-
1
-
-
0001895697
-
-
eds Bryson, V. & Vogel, H. J., Academic Press, New York
-
Zuckerkandl, E. & Pauling, L. in Evolving Genes and Proteins (eds Bryson, V. & Vogel, H. J.) 97-166 (Academic Press, New York, 1965).
-
(1965)
Evolving Genes and Proteins
, pp. 97-166
-
-
Zuckerkandl, E.1
Pauling, L.2
-
4
-
-
0003726194
-
-
Wiley, Chichester, UK
-
Chadwick, D. J. & Goode, J. (eds) Antibiotic Resistance: Origins, Evolution, Selection and Spread (Wiley, Chichester, UK, 1997).
-
(1997)
Antibiotic Resistance: Origins, Evolution, Selection and Spread
-
-
Chadwick, D.J.1
Goode, J.2
-
6
-
-
0000547262
-
Periodic selection in Escherichia coli
-
Atwood, K. C., Schneider, L. K. & Ryan, F. J. Periodic selection in Escherichia coli. Proc. Natl Acad. Sci. USA 37, 146-155 (1951).
-
(1951)
Proc. Natl. Acad. Sci. USA
, vol.37
, pp. 146-155
-
-
Atwood, K.C.1
Schneider, L.K.2
Ryan, F.J.3
-
7
-
-
0037649311
-
Evolution observed
-
Ryan, F. J. Evolution observed. Sci. Am. 189, 78-82 (1953).
-
(1953)
Sci. Am.
, vol.189
, pp. 78-82
-
-
Ryan, F.J.1
-
8
-
-
0000388857
-
Evolution under interspecific competition: Field experiments on terrestrial salamanders
-
Hairston, N. G. Evolution under interspecific competition: field experiments on terrestrial salamanders. Evolution 34, 409-420 (1980).
-
(1980)
Evolution
, vol.34
, pp. 409-420
-
-
Hairston, N.G.1
-
9
-
-
0001271789
-
Phylogenetic structure of the prokaryotic domain: The primary kingdoms
-
Woese, C. R. & Fox, G. E. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc. Natl Acad. Sci. USA 74, 5088-5090 (1977).
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5088-5090
-
-
Woese, C.R.1
Fox, G.E.2
-
10
-
-
0034691077
-
Bacteria are different: Observations, interpretations, speculations, and opinions about the mechanisms of adaptive evolution in prokaryotes
-
Levin, B. R. & Bergstrom, C. T. Bacteria are different: observations, interpretations, speculations, and opinions about the mechanisms of adaptive evolution in prokaryotes. Proc. Natl Acad. Sci. USA 97, 6981-6985 (2000).
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6981-6985
-
-
Levin, B.R.1
Bergstrom, C.T.2
-
11
-
-
0037649310
-
-
Chapman & Hall, New York
-
Bell, G. C. Selection (Chapman & Hall, New York, 1997).
-
(1997)
Selection
-
-
Bell, G.C.1
-
12
-
-
0026070176
-
Quantitation of relative fitness and great adaptability of clonal populations of RNA viruses
-
Holland, J. J., de la Torre, J. C., Clarke, D. K. & Duarte, E. A. Quantitation of relative fitness and great adaptability of clonal populations of RNA viruses. J. Virol. 65, 2960-2967 (1991).
-
(1991)
J. Virol.
, vol.65
, pp. 2960-2967
-
-
Holland, J.J.1
De la Torre, J.C.2
Clarke, D.K.3
Duarte, E.A.4
-
13
-
-
0026279651
-
Long-term experimental evolution in Escherichia coli. I. Adaptation and divergence during 2,000 generations
-
Lenski, R. E., Rose, M. R., Simpson, S. C. & Tadler, S. C. Long-term experimental evolution in Escherichia coli. I. Adaptation and divergence during 2,000 generations. Am. Nat. 138, 1315-1341 (1991).
-
(1991)
Am. Nat.
, vol.138
, pp. 1315-1341
-
-
Lenski, R.E.1
Rose, M.R.2
Simpson, S.C.3
Tadler, S.C.4
-
14
-
-
0002368051
-
-
eds Nei, M. & Koehn, R. K., Sinauer, Sunderland, Massachusetts
-
Hall, B. G. in Evolution of Genes and Proteins (eds Nei, M. & Koehn, R. K.) 234-257 (Sinauer, Sunderland, Massachusetts, 1983).
-
(1983)
Evolution of Genes and Proteins
, pp. 234-257
-
-
Hall, B.G.1
-
16
-
-
0028995991
-
Mutation and adaptation: The directed mutation controversy in evolutionary perspective
-
Sniegowski, P. D. & R. E. Lenski. Mutation and adaptation: the directed mutation controversy in evolutionary perspective. Ann. Rev. Ecol. Syst. 26, 553-578 (1995).
-
(1995)
Ann. Rev. Ecol. Syst.
, vol.26
, pp. 553-578
-
-
Sniegowski, P.D.1
Lenski, R.E.2
-
17
-
-
0037398954
-
Regulating general mutation rates: Examination of the hypermutable state model for Cairnsian adaptive mutation
-
Roth J. R. et al. Regulating general mutation rates: examination of the hypermutable state model for Cairnsian adaptive mutation. Genetics 163, 1483-1496 (2003).
-
(2003)
Genetics
, vol.163
, pp. 1483-1496
-
-
Roth, J.R.1
-
18
-
-
0025639253
-
Enzyme activity and fitness: Evolution in solution
-
Dykhuizen, D. E. & Dean, A. M. Enzyme activity and fitness: evolution in solution. Trends Ecol. Evol. 5, 257-262 (1990).
-
(1990)
Trends Ecol. Evol.
, vol.5
, pp. 257-262
-
-
Dykhuizen, D.E.1
Dean, A.M.2
-
19
-
-
0007578768
-
-
eds Baumberg, S., Young, J. P. W., Saunders, S. R. & Wellington, E. M. H., Cambridge Univ. Press, Cambridge, UK
-
Dykhuizen, D. E. in Population Genetics of Bacteria (eds Baumberg, S., Young, J. P. W., Saunders, S. R. & Wellington, E. M. H.) 161-173 (Cambridge Univ. Press, Cambridge, UK, 1995).
-
(1995)
Population Genetics of Bacteria
, pp. 161-173
-
-
Dykhuizen, D.E.1
-
20
-
-
0025527885
-
Experimental studies of natural selection in bacteria
-
Dykhuizen, D. E. Experimental studies of natural selection in bacteria. Ann. Rev. Ecol. Syst. 21, 373-398 (1990).
-
(1990)
Ann. Rev. Ecol. Syst.
