-
1
-
-
83755192039
-
Skeletal muscle proteomics: current approaches, technical challenges and emerging techniques
-
Ohlendieck K. Skeletal muscle proteomics: current approaches, technical challenges and emerging techniques. Skeletal Muscle 2011, 1:6.
-
(2011)
Skeletal Muscle
, vol.1
, pp. 6
-
-
Ohlendieck, K.1
-
2
-
-
77953931940
-
Skeletal muscle proteomics in livestock production
-
Picard B., Berri C., Lefaucheur L., Molette C., Sayd T., Terlouw C. Skeletal muscle proteomics in livestock production. Brief Funct Genomics 2010, 9:259-278.
-
(2010)
Brief Funct Genomics
, vol.9
, pp. 259-278
-
-
Picard, B.1
Berri, C.2
Lefaucheur, L.3
Molette, C.4
Sayd, T.5
Terlouw, C.6
-
3
-
-
34250634816
-
Application of proteomics to understand the molecular mechanisms behind meat quality
-
Hollung K., Veiseth E., Jia X., Færgestad E.M., Hildrum K.I. Application of proteomics to understand the molecular mechanisms behind meat quality. Meat Sci 2007, 77:97-104.
-
(2007)
Meat Sci
, vol.77
, pp. 97-104
-
-
Hollung, K.1
Veiseth, E.2
Jia, X.3
Færgestad, E.M.4
Hildrum, K.I.5
-
4
-
-
83055169961
-
Identification by proteomic analysis of early post-mortem markers involved in the variability in fat loss during cooking of mule duck "foie gras"
-
Theron L., Fernandez X., Marty-Gasset N., Pichereaux C., Rossignol M., Chambon C., et al. Identification by proteomic analysis of early post-mortem markers involved in the variability in fat loss during cooking of mule duck "foie gras". J Agric Food Chem 2011, 59:12617-12628.
-
(2011)
J Agric Food Chem
, vol.59
, pp. 12617-12628
-
-
Theron, L.1
Fernandez, X.2
Marty-Gasset, N.3
Pichereaux, C.4
Rossignol, M.5
Chambon, C.6
-
5
-
-
61449163906
-
Invited review: proteomics of milk and bacteria used in fermented dairy products: from qualitative to quantitative advances
-
Gagnaire V., Jardin J., Jan G., Lortal S. Invited review: proteomics of milk and bacteria used in fermented dairy products: from qualitative to quantitative advances. J Dairy Sci 2009, 92:811-825.
-
(2009)
J Dairy Sci
, vol.92
, pp. 811-825
-
-
Gagnaire, V.1
Jardin, J.2
Jan, G.3
Lortal, S.4
-
6
-
-
78650404444
-
Proteomic analysis of egg white proteins during storage
-
Omana D.A., Liang Y., Kav N.N.V., Wu J. Proteomic analysis of egg white proteins during storage. Proteomics 2011, 11:144-153.
-
(2011)
Proteomics
, vol.11
, pp. 144-153
-
-
Omana, D.A.1
Liang, Y.2
Kav, N.N.V.3
Wu, J.4
-
7
-
-
77249107516
-
The egg white and yolk interactomes as gleaned from extensive proteomic data
-
D'Alessandro A., Righetti P.G., Fasoli E., Zolla L. The egg white and yolk interactomes as gleaned from extensive proteomic data. J Proteomics 2010, 73:1028-1042.
-
(2010)
J Proteomics
, vol.73
, pp. 1028-1042
-
-
D'Alessandro, A.1
Righetti, P.G.2
Fasoli, E.3
Zolla, L.4
-
8
-
-
20044374515
-
Towards royal jelly proteome
-
Scarselli R., Donadio E., Giuffrida M.G., Fortunato D., Conti A., Balestreri E., et al. Towards royal jelly proteome. Proteomics 2005, 5:769-776.
-
(2005)
Proteomics
, vol.5
, pp. 769-776
-
-
Scarselli, R.1
Donadio, E.2
Giuffrida, M.G.3
Fortunato, D.4
Conti, A.5
Balestreri, E.6
-
9
-
-
77954656892
-
Developing the wool proteome
-
Clerens S., Cornellison C.D., Deb-Choudhury S., Thomas A., Plowman J.E., Dyer J.M. Developing the wool proteome. J Proteomics 2010, 73:1722-1731.
-
(2010)
J Proteomics
, vol.73
, pp. 1722-1731
-
-
Clerens, S.1
Cornellison, C.D.2
Deb-Choudhury, S.3
Thomas, A.4
Plowman, J.E.5
Dyer, J.M.6
-
10
-
-
32544432232
-
Use of a proteomics approach to identify favourable conditions for production of good quality lambskin leather
-
Choudhury S.D., Allsop T., Passman A., Norris G.E. Use of a proteomics approach to identify favourable conditions for production of good quality lambskin leather. Anal Bioanal Chem 2006, 384:723-735.
-
(2006)
Anal Bioanal Chem
, vol.384
, pp. 723-735
-
-
Choudhury, S.D.1
Allsop, T.2
Passman, A.3
Norris, G.E.4
-
11
-
-
79952198746
-
Proteomics to investigate fertility in bulls
-
Gaviraghi A., Deriu F., Soggiu A., Galli A., Bonacina C., Bonizzi L., et al. Proteomics to investigate fertility in bulls. Vet Res Commun 2010, 34(Suppl. 1):S33-S36.
-
(2010)
Vet Res Commun
, vol.34
, Issue.SUPPL. 1
-
-
Gaviraghi, A.1
Deriu, F.2
Soggiu, A.3
Galli, A.4
Bonacina, C.5
Bonizzi, L.6
-
12
-
-
77956181148
-
Enrichment of low-abundance proteins from bovine and porcine serum samples for proteomic studies
-
Marco-Ramell A., Bassols A. Enrichment of low-abundance proteins from bovine and porcine serum samples for proteomic studies. Res Vet Sci 2010, 89:340-343.
-
(2010)
Res Vet Sci
, vol.89
, pp. 340-343
-
-
Marco-Ramell, A.1
Bassols, A.2
-
13
-
-
78651514352
-
Farm animal proteomics-a review
-
Bendixen E., Danielsen M., Hollung K., Gianazza E., Miller I. Farm animal proteomics-a review. J Proteomics 2011, 74:282-293.
-
(2011)
J Proteomics
, vol.74
, pp. 282-293
-
-
Bendixen, E.1
Danielsen, M.2
Hollung, K.3
Gianazza, E.4
Miller, I.5
-
14
-
-
82955203410
-
Comprehensive chromatographic separations in proteomics
-
Donato P., Cacciola F., Mondello L., Dugo P. Comprehensive chromatographic separations in proteomics. J Chromatogr A 2011, 1218:8777-8790.
-
(2011)
J Chromatogr A
, vol.1218
, pp. 8777-8790
-
-
Donato, P.1
Cacciola, F.2
Mondello, L.3
Dugo, P.4
-
15
-
-
78650492407
-
2D electrophoresis-based expression proteomics: a microbiologist's perspective
-
Sá-Correia I., Teixeira M.C. 2D electrophoresis-based expression proteomics: a microbiologist's perspective. Expert Rev Proteomics 2010, 7:943-953.
-
(2010)
Expert Rev Proteomics
, vol.7
, pp. 943-953
-
-
Sá-Correia, I.1
Teixeira, M.C.2
-
16
-
-
0037338365
-
Proteomic analysis of post-translational modifications
-
Mann M., Jensen O.N. Proteomic analysis of post-translational modifications. Nat Biotechnol 2003, 21:255-261.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 255-261
-
-
Mann, M.1
Jensen, O.N.2
-
17
-
-
79959465643
-
Mass spectrometry in the postgenomic era
-
Chait B.T. Mass spectrometry in the postgenomic era. Annu Rev Biochem 2011, 80:239-246.
