Stress and survival of aging Escherichia coli rpoS colonies

Genetics

Volumn 168, Issue 1, 2004, Pages 541-546

  Saint Ruf, Claude ^a   Taddei, François ^a   Matic, Ivan ^a  

^a INSERM   (France)

Author keywords

[No Author keywords available]

Indexed keywords

RHO FACTOR;

AGING; ARTICLE; BACTERIAL CELL; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL SURVIVAL; BACTERIUM COLONY; CELL VIABILITY; COLONY FORMATION; CULTURE MEDIUM; ESCHERICHIA COLI; EVOLUTIONARY ADAPTATION; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GROWTH CURVE; LIQUID CULTURE; NONHUMAN; PRIORITY JOURNAL; REGULON; STRESS;

ADAPTATION, PHYSIOLOGICAL; BACTERIAL PROTEINS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; RIBOSOMAL PROTEINS; SIGMA FACTOR;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 5144223827     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.104.028704     Document Type: Article

References (27)

1. APPLEMAN, J. A., W. ROSS, J. SALOMON and R. L. GOURSE, 1998 Activation of Escherichia coli rRNA transcription by FIS during a growth cycle. J. Bacteriol. 180: 1525-1532.
2. COMPAN, I., and D. TOUATI, 1993 Interaction of six global transcription regulators in expression of manganese superoxide dismutase in Escherichia coli K-12. J. Bacteriol. 175: 1687-1696.
3. COURCELLE, J., A. KHODURSKY, B. PETER, P. O. BROWN and P. C. HANAWALT, 2001 Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli. Genetics 158: 41-64.
4. CRONAN, J. E., and D. C. LAPORTE, 1996 Tricarboxylic acid cycle and glyoxylate bypass, pp. 206-216 in Escherichia coli and Salmonella: Cellular and Molecular Biology, edited by F. C. NEIDHARDT, R. CURTISS III, J. L. INGRAHAM, E. C. C. LIN, K. B. LOW et al. ASM Press, Washington, DC.
5. D'SOUZA, D. I., and L. HARRISON, 2003 Repair of clustered uracil DNA damages in Escherichia coli. Nucleic Acids Res. 31:4573-4581.
6. DUKAN, S., and T. NYSTROM, 1998 Bacterial senescence: stasis results in increased and differential oxidation of cytoplasmic proteins leading to developmental induction of the heat shock regulon. Genes Dev. 12: 3431-3441.
7. FARRELL, M. J., and S. E. FINKEL, 2003 The growth advantage in stationary-phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. J. Bacteriol. 185: 7044-7052.
8. FERENCI, T., 2001 Hungry bacteria - definition and properties of a nutritional state. Environ. Microbiol. 3: 605-611.
9. GAUSING, K., 1977 Regulation of ribosome production in Escherichia coli: synthesis and stability of ribosomal RNA and of ribosomal protein messenger RNA at different growth rates. J. Mol. Biol. 115: 335-354.
10. HENGGE-ARONIS, R., 2002 Recent insights into the general stress response regulatory network in Escherichia coli. J. Mol. Microbiol. Biotechnol. 4: 341-346.
11. HERBELIN, C. J., S. C. CHIRILLO, K. A. MELNICK and T. S. WHITTAM, 2000 Gene conservation and loss in the mutS-rpoS genomic region of pathogenic Escherichia coli. J. Bacteriol. 182: 5381-5390.
12. HOSFIELD, D. J., Y. GUAN, B. J. HAAS, R. P. CUNNINGHAM and J. A. TAINER, 1999 Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at a basic sites and three-metal-ion catalysis. Cell 98: 397-408.
13. JORGENSEN, F., S. LEACH, S. J. WILDE, A. DAVIES, G. S. STEWART et al., 2000 Invasiveness in chickens, stress resistance and RpoS status of wild-type Salmonella enterica subsp. enterica serovar Typhimurium definitive type 104 and serovar Enteritidis phage type 4 strains. Microbiology 146: 3227-3235.
14. KITAGAWA, M., M. MIYAKAWA, Y. MATSUMURA and T. TSUCHIDO, 2002 Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants. Eur. J. Biochem. 269: 2907-2917.
15. LIU, X., and T. FERENCI, 2001 An analysis of multifactorial influences on the transcriptional control of ompF and ompC porin expression under nutrient limitation. Microbiology 147: 2981-2989.
16. MA, M., and J. W. EATON, 1992 Multicellular oxidant defense in unicellular organisms. Proc. Natl. Acad. Sci. USA 89: 7924-7928.
17. MAKI, Y., H. YOSHIDA and A. WADA, 2000 Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli. Genes Cells 5: 965-974.
18. MARTINEZ-MARTINEZ, L., M. C. CONEJO, A. PASCUAL, S. HERNANDEZ-ALLES, S. BALLESTA et al., 2000 Activities of imipenem and cephalosporins against clonally related strains of Escherichia coli hyperproducing chromosomal beta-lactamase and showing altered porin profiles. Antimicrob. Agents Chemother. 44: 2534-2536.
19. MISSIAKAS, D., and S. RAINA, 1997 Protein misfolding in the cell envelope of Escherichia coli: new signaling pathways. Trends Biochem. Sci. 22: 59-63.
20. MODEL, P., G. JOVANOVIC and J. DWORKIN, 1997 The Escherichia coli phage-shock-protein (psp) operon. Mol. Microbiol. 24: 255-261.
21. 70), promoters, and the kinetics of the steps of transcription initiation, pp. 792-821 in Escherichia coli and Salmonella: Cellular and Molecular Biology, edited by F. C. NEIDHARDT and R. CURTISS. ASM Press, Washington, DC.
22. SEIGNEUR, M., S. D. EHRLICH and B. MICHEL, 1999 recD sbcB sbcD mutants are deficient in recombinational repair of UV lesions by RecBC. J. Bacteriol. 181: 6220-6221.
23. SHAPIRO, J. A., 1992 Pattern and control in bacterial colony development. Sci. Prog. 76: 399-424.
24. STORZ, G., and R. HENGGE-ARONIS, 2000 Bacterial Stress Responses. ASM Press, Washington, DC.
25. STORZ, G., and J. A. IMLAY, 1999 Oxidative stress. Curr. Opin. Microbiol. 2: 188-194.
26. VISWANATHAN, M., V. BURDETT, C. BAITINGER, P. MODRICH and S. T. LOVETT, 2001 Redundant exonuclease involvement in Escherichia coli methyl-directed mismatch repair. J. Biol. Chem. 276: 31053-31058.
27. ZHENG, M., X. WANG, L. J. TEMPLETON, D. R. SMULSKI, R. A. LAROSSA et al., 2001 DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide. J. Bacteriol. 183: 4562-4570.