, vol.21
, pp. 373-398
-
-
Dykhuizen, D.E.1
-
22
-
-
0031714655
-
The population genetics of adaptation: The distribution of factors fixed during adaptive evolution
-
Orr, H. A. The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Evolution 52, 935-949 (1998).
-
(1998)
Evolution
, vol.52
, pp. 935-949
-
-
Orr, H.A.1
-
25
-
-
0028365256
-
Dynamics of adaptation and diversification: A 10,000-generation experiment with bacterial populations
-
Lenski, R. E. & Travisano, M. Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations. Proc. Natl Acad. Sci. USA 91, 6808-6814 (1994).
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 6808-6814
-
-
Lenski, R.E.1
Travisano, M.2
-
26
-
-
0034641929
-
The population genetics of ecological specialization in evolving Escherichia coli populations
-
Cooper, V. S. & Lenski, R. E. The population genetics of ecological specialization in evolving Escherichia coli populations. Nature 407, 736-739 (2000). This article shows the dynamics of adaptation to glucose over 20,000 generations, along with resource specialization that is caused primarily by antagonistic pleiotropy.
-
(2000)
Nature
, vol.407
, pp. 736-739
-
-
Cooper, V.S.1
Lenski, R.E.2
-
27
-
-
0029072721
-
Exponential increases of RNA virus fitness during repeated transmission
-
Novella, I. S. et al. Exponential increases of RNA virus fitness during repeated transmission. Proc. Natl Acad. Sci. USA 92, 5841-5844 (1995).
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 5841-5844
-
-
Novella, I.S.1
-
28
-
-
0030823001
-
Exceptional convergent evolution in a virus
-
Bull, J. J. et al. Exceptional convergent evolution in a virus. Genetics 147, 1497-1507 (1997).
-
(1997)
Genetics
, vol.147
, pp. 1497-1507
-
-
Bull, J.J.1
-
29
-
-
2642589991
-
Evalutionary dynamics of fitness recovery from the debilitating effects of Muller's ratchet
-
Elena, S. F. et al. Evalutionary dynamics of fitness recovery from the debilitating effects of Muller's ratchet. Evolution 52, 309-314 (1998).
-
(1998)
Evolution
, vol.52
, pp. 309-314
-
-
Elena, S.F.1
-
30
-
-
0037649306
-
Long-term experimental evalution in Escherichia coli. XI. Rejection of non-transitive interactions as cause of declining rate of adaptation
-
De Visser, J. A. G. M. & Lenski, R. E. Long-term experimental evalution in Escherichia coli. XI. Rejection of non-transitive interactions as cause of declining rate of adaptation. BMC Evol. Biol. 2, 19 (2002).
-
(2002)
BMC Evol. Biol.
, vol.2
, pp. 19
-
-
De Visser, J.A.G.M.1
Lenski, R.E.2
-
31
-
-
0033055004
-
Evolution by small steps and rugged landscapes in the RNA virus φ6
-
Burch, C. L. & Chao, L. Evolution by small steps and rugged landscapes in the RNA virus φ6. Genetics 151, 921-927 (1999).
-
(1999)
Genetics
, vol.151
, pp. 921-927
-
-
Burch, C.L.1
Chao, L.2
-
32
-
-
0030017289
-
Punctuated evolution caused by selection of rare beneficial mutations
-
Elena, S. F., Cooper, V. S. & Lenski, R. E. Punctuated evolution caused by selection of rare beneficial mutations. Science 272, 1802-1804 (1996).
-
(1996)
Science
, vol.272
, pp. 1802-1804
-
-
Elena, S.F.1
Cooper, V.S.2
Lenski, R.E.3
-
33
-
-
2542583245
-
The fate of competing beneficial mutations in an asexual population
-
Gemish, P. J. & Lenski, R. E. The fate of competing beneficial mutations in an asexual population. Genetica 102/103, 127-144 (1998).
-
(1998)
Genetica
, vol.102-103
, pp. 127-144
-
-
Gemish, P.J.1
Lenski, R.E.2
-
34
-
-
0035970061
-
Fitness effects of advantageous mutations in evolving Escherichia coli populations
-
Imhof, M. & Schlötterer, C. Fitness effects of advantageous mutations in evolving Escherichia coli populations. Proc. Natl. Acad. Sci. USA 98, 1113-1117 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 1113-1117
-
-
Imhof, M.1
Schlötterer, C.2
-
35
-
-
0037172667
-
Fitness effects of fixed beneficial mutations in microbial populations
-
Rozen, D. E., De Visser, J. A. G. M. & Gerrish, P. J. Fitness effects of fixed beneficial mutations in microbial populations. Curr. Biol. 12, 1040-1045 (2002).
-
(2002)
Curr. Biol.
, vol.12
, pp. 1040-1045
-
-
Rozen, D.E.1
De Visser, J.A.G.M.2
Gerrish, P.J.3
-
36
-
-
0033555421
-
Diminishing returns from mutation supply rate in a sexual populations
-
De Visser, J. A. G. M., Zeyl, C. W., Gemsh, P. J., Blanchard, J. L. & Lenski, R. E. Diminishing returns from mutation supply rate in a sexual populations. Science 283, 404-406 (1999).
-
(1999)
Science
, vol.283
, pp. 404-406
-
-
De Visser, J.A.G.M.1
Zeyl, C.W.2
Gemsh, P.J.3
Blanchard, J.L.4
Lenski, R.E.5
-
37
-
-
0033616661
-
Genomic evolution during a 10,000-generation experiment with bacteria
-
Papadopoulos, D. et al. Genomic evolution during a 10,000-generation experiment with bacteria. Proc. Natl Acad. Sci. USA 96, 3807-3812 (1999).
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3807-3812
-
-
Papadopoulos, D.1
-
38
-
-
0036811766
-
Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations
-
Shaver, A. C. et al. Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations. Genetics 162, 557-566 (2002).
-
(2002)
Genetics
, vol.162
, pp. 557-566
-
-
Shaver, A.C.1
-
39
-
-
0033543602
-
Clonal interference and the evolution of RNA viruses
-
Miralles, R., Gerrish, P. J., Moya, A. & Elena, S. F. Clonal interference and the evolution of RNA viruses. Science 285, 1745-1747 (1999).
-
(1999)
Science
, vol.285
, pp. 1745-1747
-
-
Miralles, R.1
Gerrish, P.J.2
Moya, A.3
Elena, S.F.4
-
40
-
-
0034026084
-
Diminishing returns of population size in the rate of RNA virus adaptation
-
Miralles, R., Moya, A. & Elena, S. F. Diminishing returns of population size in the rate of RNA virus adaptation. J. Virol. 74, 3566-3571 (2000).