-
(2011)
Annu Rev Biochem
, vol.80
, pp. 239-246
-
-
Chait, B.T.1
-
19
-
-
71549114829
-
Advances in preparation of biological extracts for protein purification
-
Grabski A.C. Advances in preparation of biological extracts for protein purification. Methods Enzymol 2009, 463:285-303.
-
(2009)
Methods Enzymol
, vol.463
, pp. 285-303
-
-
Grabski, A.C.1
-
20
-
-
32344432397
-
Pre-extraction sample handling by automated frozen disruption significantly improves subsequent proteomic analyses
-
Butt R.H., Coorssen J.R. Pre-extraction sample handling by automated frozen disruption significantly improves subsequent proteomic analyses. J Proteome Res 2006, 5:437-448.
-
(2006)
J Proteome Res
, vol.5
, pp. 437-448
-
-
Butt, R.H.1
Coorssen, J.R.2
-
21
-
-
43149095270
-
Exploring the chicken egg white proteome with combinatorial peptide ligand libraries
-
D'Ambrosio C., Arena S., Scaloni A., Guerrier L., Boschetti E., Mendieta M.E., et al. Exploring the chicken egg white proteome with combinatorial peptide ligand libraries. J Proteome Res 2008, 7:3461-3474.
-
(2008)
J Proteome Res
, vol.7
, pp. 3461-3474
-
-
D'Ambrosio, C.1
Arena, S.2
Scaloni, A.3
Guerrier, L.4
Boschetti, E.5
Mendieta, M.E.6
-
22
-
-
58949100303
-
Chicken egg yolk cytoplasmic proteome, mined via combinatorial peptide ligand libraries
-
Farinazzo A., Restuccia U., Bachi A., Guerrier L., Fortis F., Boschetti E., et al. Chicken egg yolk cytoplasmic proteome, mined via combinatorial peptide ligand libraries. J Chromatogr A 2009, 1216:1241-1252.
-
(2009)
J Chromatogr A
, vol.1216
, pp. 1241-1252
-
-
Farinazzo, A.1
Restuccia, U.2
Bachi, A.3
Guerrier, L.4
Fortis, F.5
Boschetti, E.6
-
23
-
-
35348963096
-
The chicken egg white proteome
-
Mann K. The chicken egg white proteome. Proteomics 2007, 7:3558-3568.
-
(2007)
Proteomics
, vol.7
, pp. 3558-3568
-
-
Mann, K.1
-
24
-
-
38149103492
-
The chicken egg yolk plasma and granule proteomes
-
Mann K., Mann M. The chicken egg yolk plasma and granule proteomes. Proteomics 2008, 8:178-191.
-
(2008)
Proteomics
, vol.8
, pp. 178-191
-
-
Mann, K.1
Mann, M.2
-
25
-
-
79551474552
-
Protein and peptide fractionation, enrichment and depletion: tools for the complex proteome
-
Ly L., Wasinger V.C. Protein and peptide fractionation, enrichment and depletion: tools for the complex proteome. Proteomics 2011, 11:513-534.
-
(2011)
Proteomics
, vol.11
, pp. 513-534
-
-
Ly, L.1
Wasinger, V.C.2
-
26
-
-
84555178070
-
Liquid-phase-based separation systems for depletion, prefractionation and enrichment of proteins in biological fluids and matrices for in-depth proteomics analysis - an update covering the period 2008-2011
-
Selvaraju S., El Rassi Z. Liquid-phase-based separation systems for depletion, prefractionation and enrichment of proteins in biological fluids and matrices for in-depth proteomics analysis - an update covering the period 2008-2011. Electrophoresis 2012, 33:74-88.
-
(2012)
Electrophoresis
, vol.33
, pp. 74-88
-
-
Selvaraju, S.1
El Rassi, Z.2
-
27
-
-
79251635924
-
Quantitative proteomics: assessing the spectrum of in-gel protein detection methods
-
Gauci V.J., Wright E.P., Coorssen J.R. Quantitative proteomics: assessing the spectrum of in-gel protein detection methods. J Chem Biol 2011, 4:3-29.
-
(2011)
J Chem Biol
, vol.4
, pp. 3-29
-
-
Gauci, V.J.1
Wright, E.P.2
Coorssen, J.R.3
-
28
-
-
79951847236
-
Linking the proteins-elucidation of proteome-scale networks using mass spectrometry
-
Pflieger D., Gonnet F., de la Fuente van Bentem S., Hirt H., de la Fuente A. Linking the proteins-elucidation of proteome-scale networks using mass spectrometry. Mass Spectrom Rev 2011, 30:268-297.
-
(2011)
Mass Spectrom Rev
, vol.30
, pp. 268-297
-
-
Pflieger, D.1
Gonnet, F.2
de la Fuente van Bentem, S.3
Hirt, H.4
de la Fuente, A.5
-
29
-
-
70350247861
-
Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques
-
Zhao Y., Jensen O.N. Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques. Proteomics 2009, 9:4632-4641.
-
(2009)
Proteomics
, vol.9
, pp. 4632-4641
-
-
Zhao, Y.1
Jensen, O.N.2
-
30
-
-
84857656021
-
Finding the right balance - a personal journey from individual proteins to membrane embedded motors
-
Robinson C.V. Finding the right balance - a personal journey from individual proteins to membrane embedded motors. FEBS J 2012, 279:663-677.
-
(2012)
FEBS J
, vol.279
, pp. 663-677
-
-
Robinson, C.V.1
-
31
-
-
40549116289
-
Optimizing the difference gel electrophoresis (DIGE) technology
-
Friedman D.B., Lilley K.S. Optimizing the difference gel electrophoresis (DIGE) technology. Methods Mol Biol 2008, 428:93-124.
-
(2008)
Methods Mol Biol
, vol.428
, pp. 93-124
-
-
Friedman, D.B.1
Lilley, K.S.2
-
32
-
-
57649153125
-
Difference gel electrophoresis
-
Timms J.F., Cramer R. Difference gel electrophoresis. Proteomics 2008, 8:4886-4897.
-
(2008)
Proteomics
, vol.8
, pp. 4886-4897
-
-
Timms, J.F.1
Cramer, R.2
-
33
-
-
79959264518
-
Analytical aspects of proteomics: 2009-2010
-
Ning Z., Zhou H., Wang F., Abu-Farha M., Figeys D. Analytical aspects of proteomics: 2009-2010. Anal Chem 2011, 83:4407-4426.
-
(2011)
Anal Chem
, vol.83
, pp. 4407-4426
-
-
Ning, Z.1
Zhou, H.2
Wang, F.3
Abu-Farha, M.4
Figeys, D.5
-
35
-
-
79959241187
-
Proteomic analysis of pork meat in the production of cooked ham
-
Pioselli B., Paredi G., Mozzarelli A. Proteomic analysis of pork meat in the production of cooked ham. Mol Biosyst 2011, 7:2252-2260.
-
(2011)
Mol Biosyst
, vol.7
, pp. 2252-2260
-
-
Pioselli, B.1
Paredi, G.2
Mozzarelli, A.3
-
36
-
-
79959765265
-
Using 2-DE for the differentiation of local chicken breeds
-
Zanetti E., Molette C., Chambon C., Pinguet J., Rémignon H., Cassandro M. Using 2-DE for the differentiation of local chicken breeds. Proteomics 2011, 11:2613-2619.
