-
2
-
-
0002583785
-
X-ray studies of the structures of hair, wool and related fibres. I. General
-
Astbury W.T., and Street A. X-ray studies of the structures of hair, wool and related fibres. I. General. Trans R Soc Lond A 230 (1931) 75-101
-
(1931)
Trans R Soc Lond A
, vol.230
, pp. 75-101
-
-
Astbury, W.T.1
Street, A.2
-
3
-
-
0031638368
-
The material bone: structure mechanical function relations
-
Weiner S., and Wagner H.D. The material bone: structure mechanical function relations. Annu Rev Mater Sci 28 (1998) 271-298
-
(1998)
Annu Rev Mater Sci
, vol.28
, pp. 271-298
-
-
Weiner, S.1
Wagner, H.D.2
-
5
-
-
10644284474
-
Materials with structural hierarchy
-
Lakes R. Materials with structural hierarchy. Nature 361 6412 (1993) 511-515
-
(1993)
Nature
, vol.361
, Issue.6412
, pp. 511-515
-
-
Lakes, R.1
-
6
-
-
3142565234
-
The mechanical efficiency of natural materials
-
Wegst U.G.K., and Ashby M.F. The mechanical efficiency of natural materials. Philos Mag 84 21 (2004) 2167-2181
-
(2004)
Philos Mag
, vol.84
, Issue.21
, pp. 2167-2181
-
-
Wegst, U.G.K.1
Ashby, M.F.2
-
7
-
-
84884017036
-
-
Princeton University Press, Princeton, NJ
-
Vincent J.F.V. Structural biomaterials (1990), Princeton University Press, Princeton, NJ 244
-
(1990)
Structural biomaterials
, pp. 244
-
-
Vincent, J.F.V.1
-
8
-
-
34548501731
-
Nature's hierarchical materials
-
Fratzl P., and Weinkamer R. Nature's hierarchical materials. Prog Mater Sci 52 8 (2007) 1263-1334
-
(2007)
Prog Mater Sci
, vol.52
, Issue.8
, pp. 1263-1334
-
-
Fratzl, P.1
Weinkamer, R.2
-
9
-
-
22044457920
-
Skeleton of Euplectella sp.: structural hierarchy from the nanoscale to the macroscale
-
Aizenberg J., et al. Skeleton of Euplectella sp.: structural hierarchy from the nanoscale to the macroscale. Science 309 5732 (2005) 275-278
-
(2005)
Science
, vol.309
, Issue.5732
, pp. 275-278
-
-
Aizenberg, J.1
-
10
-
-
0142075533
-
Mechanics of the human red blood cell deformed by optical tweezers
-
Dao M., Lim C.T., and Suresh S. Mechanics of the human red blood cell deformed by optical tweezers. J Mech Phys Solids 51 11-12 (2003) 2259-2280
-
(2003)
J Mech Phys Solids
, vol.51
, Issue.11-12
, pp. 2259-2280
-
-
Dao, M.1
Lim, C.T.2
Suresh, S.3
-
11
-
-
17844372789
-
Connections between single-cell biomechanics and human disease states: gastrointestinal cancer and malaria
-
Suresh S., et al. Connections between single-cell biomechanics and human disease states: gastrointestinal cancer and malaria. Acta Biomater 1 1 (2005) 15-30
-
(2005)
Acta Biomater
, vol.1
, Issue.1
, pp. 15-30
-
-
Suresh, S.1
-
12
-
-
0142011812
-
Cell and molecular mechanics of biological materials
-
Bao G., and Suresh S. Cell and molecular mechanics of biological materials. Nat Mater 2 11 (2003) 715-725
-
(2003)
Nat Mater
, vol.2
, Issue.11
, pp. 715-725
-
-
Bao, G.1
Suresh, S.2
-
13
-
-
0344097945
-
Large deformation of living cells using laser traps
-
Lim C.T., et al. Large deformation of living cells using laser traps. Acta Mater 52 7 (2004) 1837-1845
-
(2004)
Acta Mater
, vol.52
, Issue.7
, pp. 1837-1845
-
-
Lim, C.T.1
-
14
-
-
0001487747
-
Mechanism of plastic deformation in crystals
-
Taylor G.I. Mechanism of plastic deformation in crystals. Proc R Soc A 145 (1934) 362
-
(1934)
Proc R Soc A
, vol.145
, pp. 362
-
-
Taylor, G.I.1
-
17
-
-
34548382639
-
Nano- and micromechanical properties of hierarchical biological materials and tissues
-
Buehler M.J. Nano- and micromechanical properties of hierarchical biological materials and tissues. J Mater Sci 42 21 (2007) 8765-8770
-
(2007)
J Mater Sci
, vol.42
, Issue.21
, pp. 8765-8770
-
-
Buehler, M.J.1
-
18
-
-
34547675884
-
Fracture mechanics of protein materials
-
Buehler M.J., and Ackbarow T. Fracture mechanics of protein materials. Mater Today 10 9 (2007) 46-58
-
(2007)
Mater Today
, vol.10
, Issue.9
, pp. 46-58
-
-
Buehler, M.J.1
Ackbarow, T.2
-
19
-
-
0345822802
-
Deformation mechanism and Inverse Hall-Petch behavior in nanocrystalline materials
-
Wolf D., et al. Deformation mechanism and Inverse Hall-Petch behavior in nanocrystalline materials. Z Metall 94 (2003) 1052-1061
-
(2003)
Z Metall
, vol.94
, pp. 1052-1061
-
-
Wolf, D.1
-
20
-
-
0032484943
-
The strongest size
-
Yip S. The strongest size. Nature 391 (1998) 532-533
-
(1998)
Nature
, vol.391
, pp. 532-533
-
-
Yip, S.1
-
21
-
-
0035338864
-
Dislocation sources in discrete dislocation simulations of thin film plasticity and the Hall-Petch relation
-
Blanckenhagen B.v., Gumbsch P., and Arzt E. Dislocation sources in discrete dislocation simulations of thin film plasticity and the Hall-Petch relation. Model Simul Mater Sci Eng 9 (2001) 157-169
-
(2001)
Model Simul Mater Sci Eng
, vol.9
, pp. 157-169
-
-
Blanckenhagen, B.v.1
Gumbsch, P.2
Arzt, E.3
-
22
-
-
0026140973
-
Hall-Petch relation in nanocrystalline solids
-
Nieh T.G., and Wadsworth J. Hall-Petch relation in nanocrystalline solids. Scripta Met 25 4 (1991)
-
(1991)
Scripta Met
, vol.25
, Issue.4
-
-
Nieh, T.G.1
Wadsworth, J.2
-
24
-
-
34249307315
-
Nuclear organization of the genome and the potential for gene regulation
-
Fraser P., and Bickmore W. Nuclear organization of the genome and the potential for gene regulation. Nature 447 7143 (2007) 413-417
-
(2007)
Nature
, vol.447
, Issue.7143
, pp. 413-417
-
-
Fraser, P.1
Bickmore, W.2
-
25
-
-
33747152561
-
Matrix elasticity directs stem cell lineage specification
-
Engler A.J., et al. Matrix elasticity directs stem cell lineage specification. Cell 126 4 (2006) 677-689
-
(2006)
Cell
, vol.126
, Issue.4
, pp. 677-689
-
-
Engler, A.J.1
-
26
-
-
33747630320
-
Atomistic and continuum modeling of mechanical properties of collagen: elasticity, fracture and self-assembly
-
Buehler M.J. Atomistic and continuum modeling of mechanical properties of collagen: elasticity, fracture and self-assembly. J Mater Res 21 8 (2006) 1947-1961
-
(2006)
J Mater Res
, vol.21
, Issue.8
, pp. 1947-1961
-
-
Buehler, M.J.1
-
27
-
-
33747610222
-
Nature designs tough collagen: explaining the nanostructure of collagen fibrils
-
Buehler M.J. Nature designs tough collagen: explaining the nanostructure of collagen fibrils. Proc Natl Acad Sci USA 103 33 (2006) 12285-12290
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.33
, pp. 12285-12290
-
-
Buehler, M.J.1
-
28
-
-
4043114822
-
Structure and mechanical quality of the collagen-mineral nano-composite in bone
-
Fratzl P., et al. Structure and mechanical quality of the collagen-mineral nano-composite in bone. J Mater Chem 14 14 (2004) 2115-2123
-
(2004)
J Mater Chem
, vol.14
, Issue.14
, pp. 2115-2123
-
-
Fratzl, P.1
-
29
-
-
4644294045
-
Flexibility of type I collagen and mechanical property of connective tissue
-
An K.N., Sun Y.L., and Luo Z.P. Flexibility of type I collagen and mechanical property of connective tissue. Biorheology 41 3-4 (2004) 239-246
-
(2004)
Biorheology
, vol.41
, Issue.3-4
, pp. 239-246
-
-
An, K.N.1
Sun, Y.L.2
Luo, Z.P.3
-
30
-
-
0000523565
-
Structure of collagen
-
Ramachandran G.N., and Kartha G. Structure of collagen. Nature 176 (1955) 593-595
-
(1955)
Nature
, vol.176
, pp. 593-595
-
-
Ramachandran, G.N.1
Kartha, G.2
-
31
-
-
34247342181
-
Rules of engagement
-
Doyle J. Rules of engagement. Nature 446 (2007) 860
-
(2007)
Nature
, vol.446
, pp. 860
-
-
Doyle, J.1
-
32
-
-
0037079054
-
Computational systems biology
-
Kitano H. Computational systems biology. Nature 420 6912 (2002) 206-210
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 206-210
-
-
Kitano, H.1
-
33
-
-
0036500993
-
Systems biology: a brief overview
-
Kitano H. Systems biology: a brief overview. Science 295 5560 (2002) 1662-1664
-
(2002)
Science
, vol.295
, Issue.5560
, pp. 1662-1664
-
-
Kitano, H.1
-
34
-
-
0344052669
-
Molecular mechanistic origin of the toughness of natural adhesives, fibres and composites
-
Smith B.L., et al. Molecular mechanistic origin of the toughness of natural adhesives, fibres and composites. Nature 399 6738 (1999) 761-763
-
(1999)
Nature
, vol.399
, Issue.6738
, pp. 761-763
-
-
Smith, B.L.1
-
35
-
-
0008538098
-
Atomic force microscopy
-
Prater C.B., Butt H.J., and Hansma P.K. Atomic force microscopy. Nature 345 6278 (1990) 839-840
-
(1990)
Nature
, vol.345
, Issue.6278
, pp. 839-840
-
-
Prater, C.B.1
Butt, H.J.2
Hansma, P.K.3
-
36
-
-
4544285974
-
Stretching type II collagen with optical tweezers
-
Sun Y.L., et al. Stretching type II collagen with optical tweezers. J Biomech 37 11 (2004) 1665-1669
-
(2004)
J Biomech
, vol.37
, Issue.11
, pp. 1665-1669
-
-
Sun, Y.L.1
-
37
-
-
33846184163
-
Nanogranular origins of the strength of bone
-
Tai K., Ulm F.J., and Ortiz C. Nanogranular origins of the strength of bone. NanoLetters 11 (2006) 2520-2525
-
(2006)
NanoLetters
, vol.11
, pp. 2520-2525
-
-
Tai, K.1
Ulm, F.J.2
Ortiz, C.3
-
38
-
-
33746736836
-
Experimental techniques for single cell and single molecule biomechanics
-
Lim C.T., et al. Experimental techniques for single cell and single molecule biomechanics. Mater Sci Eng C: Biomim Supramol Syst 26 8 (2006) 1278-1288
-
(2006)
Mater Sci Eng C: Biomim Supramol Syst
, vol.26
, Issue.8
, pp. 1278-1288
-
-
Lim, C.T.1
-
39
-
-
34548453463
-
A perspective of materials modeling
-
Yip S. (Ed), Springer
-
Goddard W.A. A perspective of materials modeling. In: Yip S. (Ed). Handbook of materials modeling (2006), Springer
-
(2006)
Handbook of materials modeling
-
-
Goddard, W.A.1
-
40
-
-
36749062973
-
Hierarchies, multiple energy barriers and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains
-
Ackbarow T., et al. Hierarchies, multiple energy barriers and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains. Proc Natl Acad Sci USA 104 (2007) 16410-16415
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 16410-16415
-
-
Ackbarow, T.1
-
41
-
-
53049095826
-
Hierarchical coexistence of universality and diversity controls robustness and multi-functionality in protein materials
-
Ackbarow T., and Buehler M.J. Hierarchical coexistence of universality and diversity controls robustness and multi-functionality in protein materials. J Comput Theor Nanos 5 7 (2008) 1193-1204
-
(2008)
J Comput Theor Nanos
, vol.5
, Issue.7
, pp. 1193-1204
-
-
Ackbarow, T.1
Buehler, M.J.2
-
42
-
-
0018101150
-
Models for specific adhesion of cells to cells
-
Bell G.I. Models for specific adhesion of cells to cells. Science 200 4342 (1978) 618-627
-
(1978)
Science
, vol.200
, Issue.4342
, pp. 618-627
-
-
Bell, G.I.1
-
43
-
-
0028071373
-
Entropic elasticity of lambda-phage DNA
-
Bustamante C., et al. Entropic elasticity of lambda-phage DNA. Science 265 5178 (1994) 1599-1600
-
(1994)
Science
, vol.265
, Issue.5178
, pp. 1599-1600
-
-
Bustamante, C.1
-
44
-
-
33847242278
-
Coarse-grained molecular dynamics simulations of membrane proteins and peptides
-
Bond P.J., et al. Coarse-grained molecular dynamics simulations of membrane proteins and peptides. J Struct Biol 157 3 (2007) 593-605
-
(2007)
J Struct Biol
, vol.157
, Issue.3
, pp. 593-605
-
-
Bond, P.J.1
-
45
-
-
0002252311
-
Large-scale atomistic simulations of dynamic fracture
-
Vashishta P., Kalia R.K., and Nakano A. Large-scale atomistic simulations of dynamic fracture. Comp Sci Eng (1999) 56-65
-
(1999)
Comp Sci Eng
, pp. 56-65
-
-
Vashishta, P.1
Kalia, R.K.2
Nakano, A.3
-
46
-
-
0036036473
-
Atomistic aspects of crack propagation in brittle materials: multimillion atom molecular dynamics simulations
-
Rountree C.L., et al. Atomistic aspects of crack propagation in brittle materials: multimillion atom molecular dynamics simulations. Annu Rev Mater Res 32 (2002) 377-400
-
(2002)
Annu Rev Mater Res
, vol.32
, pp. 377-400
-
-
Rountree, C.L.1
-
47
-
-
31144457411
-
Dynamical fracture instabilities due to local hyperelasticity at crack tips
-
Buehler M.J., and Gao H.J. Dynamical fracture instabilities due to local hyperelasticity at crack tips. Nature 439 7074 (2006) 307-310
-
(2006)
Nature
, vol.439
, Issue.7074
, pp. 307-310
-
-
Buehler, M.J.1
Gao, H.J.2
-
48
-
-
0345064192
-
Hyperelasticity governs dynamic fracture at a critical length scale
-
Buehler M.J., Abraham F.F., and Gao H. Hyperelasticity governs dynamic fracture at a critical length scale. Nature 426 (2003) 141-146
-
(2003)
Nature
, vol.426
, pp. 141-146
-
-
Buehler, M.J.1
Abraham, F.F.2
Gao, H.3
-
49
-
-
53049098734
-
Ultra large scale atomistic simulations of dynamic fracture
-
Schommers W., and Rieth A. (Eds), American Scientific Publishers (ASP)
-
Buehler M.J., and Gao H. Ultra large scale atomistic simulations of dynamic fracture. In: Schommers W., and Rieth A. (Eds). Handbook of theoretical and computational nanotechnology (2006), American Scientific Publishers (ASP)
-
(2006)
Handbook of theoretical and computational nanotechnology
-
-
Buehler, M.J.1
Gao, H.2
-
50
-
-
33644894526
-
Multi-paradigm modeling of dynamical crack propagation in silicon using the ReaxFF reactive force field
-
Buehler M.J., van Duin A.C.T., and Goddard W.A. Multi-paradigm modeling of dynamical crack propagation in silicon using the ReaxFF reactive force field. Phys Rev Lett 96 9 (2006) 095505
-
(2006)
Phys Rev Lett
, vol.96
, Issue.9
, pp. 095505
-
-
Buehler, M.J.1
van Duin, A.C.T.2
Goddard, W.A.3
-
51
-
-
35348999510
-