-
(2000)
J. Virol.
, vol.74
, pp. 3566-3571
-
-
Miralles, R.1
Moya, A.2
Elena, S.F.3
-
41
-
-
0036811120
-
Molecular basis of adaptive convergence in experimental populations of RNA viruses
-
Cuevas, J. M., Elena, S. F. & Moya, A. Molecular basis of adaptive convergence in experimental populations of RNA viruses. Genetics 162, 533-542 (2002).
-
(2002)
Genetics
, vol.162
, pp. 533-542
-
-
Cuevas, J.M.1
Elena, S.F.2
Moya, A.3
-
42
-
-
0028598147
-
Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat
-
Korona, R., Nakatsu, C. H., Forney, L. J. & Lenski, R. E. Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat. Proc. Natl Acad. Sci. USA 91, 9037-9041 (1994).
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 9037-9041
-
-
Korona, R.1
Nakatsu, C.H.2
Forney, L.J.3
Lenski, R.E.4
-
43
-
-
0034097526
-
The ecology and genetics of fitness in Chlamydomonas. IX. The rate of accumulation of variation of fitness under selection
-
Goho, S. & Bell, G. The ecology and genetics of fitness in Chlamydomonas. IX. The rate of accumulation of variation of fitness under selection. Evolution 54, 416-424 (2000).
-
(2000)
Evolution
, vol.54
, pp. 416-424
-
-
Goho, S.1
Bell, G.2
-
44
-
-
0028163119
-
Long-term experimental evolution in Escherichia coli. II. Changes in lifehistory traits during adaptation to a seasonal environment
-
Vasi, F., Travisano, M. & Lenski, R. E. Long-term experimental evolution in Escherichia coli. II. Changes in lifehistory traits during adaptation to a seasonal environment. Am. Nat. 144, 432-456 (1994).
-
(1994)
Am. Nat.
, vol.144
, pp. 432-456
-
-
Vasi, F.1
Travisano, M.2
Lenski, R.E.3
-
45
-
-
0000595610
-
-
eds Brown, J. H. & West, G. B., Oxford Univ. Press, Oxford, UK
-
Lenski, R. E. & Mongold, J. A. in Scaling in Biology (eds Brown, J. H. & West, G. B.) 221-235 (Oxford Univ. Press, Oxford, UK, 2000).
-
(2000)
Scaling in Biology
, pp. 221-235
-
-
Lenski, R.E.1
Mongold, J.A.2
-
46
-
-
0035043486
-
Rapid phenotypic change and diversification of a soil bacterium during 1000 generations of experimental evolution
-
Riley, M. S., Cooper, V. S., Lenski, R. E., Forney, L. J. & Marsh T. L. Rapid phenotypic change and diversification of a soil bacterium during 1000 generations of experimental evolution. Microbiology 147, 995-1006 (2001).
-
(2001)
Microbiology
, vol.147
, pp. 995-1006
-
-
Riley, M.S.1
Cooper, V.S.2
Lenski, R.E.3
Forney, L.J.4
Marsh, T.L.5
-
47
-
-
0027503713
-
Evolutionary adaptation to temperature. II. Thermal niches of experimental lines of Escherichia coli
-
Bennett, A. F. & Lenski, R. E. Evolutionary adaptation to temperature. II. Thermal niches of experimental lines of Escherichia coli. Evolution 47, 1-12 (1993).
-
(1993)
Evolution
, vol.47
, pp. 1-12
-
-
Bennett, A.F.1
Lenski, R.E.2
-
48
-
-
0030009207
-
Long-term experimental evolution in Escherichia coli. IV. Targets of selection and the specificity of adaptation
-
Travisano, M. & Lenski, R. E. Long-term experimental evolution in Escherichia coli. IV. Targets of selection and the specificity of adaptation. Genetics 143, 15-26 (1996).
-
(1996)
Genetics
, vol.143
, pp. 15-26
-
-
Travisano, M.1
Lenski, R.E.2
-
49
-
-
0038663483
-
Long-term experimental evolution in Escherichia coli. X. Quantifying the fundamental and realized niche
-
Cooper, V. S. Long-term experimental evolution in Escherichia coli. X. Quantifying the fundamental and realized niche. BMC Evol. Biol. 2, 12 (2002).
-
(2002)
BMC Evol. Biol.
, vol.2
, pp. 12
-
-
Cooper, V.S.1
-
50
-
-
0028977087
-
Experimental tests of the roles of adaptation, chance, and history in evolution
-
Trevisano, M., Mongoid, J. A., Bennett, A. F. & Lenski, R. E. Experimental tests of the roles of adaptation, chance, and history in evolution. Science 267, 87-90 (1995).
-
(1995)
Science
, vol.267
, pp. 87-90
-
-
Trevisano, M.1
Mongoid, J.A.2
Bennett, A.F.3
Lenski, R.E.4
-
51
-
-
0034632830
-
Evolvability of an RNA virus is determined by its mutational neighbourhood
-
Burch, C. L. & Chao, L. Evolvability of an RNA virus is determined by its mutational neighbourhood. Nature 406, 625-628 (2000).
-
(2000)
Nature
, vol.406
, pp. 625-628
-
-
Burch, C.L.1
Chao, L.2
-
53
-
-
0030636538
-
Parallel molecular evolution of deletions and nonsense mutations in bacteriophage T7
-
Cunningham, C. W. et al. Parallel molecular evolution of deletions and nonsense mutations in bacteriophage T7. Mol. Biol. Evol. 14, 113-116 (1997).
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 113-116
-
-
Cunningham, C.W.1
-
54
-
-
0033575348
-
Different trajectories of parallel evolution during viral adaptation
-
Wichman, H. A., Badgett, M. R., Scott, L. A., Boulianne, C. M. & Bull, J. J. Different trajectories of parallel evolution during viral adaptation. Science 285, 422-424 (1999).
-
(1999)
Science
, vol.285
, pp. 422-424
-
-
Wichman, H.A.1
Badgett, M.R.2
Scott, L.A.3
Boulianne, C.M.4
Bull, J.J.5
-
55
-
-
0034731035
-
Experimental evolution recapitulates natural evolution
-
Wichman, H. A., Yarber, C. D., Scott, L. A. & Bull, J. J. Experimental evolution recapitulates natural evolution. Phil. Trans. R. Soc. Lond. B 355, 1-8 (2000). A remarkable study of parallel and convergent molecular evolution that is based on the whole-genome sequencing of viruses.