-
(2011)
Proteomics
, vol.11
, pp. 2613-2619
-
-
Zanetti, E.1
Molette, C.2
Chambon, C.3
Pinguet, J.4
Rémignon, H.5
Cassandro, M.6
-
37
-
-
77952503261
-
MALDI-in source decay applied to mass spectrometry imaging: a new tool for protein identification
-
Debois D., Bertrand V., Quinton L., De Pauw-Gillet M.-C., De Pauw E. MALDI-in source decay applied to mass spectrometry imaging: a new tool for protein identification. Anal Chem 2010, 82:4036-4045.
-
(2010)
Anal Chem
, vol.82
, pp. 4036-4045
-
-
Debois, D.1
Bertrand, V.2
Quinton, L.3
De Pauw-Gillet, M.-C.4
De Pauw, E.5
-
38
-
-
79960431406
-
Imaging of intact tissue sections: moving beyond the microscope
-
Seeley E.H., Schwamborn K., Caprioli R.M. Imaging of intact tissue sections: moving beyond the microscope. J Biol Chem 2011, 286:25459-25466.
-
(2011)
J Biol Chem
, vol.286
, pp. 25459-25466
-
-
Seeley, E.H.1
Schwamborn, K.2
Caprioli, R.M.3
-
39
-
-
67651173106
-
Proteomics by mass spectrometry: approaches, advances, and applications
-
Yates J.R., Ruse C.I., Nakorchevsky A. Proteomics by mass spectrometry: approaches, advances, and applications. Annu Rev Biomed Eng 2009, 11:49-79.
-
(2009)
Annu Rev Biomed Eng
, vol.11
, pp. 49-79
-
-
Yates, J.R.1
Ruse, C.I.2
Nakorchevsky, A.3
-
41
-
-
30644469415
-
Molecular weight determination of peptides and proteins by ESI and MALDI
-
Strupat K. Molecular weight determination of peptides and proteins by ESI and MALDI. Methods Enzymol 2005, 405:1-36.
-
(2005)
Methods Enzymol
, vol.405
, pp. 1-36
-
-
Strupat, K.1
-
42
-
-
0442276567
-
Under non-denaturing solvent conditions, the mean charge state of a multiply charged protein ion formed by electrospray is linearly correlated with the macromolecular surface
-
Hautreux M., Hue N., Du Fou de Kerdaniel A., Zahir A., Malec V., Laprévote O. Under non-denaturing solvent conditions, the mean charge state of a multiply charged protein ion formed by electrospray is linearly correlated with the macromolecular surface. Int J Mass Spectrom 2004, 231:131-137.
-
(2004)
Int J Mass Spectrom
, vol.231
, pp. 131-137
-
-
Hautreux, M.1
Hue, N.2
Du Fou de Kerdaniel, A.3
Zahir, A.4
Malec, V.5
Laprévote, O.6
-
43
-
-
0141669841
-
Mean charge state and charge state distribution of proteins as structural probes. An electrospray ionisation mass spectrometry study of lysozyme and ribonuclease A
-
Halgand F., Laprévote O. Mean charge state and charge state distribution of proteins as structural probes. An electrospray ionisation mass spectrometry study of lysozyme and ribonuclease A. Eur J Mass Spectrom 2001, 7:433.
-
(2001)
Eur J Mass Spectrom
, vol.7
, pp. 433
-
-
Halgand, F.1
Laprévote, O.2
-
44
-
-
0036302007
-
Peptide and protein analysis with mass spectrometry
-
Trauger S.A., Webb W., Siuzdak G. Peptide and protein analysis with mass spectrometry. Spectrosc Int J 2002, 16:15-28.
-
(2002)
Spectrosc Int J
, vol.16
, pp. 15-28
-
-
Trauger, S.A.1
Webb, W.2
Siuzdak, G.3
-
47
-
-
84990652333
-
Metastable decay of peptides and proteins in matrix-assisted laser-desorption mass spectrometry
-
Spengler B., Kirsch D., Kaufmann R. Metastable decay of peptides and proteins in matrix-assisted laser-desorption mass spectrometry. Rapid Commun Mass Spectrom 1991, 5:198-202.
-
(1991)
Rapid Commun Mass Spectrom
, vol.5
, pp. 198-202
-
-
Spengler, B.1
Kirsch, D.2
Kaufmann, R.3
-
48
-
-
65649151144
-
Electrospray ionisation mass spectrometry: principles and clinical applications
-
Australian Association of Clinical Biochemists
-
Ho C.S., Lam C.W.K., Chan M.H.M., Cheung R.C.K., Law L.K., Lit L.C.W., et al. Electrospray ionisation mass spectrometry: principles and clinical applications. The Clinical Biochemist Reviews 2003, 24:3-12. Australian Association of Clinical Biochemists.
-
(2003)
The Clinical Biochemist Reviews
, vol.24
, pp. 3-12
-
-
Ho, C.S.1
Lam, C.W.K.2
Chan, M.H.M.3
Cheung, R.C.K.4
Law, L.K.5
Lit, L.C.W.6
-
50
-
-
1242351309
-
Electron-capture dissociation tandem mass spectrometry
-
Zubarev R.A. Electron-capture dissociation tandem mass spectrometry. Curr Opin Biotechnol 2004, 15:12-16.
-
(2004)
Curr Opin Biotechnol
, vol.15
, pp. 12-16
-
-
Zubarev, R.A.1
-
51
-
-
33845435463
-
The utility of ETD mass spectrometry in proteomic analysis
-
Mikesh L.M., Ueberheide B., Chi A., Coon J.J., Syka J.E.P., Shabanowitz J., et al. The utility of ETD mass spectrometry in proteomic analysis. Biochim Biophys Acta 2006, 1764:1811-1822.
-
(2006)
Biochim Biophys Acta
, vol.1764
, pp. 1811-1822
-
-
Mikesh, L.M.1
Ueberheide, B.2
Chi, A.3
Coon, J.J.4
Syka, J.E.P.5
Shabanowitz, J.6
-
52
-
-
77958159767
-
New advances in the understanding of the in-source decay fragmentation of peptides in MALDI-TOF-MS
-
Demeure K., Gabelica V., De Pauw E.A. New advances in the understanding of the in-source decay fragmentation of peptides in MALDI-TOF-MS. J Am Soc Mass Spectrom 2010, 21:1906-1917.
-
(2010)
J Am Soc Mass Spectrom
, vol.21
, pp. 1906-1917
-
-
Demeure, K.1
Gabelica, V.2
De Pauw, E.A.3
-
53
-
-
84862933288
-
Advancements in top-down proteomics
-
Zhou H., Ning Z., Starr A., Abu-Farha M., Figeys D. Advancements in top-down proteomics. Anal Chem 2012, 84:720-734.
-
(2012)
Anal Chem
, vol.84
, pp. 720-734
-
-
Zhou, H.1
Ning, Z.2
Starr, A.3
Abu-Farha, M.4
Figeys, D.5
-
54
-
-
79960258556
-
100% protein sequence coverage: a modern form of surrealism in proteomics
-
Meyer B., Papasotiriou D.G., Karas M. 100% protein sequence coverage: a modern form of surrealism in proteomics. Amino Acids 2011, 41:291-310.
-
(2011)
Amino Acids
, vol.41
, pp. 291-310
-
-
Meyer, B.1
Papasotiriou, D.G.2
Karas, M.3
-
55
-
-
79961185259
-
Ion mobility mass spectrometry for peptide analysis
-
Harvey S.R., Macphee C.E., Barran P.E. Ion mobility mass spectrometry for peptide analysis. Methods 2011, 54:454-461.