Threshold crack speed controls dynamical fracture of silicon single crystals
-
Buehler M.J., et al. Threshold crack speed controls dynamical fracture of silicon single crystals. Phys Rev Lett 99 (2007) 165502
-
(2007)
Phys Rev Lett
, vol.99
, pp. 165502
-
-
Buehler, M.J.1
-
52
-
-
0034979318
-
Biomolecular simulations: recent developments in force fields, simulations of enzyme catalysis, protein-ligand, protein-protein, and protein-nucleic acid noncovalent interactions
-
Wang W., et al. Biomolecular simulations: recent developments in force fields, simulations of enzyme catalysis, protein-ligand, protein-protein, and protein-nucleic acid noncovalent interactions. Annu Rev Biophys Biomol Struct 30 (2001) 211-243
-
(2001)
Annu Rev Biophys Biomol Struct
, vol.30
, pp. 211-243
-
-
Wang, W.1
-
53
-
-
4444351490
-
Empirical force fields for biological macromolecules: overview and issues
-
Mackerell A.D. Empirical force fields for biological macromolecules: overview and issues. J Comput Chem 25 13 (2004) 1584-1604
-
(2004)
J Comput Chem
, vol.25
, Issue.13
, pp. 1584-1604
-
-
Mackerell, A.D.1
-
54
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips J.C., et al. Scalable molecular dynamics with NAMD. J Comput Chem 26 16 (2005) 1781-1802
-
(2005)
J Comput Chem
, vol.26
, Issue.16
, pp. 1781-1802
-
-
Phillips, J.C.1
-
55
-
-
8344276781
-
NAMD: a parallel, object oriented molecular dynamics program
-
Nelson M.T., et al. NAMD: a parallel, object oriented molecular dynamics program. Int J Supercomput Appl High Perform Comput 10 4 (1996) 251-268
-
(1996)
Int J Supercomput Appl High Perform Comput
, vol.10
, Issue.4
, pp. 251-268
-
-
Nelson, M.T.1
-
56
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell A.D., et al. All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B 102 18 (1998) 3586-3616
-
(1998)
J Phys Chem B
, vol.102
, Issue.18
, pp. 3586-3616
-
-
MacKerell, A.D.1
-
58
-
-
9144240095
-
Dreiding - a generic force-field for molecular simulations
-
Mayo S.L., Olafson B.D., and Goddard W.A. Dreiding - a generic force-field for molecular simulations. J Phys Chem 94 26 (1990) 8897-8909
-
(1990)
J Phys Chem
, vol.94
, Issue.26
, pp. 8897-8909
-
-
Mayo, S.L.1
Olafson, B.D.2
Goddard, W.A.3
-
59
-
-
0042041206
-
UFF, a full periodic-table force-field for molecular mechanics and molecular-dynamics simulations
-
Rappe A.K., et al. UFF, a full periodic-table force-field for molecular mechanics and molecular-dynamics simulations. J Am Chem Soc 114 25 (1992) 10024-10035
-
(1992)
J Am Chem Soc
, vol.114
, Issue.25
, pp. 10024-10035
-
-
Rappe, A.K.1
-
60
-
-
0029633186
-
AMBER, a package of computer-programs for applying molecular mechanics, normal-mode analysis, molecular-dynamics and free-energy calculations to simulate the structural and energetic properties of molecules
-
Pearlman D.A., et al. AMBER, a package of computer-programs for applying molecular mechanics, normal-mode analysis, molecular-dynamics and free-energy calculations to simulate the structural and energetic properties of molecules. Comput Phys Commun 91 1-3 (1995) 1-41
-
(1995)
Comput Phys Commun
, vol.91
, Issue.1-3
, pp. 1-41
-
-
Pearlman, D.A.1
-
61
-
-
0035909763
-
ReaxFF: a reactive force field for hydrocarbons
-
van Duin A.C.T., et al. ReaxFF: a reactive force field for hydrocarbons. J Phys Chem A 105 (2001) 9396-9409
-
(2001)
J Phys Chem A
, vol.105
, pp. 9396-9409
-
-
van Duin, A.C.T.1
-
62
-
-
0037017208
-
A second-generation reactive empirical bond order (REBO) potential energy expression for hydrocarbons
-
Brenner D.W., et al. A second-generation reactive empirical bond order (REBO) potential energy expression for hydrocarbons. J Phys: Condens Matter 14 4 (2002) 783-802
-
(2002)
J Phys: Condens Matter
, vol.14
, Issue.4
, pp. 783-802
-
-
Brenner, D.W.1
-
63
-
-
0001256721
-
A reactive potential for hydrocarbons with intermolecular interactions
-
Stuart S.J., Tutein A.B., and Harrison J.A. A reactive potential for hydrocarbons with intermolecular interactions. J Chem Phys 112 14 (2000) 6472-6486
-
(2000)
J Chem Phys
, vol.112
, Issue.14
, pp. 6472-6486
-
-
Stuart, S.J.1
Tutein, A.B.2
Harrison, J.A.3
-
64
-
-
8344220786
-
Shock waves in high-energy materials: the initial chemical events in nitramine RDX
-
Strachan A., et al. Shock waves in high-energy materials: the initial chemical events in nitramine RDX. Phys Rev Lett 91 9 (2003)
-
(2003)
Phys Rev Lett
, vol.91
, Issue.9
-
-
Strachan, A.1
-
65
-
-
13444288029
-
Development of the ReaxFF reactive force field for describing transition metal catalyzed reactions, with application to the initial stages of the catalytic formation of carbon nanotubes
-
Nielson K.D., et al. Development of the ReaxFF reactive force field for describing transition metal catalyzed reactions, with application to the initial stages of the catalytic formation of carbon nanotubes. J Phys Chem A 109 (2005) 49
-
(2005)
J Phys Chem A
, vol.109
, pp. 49
-
-
Nielson, K.D.1
-
66
-
-
0037714495
-
ReaxFF SiO: reactive force field for silicon and silicon oxide systems
-
van Duin A.C.T., et al. ReaxFF SiO: reactive force field for silicon and silicon oxide systems. J Phys Chem A 107 (2003) 3803-3811
-
(2003)
J Phys Chem A
, vol.107
, pp. 3803-3811
-
-
van Duin, A.C.T.1
-
67
-
-
20344381581
-
Optimization and application of lithium parameters for the reactive force field, ReaxFF
-
Han S.S., et al. Optimization and application of lithium parameters for the reactive force field, ReaxFF. J Phys Chem A 109 20 (2005) 4575-4582
-
(2005)
J Phys Chem A
, vol.109
, Issue.20
, pp. 4575-4582
-
-
Han, S.S.1
-
68
-
-
18744389144
-
Simulations on the thermal decomposition of a poly(dimethylsiloxane) polymer using the ReaxFF reactive force field
-
Chenoweth K., et al. Simulations on the thermal decomposition of a poly(dimethylsiloxane) polymer using the ReaxFF reactive force field. J Am Chem Soc 127 19 (2005) 7192-7202
-
(2005)
J Am Chem Soc
, vol.127
, Issue.19
, pp. 7192-7202
-
-
Chenoweth, K.1
-
69
-
-
22944477722
-
Thermal decomposition of RDX from reactive molecular dynamics
-
Strachan A., et al. Thermal decomposition of RDX from reactive molecular dynamics. J Chem Phys 122 5 (2005)
-
(2005)
J Chem Phys
, vol.122
, Issue.5
-
-
Strachan, A.1
-
70
-
-
13444288194
-
ReaxFF(MgH) reactive force field for magnesium hydride systems
-
Cheung S., et al. ReaxFF(MgH) reactive force field for magnesium hydride systems. J Phys Chem A 109 5 (2005) 851-859
-
(2005)
J Phys Chem A
, vol.109
, Issue.5
, pp. 851-859
-
-
Cheung, S.1
-
71
-
-
33745371186
-
Application of ReaxFF reactive force fields to transition metal catalyzed nanotube formation
-
van Duin A.C.T., et al. Application of ReaxFF reactive force fields to transition metal catalyzed nanotube formation. Abstr Papers Am Chem Soc 227 (2004) U1031
-
(2004)
Abstr Papers Am Chem Soc
, vol.227
-
-
van Duin, A.C.T.1
-
72
-
-
34548671447
-
Hierarchical chemo-nanomechanics of stretching protein molecules: entropic elasticity, protein unfolding and molecular fracture
-
Buehler M.J. Hierarchical chemo-nanomechanics of stretching protein molecules: entropic elasticity, protein unfolding and molecular fracture. J Mech Mater Struct 2 6 (2007) 1019-1057
-
(2007)
J Mech Mater Struct
, vol.2
, Issue.6
, pp. 1019-1057
-
-
Buehler, M.J.1
-
73
-
-
53049092615
-
-
Datta D, van Duin ACT, Goddard WA. Extending ReaxFF to biomacromolecules. Unpublished; 2005.
-
Datta D, van Duin ACT, Goddard WA. Extending ReaxFF to biomacromolecules. Unpublished; 2005.
-
-
-
-
74
-
-
33745373074
-
The computational materials design facility (CMDF): a powerful framework for multiparadigm multi-scale simulations
-
Buehler M.J., et al. The computational materials design facility (CMDF): a powerful framework for multiparadigm multi-scale simulations. Mater Res Soc Proc 894 (2006) LL3.8
-
(2006)
Mater Res Soc Proc
, vol.894
-
-
Buehler, M.J.1
-
75
-
-
0031848099
-
Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation
-
Lu H., et al. Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation. Biophys J 75 2 (1998) 662-671
-
(1998)
Biophys J
, vol.75
, Issue.2
, pp. 662-671
-
-
Lu, H.1
-
77
-
-
3242785354
-
Large-scale molecular-dynamics simulation of 19 billion particles
-
Kadau K., Germann T.C., and Lomdahl P.S. Large-scale molecular-dynamics simulation of 19 billion particles. Int J Mod Phys C 15 (2004) 193
-
(2004)
Int J Mod Phys C
, vol.15
, pp. 193
-
-
Kadau, K.1
Germann, T.C.2
Lomdahl, P.S.3
-
79
-
-
0001543236
-
Virial theorem and stress calculation in molecular-dynamics
-
Tsai D.H. Virial theorem and stress calculation in molecular-dynamics. J Chem Phys 70 3 (1979) 1375-1382
-
(1979)
J Chem Phys
, vol.70
, Issue.3
, pp. 1375-1382
-
-
Tsai, D.H.1
-
80
-
-
3142605093
-
Calculation of stress in atomistic simulation
-
Zimmerman J.A., et al. Calculation of stress in atomistic simulation. Model Simul Mater Sci Eng 12 (2004) S319-S332
-
(2004)
Model Simul Mater Sci Eng
, vol.12
-
-
Zimmerman, J.A.1
-
82
-
-
27544500803
-
Atomic force microscopy of collagen structure in bone and dentine revealed by osteoclastic resorption
-
Bozec L., et al. Atomic force microscopy of collagen structure in bone and dentine revealed by osteoclastic resorption. Ultramicroscopy 105 1-4 (2005) 79-89
-
(2005)
Ultramicroscopy
, vol.105
, Issue.1-4
, pp. 79-89
-
-
Bozec, L.1
-
83
-
-
33745674667
-
Exploring the mechanical properties of single vimentin intermediate filaments by atomic force microscopy
-
Guzman C., et al. Exploring the mechanical properties of single vimentin intermediate filaments by atomic force microscopy. J Mol Biol 360 3 (2006) 623-630
-
(2006)
J Mol Biol
, vol.360
, Issue.3
, pp. 623-630
-
-
Guzman, C.1
-
84
-
-
0034702770
-
Energy landscape of streptavidin-biotin complexes measured by atomic force microscopy
-
Yuan C.B., et al. Energy landscape of streptavidin-biotin complexes measured by atomic force microscopy. Biochemistry 39 33 (2000) 10219-10223
-
(2000)
Biochemistry
, vol.39
, Issue.33
, pp. 10219-10223
-
-
Yuan, C.B.1
-
85
-
-
0034807221
-
Stretching short biopolymers using optical tweezers
-
Sun Y.L., Luo Z.P., and An K.N. Stretching short biopolymers using optical tweezers. Biochem Biophys Res Commun 286 4 (2001) 826-830
-
(2001)
Biochem Biophys Res Commun
, vol.286
, Issue.4
, pp. 826-830
-
-
Sun, Y.L.1
Luo, Z.P.2
An, K.N.3
-
86
-
-
0017411710
-
Protein data bank - computer-based archival file for macromolecular structures
-
Bernstein F.C., et al. Protein data bank - computer-based archival file for macromolecular structures. J Mol Biol 112 3 (1977) 535-542
-
(1977)
J Mol Biol
, vol.112
, Issue.3
, pp. 535-542
-
-
Bernstein, F.C.1
-
87
-
-
2942700208
-
Mechanistic aspects of fracture and R-curve behavior in human cortical bone
-
Nalla R.K., et al. Mechanistic aspects of fracture and R-curve behavior in human cortical bone. Biomaterials 26 2 (2005) 217-231
-
(2005)
Biomaterials
, vol.26
, Issue.2
, pp. 217-231
-
-
Nalla, R.K.1
-
88
-
-
4444342089
-
Characteristic dimensions and the micro-mechanisms of fracture and fatigue in 'nano' and 'bio' materials
-
Ritchie R.O., et al. Characteristic dimensions and the micro-mechanisms of fracture and fatigue in 'nano' and 'bio' materials. Int J Fract 128 1-4 (2004) 1-15
-
(2004)
Int J Fract
, vol.128
, Issue.1-4
, pp. 1-15
-
-
Ritchie, R.O.1
-
89
-
-
0028910961
-
Radial packing, order, and disorder in collagen fibrils
-
Hulmes D.J.S., et al. Radial packing, order, and disorder in collagen fibrils. Biophys J 68 5 (1995) 1661-1670
-
(1995)
Biophys J
, vol.68
, Issue.5
, pp. 1661-1670
-
-
Hulmes, D.J.S.1
-
90
-
-
0030246115
-
Elongation mechanism of collagen fibrils and force-strain relations of tendon at each level of structural hierarchy
-
Sasaki N., and Odajima S. Elongation mechanism of collagen fibrils and force-strain relations of tendon at each level of structural hierarchy. J Biomech 29 9 (1996) 1131-1136
-
(1996)
J Biomech
, vol.29
, Issue.9
, pp. 1131-1136
-
-
Sasaki, N.1
Odajima, S.2
-
91
-
-
33745181159
-
Microfibrillar structure of type I collagen in situ
-
Orgel J.P.R.O., et al. Microfibrillar structure of type I collagen in situ. Proc Natl Acad Sci USA 103 24 (1995) 9001-9005
-
(1995)
Proc Natl Acad Sci USA
, vol.103
, Issue.24
, pp. 9001-9005
-
-
Orgel, J.P.R.O.1
-
92
-
-
0037185947
-
Viscoelastic properties of collagen: synchrotron radiation investigations and structural model
-
Puxkandl R., et al. Viscoelastic properties of collagen: synchrotron radiation investigations and structural model. Philos Trans R Soc Lond Ser B: Biol Sci 357 1418 (2002) 191-197
-
(2002)
Philos Trans R Soc Lond Ser B: Biol Sci
, vol.357
, Issue.1418
, pp. 191-197
-
-
Puxkandl, R.1
-
94
-
-
27644512759
-
Analysis of fibrous proteins from electron microscopy images
-
Zervakis M., Gkoumplias V., and Tzaphlidou M. Analysis of fibrous proteins from electron microscopy images. Med Eng Phys 27 8 (2005) 655-667
-
(2005)
Med Eng Phys
, vol.27
, Issue.8
, pp. 655-667
-
-
Zervakis, M.1
Gkoumplias, V.2
Tzaphlidou, M.3
-
95
-
-
22144487761
-
Nanomanipulation and aggregation limitations of self-assembling structural proteins
-
Layton B.E., et al. Nanomanipulation and aggregation limitations of self-assembling structural proteins. Microelectron J 36 7 (2005) 644-649