-
(2000)
Phil. Trans. R. Soc. Lond. B
, vol.355
, pp. 1-8
-
-
Wichman, H.A.1
Yarber, C.D.2
Scott, L.A.3
Bull, J.J.4
-
56
-
-
0034035485
-
Big-benefit mutations in bacteriophage inhibited with heat
-
Bull, J. J., Badgett, M. R. & Wichman, H. A. Big-benefit mutations in bacteriophage inhibited with heat. Mol. Biol. Evol. 17, 942-950 (2000).
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 942-950
-
-
Bull, J.J.1
Badgett, M.R.2
Wichman, H.A.3
-
57
-
-
0037381428
-
Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations
-
Lenski, R. E., Winkworth, C. L. & Riley, M. A. Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations. J. Mol. Evol. 56, 498-508 (2003).
-
(2003)
J. Mol. Evol.
, vol.56
, pp. 498-508
-
-
Lenski, R.E.1
Winkworth, C.L.2
Riley, M.A.3
-
58
-
-
0037417962
-
Parallel changes in gene expression after 20,000 generations of evolution in E. coli
-
Cooper, T. F., Rozen, D. E. & Lenski, R. E. Parallel changes in gene expression after 20,000 generations of evolution in E. coli. Proc. Natl Acad. Sci. USA 100, 1072-1077 (2003). Whole-genome arrays show parallel changes in gene expression, which led to the discovery of beneficial mutations in an important regulatory gene.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1072-1077
-
-
Cooper, T.F.1
Rozen, D.E.2
Lenski, R.E.3
-
59
-
-
0033028251
-
OmpF changes and the complexity of Escherichia coli adaptation to prolonged lactose limitation
-
Zhang, E. & Ferenci, T. OmpF changes and the complexity of Escherichia coli adaptation to prolonged lactose limitation. FEMS Microbiol. Lett. 176, 395-401 (1999).
-
(1999)
FEMS Microbiol. Lett.
, vol.176
, pp. 395-401
-
-
Zhang, E.1
Ferenci, T.2
-
60
-
-
0033068938
-
Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations
-
Notley-McRobb, L. & Ferenci, T. Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations. Env. Microbiol. 1, 33-43 (1999).
-
(1999)
Env. Microbiol.
, vol.1
, pp. 33-43
-
-
Notley-McRobb, L.1
Ferenci, T.2
-
61
-
-
0033068946
-
The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli
-
Notley-McRobb, L. & Ferenci, T. The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli. Env. Microbiol. 1, 45-52 (1999). Candidate loci that are involved in glucose transport show diverse mutational pathways to enhanced fitness in chemostat-adapted populations.
-
(1999)
Env. Microbiol.
, vol.1
, pp. 45-52
-
-
Notley-McRobb, L.1
Ferenci, T.2
-
62
-
-
0034532082
-
Experimental analysis of molecular events during mutational periodic selections in bacterial evolution
-
Notley-McRobb, L. & Ferenci, T. Experimental analysis of molecular events during mutational periodic selections in bacterial evolution. Genetics 156, 1493-1501 (2000).
-
(2000)
Genetics
, vol.156
, pp. 1493-1501
-
-
Notley-McRobb, L.1
Ferenci, T.2
-
63
-
-
0028094645
-
Microbial evolution in a simple unstructured environment: Genetic differentiation in Escherichia coli
-
Rosenzweig, R. F., Sharp, R. R., Treves, D. S. & Adams, J. Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli. Genetics 137, 903-917 (1994).
-
(1994)
Genetics
, vol.137
, pp. 903-917
-
-
Rosenzweig, R.F.1
Sharp, R.R.2
Treves, D.S.3
Adams, J.4
-
64
-
-
0031876504
-
Repeated evolution of an acetate-crossfeeding polymorphism in long-term populations of Escherichia coli
-
Treves, D. S., Manning, S. & Adams, J. Repeated evolution of an acetate-crossfeeding polymorphism in long-term populations of Escherichia coli. Mol. Biol. Evol. 15, 789-797 (1998).
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 789-797
-
-
Treves, D.S.1
Manning, S.2
Adams, J.3
-
65
-
-
0026522792
-
Selection of laboratory wildtype phenotype from natural isolates of Escherichia coli in chemostats
-
Mikkola, R. & Kurland, C. G. Selection of laboratory wildtype phenotype from natural isolates of Escherichia coli in chemostats. Mol. Biol. Evol. 9, 394-402 (1992).
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 394-402
-
-
Mikkola, R.1
Kurland, C.G.2
-
66
-
-
0027510647
-
Microbial competition: Escherichia coli mutants that take over stationary phase cultures
-
Zambrano, M. M., Siegele, D. A., Almiron, M., Tormo, A. & Kolter, R. Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science 259, 1757-1760 (1993). Selection under starvation conditions favours mutations in a σ-factor.
-
(1993)
Science
, vol.259
, pp. 1757-1760
-
-
Zambrano, M.M.1
Siegele, D.A.2
Almiron, M.3
Tormo, A.4
Kolter, R.5
-
67
-
-
0033616769
-
Evolution of microbial diversity during prolonged starvation
-
Finkel, S. E. & Kolter, R. Evolution of microbial diversity during prolonged starvation. Proc. Natl Acad. Sci. USA 96, 4023-4027 (1999).
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 4023-4027
-
-
Finkel, S.E.1
Kolter, R.2
-
68
-
-
0033912882
-
Prolonged stationary-phase incubation selects for Irp mutations in Escherichia coli K-12
-
Zinser, E. R. & Kolter, R. Prolonged stationary-phase incubation selects for Irp mutations in Escherichia coli K-12. J. Bacteriol. 182, 4361-4365 (2000).
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4361-4365
-
-
Zinser, E.R.1
Kolter, R.2
-
69
-
-
0025919511
-
Identification of adaptive changes in an evolving population of Escherichia coli: The role of changes with regulatory and highly pleiotropic effects
-
Kurlandzka, A., Rosenzweig, R. F. & Adams, J. Identification of adaptive changes in an evolving population of Escherichia coli: the role of changes with regulatory and highly pleiotropic effects. Mol. Biol. Evol. 8, 261-281 (1991).
-
(1991)
Mol. Biol. Evol.
, vol.8
, pp. 261-281
-
-
Kurlandzka, A.1
Rosenzweig, R.F.2
Adams, J.3
-
70
-
-
0033578424
-
Systematic changes in gene expression patterns following adaptive evolution in yeast
-
Ferea, T. L., Botstein, D., Brown, P. O. & Rosenzweig, R. F. Systematic changes in gene expression patterns following adaptive evolution in yeast. Proc. Natl Acad. Sci. USA 96, 9721-9726 (1999). The first application of gene-expression arrays to experimental evolution, showing parallel changes in central metabolism in three yeast lines.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 9721-9726
-
-
Ferea, T.L.1
Botstein, D.2
Brown, P.O.3
Rosenzweig, R.F.4
-
71
-
-
0041625721
-
Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature
-
in the press
-
Riehle, M. R., Bennett, A. F., Lenski, R. E. & Long, A. D. Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature. Physiol. Genomics (in the press).