-
(2011)
Methods
, vol.54
, pp. 454-461
-
-
Harvey, S.R.1
Macphee, C.E.2
Barran, P.E.3
-
57
-
-
75549089630
-
The 2010 nucleic acids research database issue and online database collection: a community of data resources
-
Cochrane G.R., Galperin M.Y. The 2010 nucleic acids research database issue and online database collection: a community of data resources. Nucleic Acids Res 2010, 38:D1-D4.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Cochrane, G.R.1
Galperin, M.Y.2
-
58
-
-
80052033624
-
Protein identification using MS/MS data
-
Cottrell J.S. Protein identification using MS/MS data. J Proteomics 2011, 74:1842-1851.
-
(2011)
J Proteomics
, vol.74
, pp. 1842-1851
-
-
Cottrell, J.S.1
-
59
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
60
-
-
48449090786
-
NCBI BLAST: a better web interface
-
Johnson M., Zaretskaya I., Raytselis Y., Merezhuk Y., McGinnis S., Madden T.L. NCBI BLAST: a better web interface. Nucleic Acids Res 2008, 36:W5-W9.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Johnson, M.1
Zaretskaya, I.2
Raytselis, Y.3
Merezhuk, Y.4
McGinnis, S.5
Madden, T.L.6
-
61
-
-
78650309656
-
Utility, limitations, and promise of proteomics in animal science
-
Lippolis J.D., Reinhardt T.A. Utility, limitations, and promise of proteomics in animal science. Vet Immunol Immunopathol 2010, 138:241-251.
-
(2010)
Vet Immunol Immunopathol
, vol.138
, pp. 241-251
-
-
Lippolis, J.D.1
Reinhardt, T.A.2
-
62
-
-
40149108658
-
Computational methods for protein identification from mass spectrometry data
-
McHugh L., Arthur J.W. Computational methods for protein identification from mass spectrometry data. PLoS Comput Biol 2008, 4:e12.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
McHugh, L.1
Arthur, J.W.2
-
63
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using mass spectrometry data
-
Perkins D.N., Pappin D.J., Creasy D.M., Cottrell J.S. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 1999, 20:3551-3567.
-
(1999)
Electrophoresis
, vol.20
, pp. 3551-3567
-
-
Perkins, D.N.1
Pappin, D.J.2
Creasy, D.M.3
Cottrell, J.S.4
-
64
-
-
80555146717
-
A face in the crowd: recognizing peptides through database search
-
[R111.009522]
-
Eng J.K., Searle B.C., Clauser K.R., Tabb D.L. A face in the crowd: recognizing peptides through database search. Mol Cell Proteomics 2011, 10. [R111.009522].
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Eng, J.K.1
Searle, B.C.2
Clauser, K.R.3
Tabb, D.L.4
-
65
-
-
84872426605
-
Tandem mass spectrometry of peptides
-
In Tech Publishers
-
Soares R., Pires E., Almeida A.M., Santos R., Gomes R., Koči K., Franco C.F., Coelho A.V. Tandem mass spectrometry of peptides. Applications of tandem mass spectrometry-its principles and applications 2012, In Tech Publishers.
-
(2012)
Applications of tandem mass spectrometry-its principles and applications
-
-
Soares, R.1
Pires, E.2
Almeida, A.M.3
Santos, R.4
Gomes, R.5
Koči, K.6
Franco, C.F.7
Coelho, A.V.8
-
66
-
-
77953155288
-
Template proteogenomics: sequencing whole proteins using an imperfect database
-
Castellana N.E., Pham V., Arnott D., Lill J.R., Bafna V. Template proteogenomics: sequencing whole proteins using an imperfect database. Mol Cell Proteomics 2010, 9:1260-1270.
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 1260-1270
-
-
Castellana, N.E.1
Pham, V.2
Arnott, D.3
Lill, J.R.4
Bafna, V.5
-
67
-
-
79953054035
-
Exploring the proteome of an echinoderm nervous system: 2-DE of the sea star radial nerve cord and the synaptosomal membranes subproteome
-
Franco C.F., Santos R., Coelho A.V. Exploring the proteome of an echinoderm nervous system: 2-DE of the sea star radial nerve cord and the synaptosomal membranes subproteome. Proteomics 2011, 11:1359-1364.
-
(2011)
Proteomics
, vol.11
, pp. 1359-1364
-
-
Franco, C.F.1
Santos, R.2
Coelho, A.V.3
-
68
-
-
78649908934
-
Differential protein expression in two bivalve species; Mytilus galloprovincialis and Corbicula fluminea; exposed to Cylindrospermopsis raciborskii cells
-
Puerto M., Campos A., Prieto A., Cameán A., de Almeida A.M., Coelho A.V., et al. Differential protein expression in two bivalve species; Mytilus galloprovincialis and Corbicula fluminea; exposed to Cylindrospermopsis raciborskii cells. Aquat Toxicol 2011, 101:109-116.
-
(2011)
Aquat Toxicol
, vol.101
, pp. 109-116
-
-
Puerto, M.1
Campos, A.2
Prieto, A.3
Cameán, A.4
de Almeida, A.M.5
Coelho, A.V.6
-
69
-
-
77956877617
-
Subunit composition of Rhodothermus marinus respiratory complex I
-
Batista A.P., Franco C., Mendes M., Coelho A.V., Pereira M.M. Subunit composition of Rhodothermus marinus respiratory complex I. Anal Biochem 2010, 407:104-110.
-
(2010)
Anal Biochem
, vol.407
, pp. 104-110
-
-
Batista, A.P.1
Franco, C.2
Mendes, M.3
Coelho, A.V.4
Pereira, M.M.5
-
70
-
-
48849097490
-
Protein identification pipeline for the homology-driven proteomics
-
Junqueira M., Spirin V., Balbuena T.S., Thomas H., Adzhubei I., Sunyaev S., et al. Protein identification pipeline for the homology-driven proteomics. J Proteomics 2008, 71:346-356.
-
(2008)
J Proteomics
, vol.71
, pp. 346-356
-
-
Junqueira, M.1
Spirin, V.2
Balbuena, T.S.3
Thomas, H.4
Adzhubei, I.5
Sunyaev, S.6
-
72
-
-
34547153650
-
Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing
-
Waridel P., Frank A., Thomas H., Surendranath V., Sunyaev S., Pevzner P., et al. Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing. Proteomics 2007, 7:2318-2329.
-
(2007)
Proteomics
, vol.7
, pp. 2318-2329
-
-
Waridel, P.1
Frank, A.2
Thomas, H.3
Surendranath, V.4
Sunyaev, S.5
Pevzner, P.6
-
73
-
-
0001092477
-
Nanoelectrospray tandem mass spectrometry and sequence similarity searching for identification of proteins from organisms with unknown genomes
-
Shevchenko A., Sunyaev S., Liska A., Bork P., Shevchenko A. Nanoelectrospray tandem mass spectrometry and sequence similarity searching for identification of proteins from organisms with unknown genomes. Methods Mol Biol 2003, 211:221-234.
-
(2003)
Methods Mol Biol
, vol.211
, pp. 221-234
-
-
Shevchenko, A.1
Sunyaev, S.2
Liska, A.3
Bork, P.4
Shevchenko, A.5
-
74
-
-
0037253223
-
Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications
-
Liska A.J., Shevchenko A. Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications. Proteomics 2003, 3:19-28.
-
(2003)
Proteomics
, vol.3
, pp. 19-28
-
-
Liska, A.J.1
Shevchenko, A.2
-
75
-
-
0029644596
-
Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database
-
Yates J.R., Eng J.K., McCormack A.L., Schieltz D. Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database. Anal Chem 1995, 67:1426-1436.