-
(2005)
Microelectron J
, vol.36
, Issue.7
, pp. 644-649
-
-
Layton, B.E.1
-
96
-
-
22244448651
-
Topography and mechanical properties of single molecules of type I collagen using atomic force microscopy
-
Bozec L., and Horton M. Topography and mechanical properties of single molecules of type I collagen using atomic force microscopy. Biophys J 88 6 (2005) 4223-4231
-
(2005)
Biophys J
, vol.88
, Issue.6
, pp. 4223-4231
-
-
Bozec, L.1
Horton, M.2
-
97
-
-
0036064087
-
Direct quantification of the flexibility of type I collagen monomer
-
Sun Y.L., et al. Direct quantification of the flexibility of type I collagen monomer. Biochem Biophys Res Commun 295 2 (2002) 382-386
-
(2002)
Biochem Biophys Res Commun
, vol.295
, Issue.2
, pp. 382-386
-
-
Sun, Y.L.1
-
98
-
-
0036148830
-
Numerical damage models using a structural approach: application in bones and ligaments
-
Arnoux P.J., et al. Numerical damage models using a structural approach: application in bones and ligaments. Eur Phys J: Appl Phys 17 1 (2002) 65-73
-
(2002)
Eur Phys J: Appl Phys
, vol.17
, Issue.1
, pp. 65-73
-
-
Arnoux, P.J.1
-
99
-
-
0031862042
-
The peculiar collagens of mussel byssus
-
Waite J.H., Qin X.X., and Coyne K.J. The peculiar collagens of mussel byssus. Matrix Biol 17 2 (1998) 93-106
-
(1998)
Matrix Biol
, vol.17
, Issue.2
, pp. 93-106
-
-
Waite, J.H.1
Qin, X.X.2
Coyne, K.J.3
-
100
-
-
0034283338
-
Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair
-
Kramer R.Z., et al. Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair. J Mol Biol 301 5 (2000) 1191-1205
-
(2000)
J Mol Biol
, vol.301
, Issue.5
, pp. 1191-1205
-
-
Kramer, R.Z.1
-
101
-
-
19744370421
-
Elastic properties, Young's modulus determination and structural stability of the tropocollagen molecule: a computational study by steered molecular dynamics
-
Lorenzo A.C., and Caffarena E.R. Elastic properties, Young's modulus determination and structural stability of the tropocollagen molecule: a computational study by steered molecular dynamics. J Biomech 38 7 (2005) 1527-1533
-
(2005)
J Biomech
, vol.38
, Issue.7
, pp. 1527-1533
-
-
Lorenzo, A.C.1
Caffarena, E.R.2
-
102
-
-
13444292142
-
Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability
-
Persikov A.V., et al. Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability. Biochemistry 44 5 (2005) 1414-1422
-
(2005)
Biochemistry
, vol.44
, Issue.5
, pp. 1414-1422
-
-
Persikov, A.V.1
-
103
-
-
25844517949
-
Computational modeling of type I collagen fibers to determine the extracellular matrix structure of connective tissues
-
Israelowitz M., et al. Computational modeling of type I collagen fibers to determine the extracellular matrix structure of connective tissues. Protein Eng Des Select 18 7 (2005) 329-335
-
(2005)
Protein Eng Des Select
, vol.18
, Issue.7
, pp. 329-335
-
-
Israelowitz, M.1
-
104
-
-
2342518375
-
Structural models of osteogenesis imperfecta-associated variants in the COL1A1 gene
-
Mooney S.D., and Klein T.E. Structural models of osteogenesis imperfecta-associated variants in the COL1A1 gene. Mol Cell Proteom 1 11 (2002) 868-875
-
(2002)
Mol Cell Proteom
, vol.1
, Issue.11
, pp. 868-875
-
-
Mooney, S.D.1
Klein, T.E.2
-
105
-
-
0037025113
-
Conformational preferences of substituted prolines in the collagen triple helix
-
Mooney S.D., Kollman P.A., and Klein T.E. Conformational preferences of substituted prolines in the collagen triple helix. Biopolymers 64 2 (2002) 63-71
-
(2002)
Biopolymers
, vol.64
, Issue.2
, pp. 63-71
-
-
Mooney, S.D.1
Kollman, P.A.2
Klein, T.E.3
-
106
-
-
0035129522
-
Computed free energy differences between point mutations in a collagen-like peptide
-
Mooney S.D., et al. Computed free energy differences between point mutations in a collagen-like peptide. Biopolymers 58 3 (2001) 347-353
-
(2001)
Biopolymers
, vol.58
, Issue.3
, pp. 347-353
-
-
Mooney, S.D.1
-
107
-
-
0034106681
-
Finite element modeling of human skin using an isotropic, nonlinear elastic constitutive model
-
Bischoff J.E., Arruda E.M., and Grosh K. Finite element modeling of human skin using an isotropic, nonlinear elastic constitutive model. J Biomech 33 6 (2000) 645-652
-
(2000)
J Biomech
, vol.33
, Issue.6
, pp. 645-652
-
-
Bischoff, J.E.1
Arruda, E.M.2
Grosh, K.3
-
108
-
-
3042640664
-
Elastic energy storage in unmineralized and mineralized extracellular matrices (ECMs): a comparison between molecular modeling and experimental measurements
-
Freeman J.W., and Silver F.H. Elastic energy storage in unmineralized and mineralized extracellular matrices (ECMs): a comparison between molecular modeling and experimental measurements. J Theor Biol 229 3 (2004) 371-381
-
(2004)
J Theor Biol
, vol.229
, Issue.3
, pp. 371-381
-
-
Freeman, J.W.1
Silver, F.H.2
-
110
-
-
59449108658
-
-
Gautieri A, Buehler MJ, Redaelli A. Deformation rate controls elasticity and unfolding pathway of single tropocollagen molecules. J Mech Behav Biomed Mater 2008. doi:10.1016/j.jmbbm.2008.03.001.
-
Gautieri A, Buehler MJ, Redaelli A. Deformation rate controls elasticity and unfolding pathway of single tropocollagen molecules. J Mech Behav Biomed Mater 2008. doi:10.1016/j.jmbbm.2008.03.001.
-
-
-
-
111
-
-
34347403503
-
Entropic elasticity controls nanomechanics of single tropocollagen molecules
-
Buehler M.J., and Wong S.Y. Entropic elasticity controls nanomechanics of single tropocollagen molecules. Biophys J 93 1 (2007) 37-43
-
(2007)
Biophys J
, vol.93
, Issue.1
, pp. 37-43
-
-
Buehler, M.J.1
Wong, S.Y.2
-
112
-
-
0000655706
-
Interatomic potentials from 1st principle-calculations - the force matching method
-
Ercolessi F., and Adams J.B. Interatomic potentials from 1st principle-calculations - the force matching method. Europhys Lett 28 8 (1994) 583-588
-
(1994)
Europhys Lett
, vol.28
, Issue.8
, pp. 583-588
-
-
Ercolessi, F.1
Adams, J.B.2
-
113
-
-
0003422388
-
-
WH Freeman & Co., New York
-
Lodish H.B.A., Zipursky S.L., Matsudaira P., Baltimore D., and Darnell J.E. Molecular cell biology (1999), WH Freeman & Co., New York
-
(1999)
Molecular cell biology
-
-
Lodish, H.B.A.1
Zipursky, S.L.2
Matsudaira, P.3
Baltimore, D.4
Darnell, J.E.5
-
114
-
-
0035978878
-
Molecular mechanisms of ageing in connective tissues
-
Bailey A.J. Molecular mechanisms of ageing in connective tissues. Mech Ageing Dev 122 7 (2001) 735-755
-
(2001)
Mech Ageing Dev
, vol.122
, Issue.7
, pp. 735-755
-
-
Bailey, A.J.1
-
115
-
-
0015754345
-
The chemistry of the collagen cross-links
-
Robins S.P., and Bailey A.J. The chemistry of the collagen cross-links. Biochem J 135 (1973) 657-665
-
(1973)
Biochem J
, vol.135
, pp. 657-665
-
-
Robins, S.P.1
Bailey, A.J.2
-
116
-
-
0035970899
-
Quantitative measurement of short-range chemical bonding forces
-
Lantz M.A., et al. Quantitative measurement of short-range chemical bonding forces. Science 291 5513 (2001) 2580-2583
-
(2001)
Science
, vol.291
, Issue.5513
, pp. 2580-2583
-
-
Lantz, M.A.1
-
117
-
-
0033548611
-
How strong is a covalent bond?
-
Grandbois M., et al. How strong is a covalent bond?. Science 283 5408 (1999) 1727-1730
-
(1999)
Science
, vol.283
, Issue.5408
, pp. 1727-1730
-
-
Grandbois, M.1
-
118
-
-
33747122720
-
Nano measurements with micro-devices: mechanical properties of hydrated collagen fibrils
-
Eppell S.J., et al. Nano measurements with micro-devices: mechanical properties of hydrated collagen fibrils. J R Soc Interf 3 6 (2006) 117-121
-
(2006)
J R Soc Interf
, vol.3
, Issue.6
, pp. 117-121
-
-
Eppell, S.J.1
-
119
-
-
33750141273
-
Fracture and ageing in bone: toughness and structural characterization
-
Ritchie R.O., et al. Fracture and ageing in bone: toughness and structural characterization. Strain 42 4 (2006) 225-232
-
(2006)
Strain
, vol.42
, Issue.4
, pp. 225-232
-
-
Ritchie, R.O.1
-
120
-
-
19744378214
-
Fracture in human cortical bone: local fracture criteria and toughening mechanisms
-
Nalla R.K., et al. Fracture in human cortical bone: local fracture criteria and toughening mechanisms. J Biomech 38 7 (2005) 1517-1525
-
(2005)
J Biomech
, vol.38
, Issue.7
, pp. 1517-1525
-
-
Nalla, R.K.1
-
121
-
-
35048874768
-
Nanomechanics of collagen fibrils under varying cross-link densities: atomistic and continuum studies
-
10.1016/j.jmbbm.2007.04.001
-
Buehler M.J. Nanomechanics of collagen fibrils under varying cross-link densities: atomistic and continuum studies. J Mech Behav Biomed Mater 1 1 (2008) 1-2 10.1016/j.jmbbm.2007.04.001
-
(2008)
J Mech Behav Biomed Mater
, vol.1
, Issue.1
, pp. 1-2
-
-
Buehler, M.J.1
-
123
-
-
0000357002
-
The phenomenon of rupture and flows in solids
-
Griffith A.A. The phenomenon of rupture and flows in solids. Philos Trans R Soc A 221 (1920) 163-198
-
(1920)
Philos Trans R Soc A
, vol.221
, pp. 163-198
-
-
Griffith, A.A.1
-
124
-
-
27544485345
-
Nanoscale deformation mechanisms in bone
-
Gupta H.S., et al. Nanoscale deformation mechanisms in bone. NanoLetters 5 10 (2005) 2108-2111
-
(2005)
NanoLetters
, vol.5
, Issue.10
, pp. 2108-2111
-
-
Gupta, H.S.1
-
125
-
-
0033798413
-
Mineralized collagen fibrils: a mechanical model with a staggered arrangement of mineral particles
-
Jager I., and Fratzl P. Mineralized collagen fibrils: a mechanical model with a staggered arrangement of mineral particles. Biophys J 79 4 (2000) 1737-1746
-
(2000)
Biophys J
, vol.79
, Issue.4
, pp. 1737-1746
-
-
Jager, I.1
Fratzl, P.2
-
126
-
-
30044437711
-
From brittle to ductile fracture of bone
-
Peterlik H., et al. From brittle to ductile fracture of bone. Nat Mater 5 1 (2006) 52-55
-
(2006)
Nat Mater
, vol.5
, Issue.1
, pp. 52-55
-
-
Peterlik, H.1
-
127
-
-
0037678697
-
Effect of orientation on the in vitro fracture toughness of dentin: the role of toughening mechanisms
-
Nalla R.K., Kinney J.H., and Ritchie R.O. Effect of orientation on the in vitro fracture toughness of dentin: the role of toughening mechanisms. Biomaterials 24 22 (2003) 3955-3968
-
(2003)
Biomaterials
, vol.24
, Issue.22
, pp. 3955-3968
-
-
Nalla, R.K.1
Kinney, J.H.2
Ritchie, R.O.3
-
128
-
-
0015894486
-
Defect in conversion of procollagen to collagen in a form of Ehlers-Danlos syndrome
-
Lichtens Jr., et al. Defect in conversion of procollagen to collagen in a form of Ehlers-Danlos syndrome. Science 182 4109 (1973) 298-300
-
(1973)
Science
, vol.182
, Issue.4109
, pp. 298-300
-
-
Lichtens, Jr.1
-
129
-
-
18244401096
-
Caffey disease: an unlikely collagenopathy
-
Glorieux F.H. Caffey disease: an unlikely collagenopathy. J Clin Invest 115 5 (2005) 1142-1144
-
(2005)
J Clin Invest
, vol.115
, Issue.5
, pp. 1142-1144
-
-
Glorieux, F.H.1
-
130
-
-
18844364204
-
Collagen structure: the Madras triple helix and the current scenario
-
Bhattacharjee A., and Bansal M. Collagen structure: the Madras triple helix and the current scenario. IUBMB Life 57 3 (2005) 161-172
-
(2005)
IUBMB Life
, vol.57
, Issue.3
, pp. 161-172
-
-
Bhattacharjee, A.1
Bansal, M.2
-
132
-
-
38649124900
-
Molecular architecture of collagen fibrils: a critical length scale for tough fibrils
-
10.1016/j.cap.2007.10.058
-
Buehler M.J. Molecular architecture of collagen fibrils: a critical length scale for tough fibrils. Curr Appl Phys 8 3-4 (2008) 440-442 10.1016/j.cap.2007.10.058
-
(2008)
Curr Appl Phys
, vol.8
, Issue.3-4
, pp. 440-442
-
-
Buehler, M.J.1
-
133
-
-
84886200574
-
Hierarchical Nanomechanics of Collagen Fibrils: Atomistic and Molecular Modeling
-
Fratzl P. (Ed), Springer
-
Buehler M.J. Hierarchical Nanomechanics of Collagen Fibrils: Atomistic and Molecular Modeling. In: Fratzl P. (Ed). Collagen: Structure and Mechanics (2008), Springer
-
(2008)
Collagen: Structure and Mechanics
-
-
Buehler, M.J.1
-
134
-
-
0031239231
-
Measurement of partition of stress between mineral and collagen phases in bone using X-ray diffraction techniques
-
Borsato K.S., and Sasaki N. Measurement of partition of stress between mineral and collagen phases in bone using X-ray diffraction techniques. J Biomech 30 9 (1997) 955-957
-
(1997)
J Biomech
, vol.30
, Issue.9
, pp. 955-957
-
-
Borsato, K.S.1
Sasaki, N.2
-
135
-
-
0035219275
-
Thermally labile domains in the collagen molecule
-
Miles C.A., and Bailey A.J. Thermally labile domains in the collagen molecule. Micron 32 3 (2001) 325-332
-
(2001)
Micron
, vol.32
, Issue.3
, pp. 325-332
-
-
Miles, C.A.1
Bailey, A.J.2
-
136
-
-
34548407835
-
Superelasticity, energy dissipation and strain hardening of vimentin coiled-coil intermediate filaments: atomistic and continuum studies
-
Ackbarow T., and Buehler M.J. Superelasticity, energy dissipation and strain hardening of vimentin coiled-coil intermediate filaments: atomistic and continuum studies. J Mater Sci 42 21 (2007) 8771-8787
-
(2007)
J Mater Sci
, vol.42
, Issue.21
, pp. 8771-8787
-
-
Ackbarow, T.1
Buehler, M.J.2
-
137
-
-
34347399570
-
Molecular nanomechanics of nascent bone: fibrillar toughening by mineralization
-
Buehler M.J. Molecular nanomechanics of nascent bone: fibrillar toughening by mineralization. Nanotechnology 18 (2007) 295102
-
(2007)
Nanotechnology
, vol.18
, pp. 295102
-
-
Buehler, M.J.1
-
138
-
-
34047114419
-
-
Taylor D, Hazenberg JG, Lee TC. Living with cracks: damage and repair in human bone. Nat Mater 2007;6(4):263-6.