-
Physiol. Genomics
-
-
Riehle, M.R.1
Bennett, A.F.2
Lenski, R.E.3
Long, A.D.4
-
72
-
-
0034051543
-
Evolution of drug resistance in experimental populations of Candida albicans
-
Cowen, L. E. et al. Evolution of drug resistance in experimental populations of Candida albicans. J. Bacteriol. 182, 1515-1522 (2000).
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1515-1522
-
-
Cowen, L.E.1
-
73
-
-
0037047077
-
Population genomics of drug resistance in Candida albicans
-
Cowen, L. E. et al. Population genomics of drug resistance in Candida albicans. Proc. Natl Acad. Sci. USA 99, 9284-9289 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9284-9289
-
-
Cowen, L.E.1
-
74
-
-
0016669094
-
Evolution at two levels in humans and chimpanzees
-
King, M.-C. & Wilson, A. C. Evolution at two levels in humans and chimpanzees. Science 188, 107-116 (1975).
-
(1975)
Science
, vol.188
, pp. 107-116
-
-
King, M.-C.1
Wilson, A.C.2
-
75
-
-
0027021398
-
The population biology and evolutionary significance of Ty elements in Saccharomyces cerevisiae
-
Wilke, C. M., Maimer, E. & Adams, J. The population biology and evolutionary significance of Ty elements in Saccharomyces cerevisiae. Genetica 86, 155-173 (1992).
-
(1992)
Genetica
, vol.86
, pp. 155-173
-
-
Wilke, C.M.1
Maimer, E.2
Adams, J.3
-
76
-
-
0037058930
-
Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae
-
Dunham, M. J. et al. Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae. Proc. Natl Acad. Sci. USA 99, 16144-16149 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 16144-16149
-
-
Dunham, M.J.1
-
77
-
-
0028911404
-
Dynamics of IS-related genetic rearrangements in resting Escherichia coli K-12
-
Naas, T., Blot, M., Fitch, W. M. & Arber, W. Dynamics of IS-related genetic rearrangements in resting Escherichia coli K-12. Mol. Biol. Evol. 12, 198-207 (1995). Shows the usefulness of transposable elements for discovering cryptic genetic changes, even in cultures that are 'stored' at room temperature.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 198-207
-
-
Naas, T.1
Blot, M.2
Fitch, W.M.3
Arber, W.4
-
78
-
-
0033786720
-
Long-term experimental evolution in Escherichia coli. IX. Characterization of insertion sequence-mediated mutations and rearrangements
-
Schneider, D., Duperchy, E., Coursange, E., Lenski, R. E. & Blot, M. Long-term experimental evolution in Escherichia coli. IX. Characterization of insertion sequence-mediated mutations and rearrangements. Genetics 156, 477-488 (2000).
-
(2000)
Genetics
, vol.156
, pp. 477-488
-
-
Schneider, D.1
Duperchy, E.2
Coursange, E.3
Lenski, R.E.4
Blot, M.5
-
79
-
-
0035046481
-
Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B
-
Cooper, V. S., Schneider, D., Blot, M. & Lenski, R. E. Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B. J. Bacteriol. 183, 2834-2841 (2001).
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2834-2841
-
-
Cooper, V.S.1
Schneider, D.2
Blot, M.3
Lenski, R.E.4
-
80
-
-
0035895278
-
Genetic architecture of thermal adaptation in Escherichia coli
-
Riehle, M. M., Bennett, A. F. & Long, A. D. Genetic architecture of thermal adaptation in Escherichia coli. Proc. Natl Acad. Sci. USA 98, 525-530 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 525-530
-
-
Riehle, M.M.1
Bennett, A.F.2
Long, A.D.3
-
83
-
-
0001333091
-
A complex community in a simple habitat: An experimental study with bacteria and phage
-
Chao, L., Levin, B. R. & Stewart, F. M. A complex community in a simple habitat: an experimental study with bacteria and phage. Ecology 58, 369-378 (1977).
-
(1977)
Ecology
, vol.58
, pp. 369-378
-
-
Chao, L.1
Levin, B.R.2
Stewart, F.M.3
-
84
-
-
0022216068
-
Constraints on the coevolution of bacteria and virulent phage: A model, some experiments, and predictions for natural communities
-
Lenski, R. E. & Levin, B. R. Constraints on the coevolution of bacteria and virulent phage: a model, some experiments, and predictions for natural communities. Am. Nat. 125, 585-602 (1985).
-
(1985)
Am. Nat.
, vol.125
, pp. 585-602
-
-
Lenski, R.E.1
Levin, B.R.2
-
85
-
-
0001498389
-
Experimental studies of pleiotropy and eplstasis in Escherichia coli. I. Variation in competitive fitness among mutants resistant to virus T4
-
Lenski, R. E. Experimental studies of pleiotropy and eplstasis in Escherichia coli. I. Variation in competitive fitness among mutants resistant to virus T4. Evolution 42, 425-432 (1988).
-
(1988)
Evolution
, vol.42
, pp. 425-432
-
-
Lenski, R.E.1
-
86
-
-
0034049514
-
The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness
-
Funchain, P., Yeung, A. Stewart, J. L., Lin, R., Slupsa, M. M. & Miller, J. H. The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness. Genetics 154, 959-970 (2000).
-
(2000)
Genetics
, vol.154
, pp. 959-970
-
-
Funchain, P.1
Yeung, A.2
Stewart, J.L.3
Lin, R.4
Slupsa, M.M.5
Miller, J.H.6
-
87
-
-
0035970874
-
Costs and benefits of high mutation rates: Adaptive evolution of bacteria in the mouse gut
-
Giraud, A. et al. Costs and benefits of high mutation rates: adaptive evolution of bacteria in the mouse gut. Science 291, 2606-2608 (2001). Pioneering work that shows that rigorous evolution experiments can be carried out in animal hosts, and also indicates important effects of mutator genotypes.
-
(2001)
Science
, vol.291
, pp. 2606-2608
-
-
Giraud, A.1
-
88
-
-
0029666981
-
Evolutionary adaptation to temperature. IV. Adaptation of Escherichia coli at a niche boundary
-
Mongold, J. A., Bennett, A. F. & Lenski, R. E. Evolutionary adaptation to temperature. IV. Adaptation of Escherichia coli at a niche boundary. Evolution 50, 35-43 (1996).
