., editors. Escherichia coli and Salmonella cellular and molecular biology. D.C., Washington: ASM Press, 2256-2276.
  • 80
    • 0028010718 scopus 로고
    • Approaches to half-tetrad analysis in bacteria: Recombination between repeated, inverse-order chromosomal sequences
    • Segall, A.M. and Roth, J.R. 1994. Approaches to half-tetrad analysis in bacteria: recombination between repeated, inverse-order chromosomal sequences. Genetics 136:27-39.
    • (1994) Genetics , vol.136 , pp. 27-39
    • Segall, A.M.1    Roth, J.R.2
  • 82
    • 0025020281 scopus 로고
    • Tandem chromosomal duplications: Role of REP sequences in the recombination event at the join-point
    • Shyamala, V., Schneider, E., and Ames, G.F. 1990. Tandem chromosomal duplications: role of REP sequences in the recombination event at the join-point. EMBO J 9:939-946.
    • (1990) EMBO J , vol.9 , pp. 939-946
    • Shyamala, V.1    Schneider, E.2    Ames, G.F.3
  • 83
    • 33646490411 scopus 로고    scopus 로고
    • Slack, A., Thornton, P.C., Magner, D.B., Rosenberg, S.M., and Hastings, P.J. 2006. On the mechanism of gene amplification induced under stress in Escherichia coli. PLoS Genetics 2:e48.
    • Slack, A., Thornton, P.C., Magner, D.B., Rosenberg, S.M., and Hastings, P.J. 2006. On the mechanism of gene amplification induced under stress in Escherichia coli. PLoS Genetics 2:e48.
  • 84
    • 0024438949 scopus 로고
    • Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources
    • Sonti, R.V. and Roth, J.R. 1989. Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources. Genetics 123:19-28.
    • (1989) Genetics , vol.123 , pp. 19-28
    • Sonti, R.V.1    Roth, J.R.2
  • 85
    • 0010521212 scopus 로고
    • Amplification of genes for chorion proteins during oogenesis in Drosophila melanogaster
    • Spradling, A.C. and Mahowald, A.P. 1980. Amplification of genes for chorion proteins during oogenesis in Drosophila melanogaster. Proc Natl Acad Sci USA 77:1096-1100.
    • (1980) Proc Natl Acad Sci USA , vol.77 , pp. 1096-1100
    • Spradling, A.C.1    Mahowald, A.P.2
  • 87
    • 0021153579 scopus 로고
    • Gene amplification in the lac region of E. coli
    • Tlsty, T.D., Albertini, A.M., and Miller, J.H. 1984. Gene amplification in the lac region of E. coli. Cell 37:217-224.
    • (1984) Cell , vol.37 , pp. 217-224
    • Tlsty, T.D.1    Albertini, A.M.2    Miller, J.H.3
  • 88
    • 0024357990 scopus 로고
    • Differences in the rates of gene amplification in nontumorigenic and tumorigenic cell lines as measured by Luria-Delbrück fluctuation analysis
    • Tlsty, T.D., Margolin, B.H., and Lum, K. 1989. Differences in the rates of gene amplification in nontumorigenic and tumorigenic cell lines as measured by Luria-Delbrück fluctuation analysis. Proc Natl Acad Sci USA 86:9441-9445.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 9441-9445
    • Tlsty, T.D.1    Margolin, B.H.2    Lum, K.3
  • 89
    • 0030924613 scopus 로고    scopus 로고
    • Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation
    • Torkelson, J., Harris, R.S., Lombardo, M.-J., Nagendran, J., Thulin, C., and Rosenberg, S.M. 1997. Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation. EMBO J 16:3303-3311.
    • (1997) EMBO J , vol.16 , pp. 3303-3311
    • Torkelson, J.1    Harris, R.S.2    Lombardo, M.-J.3    Nagendran, J.4    Thulin, C.5    Rosenberg, S.M.6
  • 90
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity
    • Weber, H., Polen, T., Heuveling, J., Wendisch, V.F., and Hengge, R. 2005. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187:1591-1603.
    • (2005) J Bacteriol , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 91
    • 0023334462 scopus 로고
    • Genetic rearrangement and gene amplification in Escherichia coli: DNA sequences at the junctures of amplified gene fusions
    • Whoriskey, S.K., Nghiem, V.-H., Leong, P.-M., Masson, J.-M., and Miller, J.H. 1987. Genetic rearrangement and gene amplification in Escherichia coli: DNA sequences at the junctures of amplified gene fusions. Genes Dev 1:227-237.
    • (1987) Genes Dev , vol.1 , pp. 227-237
    • Whoriskey, S.K.1    Nghiem, V.-H.2    Leong, P.-M.3    Masson, J.-M.4    Miller, J.H.5
  • 92
  • 93
    • 0023660544 scopus 로고
    • Gene amplification mechanism for the hyperproduction of T4 bacteriophage gene 17 and 18 proteins
    • Wu, D.G. and Black, L.W. 1987. Gene amplification mechanism for the hyperproduction of T4 bacteriophage gene 17 and 18 proteins. J Mol Biol 195:769-783.
    • (1987) J Mol Biol , vol.195 , pp. 769-783
    • Wu, D.G.1    Black, L.W.2
  • 94
    • 0023149088 scopus 로고
    • A plausible mechanism for large-scale chromosomal DNA amplification in streptomycetes
    • Young, M. and Cullum, J. 1987. A plausible mechanism for large-scale chromosomal DNA amplification in streptomycetes. FEBS Lett 212:10-14.
    • (1987) FEBS Lett , vol.212 , pp. 10-14
    • Young, M.1    Cullum, J.2
  • 95
    • 0024971668 scopus 로고
    • Dihydrofolate reductase of the extremely halophilic archaebacterium Halobacterium volcanii. The enzyme and its coding gene
    • Zusman, T., Rosenshine, I., Boehm, G., Jaenicke, R., Leskiw, B., and Mevarech, M. 1989. Dihydrofolate reductase of the extremely halophilic archaebacterium Halobacterium volcanii. The enzyme and its coding gene. J Biol Chem 264:18878-18883.
    • (1989) J Biol Chem , vol.264 , pp. 18878-18883
    • Zusman, T.1    Rosenshine, I.2    Boehm, G.3    Jaenicke, R.4    Leskiw, B.5    Mevarech, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.