-
Taylor D, Hazenberg JG, Lee TC. Living with cracks: damage and repair in human bone. Nat Mater 2007;6(4):263-6.
-
-
-
-
139
-
-
33845199750
-
Cooperative deformation of mineral and collagen in bone at the nanoscale
-
Gupta H.S., et al. Cooperative deformation of mineral and collagen in bone at the nanoscale. Proc Natl Acad Sci USA 103 (2006) 17741-17746
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 17741-17746
-
-
Gupta, H.S.1
-
140
-
-
0027277009
-
Mineral and organic matrix interaction in normally calcifying tendon visualized in 3 dimensions by high-voltage electron-microscopic tomography and graphic image reconstruction
-
Landis W.J., et al. Mineral and organic matrix interaction in normally calcifying tendon visualized in 3 dimensions by high-voltage electron-microscopic tomography and graphic image reconstruction. J Struct Biol 110 (1993) 39-54
-
(1993)
J Struct Biol
, vol.110
, pp. 39-54
-
-
Landis, W.J.1
-
141
-
-
23244461731
-
Sacrificial bonds and hidden length dissipate energy as mineralized fibrils separate during bone fracture
-
Fantner G.E., et al. Sacrificial bonds and hidden length dissipate energy as mineralized fibrils separate during bone fracture. Nat Mater 4 8 (2005) 612-616
-
(2005)
Nat Mater
, vol.4
, Issue.8
, pp. 612-616
-
-
Fantner, G.E.1
-
142
-
-
0035856905
-
Bone indentation recovery time correlates with bond reforming time
-
Thompson J.B., et al. Bone indentation recovery time correlates with bond reforming time. Nature 414 6865 (2001) 773-776
-
(2001)
Nature
, vol.414
, Issue.6865
, pp. 773-776
-
-
Thompson, J.B.1
-
143
-
-
33745259886
-
Application of fracture mechanics concepts to hierarchical biomechanics of bone and bone-like materials
-
Gao H.J. Application of fracture mechanics concepts to hierarchical biomechanics of bone and bone-like materials. Int J Fract 138 1-4 (2006) 101-137
-
(2006)
Int J Fract
, vol.138
, Issue.1-4
, pp. 101-137
-
-
Gao, H.J.1
-
144
-
-
0037362192
-
Mechanistic fracture criteria for the failure of human cortical bone
-
Nalla R.K., Kinney J.H., and Ritchie R.O. Mechanistic fracture criteria for the failure of human cortical bone. Nat Mater 2 3 (2003) 164-168
-
(2003)
Nat Mater
, vol.2
, Issue.3
, pp. 164-168
-
-
Nalla, R.K.1
Kinney, J.H.2
Ritchie, R.O.3
-
145
-
-
33846796325
-
Optimized adhesives for strong, lightweight, damage-resistant, nanocomposite materials: new insights from natural materials
-
Hansma P.K., Turner P.J., and Ruoff R.S. Optimized adhesives for strong, lightweight, damage-resistant, nanocomposite materials: new insights from natural materials. Nanotechnology 18 4 (2007)
-
(2007)
Nanotechnology
, vol.18
, Issue.4
-
-
Hansma, P.K.1
Turner, P.J.2
Ruoff, R.S.3
-
146
-
-
33646167262
-
Hierarchical interconnections in the nano-composite material bone: fibrillar cross-links resist fracture on several length scales
-
Fantner G.E., et al. Hierarchical interconnections in the nano-composite material bone: fibrillar cross-links resist fracture on several length scales. Compos Sci Technol 66 9 (2006) 1205-1211
-
(2006)
Compos Sci Technol
, vol.66
, Issue.9
, pp. 1205-1211
-
-
Fantner, G.E.1
-
147
-
-
19644401188
-
Synchrotron diffraction study of deformation mechanisms in mineralized tendon
-
Gupta H.S., et al. Synchrotron diffraction study of deformation mechanisms in mineralized tendon. Phys Rev Lett 93 15 (2004)
-
(2004)
Phys Rev Lett
, vol.93
, Issue.15
-
-
Gupta, H.S.1
-
148
-
-
0002467378
-
Fast parallel algorithms for short-range molecular-dynamics
-
Plimpton S. Fast parallel algorithms for short-range molecular-dynamics. J Comput Phys 117 (1995) 1-19
-
(1995)
J Comput Phys
, vol.117
, pp. 1-19
-
-
Plimpton, S.1
-
149
-
-
10244251566
-
Local strain measurement within tendon
-
Screen H.R.C., et al. Local strain measurement within tendon. Strain 40 4 (2004) 157-163
-
(2004)
Strain
, vol.40
, Issue.4
, pp. 157-163
-
-
Screen, H.R.C.1
-
150
-
-
33744750875
-
-
Turner CH. Bone strength: current concepts. Skeletal development and remodeling in health, disease, and aging; 2006. p. 429-46.
-
Turner CH. Bone strength: current concepts. Skeletal development and remodeling in health, disease, and aging; 2006. p. 429-46.
-
-
-
-
151
-
-
0037610831
-
Materials become insensitive to flaws at nanoscale: lessons from nature
-
Gao H., et al. Materials become insensitive to flaws at nanoscale: lessons from nature. Proc Natl Acad Sci USA 100 10 (2003) 5597-5600
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.10
, pp. 5597-5600
-
-
Gao, H.1
-
152
-
-
33747650479
-
Cracking and adhesion at small scales: atomistic and continuum studies of flaw tolerant nanostructures
-
Buehler M.J., et al. Cracking and adhesion at small scales: atomistic and continuum studies of flaw tolerant nanostructures. Model Simul Mater Sci Eng 14 (2006) 799-816
-
(2006)
Model Simul Mater Sci Eng
, vol.14
, pp. 799-816
-
-
Buehler, M.J.1
-
153
-
-
7944238124
-
Surface energetics of hydroxyapatite: a DFT study
-
Zhu W.H., and Wu P. Surface energetics of hydroxyapatite: a DFT study. Chem Phys Lett 396 1-3 (2004) 38-42
-
(2004)
Chem Phys Lett
, vol.396
, Issue.1-3
, pp. 38-42
-
-
Zhu, W.H.1
Wu, P.2
-
154
-
-
35048874768
-
-
Buehler MJ. Nanomechanics of collagen fibrils under varying cross-link densities: atomistic and continuum studies. J Mech Behav Biomed Mater 2007. doi:10.1016/j.jmbbm.2007.04.001.
-
Buehler MJ. Nanomechanics of collagen fibrils under varying cross-link densities: atomistic and continuum studies. J Mech Behav Biomed Mater 2007. doi:10.1016/j.jmbbm.2007.04.001.
-
-
-
-
155
-
-
0642343446
-
Regulating bone formation via controlled scaffold degradation
-
Alsberg E., et al. Regulating bone formation via controlled scaffold degradation. J Dental Res 82 11 (2003) 903-908
-
(2003)
J Dental Res
, vol.82
, Issue.11
, pp. 903-908
-
-
Alsberg, E.1
-
156
-
-
0029123722
-
Cortical mineral-content of the radius assessed by peripheral qct predicts compressive strength on biomechanical testing
-
Louis O., et al. Cortical mineral-content of the radius assessed by peripheral qct predicts compressive strength on biomechanical testing. Bone 16 3 (1995) 375-379
-
(1995)
Bone
, vol.16
, Issue.3
, pp. 375-379
-
-
Louis, O.1
-
157
-
-
0025012729
-
Mechanical-properties of trabecular bone from the proximal femur - a quantitative CT study
-
Lotz J.C., Gerhart T.N., and Hayes W.C. Mechanical-properties of trabecular bone from the proximal femur - a quantitative CT study. J Comput Assist Tomogr 14 1 (1990) 107-114
-
(1990)
J Comput Assist Tomogr
, vol.14
, Issue.1
, pp. 107-114
-
-
Lotz, J.C.1
Gerhart, T.N.2
Hayes, W.C.3
-
158
-
-
0344628627
-
Historical review: another 50th anniversary - new periodicities in coiled coils
-
Gruber M., and Lupas A.N. Historical review: another 50th anniversary - new periodicities in coiled coils. Trends Biochem Sci 28 12 (2003) 679-685
-
(2003)
Trends Biochem Sci
, vol.28
, Issue.12
, pp. 679-685
-
-
Gruber, M.1
Lupas, A.N.2
-
159
-
-
0035201307
-
The structure and function of nuclear lamins: implications for disease
-
Moir R.D., and Spann T.P. The structure and function of nuclear lamins: implications for disease. Cell Mol Life Sci 58 12-13 (2001) 1748-1757
-
(2001)
Cell Mol Life Sci
, vol.58
, Issue.12-13
, pp. 1748-1757
-
-
Moir, R.D.1
Spann, T.P.2
-
160
-
-
0035831041
-
Lamins and disease: insights into nuclear infrastructure
-
Wilson K.L., Zastrow M.S., and Lee K.K. Lamins and disease: insights into nuclear infrastructure. Cell 104 5 (2001) 647-650
-
(2001)
Cell
, vol.104
, Issue.5
, pp. 647-650
-
-
Wilson, K.L.1
Zastrow, M.S.2
Lee, K.K.3
-
161
-
-
4344685822
-
Scaffolds, levers, rods and springs: diverse cellular functions of long coiled-coil proteins
-
Rose A., and Meier I. Scaffolds, levers, rods and springs: diverse cellular functions of long coiled-coil proteins. Cell Mol Life Sci 61 16 (2004) 1996-2009
-
(2004)
Cell Mol Life Sci
, vol.61
, Issue.16
, pp. 1996-2009
-
-
Rose, A.1
Meier, I.2
-
162
-
-
0037335755
-
Molecular architecture of intermediate filaments
-
Strelkov S.V., Herrmann H., and Aebi U. Molecular architecture of intermediate filaments. Bioessays 25 3 (2003) 243-251
-
(2003)
Bioessays
, vol.25
, Issue.3
, pp. 243-251
-
-
Strelkov, S.V.1
Herrmann, H.2
Aebi, U.3
-
163
-
-
34547516861
-
Hydrophobic association of {alpha}-helices, steric dewetting, and enthalpic barriers to protein folding
-
Maccallum J.L., et al. Hydrophobic association of {alpha}-helices, steric dewetting, and enthalpic barriers to protein folding. Proc Natl Acad Sci USA 104 15 (2007) 6206-6210
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.15
, pp. 6206-6210
-
-
Maccallum, J.L.1
-
164
-
-
0034653908
-
The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges
-
Burkhard P., et al. The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges. Struct Fold Des 8 3 (2000) 223-230
-
(2000)
Struct Fold Des
, vol.8
, Issue.3
, pp. 223-230
-
-
Burkhard, P.1
-
165
-
-
0037569616
-
Mechanics of vimentin intermediate filaments
-
Wang N., and Stamenovic D. Mechanics of vimentin intermediate filaments. J Muscle Res Cell Motil 23 5-6 (2002) 535-540
-
(2002)
J Muscle Res Cell Motil
, vol.23
, Issue.5-6
, pp. 535-540
-
-
Wang, N.1
Stamenovic, D.2
-
166
-
-
5144230784
-
Assessing the flexibility of intermediate filaments by atomic force microscopy
-
Mucke N., et al. Assessing the flexibility of intermediate filaments by atomic force microscopy. J Mol Biol 335 5 (2004) 1241-1250
-
(2004)
J Mol Biol
, vol.335
, Issue.5
, pp. 1241-1250
-
-
Mucke, N.1
-
167
-
-
1642503683
-
Intermediate filaments are dynamic and motile elements of cellular architecture
-
Helfand B.T., Chang L., and Goldman R.D. Intermediate filaments are dynamic and motile elements of cellular architecture. J Cell Sci 117 2 (2004) 133-141
-
(2004)
J Cell Sci
, vol.117
, Issue.2
, pp. 133-141
-
-
Helfand, B.T.1
Chang, L.2
Goldman, R.D.3
-
168
-
-
33846628445
-
Biomechanical properties of intermediate filaments: from tissues to single filaments and back
-
Kreplak L., and Fudge D. Biomechanical properties of intermediate filaments: from tissues to single filaments and back. Bioessays 29 1 (2007) 26-35
-
(2007)
Bioessays
, vol.29
, Issue.1
, pp. 26-35
-
-
Kreplak, L.1
Fudge, D.2
-
169
-
-
0037297399
-
Modeling alpha-helical coiled-coil interactions: the axial and azimuthal alignment of 1B segments from vimentin intermediate filaments
-
Smith T.A., et al. Modeling alpha-helical coiled-coil interactions: the axial and azimuthal alignment of 1B segments from vimentin intermediate filaments. Proteins Struct Funct Genet 50 2 (2003) 207-212
-
(2003)
Proteins Struct Funct Genet
, vol.50
, Issue.2
, pp. 207-212
-
-
Smith, T.A.1
-
170
-
-
6344291659
-
Molecular mechanisms underlying the assembly of intermediate filaments
-
Kreplak L., Aebi U., and Herrmann H. Molecular mechanisms underlying the assembly of intermediate filaments. Exp Cell Res 301 1 (2004) 77-83
-
(2004)
Exp Cell Res
, vol.301
, Issue.1
, pp. 77-83
-
-
Kreplak, L.1
Aebi, U.2
Herrmann, H.3
-
171
-
-
3943078618
-
Intermediate filaments: molecular structure, assembly mechanism, and integration into functionally distinct intracellular scaffolds
-
Herrmann H., and Aebi U. Intermediate filaments: molecular structure, assembly mechanism, and integration into functionally distinct intracellular scaffolds. Annu Rev Biochem 73 (2004) 749-789