-
(1996)
Evolution
, vol.50
, pp. 35-43
-
-
Mongold, J.A.1
Bennett, A.F.2
Lenski, R.E.3
-
89
-
-
0028812486
-
Long-term experimental evolution in Escherichia coli. III. Variation among replicate populations in correlated responses to novel environments
-
Travisano, M., Vasi, F. & Lenski, R. E. Long-term experimental evolution in Escherichia coli. III. Variation among replicate populations in correlated responses to novel environments. Evolution 49, 189-200 (1995).
-
(1995)
Evolution
, vol.49
, pp. 189-200
-
-
Travisano, M.1
Vasi, F.2
Lenski, R.E.3
-
90
-
-
0031004133
-
Long-term experimental evolution in Escherichia coli. VI. Environmental constraints on adaptation and divergence
-
Travisano, M. Long-term experimental evolution in Escherichia coli. VI. Environmental constraints on adaptation and divergence. Genetics 146, 471-479 (1997).
-
(1997)
Genetics
, vol.146
, pp. 471-479
-
-
Travisano, M.1
-
91
-
-
0000139226
-
Evolution of competitive ability in Escherichia coli
-
Dykhuizen, D. & Hartl, D. Evolution of competitive ability in Escherichia coli. Evolution 35, 581-594 (1981).
-
(1981)
Evolution
, vol.35
, pp. 581-594
-
-
Dykhuizen, D.1
Hartl, D.2
-
92
-
-
0033037217
-
Evolutionary tradeoffs under conditions of resource abundance and scarcity: Experiments with bacteria
-
Velicer, G. J. & Lenski, R. E. Evolutionary tradeoffs under conditions of resource abundance and scarcity: experiments with bacteria. Ecology 80, 1168-1179 (1999).
-
(1999)
Ecology
, vol.80
, pp. 1168-1179
-
-
Velicer, G.J.1
Lenski, R.E.2
-
93
-
-
85047678881
-
Experimental evolution in Chlamydomonas. III. Evolution of specialist and generalist types in environments that vary in space and time
-
Reboud, X. & Bell, G. Experimental evolution in Chlamydomonas. III. Evolution of specialist and generalist types in environments that vary in space and time. Heredity 78, 507-514 (1997).
-
(1997)
Heredity
, vol.78
, pp. 507-514
-
-
Reboud, X.1
Bell, G.2
-
94
-
-
0028838604
-
Extreme fitness differences in mammalian and insect hosts after continuous replication of vesicular stomatitis virus in sandly cells
-
Novella, I. S. et al. Extreme fitness differences in mammalian and insect hosts after continuous replication of vesicular stomatitis virus in sandly cells. J. Virol. 69, 6805-6809 (1995).
-
(1995)
J. Virol.
, vol.69
, pp. 6805-6809
-
-
Novella, I.S.1
-
95
-
-
0033978271
-
Evolutionary reversals during viral adaptation to alternating hosts
-
Crill, W. D., Wichman, H. A. & Bull, J. J. Evolutionary reversals during viral adaptation to alternating hosts. Genetics 154, 27-37 (2000).
-
(2000)
Genetics
, vol.154
, pp. 27-37
-
-
Crill, W.D.1
Wichman, H.A.2
Bull, J.J.3
-
96
-
-
0034535109
-
Cost of host radiation in an RNA virus
-
Turner, P. E. & Elena, S. F. Cost of host radiation in an RNA virus. Genetics 156, 1465-1670 (2000). A study, using viruses, that shows the tradeoffs on the original host during adaptation to new hosts, as well as selection for generalists in fluctuating environments.
-
(2000)
Genetics
, vol.156
, pp. 1465-1670
-
-
Turner, P.E.1
Elena, S.F.2
-
97
-
-
0035047929
-
Differential evolution of eastern equine encephalitis virus populations in response to host cell type
-
Cooper, L. A. & Scott, T. W. Differential evolution of eastern equine encephalitis virus populations in response to host cell type. Genetics 157, 1403-1412 (2001).
-
(2001)
Genetics
, vol.157
, pp. 1403-1412
-
-
Cooper, L.A.1
Scott, T.W.2
-
98
-
-
0032924195
-
Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells
-
Weaver, W. C., Brault, A. C., Kang, W. & Holland, J. J. Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells. J. Virol. 73, 4316-4326 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 4316-4326
-
-
Weaver, W.C.1
Brault, A.C.2
Kang, W.3
Holland, J.J.4
-
99
-
-
0033515583
-
Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells
-
Novella, I. S., Hershey, C. L., Escarmis, C., Domingo, E. & Holland, J. J. Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells. J. Mol. Biol. 287, 459-465 (1999).
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 459-465
-
-
Novella, I.S.1
Hershey, C.L.2
Escarmis, C.3
Domingo, E.4
Holland, J.J.5
-
100
-
-
0032553467
-
Experimental evolution of parasites
-
Ebert, D. Experimental evolution of parasites. Science 282, 1432-1435 (1998).
-
(1998)
Science
, vol.282
, pp. 1432-1435
-
-
Ebert, D.1
-
101
-
-
0004228157
-
-
ASM, Washington
-
Friedberg, E. C., Walker, G. C. & Siede, W. DNA Repair and Mutagenesis (ASM, Washington, 1995).
-
(1995)
DNA Repair and Mutagenesis
-
-
Friedberg, E.C.1
Walker, G.C.2
Siede, W.3
-
102
-
-
0020625499
-
Transposable elements as mutator genes in evolution
-
Chao, L., Vargas, C., Spear, B. B. & Cox, E. C. Transposable elements as mutator genes in evolution. Nature 303, 633-635 (1983).
-
(1983)
Nature
, vol.303
, pp. 633-635
-
-
Chao, L.1
Vargas, C.2
Spear, B.B.3
Cox, E.C.4
-
103
-
-
0030620272
-
Role of mutator alleles in adaptive evolution
-
Taddei, F. et al. Role of mutator alleles in adaptive evolution. Nature 387, 700-702 (1997). A theoretical model that shows the complex dynamics and effects of alleles that cause increased mutation rates in asexual populations.
-
(1997)
Nature
, vol.387
, pp. 700-702
-
-
Taddei, F.1
-
104
-
-
0029860724
-
High mutation frequencies among Escherichia coli and Salmonella pathogens
-
LeClerc, J. E., Li, B., Payne, W. L. & Cebula, T. A. High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 274, 1208-1211 (1996).
-
(1996)
Science
, vol.274
, pp. 1208-1211
-
-
LeClerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
105
-
-
0034685940
-
High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection
-
Oliver, A., Canton, R., Campo, P., Baquero, F. & Blázquez, J. High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288, 1251-1253 (2000).