-
(1995)
Anal Chem
, vol.67
, pp. 1426-1436
-
-
Yates, J.R.1
Eng, J.K.2
McCormack, A.L.3
Schieltz, D.4
-
76
-
-
3142702204
-
TANDEM: matching proteins with tandem mass spectra
-
Craig R., Beavis R.C. TANDEM: matching proteins with tandem mass spectra. Bioinformatics 2004, 20:1466-1467.
-
(2004)
Bioinformatics
, vol.20
, pp. 1466-1467
-
-
Craig, R.1
Beavis, R.C.2
-
77
-
-
7044246160
-
Open mass spectrometry search algorithm
-
Geer L.Y., Markey S.P., Kowalak J.A., Wagner L., Xu M., Maynard D.M., et al. Open mass spectrometry search algorithm. J Proteome Res 2004, 3:958-964.
-
(2004)
J Proteome Res
, vol.3
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
Maynard, D.M.6
-
78
-
-
24044491542
-
Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and
-
Chalkley R.J., Baker P.R., Huang L., Hansen K.C., Allen N.P., Rexach M., et al. Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and. Mol Cell Proteomics 2005, 4:1194-1204.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 1194-1204
-
-
Chalkley, R.J.1
Baker, P.R.2
Huang, L.3
Hansen, K.C.4
Allen, N.P.5
Rexach, M.6
-
79
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox J., Mann M. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol 2008, 26:1367-1372.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
80
-
-
79953701087
-
Andromeda: a peptide search engine integrated into the MaxQuant environment
-
Cox J., Neuhauser N., Michalski A., Scheltema R.A., Olsen J.V., Mann M. Andromeda: a peptide search engine integrated into the MaxQuant environment. J Proteome Res 2011, 10:1794-1805.
-
(2011)
J Proteome Res
, vol.10
, pp. 1794-1805
-
-
Cox, J.1
Neuhauser, N.2
Michalski, A.3
Scheltema, R.A.4
Olsen, J.V.5
Mann, M.6
-
81
-
-
78650147228
-
The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search
-
Kim S., Mischerikow N., Bandeira N., Navarro J.D., Wich L., Mohammed S., et al. The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search. Mol Cell Proteomics 2010, 9:2840-2852.
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 2840-2852
-
-
Kim, S.1
Mischerikow, N.2
Bandeira, N.3
Navarro, J.D.4
Wich, L.5
Mohammed, S.6
-
82
-
-
34848889259
-
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
Shilov I.V., Seymour S.L., Patel A.A., Loboda A., Tang W.H., Keating S.P., et al. The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol Cell Proteomics 2007, 6:1638-1655.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
-
83
-
-
0037725335
-
Combining mass spectrometry with database interrogation strategies in proteomics
-
Liska A.J., Shevchenko A. Combining mass spectrometry with database interrogation strategies in proteomics. TrAC, Trends Anal Chem 2003, 22:291-298.
-
(2003)
TrAC, Trends Anal Chem
, vol.22
, pp. 291-298
-
-
Liska, A.J.1
Shevchenko, A.2
-
84
-
-
0028575316
-
Error-tolerant identification of peptides in sequence databases by peptide sequence tags
-
Mann M., Wilm M. Error-tolerant identification of peptides in sequence databases by peptide sequence tags. Anal Chem 1994, 66:4390-4399.
-
(1994)
Anal Chem
, vol.66
, pp. 4390-4399
-
-
Mann, M.1
Wilm, M.2
-
85
-
-
0030959279
-
Sequence database searches via de novo peptide sequencing by tandem mass spectrometry
-
Taylor J.A., Johnson R.S. Sequence database searches via de novo peptide sequencing by tandem mass spectrometry. Rapid Commun Mass Spectrom 1997, 11:1067-1075.
-
(1997)
Rapid Commun Mass Spectrom
, vol.11
, pp. 1067-1075
-
-
Taylor, J.A.1
Johnson, R.S.2
-
86
-
-
0035958869
-
Functional assignment of the 20 S proteasome from Trypanosoma brucei using mass spectrometry and new bioinformatics approaches
-
Huang L., Jacob R.J., Pegg S.C., Baldwin M.A., Wang C.C., Burlingame A.L., et al. Functional assignment of the 20 S proteasome from Trypanosoma brucei using mass spectrometry and new bioinformatics approaches. J Biol Chem 2001, 276:28327-28339.
-
(2001)
J Biol Chem
, vol.276
, pp. 28327-28339
-
-
Huang, L.1
Jacob, R.J.2
Pegg, S.C.3
Baldwin, M.A.4
Wang, C.C.5
Burlingame, A.L.6
-
87
-
-
0035326344
-
Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching
-
Shevchenko A., Sunyaev S., Loboda A., Bork P., Ens W., Standing K.G. Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching. Anal Chem 2001, 73:1917-1926.
-
(2001)
Anal Chem
, vol.73
, pp. 1917-1926
-
-
Shevchenko, A.1
Sunyaev, S.2
Loboda, A.3
Bork, P.4
Ens, W.5
Standing, K.G.6
-
88
-
-
0036463587
-
Getting more from less: algorithms for rapid protein identification with multiple short peptide sequences
-
Mackey A.J., Haystead T.A.J., Pearson W.R. Getting more from less: algorithms for rapid protein identification with multiple short peptide sequences. Mol Cell Proteomics 2002, 1:139-147.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 139-147
-
-
Mackey, A.J.1
Haystead, T.A.J.2
Pearson, W.R.3
-
89
-
-
1942423061
-
High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results
-
Searle B.C., Dasari S., Turner M., Reddy A.P., Choi D., Wilmarth P.A., et al. High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results. Anal Chem 2004, 76:2220-2230.
-
(2004)
Anal Chem
, vol.76
, pp. 2220-2230
-
-
Searle, B.C.1
Dasari, S.2
Turner, M.3
Reddy, A.P.4
Choi, D.5
Wilmarth, P.A.6
-
90
-
-
37049006551
-
A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments
-
Grossmann J., Fischer B., Baerenfaller K., Owiti J., Buhmann J.M., Gruissem W., et al. A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments. Proteomics 2007, 7:4245-4254.
-
(2007)
Proteomics
, vol.7
, pp. 4245-4254
-
-
Grossmann, J.1
Fischer, B.2
Baerenfaller, K.3
Owiti, J.4
Buhmann, J.M.5
Gruissem, W.6
-
91
-
-
2642523613
-
The power and the limitations of cross-species protein identification by mass spectrometry-driven sequence similarity searches
-
Habermann B., Oegema J., Sunyaev S., Shevchenko A. The power and the limitations of cross-species protein identification by mass spectrometry-driven sequence similarity searches. Mol Cell Proteomics 2004, 3:238-249.
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 238-249
-
-
Habermann, B.1
Oegema, J.2
Sunyaev, S.3
Shevchenko, A.4
-
92
-
-
0141989734
-
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
-
Ma B., Zhang K., Hendrie C., Liang C., Li M., Doherty-Kirby A., et al. PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry. Rapid Commun Mass Spectrom 2003, 17:2337-2342.
-
(2003)
Rapid Commun Mass Spectrom
, vol.17
, pp. 2337-2342
-
-
Ma, B.1
Zhang, K.2
Hendrie, C.3
Liang, C.4
Li, M.5
Doherty-Kirby, A.6
-
93
-
-
13844319908
-
PepNovo: de novo peptide sequencing via probabilistic network modeling
-
Frank A., Pevzner P. PepNovo: de novo peptide sequencing via probabilistic network modeling. Anal Chem 2005, 77:964-973.