-
(2004)
Annu Rev Biochem
, vol.73
, pp. 749-789
-
-
Herrmann, H.1
Aebi, U.2
-
172
-
-
5144220584
-
Crystal structure of the human lamin a coil 2B dimer: implications for the head-to-tail association of nuclear lamins
-
Strelkov S.V., et al. Crystal structure of the human lamin a coil 2B dimer: implications for the head-to-tail association of nuclear lamins. J Mol Biol 343 4 (2004) 1067-1080
-
(2004)
J Mol Biol
, vol.343
, Issue.4
, pp. 1067-1080
-
-
Strelkov, S.V.1
-
173
-
-
0041319662
-
The mechanical properties of hydrated intermediate filaments: insights from hagfish slime threads
-
Fudge D.S., et al. The mechanical properties of hydrated intermediate filaments: insights from hagfish slime threads. Biophys J 85 3 (2003) 2015-2027
-
(2003)
Biophys J
, vol.85
, Issue.3
, pp. 2015-2027
-
-
Fudge, D.S.1
-
174
-
-
1042302712
-
Molecular design of the alpha-keratin composite: insights from a matrix-free model, hagfish slime threads
-
Fudge D.S., and Gosline J.M. Molecular design of the alpha-keratin composite: insights from a matrix-free model, hagfish slime threads. Proc R Soc Lond Ser B: Biol Sci 271 1536 (2004) 291-299
-
(2004)
Proc R Soc Lond Ser B: Biol Sci
, vol.271
, Issue.1536
, pp. 291-299
-
-
Fudge, D.S.1
Gosline, J.M.2
-
175
-
-
0034308278
-
The 'ins' and 'outs' of intermediate filament organization
-
Coulombe P.A., et al. The 'ins' and 'outs' of intermediate filament organization. Trends Cell Biol 10 10 (2000) 420-428
-
(2000)
Trends Cell Biol
, vol.10
, Issue.10
, pp. 420-428
-
-
Coulombe, P.A.1
-
176
-
-
0025765110
-
Viscoelastic properties of vimentin compared with other filamentous biopolymer networks
-
Janmey P.A., et al. Viscoelastic properties of vimentin compared with other filamentous biopolymer networks. J Cell Biol 113 1 (1991) 155-160
-
(1991)
J Cell Biol
, vol.113
, Issue.1
, pp. 155-160
-
-
Janmey, P.A.1
-
177
-
-
27744588225
-
Exploring the mechanical behavior of single intermediate filaments
-
Kreplak L., et al. Exploring the mechanical behavior of single intermediate filaments. J Mol Biol 354 3 (2005) 569-577
-
(2005)
J Mol Biol
, vol.354
, Issue.3
, pp. 569-577
-
-
Kreplak, L.1
-
178
-
-
33747798639
-
Nanomechanical properties of desmin intermediate filaments
-
Kiss B., Karsai A., and Kellermayer M.S.Z. Nanomechanical properties of desmin intermediate filaments. J Struct Biol 155 2 (2006) 327-339
-
(2006)
J Struct Biol
, vol.155
, Issue.2
, pp. 327-339
-
-
Kiss, B.1
Karsai, A.2
Kellermayer, M.S.Z.3
-
179
-
-
6344273968
-
Mechanisms of disease: intermediate filament proteins and their associated diseases
-
Omary M.B., Coulombe P.A., and McLean W.H.I. Mechanisms of disease: intermediate filament proteins and their associated diseases. New Engl J Med 351 20 (2004) 2087-2100
-
(2004)
New Engl J Med
, vol.351
, Issue.20
, pp. 2087-2100
-
-
Omary, M.B.1
Coulombe, P.A.2
McLean, W.H.I.3
-
180
-
-
30344444789
-
Mutations in vimentin disrupt the cytoskeleton in fibroblasts and delay execution of apoptosis
-
Schietke R., et al. Mutations in vimentin disrupt the cytoskeleton in fibroblasts and delay execution of apoptosis. Eur J Cell Biol 85 1 (2006) 1-10
-
(2006)
Eur J Cell Biol
, vol.85
, Issue.1
, pp. 1-10
-
-
Schietke, R.1
-
181
-
-
2942565983
-
Molecular and biophysical characterization of assembly-starter units of human vimentin
-
Mucke N., et al. Molecular and biophysical characterization of assembly-starter units of human vimentin. J Mol Biol 340 1 (2004) 97-114
-
(2004)
J Mol Biol
, vol.340
, Issue.1
, pp. 97-114
-
-
Mucke, N.1
-
182
-
-
0021103673
-
Periodic features in the amino-acid-sequence of nematode myosin rod
-
McLachlan A.D., and Karn J. Periodic features in the amino-acid-sequence of nematode myosin rod. J Mol Biol 164 4 (1983) 605-626
-
(1983)
J Mol Biol
, vol.164
, Issue.4
, pp. 605-626
-
-
McLachlan, A.D.1
Karn, J.2
-
183
-
-
0029957901
-
Heptad breaks in alpha-helical coiled coils: stutters and stammers
-
Brown J.H., Cohen C., and Parry D.A.D. Heptad breaks in alpha-helical coiled coils: stutters and stammers. Proteins Struct Funct Genet 26 2 (1996) 134-145
-
(1996)
Proteins Struct Funct Genet
, vol.26
, Issue.2
, pp. 134-145
-
-
Brown, J.H.1
Cohen, C.2
Parry, D.A.D.3
-
184
-
-
0037086445
-
Conserved segments 1A and 2B of the intermediate filament dimer: their atomic structures and role in filament assembly
-
Strelkov S.V., et al. Conserved segments 1A and 2B of the intermediate filament dimer: their atomic structures and role in filament assembly. EMBO J 21 6 (2002) 1255-1266
-
(2002)
EMBO J
, vol.21
, Issue.6
, pp. 1255-1266
-
-
Strelkov, S.V.1
-
185
-
-
0033618848
-
Intermediate filament assembly: temperature sensitivity and polymorphism
-
Herrmann H., and Aebi U. Intermediate filament assembly: temperature sensitivity and polymorphism. Cell Mol Life Sci 55 11 (1999) 1416-1431
-
(1999)
Cell Mol Life Sci
, vol.55
, Issue.11
, pp. 1416-1431
-
-
Herrmann, H.1
Aebi, U.2
-
186
-
-
0017849653
-
Fibrinogen - preliminary-analysis of amino-acid sequences of portions of alpha-chains, beta-chains and gamma-chains postulated to form interdomainal link between globular regions of molecule
-
Parry D.A.D. Fibrinogen - preliminary-analysis of amino-acid sequences of portions of alpha-chains, beta-chains and gamma-chains postulated to form interdomainal link between globular regions of molecule. J Mol Biol 120 4 (1978) 545-551
-
(1978)
J Mol Biol
, vol.120
, Issue.4
, pp. 545-551
-
-
Parry, D.A.D.1
-
187
-
-
0030462453
-
Energy considerations show that low-barrier hydrogen bonds do not offer a catalytic advantage over ordinary hydrogen bonds
-
Warshel A., and Papazyan A. Energy considerations show that low-barrier hydrogen bonds do not offer a catalytic advantage over ordinary hydrogen bonds. PNAS 93 24 (1996) 13665-13670
-
(1996)
PNAS
, vol.93
, Issue.24
, pp. 13665-13670
-
-
Warshel, A.1
Papazyan, A.2
-
188
-
-
34547275473
-
Brownian motion in a field of force and the diffusion model of chemical reactions
-
Kramers H.A. Brownian motion in a field of force and the diffusion model of chemical reactions. Physica 7 (1940) 10
-
(1940)
Physica
, vol.7
, pp. 10
-
-
Kramers, H.A.1
-
189
-
-
34249936024
-
Forces and bond dynamics in cell adhesion
-
Evans E.A., and Calderwood D.A. Forces and bond dynamics in cell adhesion. Science 316 5828 (2007) 1148-1153
-
(2007)
Science
, vol.316
, Issue.5828
, pp. 1148-1153
-
-
Evans, E.A.1
Calderwood, D.A.2
-
190
-
-
33645760748
-
Lifetime measurements reveal kinetic differences between homophilic cadherin bonds
-
Bayas M.V., et al. Lifetime measurements reveal kinetic differences between homophilic cadherin bonds. Biophys J 90 4 (2006) 1385-1395
-
(2006)
Biophys J
, vol.90
, Issue.4
, pp. 1385-1395
-
-
Bayas, M.V.1
-
191
-
-
53049095523
-
Mechanical switching and cooperative coupling of unbinding pathways in bioadhesion bonds
-
Evans E. Mechanical switching and cooperative coupling of unbinding pathways in bioadhesion bonds. Abstr Papers Am Chem Soc 227 (2004) U469-U470
-
(2004)
Abstr Papers Am Chem Soc
, vol.227
-
-
Evans, E.1
-
192
-
-
0034979287
-
Probing the relation between force - lifetime - and chemistry in single molecular bonds
-
Evans E. Probing the relation between force - lifetime - and chemistry in single molecular bonds. Annu Rev Biophys Biomol Struct 30 (2001) 105-128
-
(2001)
Annu Rev Biophys Biomol Struct
, vol.30
, pp. 105-128
-
-
Evans, E.1
-
193
-
-
0035957361
-
Chemically distinct transition states govern rapid dissociation of single l-selectin bonds under force
-
Evans E., et al. Chemically distinct transition states govern rapid dissociation of single l-selectin bonds under force. Proc Natl Acad Sci USA 98 7 (2001) 3784-3789
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.7
, pp. 3784-3789
-
-
Evans, E.1
-
194
-
-
0033552676
-
Looking inside molecular bonds at biological interfaces with dynamic force spectroscopy
-
Evans E.B. Looking inside molecular bonds at biological interfaces with dynamic force spectroscopy. Biophys Chem 82 2-3 (1999) 83-97
-
(1999)
Biophys Chem
, vol.82
, Issue.2-3
, pp. 83-97
-
-
Evans, E.B.1
-
195
-
-
0033531109
-
Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy
-
Merkel R., et al. Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy. Nature (London) 379 6714 (1999) 50-53
-
(1999)
Nature (London)
, vol.379
, Issue.6714
, pp. 50-53
-
-
Merkel, R.1
-
196
-
-
0031001349
-
Dynamic strength of molecular adhesion bonds
-
Evans E., and Ritchie K. Dynamic strength of molecular adhesion bonds. Biophys J 72 4 (1997) 1541-1555
-
(1997)
Biophys J
, vol.72
, Issue.4
, pp. 1541-1555
-
-
Evans, E.1
Ritchie, K.2
-
197
-
-
33645004171
-
Intrinsic rates and activation free energies from single-molecule pulling experiments
-
Dudko O.K., Hummer G., and Szabo A. Intrinsic rates and activation free energies from single-molecule pulling experiments. Phys Rev Lett 96 10 (2006)
-
(2006)
Phys Rev Lett
, vol.96
, Issue.10
-
-
Dudko, O.K.1
Hummer, G.2
Szabo, A.3
-
198
-
-
34250356054
-
Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins
-
Dudko O.K., et al. Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins. Biophys J 92 12 (2007) 4188-4195
-
(2007)
Biophys J
, vol.92
, Issue.12
, pp. 4188-4195
-
-
Dudko, O.K.1
-
199
-
-
0038650860
-
Kinetics from nonequilibrium single-molecule pulling experiments
-
Hummer G., and Szabo A. Kinetics from nonequilibrium single-molecule pulling experiments. Biophys J 85 1 (2003) 5-15
-
(2003)
Biophys J
, vol.85
, Issue.1
, pp. 5-15
-
-
Hummer, G.1
Szabo, A.2
-
200
-
-
23744478437
-
Free energy surfaces from single-molecule force spectroscopy
-
Hummer G., and Szabo A. Free energy surfaces from single-molecule force spectroscopy. Acc Chem Res 38 7 (2005) 504-513
-
(2005)
Acc Chem Res
, vol.38
, Issue.7
, pp. 504-513
-
-
Hummer, G.1
Szabo, A.2
-
201
-
-
0035957434
-
Free energy reconstruction from nonequilibrium single-molecule pulling experiments
-
Hummer G., and Szabo A. Free energy reconstruction from nonequilibrium single-molecule pulling experiments. Proc Natl Acad Sci USA 98 7 (2001) 3658-3661
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.7
, pp. 3658-3661
-
-
Hummer, G.1
Szabo, A.2
-
202
-
-
4244116139
-
Equilibrium free-energy differences from nonequilibrium measurements: a master-equation approach
-
Jarzynski C. Equilibrium free-energy differences from nonequilibrium measurements: a master-equation approach. Phys Rev E 56 5 (1997) 5018-5035
-
(1997)
Phys Rev E
, vol.56
, Issue.5
, pp. 5018-5035
-
-
Jarzynski, C.1
-
203
-
-
4243754128
-
Nonequilibrium equality for free energy differences
-
Jarzynski C. Nonequilibrium equality for free energy differences. Phys Rev Lett 78 14 (1997) 2690-2693
-
(1997)
Phys Rev Lett
, vol.78
, Issue.14
, pp. 2690-2693
-
-
Jarzynski, C.1
-
204
-
-
34250372605
-
Unraveling individual molecules by mechanical forces: theory meets experiment
-
Makarov D.E. Unraveling individual molecules by mechanical forces: theory meets experiment. Biophys J 92 12 (2007) 4135-4136
-
(2007)
Biophys J
, vol.92
, Issue.12
, pp. 4135-4136
-
-
Makarov, D.E.1
-
205
-
-
0345329950
-
Theoretical studies of the mechanical unfolding of the muscle protein titin: bridging the time-scale gap between simulation and experiment
-
Li P.C., and Makarov D.E. Theoretical studies of the mechanical unfolding of the muscle protein titin: bridging the time-scale gap between simulation and experiment. J Chem Phys 119 17 (2003) 9260-9268