-
(2000)
Science
, vol.288
, pp. 1251-1253
-
-
Oliver, A.1
Canton, R.2
Campo, P.3
Baquero, F.4
Blázquez, J.5
-
106
-
-
0031023159
-
Proliferation of mutators in a cell population
-
Mao, E. F., Lane, L. Lee, J. & Miller, J. H. Proliferation of mutators in a cell population. J. Bacteriol. 179, 417-422 (1997).
-
(1997)
J. Bacteriol.
, vol.179
, pp. 417-422
-
-
Mao, E.F.1
Lane, L.2
Lee, J.3
Miller, J.H.4
-
107
-
-
0030620273
-
Evolution of high mutation rates in experimental populations of E. coli
-
Sniegowski, P. D., Gerrish, P. J. & Lenski, R. E. Evolution of high mutation rates in experimental populations of E. coll. Nature 387, 703-705 (1997). This article documents the spontaneous evolution of repair-defective mutators during long-term adaptation to a new environment.
-
(1997)
Nature
, vol.387
, pp. 703-705
-
-
Sniegowski, P.D.1
Gerrish, P.J.2
Lenski, R.E.3
-
108
-
-
0036860714
-
Enrichment and elimination of mutY mutators in Escherichia coli populations
-
Notley-McRobb, L., Seeto, S. & Ferenci, T. F. Enrichment and elimination of mutY mutators in Escherichia coli populations. Genetics 162, 1055-1062 (2002).
-
(2002)
Genetics
, vol.162
, pp. 1055-1062
-
-
Notley-McRobb, L.1
Seeto, S.2
Ferenci, T.F.3
-
109
-
-
0021032993
-
Competition between high and low mutating strains of Escherichia coli
-
Chao, L. & Cox, E. C. Competition between high and low mutating strains of Escherichia coli. Evolution 37, 125-134 (1983). An elegant experiment showing how the fate of a mutator allele depends, in a stochastic manner, on its abundance in a population.
-
(1983)
Evolution
, vol.37
, pp. 125-134
-
-
Chao, L.1
Cox, E.C.2
-
110
-
-
1842472689
-
Phenotypic and genomic evolution during a 20,000-generation experiment with the bacterium, Escherichia coli
-
in the press
-
Lenski, R. E. Phenotypic and genomic evolution during a 20,000-generation experiment with the bacterium, Escherichia coli. Plant Breed. Rev. (in the press).
-
Plant Breed. Rev.
-
-
Lenski, R.E.1
-
111
-
-
50549201557
-
The relation of recombination to mutational advance
-
Muller, H. J. The relation of recombination to mutational advance. Mut. Res. 1, 2-9 (1964).
-
(1964)
Mut. Res.
, vol.1
, pp. 2-9
-
-
Muller, H.J.1
-
112
-
-
0018029597
-
The accumulation of deleterious genes in a population: Muller's ratchet
-
Haigh, J. The accumulation of deleterious genes in a population: Muller's ratchet. Theor. Pop. Biol. 14, 251-267 (1978).
-
(1978)
Theor. Pop. Biol.
, vol.14
, pp. 251-267
-
-
Haigh, J.1
-
113
-
-
0001057383
-
The viability of near-normal irradiated chromosomes
-
Bateman, A. J. The viability of near-normal irradiated chromosomes. Int. J. Radiat. Biol. 1, 170-180 (1959).
-
(1959)
Int. J. Radiat. Biol.
, vol.1
, pp. 170-180
-
-
Bateman, A.J.1
-
114
-
-
0031769320
-
Inference of genome-wide mutation rates and distribution of mutation effects for fitness traits: A simulation study
-
Keightley, P. D. Inference of genome-wide mutation rates and distribution of mutation effects for fitness traits: a simulation study. Genetics 150, 1283-t293 (1998).
-
(1998)
Genetics
, vol.150
, pp. 1283-1293
-
-
Keightley, P.D.1
-
115
-
-
0000577181
-
The genetic structure of natural populations of Drosophila melanogaster. VII. Synergistic interaction of spontaneous mutant polygenes controlling viability
-
Mukai, T. The genetic structure of natural populations of Drosophila melanogaster. VII. Synergistic interaction of spontaneous mutant polygenes controlling viability. Genetics 61, 749-761 (1969).
-
(1969)
Genetics
, vol.61
, pp. 749-761
-
-
Mukai, T.1
-
116
-
-
0023713896
-
Evolution of sex in RNA viruses
-
Chao, L. Evolution of sex in RNA viruses. J. Theor. Biol. 133, 99-112 (1988).
-
(1988)
J. Theor. Biol.
, vol.133
, pp. 99-112
-
-
Chao, L.1
-
117
-
-
0023737547
-
Deleterious mutations and the evolution of sexual reproduction
-
Kondrashov, A. S. Deleterious mutations and the evolution of sexual reproduction. Nature 336, 435-440 (1988).
-
(1988)
Nature
, vol.336
, pp. 435-440
-
-
Kondrashov, A.S.1
-
118
-
-
0027486081
-
Classification of hypotheses on the advantage of amphimixis
-
Kondrashov, A. S. Classification of hypotheses on the advantage of amphimixis. J. Hered. 84, 372-387 (1993).
-
(1993)
J. Hered.
, vol.84
, pp. 372-387
-
-
Kondrashov, A.S.1
-
119
-
-
0025682946
-
Mutation load and the survival of small populations
-
Lynch, M. & Gabriel, W. Mutation load and the survival of small populations. Evolution 44, 1725-1737 (1990).
-
(1990)
Evolution
, vol.44
, pp. 1725-1737
-
-
Lynch, M.1
Gabriel, W.2
-
120
-
-
0029866448
-
Accelerated evolution and Muller's ratchet in endosymbiotic bacteria
-
Moran, N. A. Accelerated evolution and Muller's ratchet in endosymbiotic bacteria. Proc. Natl Acad. Sci. USA 93, 2873-2878 (1996).
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 2873-2878
-
-
Moran, N.A.1
-
121
-
-
0034972360
-
Mutational meltdown in laboratory yeast populations
-
Zeyl, C., Mizesko, M. & De Visser, J. A. G. M. Mutational meltdown in laboratory yeast populations. Evolution 55, 909-917 (2001).
-
(2001)
Evolution
, vol.55
, pp. 909-917
-
-
Zeyl, C.1
Mizesko, M.2
De Visser, J.A.G.M.3
-
122
-
-
0025244957
-
Fitness of RNA virus decreased by Muller's ratchet
-
Chao, L. Fitness of RNA virus decreased by Muller's ratchet. Nature 348, 454-455 (1990). An early study that shows the rapid decline in fitness of populations propagated through severe bottlenecks.