-
(2005)
Anal Chem
, vol.77
, pp. 964-973
-
-
Frank, A.1
Pevzner, P.2
-
94
-
-
27944456862
-
NovoHMM: a hidden Markov model for de novo peptide sequencing
-
Fischer B., Roth V., Roos F., Grossmann J., Baginsky S., Widmayer P., et al. NovoHMM: a hidden Markov model for de novo peptide sequencing. Anal Chem 2005, 77:7265-7273.
-
(2005)
Anal Chem
, vol.77
, pp. 7265-7273
-
-
Fischer, B.1
Roth, V.2
Roos, F.3
Grossmann, J.4
Baginsky, S.5
Widmayer, P.6
-
95
-
-
70449517481
-
First insights into the biochemistry of tube foot adhesive from the sea urchin Paracentrotus lividus (Echinoidea, Echinodermata)
-
Santos R., da Costa G., Franco C., Gomes-Alves P., Flammang P., Coelho A.V. First insights into the biochemistry of tube foot adhesive from the sea urchin Paracentrotus lividus (Echinoidea, Echinodermata). Mar Biotechnol (NY) 2009, 11:686-698.
-
(2009)
Mar Biotechnol (NY)
, vol.11
, pp. 686-698
-
-
Santos, R.1
da Costa, G.2
Franco, C.3
Gomes-Alves, P.4
Flammang, P.5
Coelho, A.V.6
-
96
-
-
77149128956
-
De novo sequencing of peptides by MS/MS
-
Seidler J., Zinn N., Boehm M.E., Lehmann W.D. De novo sequencing of peptides by MS/MS. Proteomics 2010, 10:634-649.
-
(2010)
Proteomics
, vol.10
, pp. 634-649
-
-
Seidler, J.1
Zinn, N.2
Boehm, M.E.3
Lehmann, W.D.4
-
97
-
-
0037387168
-
Proteins from bovine tissues and biological fluids: defining a reference electrophoresis map for liver, kidney, muscle, plasma and red blood cells
-
Talamo F., D'Ambrosio C., Arena S., Del Vecchio P., Ledda L., Zehender G., et al. Proteins from bovine tissues and biological fluids: defining a reference electrophoresis map for liver, kidney, muscle, plasma and red blood cells. Proteomics 2003, 3:440-460.
-
(2003)
Proteomics
, vol.3
, pp. 440-460
-
-
Talamo, F.1
D'Ambrosio, C.2
Arena, S.3
Del Vecchio, P.4
Ledda, L.5
Zehender, G.6
-
98
-
-
2942529230
-
Mapping of bovine skeletal muscle proteins using two-dimensional gel electrophoresis and mass spectrometry
-
Bouley J., Chambon C., Picard B. Mapping of bovine skeletal muscle proteins using two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2004, 4:1811-1824.
-
(2004)
Proteomics
, vol.4
, pp. 1811-1824
-
-
Bouley, J.1
Chambon, C.2
Picard, B.3
-
99
-
-
33646233433
-
Mapping of alkaline proteins in bovine skeletal muscle
-
Chaze T., Bouley J., Chambon C., Barboiron C., Picard B. Mapping of alkaline proteins in bovine skeletal muscle. Proteomics 2006, 6:2571-2575.
-
(2006)
Proteomics
, vol.6
, pp. 2571-2575
-
-
Chaze, T.1
Bouley, J.2
Chambon, C.3
Barboiron, C.4
Picard, B.5
-
100
-
-
67650429974
-
Establishment of a proteomic reference map for the gastrocnemius muscle in the rabbit (Oryctolagus cuniculus)
-
Almeida A.M., Campos A., van Harten S., Cardoso L.A., Coelho A.V. Establishment of a proteomic reference map for the gastrocnemius muscle in the rabbit (Oryctolagus cuniculus). Res Vet Sci 2009, 87:196-199.
-
(2009)
Res Vet Sci
, vol.87
, pp. 196-199
-
-
Almeida, A.M.1
Campos, A.2
van Harten, S.3
Cardoso, L.A.4
Coelho, A.V.5
-
101
-
-
13844310828
-
Proteomic analysis of bovine skeletal muscle hypertrophy
-
Bouley J., Meunier B., Chambon C., De Smet S., Hocquette J.F., Picard B. Proteomic analysis of bovine skeletal muscle hypertrophy. Proteomics 2005, 5:490-500.
-
(2005)
Proteomics
, vol.5
, pp. 490-500
-
-
Bouley, J.1
Meunier, B.2
Chambon, C.3
De Smet, S.4
Hocquette, J.F.5
Picard, B.6
-
102
-
-
33845273821
-
Proteomic analysis of ovine muscle hypertrophy
-
Hamelin M., Sayd T., Chambon C., Bouix J., Bibé B., Milenkovic D., et al. Proteomic analysis of ovine muscle hypertrophy. J Anim Sci 2006, 84:3266-3276.
-
(2006)
J Anim Sci
, vol.84
, pp. 3266-3276
-
-
Hamelin, M.1
Sayd, T.2
Chambon, C.3
Bouix, J.4
Bibé, B.5
Milenkovic, D.6
-
103
-
-
77952053019
-
Proteomic investigation of the effects of weight loss in the gastrocnemius muscle of wild and NZW rabbits via 2D-electrophoresis and MALDI-TOF MS
-
Almeida A.M., Campos A., Francisco R., van Harten S., Cardoso L.A., Coelho A.V. Proteomic investigation of the effects of weight loss in the gastrocnemius muscle of wild and NZW rabbits via 2D-electrophoresis and MALDI-TOF MS. Anim Genet 2010, 41:260-272.
-
(2010)
Anim Genet
, vol.41
, pp. 260-272
-
-
Almeida, A.M.1
Campos, A.2
Francisco, R.3
van Harten, S.4
Cardoso, L.A.5
Coelho, A.V.6
-
104
-
-
84755161198
-
Differentially expressed proteins during fat accumulation in bovine skeletal muscle
-
Zhang Q., Lee H.-G., Han J.-A., Kim E.B., Kang S.K., Yin J., et al. Differentially expressed proteins during fat accumulation in bovine skeletal muscle. Meat Sci 2010, 86:814-820.
-
(2010)
Meat Sci
, vol.86
, pp. 814-820
-
-
Zhang, Q.1
Lee, H.-G.2
Han, J.-A.3
Kim, E.B.4
Kang, S.K.5
Yin, J.6
-
105
-
-
79958714052
-
Proteome changes in the insoluble protein fraction of bovine Longissimus dorsi muscle as a result of low-voltage electrical stimulation
-
Bjarnadóttir S.G., Hollung K., Høy M., Veiseth-Kent E. Proteome changes in the insoluble protein fraction of bovine Longissimus dorsi muscle as a result of low-voltage electrical stimulation. Meat Sci 2011, 89:143-149.
-
(2011)
Meat Sci
, vol.89
, pp. 143-149
-
-
Bjarnadóttir, S.G.1
Hollung, K.2
Høy, M.3
Veiseth-Kent, E.4
-
106
-
-
82355192275
-
Meat quality of the longissimus lumborum muscle of Casertana and Large White pigs: metabolomics and proteomics intertwined
-
D'Alessandro A., Marrocco C., Zolla V., D'Andrea M., Zolla L. Meat quality of the longissimus lumborum muscle of Casertana and Large White pigs: metabolomics and proteomics intertwined. J Proteomics 2011, 75:610-627.