-
(2003)
J Chem Phys
, vol.119
, Issue.17
, pp. 9260-9268
-
-
Li, P.C.1
Makarov, D.E.2
-
206
-
-
33645767959
-
Single-molecule unfolding force distributions reveal a funnel-shaped energy landscape
-
Schlierf M., and Rief M. Single-molecule unfolding force distributions reveal a funnel-shaped energy landscape. Biophys J 90 4 (2006) L33-L35
-
(2006)
Biophys J
, vol.90
, Issue.4
-
-
Schlierf, M.1
Rief, M.2
-
207
-
-
1642416324
-
Covalent versus electrostatic nature of the strong hydrogen bond: discrimination among single, double, and asymmetric single-well hydrogen bonds by variable-temperature X-ray crystallographic methods in beta-diketone enol RAHB systems
-
Gilli P., et al. Covalent versus electrostatic nature of the strong hydrogen bond: discrimination among single, double, and asymmetric single-well hydrogen bonds by variable-temperature X-ray crystallographic methods in beta-diketone enol RAHB systems. J Am Chem Soc 126 12 (2004) 3845-3855
-
(2004)
J Am Chem Soc
, vol.126
, Issue.12
, pp. 3845-3855
-
-
Gilli, P.1
-
208
-
-
33646547262
-
Force-dependent chemical kinetics of disulfide bond reduction observed with single-molecule techniques
-
Wiita A.P., et al. Force-dependent chemical kinetics of disulfide bond reduction observed with single-molecule techniques. Proc Natl Acad Sci USA 103 19 (2006) 7222-7227
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.19
, pp. 7222-7227
-
-
Wiita, A.P.1
-
209
-
-
33745672958
-
Energy barrier scalings in driven systems
-
Maloney C.E., and Lacks D.J. Energy barrier scalings in driven systems. Phys Rev E 73 6 (2006)
-
(2006)
Phys Rev E
, vol.73
, Issue.6
-
-
Maloney, C.E.1
Lacks, D.J.2
-
210
-
-
34547853938
-
Mechanical unfolding revisited through a simple but realistic model
-
West D.K., Olmsted P.D., and Paci E. Mechanical unfolding revisited through a simple but realistic model. J Chem Phys 124 15 (2006)
-
(2006)
J Chem Phys
, vol.124
, Issue.15
-
-
West, D.K.1
Olmsted, P.D.2
Paci, E.3
-
211
-
-
34547197930
-
Characterization of actomyosin bond properties in intact skeletal muscle by force spectroscopy
-
Bagni B.C.M.A., Romano G., and Cecchi G. Characterization of actomyosin bond properties in intact skeletal muscle by force spectroscopy. Proc Natl Acad Sci USA 104 22 (2007) 9284-9289
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.22
, pp. 9284-9289
-
-
Bagni, B.C.M.A.1
Romano, G.2
Cecchi, G.3
-
212
-
-
0036977558
-
The myosin coiled-coil is a truly elastic protein structure
-
Schwaiger I., et al. The myosin coiled-coil is a truly elastic protein structure. Nat Mater 1 4 (2002) 232-235
-
(2002)
Nat Mater
, vol.1
, Issue.4
, pp. 232-235
-
-
Schwaiger, I.1
-
214
-
-
33646172749
-
Coiled-coil nanomechanics and uncoiling and unfolding of the superhelix and alpha-helices of myosin
-
Root D.D., et al. Coiled-coil nanomechanics and uncoiling and unfolding of the superhelix and alpha-helices of myosin. Biophys J 90 8 (2006) 2852-2866
-
(2006)
Biophys J
, vol.90
, Issue.8
, pp. 2852-2866
-
-
Root, D.D.1
-
215
-
-
0036783392
-
Thermal folding and mechanical unfolding pathways of protein secondary structures
-
Cieplak M., Hoang T.X., and Robbins M.O. Thermal folding and mechanical unfolding pathways of protein secondary structures. Proteins Struct Funct Genet 49 1 (2002) 104-113
-
(2002)
Proteins Struct Funct Genet
, vol.49
, Issue.1
, pp. 104-113
-
-
Cieplak, M.1
Hoang, T.X.2
Robbins, M.O.3
-
216
-
-
0033064934
-
Unraveling proteins: a molecular mechanics study
-
Rohs R., Etchebest C., and Lavery R. Unraveling proteins: a molecular mechanics study. Biophys J 76 5 (1999) 2760-2768
-
(1999)
Biophys J
, vol.76
, Issue.5
, pp. 2760-2768
-
-
Rohs, R.1
Etchebest, C.2
Lavery, R.3
-
217
-
-
33645091911
-
Single molecule unzipping of coiled coils: sequence resolved stability profiles
-
Bornschlogl T., and Rief M. Single molecule unzipping of coiled coils: sequence resolved stability profiles. Phys Rev Lett 96 11 (2006)
-
(2006)
Phys Rev Lett
, vol.96
, Issue.11
-
-
Bornschlogl, T.1
Rief, M.2
-
218
-
-
0034720473
-
Dynamic measurement of single protein's mechanical properties
-
Mitsui K., et al. Dynamic measurement of single protein's mechanical properties. Biochem Biophys Res Commun 272 1 (2000) 55-63
-
(2000)
Biochem Biophys Res Commun
, vol.272
, Issue.1
, pp. 55-63
-
-
Mitsui, K.1
-
219
-
-
33749036851
-
Breaking bonds in the atomic force microscope: theory and analysis
-
Hanke F., and Kreuzer H.J. Breaking bonds in the atomic force microscope: theory and analysis. Phys Rev E 74 3 (2006)
-
(2006)
Phys Rev E
, vol.74
, Issue.3
-
-
Hanke, F.1
Kreuzer, H.J.2
-
220
-
-
33845542919
-
Elasticity of alpha-helical coiled coils
-
Wolgemuth C.W., and Sun X. Elasticity of alpha-helical coiled coils. Phys Rev Lett 97 24 (2006) 248101
-
(2006)
Phys Rev Lett
, vol.97
, Issue.24
, pp. 248101
-
-
Wolgemuth, C.W.1
Sun, X.2
-
221
-
-
33846940059
-
Mechanical unfolding of proteins: insights into biology, structure and folding
-
Forman J.R., and Clarke J. Mechanical unfolding of proteins: insights into biology, structure and folding. Curr Opin Struct Biol 17 1 (2007) 58-66
-
(2007)
Curr Opin Struct Biol
, vol.17
, Issue.1
, pp. 58-66
-
-
Forman, J.R.1
Clarke, J.2
-
222
-
-
33847273015
-
Force denaturation of proteins - an unfolding story
-
Brockwell D.J. Force denaturation of proteins - an unfolding story. Curr Nanosci 3 1 (2007) 3-15
-
(2007)
Curr Nanosci
, vol.3
, Issue.1
, pp. 3-15
-
-
Brockwell, D.J.1
-
223
-
-
33846428813
-
Spectrin domains lose cooperativity in forced unfolding
-
Randles L.G., Rounsevell R.W.S., and Clarke J. Spectrin domains lose cooperativity in forced unfolding. Biophys J 92 2 (2007) 571-577
-
(2007)
Biophys J
, vol.92
, Issue.2
, pp. 571-577
-
-
Randles, L.G.1
Rounsevell, R.W.S.2
Clarke, J.3
-
224
-
-
33751223863
-
Examining the influence of linkers and tertiary structure in the forced unfolding of multiple-repeat spectrin molecules
-
Paramore S., and Voth G.A. Examining the influence of linkers and tertiary structure in the forced unfolding of multiple-repeat spectrin molecules. Biophys J 91 9 (2006) 3436-3445
-
(2006)
Biophys J
, vol.91
, Issue.9
, pp. 3436-3445
-
-
Paramore, S.1
Voth, G.A.2
-
225
-
-
19444382704
-
Unfolding a linker between helical repeats
-
Ortiz V., et al. Unfolding a linker between helical repeats. J Mol Biol 349 3 (2005) 638-647
-
(2005)
J Mol Biol
, vol.349
, Issue.3
, pp. 638-647
-
-
Ortiz, V.1
-
226
-
-
34250337834
-
Equilibrium unfolding of the poly(glutamic acid)(20) helix
-
Finke J.M., et al. Equilibrium unfolding of the poly(glutamic acid)(20) helix. Biopolymers 86 3 (2007) 193-211
-
(2007)
Biopolymers
, vol.86
, Issue.3
, pp. 193-211
-
-
Finke, J.M.1
-
227
-
-
33846381622
-
Direct observation of microscopic reversibility in single-molecule protein folding
-
Day R., and Daggett V. Direct observation of microscopic reversibility in single-molecule protein folding. J Mol Biol 366 2 (2007) 677-686
-
(2007)
J Mol Biol
, vol.366
, Issue.2
, pp. 677-686
-
-
Day, R.1
Daggett, V.2
-
228
-
-
18744376043
-
Nonlinear elasticity in biological gels
-
Storm C., et al. Nonlinear elasticity in biological gels. Nature 435 (2005) 191-194
-
(2005)
Nature
, vol.435
, pp. 191-194
-
-
Storm, C.1
-
229
-
-
2542468691
-
Design and crystal structure of bacteriophage T4 mini-fibritin NCCF
-
Boudko S.P., et al. Design and crystal structure of bacteriophage T4 mini-fibritin NCCF. J Mol Biol 339 4 (2004) 927-935
-
(2004)
J Mol Biol
, vol.339
, Issue.4
, pp. 927-935
-
-
Boudko, S.P.1
-
230
-
-
34249930159
-
Single-molecule experiments in vitro and in silico
-
Sotomayor M., and Schulten K. Single-molecule experiments in vitro and in silico. Science 316 5828 (2007) 1144-1148
-
(2007)
Science
, vol.316
, Issue.5828
, pp. 1144-1148
-
-
Sotomayor, M.1
Schulten, K.2
-
231
-
-
0037569632
-
Unfolding of titin domains studied by molecular dynamics simulations
-
Gao M., Lu H., and Schulten K. Unfolding of titin domains studied by molecular dynamics simulations. J Muscle Res Cell Motil 23 5-6 (2002) 513-521
-
(2002)
J Muscle Res Cell Motil
, vol.23
, Issue.5-6
, pp. 513-521
-
-
Gao, M.1
Lu, H.2
Schulten, K.3
-
232
-
-
0031011695
-
Reversible unfolding of individual titin immunoglobulin domains by AFM
-
Rief M., et al. Reversible unfolding of individual titin immunoglobulin domains by AFM. Science 276 5315 (1997) 1109-1112
-
(1997)
Science
, vol.276
, Issue.5315
, pp. 1109-1112
-
-
Rief, M.1
-
233
-
-
0033523904
-
Mechanical unfolding intermediates in titin modules
-
Marszalek P.E., et al. Mechanical unfolding intermediates in titin modules. Nature 402 6757 (1999) 100-103
-
(1999)
Nature
, vol.402
, Issue.6757
, pp. 100-103
-
-
Marszalek, P.E.1
-
234
-
-
0037066262
-
Force spectroscopy of single biomolecules
-
Matthias Rief H.G. Force spectroscopy of single biomolecules. ChemPhysChem 3 3 (2002) 255-261
-
(2002)
ChemPhysChem
, vol.3
, Issue.3
, pp. 255-261
-
-
Matthias Rief, H.G.1
-
235
-
-
0242363173
-
Energetics of hydrogen bonds in peptides
-
Sheu S.-Y., et al. Energetics of hydrogen bonds in peptides. PNAS 100 22 (2003) 12683-12687
-
(2003)
PNAS
, vol.100
, Issue.22
, pp. 12683-12687
-
-
Sheu, S.-Y.1
-
236
-
-
0037920089
-
Insight into conformational changes of a single alpha-helix peptide molecule through stiffness measurements
-
Kageshima M., et al. Insight into conformational changes of a single alpha-helix peptide molecule through stiffness measurements. Chem Phys Lett 343 1-2 (2001) 77-82
-
(2001)
Chem Phys Lett
, vol.343
, Issue.1-2
, pp. 77-82
-
-
Kageshima, M.1
-
237
-
-
0002492311
-
Stretching the alpha-helix: a direct measure of the hydrogen-bond energy of a single-peptide molecule
-
Lantz M.A., et al. Stretching the alpha-helix: a direct measure of the hydrogen-bond energy of a single-peptide molecule. Chem Phys Lett 315 1-2 (1999) 61-68
-
(1999)
Chem Phys Lett
, vol.315
, Issue.1-2
, pp. 61-68
-
-
Lantz, M.A.1
-
239
-
-
53049094657
-
-
Pareto V. Manual of political economy. New York; 1909.
-
Pareto V. Manual of political economy. New York; 1909.
-
-
-
-
240
-
-
0009223757
-
Theoretical foundation of the 80/20 rule
-
Chen Y.S., Chong P.P., and Tong Y.G. Theoretical foundation of the 80/20 rule. Scientometrics 28 2 (1993) 183-204
-
(1993)
Scientometrics
, vol.28
, Issue.2
, pp. 183-204
-
-
Chen, Y.S.1
Chong, P.P.2
Tong, Y.G.3
-
241
-
-
0040331693
-
Decision criteria consolidation: a theoretical foundation of Pareto principle to Porter's competitive forces
-
Chen J.C.H., Chong P.P., and Chen Y.S. Decision criteria consolidation: a theoretical foundation of Pareto principle to Porter's competitive forces. J Org Comput Electron Commer 11 1 (2001) 1-14
-
(2001)
J Org Comput Electron Commer
, vol.11
, Issue.1
, pp. 1-14
-
-
Chen, J.C.H.1
Chong, P.P.2
Chen, Y.S.3
-
242
-
-
38149146871
-
Mathematical and computer modeling of the pareto principle
-
Chen Y.S., Chong P.P., and Tong M.Y. Mathematical and computer modeling of the pareto principle. Math Comput Model 19 9 (1994) 61-80
-
(1994)
Math Comput Model
, vol.19
, Issue.9
, pp. 61-80
-
-
Chen, Y.S.1
Chong, P.P.2
Tong, M.Y.3
-
243
-
-
58949097134
-
-
Ackbarow T, Buehler MJ. Molecular mechanics of stutter defects in vimentin intermediate filaments. Exp Mech, in press. doi:10.1007/s11340-007-9100-6.