-
(1990)
Nature
, vol.348
, pp. 454-455
-
-
Chao, L.1
-
123
-
-
0026729636
-
Rapid fitness losses in mammalian RNA virus clones due to Muller's ratchet
-
Duarte, E. A., Clarke, D. K., Moya, A., Domingo, E. & Holland, J. J. Rapid fitness losses in mammalian RNA virus clones due to Muller's ratchet. Proc. Natl Acad. Sci. USA 89, 6015-6019 (1992).
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 6015-6019
-
-
Duarte, E.A.1
Clarke, D.K.2
Moya, A.3
Domingo, E.4
Holland, J.J.5
-
124
-
-
0030606306
-
Genetic lesions associated with Muller's ratchet in a RNA virus
-
Escarmis, C. et al. Genetic lesions associated with Muller's ratchet in a RNA virus. J. Mol. Biol. 264, 255-267 (1996).
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 255-267
-
-
Escarmis, C.1
-
125
-
-
0032748221
-
Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus
-
Elena, S. F. & Moya, A. Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus. J. Evol. Biol. 12, 1078-1088 (1999).
-
(1999)
J. Evol. Biol.
, vol.12
, pp. 1078-1088
-
-
Elena, S.F.1
Moya, A.2
-
126
-
-
0343963783
-
Effect of deleterious mutation-accumulation on the fitness of RNA bacteriophage MS2
-
de la Peña, M., Elena, S. F. & Moya, A. Effect of deleterious mutation-accumulation on the fitness of RNA bacteriophage MS2. Evolution 54, 686-691 (2000).
-
(2000)
Evolution
, vol.54
, pp. 686-691
-
-
De la Peña, M.1
Elena, S.F.2
Moya, A.3
-
127
-
-
0345471842
-
Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events
-
Yuste, E., Sánchez-Palomino, S., Casado, C., Domingo, E. & López-Galíndez, C. Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events. J. Virol. 73, 2745-2751 (2000).
-
(2000)
J. Virol.
, vol.73
, pp. 2745-2751
-
-
Yuste, E.1
Sánchez-Palomino, S.2
Casado, C.3
Domingo, E.4
López-Galíndez, C.5
-
128
-
-
0029931416
-
Estimate of the genomic mutation rate deleterious to overall fitness in E. coli
-
Kibota, T. T. & Lynch, M. Estimate of the genomic mutation rate deleterious to overall fitness in E. coli. Nature 381, 694-696 (1996).
-
(1996)
Nature
, vol.381
, pp. 694-696
-
-
Kibota, T.T.1
Lynch, M.2
-
129
-
-
0037161813
-
Endosymbiotic bacteria: GroEL buffers against deleterious mutations
-
Fares, M. A., Ruiz-González, M. X., Moya, A., Elena, S. F. & Barrio, E. Endosymbiotic bacteria: GroEL buffers against deleterious mutations. Nature 417, 398 (2002).
-
(2002)
Nature
, vol.417
, pp. 398
-
-
Fares, M.A.1
Ruiz-González, M.X.2
Moya, A.3
Elena, S.F.4
Barrio, E.5
-
130
-
-
0034765995
-
Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae
-
Wloch, D. M., Szafraniec, K., Borts, R. H. & Korona, R. Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae. Genetics 159, 441-452 (2001).
-
(2001)
Genetics
, vol.159
, pp. 441-452
-
-
Wloch, D.M.1
Szafraniec, K.2
Borts, R.H.3
Korona, R.4
-
131
-
-
0035148461
-
Estimates of the rate and distribution of fitness effects of spontaneous mutation in Saccharomyces cerevisiae
-
Zeyl, C. & De Visser, J. A. G. M. Estimates of the rate and distribution of fitness effects of spontaneous mutation in Saccharomyces cerevisiae. Genetics 157, 53-61 (2001).
-
(2001)
Genetics
, vol.157
, pp. 53-61
-
-
Zeyl, C.1
De Visser, J.A.G.M.2
-
132
-
-
0035913336
-
Evolution of digital organisms at high mutation rate leads to survival of the flattest
-
Wilke, C. O, Wang, J., Ofria, C., Lenski, R. E. & Adami, C. Evolution of digital organisms at high mutation rate leads to survival of the flattest. Nature 412, 331-333 (2001).
-
(2001)
Nature
, vol.412
, pp. 331-333
-
-
Wilke, C.O.1
Wang, J.2
Ofria, C.3
Lenski, R.E.4
Adami, C.5
-
133
-
-
0034615640
-
Pervasive compensatory adaptation in Escherichia coli
-
Moore, F. B.-G., Rozen, D. E. & Lenski, R. E. Pervasive compensatory adaptation in Escherichia coli. Proc. R. Soc. Lond. B 267, 515-522 (2000).
-
(2000)
Proc. R. Soc. Lond. B
, vol.267
, pp. 515-522
-
-
Moore, F.B.-G.1
Rozen, D.E.2
Lenski, R.E.3
-
134
-
-
0034625007
-
Computation, prediction, and experimental tests of fitness for bacteriophage T7 mutants with permuted genomes
-
Endy, D., You, L. C., Yin, J. & Molineux, I. J. Computation, prediction, and experimental tests of fitness for bacteriophage T7 mutants with permuted genomes. Proc. Natl Acad. Sci. USA 97, 5375-5380 (2000).
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 5375-5380
-
-
Endy, D.1
You, L.C.2
Yin, J.3
Molineux, I.J.4
-
135
-
-
0036239186
-
Dependence of epistasis on environment and mutation severity as revealed by in silico mutagenesis of phage T7
-
You, L. C. & Yin, J. Dependence of epistasis on environment and mutation severity as revealed by in silico mutagenesis of phage T7. Genetics 160, 1273-1281 (2002).
-
(2002)
Genetics
, vol.160
, pp. 1273-1281
-
-
You, L.C.1
Yin, J.2
-
136
-
-
0037079023
-
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
-
Ibarra, R. U., Edwards, J. S. & Palsson, B. O. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420, 186-189 (2002).
-
(2002)
Nature
, vol.420
, pp. 186-189
-
-
Ibarra, R.U.1
Edwards, J.S.2
Palsson, B.O.3
-
137
-
-
0038668776
-
The evolutionary origin of complex features
-
Lenski, R. E., Ofria, C., Pennock, R. T. & Adami, C. The evolutionary origin of complex features. Nature 423, 139-144 (2003).
-
(2003)
Nature
, vol.423
, pp. 139-144
-
-
Lenski, R.E.1
Ofria, C.2
Pennock, R.T.3
Adami, C.4
|