-
(2011)
J Proteomics
, vol.75
, pp. 610-627
-
-
D'Alessandro, A.1
Marrocco, C.2
Zolla, V.3
D'Andrea, M.4
Zolla, L.5
-
107
-
-
2642568030
-
The proteome of chicken skeletal muscle: changes in soluble protein expression during growth in a layer strain
-
Doherty M.K., McLean L., Hayter J.R., Pratt J.M., Robertson D.H.L., El-Shafei A., et al. The proteome of chicken skeletal muscle: changes in soluble protein expression during growth in a layer strain. Proteomics 2004, 4:2082-2093.
-
(2004)
Proteomics
, vol.4
, pp. 2082-2093
-
-
Doherty, M.K.1
McLean, L.2
Hayter, J.R.3
Pratt, J.M.4
Robertson, D.H.L.5
El-Shafei, A.6
-
108
-
-
54449089070
-
Genetic diversity in native and commercial breeds of pigs in Portugal assessed by microsatellites
-
Vicente A.A., Carolino M.I., Sousa M.C.O., Ginja C., Silva F.S., Martinez A.M., et al. Genetic diversity in native and commercial breeds of pigs in Portugal assessed by microsatellites. J Anim Sci 2008, 86:2496-2507.
-
(2008)
J Anim Sci
, vol.86
, pp. 2496-2507
-
-
Vicente, A.A.1
Carolino, M.I.2
Sousa, M.C.O.3
Ginja, C.4
Silva, F.S.5
Martinez, A.M.6
-
109
-
-
79251508372
-
Proteome analysis of whole and water-soluble proteins in masseter and semitendinosus muscles of Holstein cows
-
Oe M., Ohnishi-Kameyama M., Nakajima I., Muroya S., Shibata M., Ojima K., et al. Proteome analysis of whole and water-soluble proteins in masseter and semitendinosus muscles of Holstein cows. Anim Sci J 2011, 82:181-186.
-
(2011)
Anim Sci J
, vol.82
, pp. 181-186
-
-
Oe, M.1
Ohnishi-Kameyama, M.2
Nakajima, I.3
Muroya, S.4
Shibata, M.5
Ojima, K.6
-
110
-
-
77951620846
-
Allergenicity study of EGFP-transgenic chicken meat by serological and 2D-DIGE analysis
-
Nakamura R., Nakamura R., Nakano M., Arisawa K., Ezaki R., Horiuchi H., et al. Allergenicity study of EGFP-transgenic chicken meat by serological and 2D-DIGE analysis. Food Chem Toxicol 2010, 48:1302-1310.
-
(2010)
Food Chem Toxicol
, vol.48
, pp. 1302-1310
-
-
Nakamura, R.1
Nakamura, R.2
Nakano, M.3
Arisawa, K.4
Ezaki, R.5
Horiuchi, H.6
-
111
-
-
0344323592
-
Proteome analysis of intact proteins in complex mixtures
-
Hayter J.R., Robertson D.H.L., Gaskell S.J., Beynon R.J. Proteome analysis of intact proteins in complex mixtures. Mol Cell Proteomics 2003, 2:85-95.
-
(2003)
Mol Cell Proteomics
, vol.2
, pp. 85-95
-
-
Hayter, J.R.1
Robertson, D.H.L.2
Gaskell, S.J.3
Beynon, R.J.4
-
112
-
-
60549106873
-
Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies
-
Hornshøj H., Bendixen E., Conley L.N., Andersen P.K., Hedegaard J., Panitz F., et al. Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies. BMC Genomics 2009, 10:30.
-
(2009)
BMC Genomics
, vol.10
, pp. 30
-
-
Hornshøj, H.1
Bendixen, E.2
Conley, L.N.3
Andersen, P.K.4
Hedegaard, J.5
Panitz, F.6
-
113
-
-
74849108510
-
Proteomic signature of muscle atrophy in rainbow trout
-
Salem M., Kenney P.B., Rexroad C.E., Yao J. Proteomic signature of muscle atrophy in rainbow trout. J Proteomics 2010, 73:778-789.
-
(2010)
J Proteomics
, vol.73
, pp. 778-789
-
-
Salem, M.1
Kenney, P.B.2
Rexroad, C.E.3
Yao, J.4
-
114
-
-
84856599980
-
Proteome profile of the pipping muscle in broiler embryos
-
Sokale A., Peebles E.D., Zhai W., Pendarvis K., Burgess S., Pechan T. Proteome profile of the pipping muscle in broiler embryos. Proteomics 2011, 11:4262-4265.
-
(2011)
Proteomics
, vol.11
, pp. 4262-4265
-
-
Sokale, A.1
Peebles, E.D.2
Zhai, W.3
Pendarvis, K.4
Burgess, S.5
Pechan, T.6
-
115
-
-
77953637963
-
Proteome changes in bovine longissimus thoracis muscle during the first 48 h postmortem: shifts in energy status and myofibrillar stability
-
Bjarnadóttir S.G., Hollung K., Faergestad E.M., Veiseth-Kent E. Proteome changes in bovine longissimus thoracis muscle during the first 48 h postmortem: shifts in energy status and myofibrillar stability. J Agric Food Chem 2010, 58:7408-7414.
-
(2010)
J Agric Food Chem
, vol.58
, pp. 7408-7414
-
-
Bjarnadóttir, S.G.1
Hollung, K.2
Faergestad, E.M.3
Veiseth-Kent, E.4
-
116
-
-
79951774411
-
Centrifugal drip is an accessible source for protein indicators of pork ageing and water-holding capacity
-
Di Luca A., Mullen A.M., Elia G., Davey G., Hamill R.M. Centrifugal drip is an accessible source for protein indicators of pork ageing and water-holding capacity. Meat Sci 2011, 88:261-270.
-
(2011)
Meat Sci
, vol.88
, pp. 261-270
-
-
Di Luca, A.1
Mullen, A.M.2
Elia, G.3
Davey, G.4
Hamill, R.M.5
-
117
-
-
5644227330
-
The serum proteome of Equus caballus
-
Miller I., Friedlein A., Tsangaris G., Maris A., Fountoulakis M., Gemeiner M. The serum proteome of Equus caballus. Proteomics 2004, 4:3227-3234.
-
(2004)
Proteomics
, vol.4
, pp. 3227-3234
-
-
Miller, I.1
Friedlein, A.2
Tsangaris, G.3
Maris, A.4
Fountoulakis, M.5
Gemeiner, M.6
-
118
-
-
42049104081
-
Profiling the metabolic proteome of bovine mammary tissue
-
Beddek A.J., Rawson P., Peng L., Snell R., Lehnert K., Ward H.E., et al. Profiling the metabolic proteome of bovine mammary tissue. Proteomics 2008, 8:1502-1515.
-
(2008)
Proteomics
, vol.8
, pp. 1502-1515
-
-
Beddek, A.J.1
Rawson, P.2
Peng, L.3
Snell, R.4
Lehnert, K.5
Ward, H.E.6
-
119
-
-
52649098420
-
Regional differences in porcine adipocytes isolated from skeletal muscle and adipose tissues as identified by a proteomic approach
-
Gondret F., Guitton N., Guillerm-Regost C., Louveau I. Regional differences in porcine adipocytes isolated from skeletal muscle and adipose tissues as identified by a proteomic approach. J Anim Sci 2008, 86:2115-2125.
-
(2008)
J Anim Sci
, vol.86
, pp. 2115-2125
-
-
Gondret, F.1
Guitton, N.2
Guillerm-Regost, C.3
Louveau, I.4
-
120
-
-
1242294371
-
Copper-associated liver disease: a proteomics study of copper challenge in a sheep model
-
Simpson D.M., Beynon R.J., Robertson D.H.L., Loughran M.J., Haywood S. Copper-associated liver disease: a proteomics study of copper challenge in a sheep model. Proteomics 2004, 4:524-536.