-
Ackbarow T, Buehler MJ. Molecular mechanics of stutter defects in vimentin intermediate filaments. Exp Mech, in press. doi:10.1007/s11340-007-9100-6.
-
-
-
-
244
-
-
33845202460
-
On the mechanics of mother-of-pearl: a key feature in the material hierarchical structure
-
Barthelat F., et al. On the mechanics of mother-of-pearl: a key feature in the material hierarchical structure. J Mech Phys Solids 55 2 (2007) 306-337
-
(2007)
J Mech Phys Solids
, vol.55
, Issue.2
, pp. 306-337
-
-
Barthelat, F.1
-
245
-
-
0031899035
-
Artificial fibrous proteins: a review
-
Heslot H. Artificial fibrous proteins: a review. Biochimie 80 1 (1998) 19-31
-
(1998)
Biochimie
, vol.80
, Issue.1
, pp. 19-31
-
-
Heslot, H.1
-
247
-
-
33847370277
-
Biocatalytic generation of ppy-enzyme-CNT nanocomposite: from network assembly to film growth
-
Cui X.Q., et al. Biocatalytic generation of ppy-enzyme-CNT nanocomposite: from network assembly to film growth. J Phys Chem C 111 5 (2007) 2025-2031
-
(2007)
J Phys Chem C
, vol.111
, Issue.5
, pp. 2025-2031
-
-
Cui, X.Q.1
-
248
-
-
34248219052
-
Polymer nanocomposites for biomedical application
-
Hule R.A., and Pochan D.J. Polymer nanocomposites for biomedical application. MRS Bull 32 4 (2007) 5
-
(2007)
MRS Bull
, vol.32
, Issue.4
, pp. 5
-
-
Hule, R.A.1
Pochan, D.J.2
-
249
-
-
34248158161
-
Polymer nanocomposites
-
Winey K.I., and Vaia R.A. Polymer nanocomposites. MRS Bull 32 4 (2007) 5
-
(2007)
MRS Bull
, vol.32
, Issue.4
, pp. 5
-
-
Winey, K.I.1
Vaia, R.A.2
-
250
-
-
53049110891
-
Engineering nanoscale order into a designed protein fiber
-
Papapostolou D., et al. Engineering nanoscale order into a designed protein fiber. PNAS (2007) 0700801104
-
(2007)
PNAS
, pp. 0700801104
-
-
Papapostolou, D.1
-
251
-
-
1842484779
-
Designing materials for biology and medicine
-
Langer R., and Tirrell D.A. Designing materials for biology and medicine. Nature 428 6982 (2004) 487-492
-
(2004)
Nature
, vol.428
, Issue.6982
, pp. 487-492
-
-
Langer, R.1
Tirrell, D.A.2
-
252
-
-
0032541038
-
Reversible hydrogels from self-assembling artificial proteins
-
Petka W.A., et al. Reversible hydrogels from self-assembling artificial proteins. Science 281 5375 (1998) 389-392
-
(1998)
Science
, vol.281
, Issue.5375
, pp. 389-392
-
-
Petka, W.A.1
-
253
-
-
16844369868
-
Controlled assembly of macromolecular beta-sheet fibrils
-
Smeenk J.M., et al. Controlled assembly of macromolecular beta-sheet fibrils. Angew Chem Int Ed 44 13 (2005) 1968-1971
-
(2005)
Angew Chem Int Ed
, vol.44
, Issue.13
, pp. 1968-1971
-
-
Smeenk, J.M.1
-
254
-
-
33846678796
-
Designer self-assembling peptide materials
-
Zhao X.J., and Zhang S.G. Designer self-assembling peptide materials. Macromol Biosci 7 1 (2007) 13-22
-
(2007)
Macromol Biosci
, vol.7
, Issue.1
, pp. 13-22
-
-
Zhao, X.J.1
Zhang, S.G.2
-
255
-
-
33750269500
-
Molecular designer self-assembling peptides
-
Zhao X.J., and Zhang S.G. Molecular designer self-assembling peptides. Chem Soc Rev 35 11 (2006) 1105-1110
-
(2006)
Chem Soc Rev
, vol.35
, Issue.11
, pp. 1105-1110
-
-
Zhao, X.J.1
Zhang, S.G.2
-
256
-
-
27944495294
-
A classic assembly of nanobiomaterials
-
Mershin A., et al. A classic assembly of nanobiomaterials. Nat Biotechnol 23 11 (2005) 1379-1380
-
(2005)
Nat Biotechnol
, vol.23
, Issue.11
, pp. 1379-1380
-
-
Mershin, A.1
-
257
-
-
53049087726
-
-
Buehler MJ. Rupture mechanics of vimentin intermediate filament tetramers. J Eng Mech (ASCE), in press.
-
Buehler MJ. Rupture mechanics of vimentin intermediate filament tetramers. J Eng Mech (ASCE), in press.
-
-
-
-
258
-
-
0242363173
-
Energetics of hydrogen bonds in peptides
-
Sheu S.Y., et al. Energetics of hydrogen bonds in peptides. Proc Natl Acad Sci USA 100 22 (2003) 12683-12687
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.22
, pp. 12683-12687
-
-
Sheu, S.Y.1
-
259
-
-
53049086253
-
Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of {alpha}-helical and beta-sheet protein domains
-
Ackbarow T., et al. Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of {alpha}-helical and beta-sheet protein domains. Proc Natl Acad Sci (2007) 0705759104
-
(2007)
Proc Natl Acad Sci
, pp. 0705759104
-
-
Ackbarow, T.1
-
260
-
-
33845388999
-
Design of superior spider silk: from nanostructure to mechanical properties
-
Du N., et al. Design of superior spider silk: from nanostructure to mechanical properties. Biophys J 91 12 (2006) 4528-4535
-
(2006)
Biophys J
, vol.91
, Issue.12
, pp. 4528-4535
-
-
Du, N.1
-
261
-
-
0037197885
-
Segmented nanofibers of spider dragline silk: atomic force microscopy and single-molecule force spectroscopy
-
Oroudjev E., et al. Segmented nanofibers of spider dragline silk: atomic force microscopy and single-molecule force spectroscopy. Proc Natl Acad Sci USA 99 (2002) 6460-6465
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 6460-6465
-
-
Oroudjev, E.1
-
262
-
-
0036678028
-
The molecular structure of spider dragline silk: folding and orientation of the protein backbone
-
van Beek J.D., et al. The molecular structure of spider dragline silk: folding and orientation of the protein backbone. Proc Natl Acad Sci USA 99 16 (2002) 10266-10271
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.16
, pp. 10266-10271
-
-
van Beek, J.D.1
-
263
-
-
0031021006
-
Structural studies of spider silk proteins in the fiber
-
Parkhe A.D., et al. Structural studies of spider silk proteins in the fiber. J Mol Recognit 10 1 (1997) 1-6
-
(1997)
J Mol Recognit
, vol.10
, Issue.1
, pp. 1-6
-
-
Parkhe, A.D.1
-
264
-
-
33745685415
-
Spider silk as archetypal protein elastomer
-
Vollrath F., and Porter D. Spider silk as archetypal protein elastomer. Soft Matter 2 5 (2006) 377-385
-
(2006)
Soft Matter
, vol.2
, Issue.5
, pp. 377-385
-
-
Vollrath, F.1
Porter, D.2
-
266
-
-
0028765923
-
Molecular modeling of spider silk elasticity
-
Termonia Y. Molecular modeling of spider silk elasticity. Macromolecules 27 25 (1994) 7378-7381
-
(1994)
Macromolecules
, vol.27
, Issue.25
, pp. 7378-7381
-
-
Termonia, Y.1
-
267
-
-
0042508740
-
The mechanical stability of ubiquitin is linkage dependent
-
Carrion-Vazquez M., et al. The mechanical stability of ubiquitin is linkage dependent. Nat Struct Biol 10 9 (2003) 738-743
-
(2003)
Nat Struct Biol
, vol.10
, Issue.9
, pp. 738-743
-
-
Carrion-Vazquez, M.1
-
268
-
-
0031767965
-
The mechanical stability of immunoglobulin and fibronectin III domains in the muscle protein titin measured by atomic force microscopy
-
Rief M., et al. The mechanical stability of immunoglobulin and fibronectin III domains in the muscle protein titin measured by atomic force microscopy. Biophys J 75 6 (1998) 3008-3014
-
(1998)
Biophys J
, vol.75
, Issue.6
, pp. 3008-3014
-
-
Rief, M.1
-
269
-
-
33644846751
-
Mechanical strength of the titin Z1Z2-telethonin complex
-
Lee E.H., et al. Mechanical strength of the titin Z1Z2-telethonin complex. Structure (London, England: 1993) 14 3 (2006) 497-509
-
(2006)
Structure (London, England: 1993)
, vol.14
, Issue.3
, pp. 497-509
-
-
Lee, E.H.1
-
270
-
-
33746377894
-
Protein misfolding, functional amyloid, and human disease
-
Chiti F., and Dobson C.M. Protein misfolding, functional amyloid, and human disease. Annu Rev Biochem 75 (2006) 333-366
-
(2006)
Annu Rev Biochem
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
271
-
-
0347357617
-
Protein folding and misfolding
-
Dobson C.M. Protein folding and misfolding. Nature 426 6968 (2003) 884-890
-
(2003)
Nature
, vol.426
, Issue.6968
, pp. 884-890
-
-
Dobson, C.M.1
-
272
-
-
0141765883
-
Fabrication of novel biomaterials through molecular self-assembly
-
Zhang S.G. Fabrication of novel biomaterials through molecular self-assembly. Nat Biotechnol 21 10 (2003) 1171-1178
-
(2003)
Nat Biotechnol
, vol.21
, Issue.10
, pp. 1171-1178
-
-
Zhang, S.G.1
-
273
-
-
33846566217
-
Nanoscale mechanical characterisation of amyloid fibrils discovered in a natural adhesive
-
Mostaert A.S., et al. Nanoscale mechanical characterisation of amyloid fibrils discovered in a natural adhesive. J Biol Phys 32 5 (2006) 393-401
-
(2006)
J Biol Phys
, vol.32
, Issue.5
, pp. 393-401
-
-
Mostaert, A.S.1
-
274
-
-
33744795434
-
The materials science of protein aggregation
-
Cox D.L., et al. The materials science of protein aggregation. MRS Bull 30 6 (2005) 452-457
-
(2005)
MRS Bull
, vol.30
, Issue.6
, pp. 452-457
-
-
Cox, D.L.1
-
275
-
-
0035967162
-
Liquid crystalline spinning of spider silk
-
Vollrath F., and Knight D.P. Liquid crystalline spinning of spider silk. Nature 410 6828 (2001) 541-548
-
(2001)
Nature
, vol.410
, Issue.6828
, pp. 541-548
-
-
Vollrath, F.1
Knight, D.P.2
-
276
-
-
0042508741
-
Pulling geometry defines the mechanical resistance of a beta-sheet protein
-
Brockwell D.J., et al. Pulling geometry defines the mechanical resistance of a beta-sheet protein. Nat Struct Biol 10 9 (2003) 731-737
-
(2003)
Nat Struct Biol
, vol.10
, Issue.9
, pp. 731-737
-
-
Brockwell, D.J.1
-
277
-
-
18844398202
-
Mechanically induced titin kinase activation studied by force-probe molecular dynamics simulations
-
Grater F., et al. Mechanically induced titin kinase activation studied by force-probe molecular dynamics simulations. Biophys J 88 2 (2005) 790-804
-
(2005)
Biophys J
, vol.88
, Issue.2
, pp. 790-804
-
-
Grater, F.1
-
278
-
-
33646142064
-
Mechanical resistance of proteins explained using simple molecular models
-
West D.K., et al. Mechanical resistance of proteins explained using simple molecular models. Biophys J 90 1 (2006) 287-297
-
(2006)
Biophys J
, vol.90
, Issue.1
, pp. 287-297
-
-
West, D.K.1
-
279
-
-
0033917135
-
The key event in force-induced unfolding of titin's immunoglobulin domains
-
Lu H., and Schulten K. The key event in force-induced unfolding of titin's immunoglobulin domains. Biophys J 79 1 (2000) 51-65
-
(2000)
Biophys J
, vol.79
, Issue.1
, pp. 51-65
-
-
Lu, H.1
Schulten, K.2
-
280
-
-
1442335006
-
Length preferences and periodicity in beta-strands. Antiparallel edge beta-sheets are more likely to finish in non-hydrogen bonded rings
-
Penel S., et al. Length preferences and periodicity in beta-strands. Antiparallel edge beta-sheets are more likely to finish in non-hydrogen bonded rings. Protein Eng 16 12 (2003) 957-961
-
(2003)
Protein Eng
, vol.16
, Issue.12
, pp. 957-961
-
-
Penel, S.1
-
281
-
-
53049085841
-
Elasticity, strength and resilience: a comparative study on mechanical signatures of α-helix, β-sheet and tropocollagen domains
-
Buehler M.J., and Keten S. Elasticity, strength and resilience: a comparative study on mechanical signatures of α-helix, β-sheet and tropocollagen domains. Nano Research 1 1 (2008) 63-71
-
(2008)
Nano Research
, vol.1
, Issue.1
, pp. 63-71
-
-
Buehler, M.J.1
Keten, S.2
-
283
-
-
0033582763
-
Single molecule force spectroscopy of spectrin repeats: low unfolding forces in helix bundles
-
Rief M., et al. Single molecule force spectroscopy of spectrin repeats: low unfolding forces in helix bundles. J Mol Biol 286 2 (1999) 553-561
-
(1999)
J Mol Biol
, vol.286
, Issue.2
, pp. 553-561
-
-
Rief, M.1
-
284
-
-
0032516205
-
The molecular elasticity of the extracellular matrix protein tenascin
-
Oberhauser A.F., et al. The molecular elasticity of the extracellular matrix protein tenascin. Nature 393 6681 (1998) 181-185
-
(1998)
Nature
, vol.393
, Issue.6681
, pp. 181-185
-
-
Oberhauser, A.F.1
-
285
-
-
0004053611
-
-
John Wiley and Sons, New York
-
Voet D., and Voet J.G. Biochemistry (2004), John Wiley and Sons, New York 1591
-
(2004)
Biochemistry
, pp. 1591
-
-
Voet, D.1
Voet, J.G.2
-
286
-
-
0344736695
-
Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates
-
Gao M., et al. Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates. Proc Natl Acad Sci USA 100 25 (2003) 14784-14789
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.25
, pp. 14784-14789
-
-
Gao, M.1
-
288
-
-
0033531109
-
Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy
-
Merkel R., et al. Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy. Nature 397 6714 (1999) 50-53
-
(1999)