-
(2004)
Proteomics
, vol.4
, pp. 524-536
-
-
Simpson, D.M.1
Beynon, R.J.2
Robertson, D.H.L.3
Loughran, M.J.4
Haywood, S.5
-
121
-
-
79952318327
-
Proteomic analysis of swine serum following highly virulent classical swine fever virus infection
-
Sun J-fu, Shi Z-xue, Guo H-cheng, Li S., Tu C-chun Proteomic analysis of swine serum following highly virulent classical swine fever virus infection. Virol J 2011, 8:107.
-
(2011)
Virol J
, vol.8
, pp. 107
-
-
Sun, J.-F.1
Shi, Z.-X.2
Guo, H.-C.3
Li, S.4
Tu, C.-C.5
-
122
-
-
34748885730
-
Integrated analytical approach in veal calves administered the anabolic androgenic steroids boldenone and boldione: urine and plasma kinetic profile and changes in plasma protein expression
-
Draisci R., Montesissa C., Santamaria B., D'Ambrosio C., Ferretti G., Merlanti R., et al. Integrated analytical approach in veal calves administered the anabolic androgenic steroids boldenone and boldione: urine and plasma kinetic profile and changes in plasma protein expression. Proteomics 2007, 7:3184-3193.
-
(2007)
Proteomics
, vol.7
, pp. 3184-3193
-
-
Draisci, R.1
Montesissa, C.2
Santamaria, B.3
D'Ambrosio, C.4
Ferretti, G.5
Merlanti, R.6
-
123
-
-
0348147648
-
Characterization of a bovine pregnancy-associated protein using two-dimensional gel electrophoresis, N-terminal sequencing and mass spectrometry
-
Pyo J., Hwang S.-I., Oh J., Lee S.-J., Kang S.-C., Kim J.-S., et al. Characterization of a bovine pregnancy-associated protein using two-dimensional gel electrophoresis, N-terminal sequencing and mass spectrometry. Proteomics 2003, 3:2420-2427.
-
(2003)
Proteomics
, vol.3
, pp. 2420-2427
-
-
Pyo, J.1
Hwang, S.-I.2
Oh, J.3
Lee, S.-J.4
Kang, S.-C.5
Kim, J.-S.6
-
124
-
-
75949088794
-
Differential expression of liver proteins in Chianina and Holstein young bulls
-
Miarelli M., Signorelli F. Differential expression of liver proteins in Chianina and Holstein young bulls. J Anim Sci 2010, 88:593-598.
-
(2010)
J Anim Sci
, vol.88
, pp. 593-598
-
-
Miarelli, M.1
Signorelli, F.2
-
125
-
-
38649086403
-
Comparative proteomic analysis of livers from ketotic cows
-
Xu C., Wang Z. Comparative proteomic analysis of livers from ketotic cows. Vet Res Commun 2008, 32:263-273.
-
(2008)
Vet Res Commun
, vol.32
, pp. 263-273
-
-
Xu, C.1
Wang, Z.2
-
126
-
-
79955760759
-
Purification and identification of sperm surface proteins and changes during epididymal maturation
-
Belleannee C., Belghazi M., Labas V., Teixeira-Gomes A.-P., Gatti J.L., Dacheux J.-L., et al. Purification and identification of sperm surface proteins and changes during epididymal maturation. Proteomics 2011, 11:1952-1964.
-
(2011)
Proteomics
, vol.11
, pp. 1952-1964
-
-
Belleannee, C.1
Belghazi, M.2
Labas, V.3
Teixeira-Gomes, A.-P.4
Gatti, J.L.5
Dacheux, J.-L.6
-
127
-
-
84861341390
-
Proteomic characterization by 2-DE in bovine serum and whey from healthy and mastitis affected farm animals
-
In Press, available online December.
-
Alonso-Fauste I, Andrés M, Iturralde M, Lampreave F, Gallart J, Alava MA. Proteomic characterization by 2-DE in bovine serum and whey from healthy and mastitis affected farm animals. J Proteomics In Press, available online December 2011, http://dx.doi.org/10.1016/j.jprot.2011.11.035.
-
(2011)
J Proteomics.
-
-
Alonso-Fauste, I.1
Andrés, M.2
Iturralde, M.3
Lampreave, F.4
Gallart, J.5
Alava, M.A.6
-
128
-
-
84862923501
-
Proteomics analysis of egg white proteins from different egg varieties
-
Wang J., Liang Y., Omana D.A., Kav N.N.V., Wu J. Proteomics analysis of egg white proteins from different egg varieties. J Agric Food Chem 2012, 60:272-282.
-
(2012)
J Agric Food Chem
, vol.60
, pp. 272-282
-
-
Wang, J.1
Liang, Y.2
Omana, D.A.3
Kav, N.N.V.4
Wu, J.5
-
129
-
-
34547872702
-
Global cooling: cold acclimation and the expression of soluble proteins in carp skeletal muscle
-
McLean L., Young I.S., Doherty M.K., Robertson D.H.L., Cossins A.R., Gracey A.Y., et al. Global cooling: cold acclimation and the expression of soluble proteins in carp skeletal muscle. Proteomics 2007, 7:2667-2681.
-
(2007)
Proteomics
, vol.7
, pp. 2667-2681
-
-
McLean, L.1
Young, I.S.2
Doherty, M.K.3
Robertson, D.H.L.4
Cossins, A.R.5
Gracey, A.Y.6
-
130
-
-
70249141958
-
Effect of cadmium in the clam Ruditapes decussatus assessed by proteomic analysis
-
Chora S., Starita-Geribaldi M., Guigonis J.-M., Samson M., Roméo M., Bebianno M.J. Effect of cadmium in the clam Ruditapes decussatus assessed by proteomic analysis. Aquat Toxicol 2009, 94:300-308.
-
(2009)
Aquat Toxicol
, vol.94
, pp. 300-308
-
-
Chora, S.1
Starita-Geribaldi, M.2
Guigonis, J.-M.3
Samson, M.4
Roméo, M.5
Bebianno, M.J.6
-
131
-
-
17644385255
-
Monitoring food quality by microfluidic electrophoresis, gas chromatography, and mass spectrometry techniques: effects of aquaculture on the sea bass (Dicentrarchus labrax)
-
Monti G., De Napoli L., Mainolfi P., Barone R., Guida M., Marino G., et al. Monitoring food quality by microfluidic electrophoresis, gas chromatography, and mass spectrometry techniques: effects of aquaculture on the sea bass (Dicentrarchus labrax). Anal Chem 2005, 77:2587-2594.
-
(2005)
Anal Chem
, vol.77
, pp. 2587-2594
-
-
Monti, G.1
De Napoli, L.2
Mainolfi, P.3
Barone, R.4
Guida, M.5
Marino, G.6
-
132
-
-
84863673589
-
Analysis and comparison of proteomic profiles of tear fluid from human, cow, sheep, and camel eyes
-
Shamsi F.A., Chen Z., Liang J., Li K., Al-Rajhi A.A., Chaudhry I.A., et al. Analysis and comparison of proteomic profiles of tear fluid from human, cow, sheep, and camel eyes. Invest Ophthalmol Vis Sci 2011, 52:9156-9165.
-
(2011)
Invest Ophthalmol Vis Sci
, vol.52
, pp. 9156-9165
-
-
Shamsi, F.A.1
Chen, Z.2
Liang, J.3
Li, K.4
Al-Rajhi, A.A.5
Chaudhry, I.A.6
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