Nature
, vol.397
, Issue.6714
, pp. 50-53
-
-
Merkel, R.1
-
289
-
-
85032428079
-
Stability of adhesion clusters under constant force
-
Erdmann T., and Schwarz U.S. Stability of adhesion clusters under constant force. Phys Rev Lett 92 10 (2004)
-
(2004)
Phys Rev Lett
, vol.92
, Issue.10
-
-
Erdmann, T.1
Schwarz, U.S.2
-
290
-
-
33749036851
-
Breaking bonds in the atomic force microscope: theory and analysis
-
Hanke F., and Kreuzer H.J. Breaking bonds in the atomic force microscope: theory and analysis. Phys Rev E 74 3 (2006)
-
(2006)
Phys Rev E
, vol.74
, Issue.3
-
-
Hanke, F.1
Kreuzer, H.J.2
-
291
-
-
0342350248
-
Dynamic force spectroscopy of molecular adhesion bonds
-
Heymann B., and Grubmuller H. Dynamic force spectroscopy of molecular adhesion bonds. Phys Rev Lett 84 26 (2000) 6126-6129
-
(2000)
Phys Rev Lett
, vol.84
, Issue.26
, pp. 6126-6129
-
-
Heymann, B.1
Grubmuller, H.2
-
292
-
-
0034688856
-
Rupture of multiple parallel molecular bonds under dynamic loading
-
Seifert U. Rupture of multiple parallel molecular bonds under dynamic loading. Phys Rev Lett 84 12 (2000) 2750-2753
-
(2000)
Phys Rev Lett
, vol.84
, Issue.12
, pp. 2750-2753
-
-
Seifert, U.1
-
293
-
-
33744828244
-
Strength of multiple parallel biological bonds
-
Sulchek T., Friddle R.W., and Noy A. Strength of multiple parallel biological bonds. Biophys J 90 12 (2006) 4686-4691
-
(2006)
Biophys J
, vol.90
, Issue.12
, pp. 4686-4691
-
-
Sulchek, T.1
Friddle, R.W.2
Noy, A.3
-
294
-
-
34547673274
-
Mechanical stretching of proteins - a theoretical survey of the Protein Data Bank
-
Sulkowska J.I., and Cieplak M. Mechanical stretching of proteins - a theoretical survey of the Protein Data Bank. J Phys Condens Matter 19 28 (2007)
-
(2007)
J Phys Condens Matter
, vol.19
, Issue.28
-
-
Sulkowska, J.I.1
Cieplak, M.2
-
295
-
-
43449096360
-
Asymptotic strength limit of hydrogen bond assemblies in proteins at vanishing pulling rates
-
Keten S., and Buehler M.J. Asymptotic strength limit of hydrogen bond assemblies in proteins at vanishing pulling rates. Phys Rev Lett 100 19 (2008) 198301
-
(2008)
Phys Rev Lett
, vol.100
, Issue.19
, pp. 198301
-
-
Keten, S.1
Buehler, M.J.2
-
296
-
-
40449091784
-
Geometric confinement governs the rupture strength of H-bond assemblies at a critical length scale
-
Keten S., and Buehler M.J. Geometric confinement governs the rupture strength of H-bond assemblies at a critical length scale. Nano Letters 8 2 (2008) 743-748
-
(2008)
Nano Letters
, vol.8
, Issue.2
, pp. 743-748
-
-
Keten, S.1
Buehler, M.J.2
-
298
-
-
0033214502
-
The study of protein mechanics with the atomic force microscope
-
Fisher T.E., et al. The study of protein mechanics with the atomic force microscope. Trends Biochem Sci 24 10 (1999) 379-384
-
(1999)
Trends Biochem Sci
, vol.24
, Issue.10
, pp. 379-384
-
-
Fisher, T.E.1
-
299
-
-
11544281834
-
Elastically coupled two-level systems as a model for biopolymer extensibility
-
Rief M., Fernandez J.M., and Gaub H.E. Elastically coupled two-level systems as a model for biopolymer extensibility. Phys Rev Lett 81 21 (1998) 4764-4767
-
(1998)
Phys Rev Lett
, vol.81
, Issue.21
, pp. 4764-4767
-
-
Rief, M.1
Fernandez, J.M.2
Gaub, H.E.3
-
300
-
-
0034069612
-
Single-molecule studies of DNA mechanics
-
Bustamante C., et al. Single-molecule studies of DNA mechanics. Curr Opin Struct Biol 10 3 (2000) 279-285
-
(2000)
Curr Opin Struct Biol
, vol.10
, Issue.3
, pp. 279-285
-
-
Bustamante, C.1
-
301
-
-
48049119017
-
-
Keten S, Buehler MJ. Large deformation and fracture mechanics of a beta-helical protein nanotube: atomistic and continuum modeling. Comput Method Appl Mech Eng, 2008. doi:10.1016/j.cma.2007.11.028.
-
Keten S, Buehler MJ. Large deformation and fracture mechanics of a beta-helical protein nanotube: atomistic and continuum modeling. Comput Method Appl Mech Eng, 2008. doi:10.1016/j.cma.2007.11.028.
-
-
-
-
302
-
-
0027918655
-
Unusual structural features in the parallel beta-helix in pectate lyases
-
Yoder M.D., Lietzke S.E., and Jurnak F. Unusual structural features in the parallel beta-helix in pectate lyases. Structure 1 4 (1993) 241-251
-
(1993)
Structure
, vol.1
, Issue.4
, pp. 241-251
-
-
Yoder, M.D.1
Lietzke, S.E.2
Jurnak, F.3
-
303
-
-
2942616602
-
Evidence for assembly of prions with left-handed beta 3-helices into trimers
-
Govaerts C., et al. Evidence for assembly of prions with left-handed beta 3-helices into trimers. Proc Natl Acad Sci USA 101 22 (2004) 8342-8347
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.22
, pp. 8342-8347
-
-
Govaerts, C.1
-
304
-
-
1242340413
-
beta-Helix is a likely core structure of yeast prion Sup35 amyloid fibers
-
Kishimoto A., et al. beta-Helix is a likely core structure of yeast prion Sup35 amyloid fibers. Biochem Biophys Res Commun 315 3 (2004) 739-745
-
(2004)
Biochem Biophys Res Commun
, vol.315
, Issue.3
, pp. 739-745
-
-
Kishimoto, A.1
-
305
-
-
0037117519
-
Amyloid fibers are water-filled nanotubes
-
Perutz M.F., et al. Amyloid fibers are water-filled nanotubes. Proc Natl Acad Sci USA 99 8 (2002) 5591-5595
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.8
, pp. 5591-5595
-
-
Perutz, M.F.1
-
306
-
-
0033865052
-
Review: amyloidogenesis-unquestioned answers and unanswered questions
-
Kisilevsky R. Review: amyloidogenesis-unquestioned answers and unanswered questions. J Struct Biol 130 2-3 (2000) 99-108
-
(2000)
J Struct Biol
, vol.130
, Issue.2-3
, pp. 99-108
-
-
Kisilevsky, R.1
-
307
-
-
0037466613
-
Casting metal nanowires within discrete self-assembled peptide nanotubes
-
Reches M., and Gazit E. Casting metal nanowires within discrete self-assembled peptide nanotubes. Science 300 5619 (2003) 625-627
-
(2003)
Science
, vol.300
, Issue.5619
, pp. 625-627
-
-
Reches, M.1
Gazit, E.2
-
308
-
-
0344490335
-
Conducting nanowires built by controlled self-assembly of amyloid fibers and selective metal deposition
-
Scheibel T., et al. Conducting nanowires built by controlled self-assembly of amyloid fibers and selective metal deposition. Proc Natl Acad Sci USA 100 8 (2003) 4527-4532
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.8
, pp. 4527-4532
-
-
Scheibel, T.1
-
309
-
-
0036041641
-
Amyloidogenic nature of spider silk
-
Kenney J.M., et al. Amyloidogenic nature of spider silk. Eur J Biochem 269 16 (2002) 4159-4163
-
(2002)
Eur J Biochem
, vol.269
, Issue.16
, pp. 4159-4163
-
-
Kenney, J.M.1
-
310
-
-
33947515739
-
Spider silk and amyloid fibrils: a structural comparison
-
Slotta U., et al. Spider silk and amyloid fibrils: a structural comparison. Macromol Biosci 7 2 (2007) 183-188
-
(2007)
Macromol Biosci
, vol.7
, Issue.2
, pp. 183-188
-
-
Slotta, U.1
-
311
-
-
33749413243
-
Explanation for the mechanical strength of amyloid fibrils
-
Fukuma T., Mostaert A.S., and Jarvis S.P. Explanation for the mechanical strength of amyloid fibrils. Tribol Lett 22 3 (2006) 233-237
-
(2006)
Tribol Lett
, vol.22
, Issue.3
, pp. 233-237
-
-
Fukuma, T.1
Mostaert, A.S.2
Jarvis, S.P.3
-
312
-
-
14844327767
-
Reversible mechanical unzipping of amyloid beta-fibrils
-
Kellermayer M.S.Z., et al. Reversible mechanical unzipping of amyloid beta-fibrils. J Biol Chem 280 9 (2005) 8464-8470
-
(2005)
J Biol Chem
, vol.280
, Issue.9
, pp. 8464-8470
-
-
Kellermayer, M.S.Z.1
-
314
-
-
0003513999
-
-
McGraw-Hill, New York, NY, USA
-
Timoshenko S., and Gere J. Theory of elastic stability (1988), McGraw-Hill, New York, NY, USA
-
(1988)
Theory of elastic stability
-
-
Timoshenko, S.1
Gere, J.2
-
315
-
-
0004150063
-
-
Cambridge University Press, Cambridge, UK
-
Boal D. Mechanics of the cell (2001), Cambridge University Press, Cambridge, UK
-
(2001)
Mechanics of the cell
-
-
Boal, D.1
-
316
-
-
12344308151
-
Deformation mechanisms of very long single-wall carbon nanotubes subject to compressive loading
-
Buehler M.J., Kong Y., and Gao H.J. Deformation mechanisms of very long single-wall carbon nanotubes subject to compressive loading. J Eng Mater Technol 126 3 (2004) 245-249
-
(2004)
J Eng Mater Technol
, vol.126
, Issue.3
, pp. 245-249
-
-
Buehler, M.J.1
Kong, Y.2
Gao, H.J.3
-
317
-
-
0038245213
-
Mechanics of elastin: molecular mechanism of biological elasticity and its relationship to contraction
-
Urry D.W., and Parker T.M. Mechanics of elastin: molecular mechanism of biological elasticity and its relationship to contraction. J Muscle Res Cell Motil 23 5-6 (2002) 543-559
-
(2002)
J Muscle Res Cell Motil
, vol.23
, Issue.5-6
, pp. 543-559
-
-
Urry, D.W.1
Parker, T.M.2
-
318
-
-
0032488823
-
Evidence from flagelliform silk cDNA for the structural basis of elasticity and modular nature of spider silks
-
Hayashi C.Y., and Lewis R.V. Evidence from flagelliform silk cDNA for the structural basis of elasticity and modular nature of spider silks. J Mol Biol 275 5 (1998) 773-784
-
(1998)
J Mol Biol
, vol.275
, Issue.5
, pp. 773-784
-
-
Hayashi, C.Y.1
Lewis, R.V.2
-
319
-
-
4544284283
-
Simulation of the mechanical unfolding of ubiquitin: probing different unfolding reaction coordinates by changing the pulling geometry
-
Li P.C., and Makarov D.E. Simulation of the mechanical unfolding of ubiquitin: probing different unfolding reaction coordinates by changing the pulling geometry. J Chem Phys 121 10 (2004) 4826-4832
-
(2004)
J Chem Phys
, vol.121
, Issue.10
, pp. 4826-4832
-
-
Li, P.C.1
Makarov, D.E.2
-
320
-
-
0037203891
-
Structure of the cell-puncturing device of bacteriophage T4
-
Kanamaru S., et al. Structure of the cell-puncturing device of bacteriophage T4. Nature 415 6871 (2002) 553-557
-
(2002)
Nature
, vol.415
, Issue.6871
, pp. 553-557
-
-
Kanamaru, S.1
-
322
-
-
0000035952
-
Liquid crystallinity of natural silk secretions
-
Kerkam K., et al. Liquid crystallinity of natural silk secretions. Nature 349 6310 (1991) 596-598
-
(1991)
Nature
, vol.349
, Issue.6310
, pp. 596-598
-
-
Kerkam, K.1
-
323
-
-
0008201078
-
Fractal geometry - what is it, and what does it do
-
Mandelbrot B.B. Fractal geometry - what is it, and what does it do. Proc R Soc Lond Ser A: Math Phys Eng Sci 423 1864 (1989) 3-16
-
(1989)
Proc R Soc Lond Ser A: Math Phys Eng Sci
, vol.423
, Issue.1864
, pp. 3-16
-
-
Mandelbrot, B.B.1
-
324
-
-
0036961579
-
The role of mechanics in biological and biologically inspired materials
-
Bruck H.A., Evans J.J., and Peterson M.L. The role of mechanics in biological and biologically inspired materials. Exp Mech 42 4 (2002) 361-371
-
(2002)
Exp Mech
, vol.42
, Issue.4
, pp. 361-371
-
-
Bruck, H.A.1
Evans, J.J.2
Peterson, M.L.3
-
326
-
-
21544437922
-
Molecular assessment of the elastic properties of collagen-like homotrimer sequences
-
Vesentini S., et al. Molecular assessment of the elastic properties of collagen-like homotrimer sequences. Biomech Model Mechanobiol 3 4 (2005) 224-234
-
(2005)
Biomech Model Mechanobiol
, vol.3
, Issue.4
, pp. 224-234
-
-
Vesentini, S.1
-
327
-
-
0017390580
-
Phonons and elastic-moduli of collagen and muscle
-
Harley R., et al. Phonons and elastic-moduli of collagen and muscle. Nature 267 5608 (1977) 285-287
-
(1977)
Nature
, vol.267
, Issue.5608
, pp. 285-287
-
-
Harley, R.1
-
328
-
-
0018566616
-
Determination of the elastic-constants of collagen by brillouin light-scattering
-
Cusack S., and Miller A. Determination of the elastic-constants of collagen by brillouin light-scattering. J Mol Biol 135 1 (1979) 39-51
-
(1979)
J Mol Biol
, vol.135
, Issue.1
, pp. 39-51
-
-
Cusack, S.1
Miller, A.2
-
329
-
-
0021770213
-
Localization of flexible sites in thread-like molecules from electron-micrographs - comparison of interstitial, basement-membrane and intima collagens
-
Hofmann H., et al. Localization of flexible sites in thread-like molecules from electron-micrographs - comparison of interstitial, basement-membrane and intima collagens. J Mol Biol 172 3 (1984) 325-343
-
(1984)
J Mol Biol
, vol.172
, Issue.3
, pp. 325-343
-
-
Hofmann, H.1
-
330
-
-
33749642359
-
Micromechanical testing of individual collagen fibrils
-
van der Rijt J.A.J., et al. Micromechanical testing of individual collagen fibrils. Macromol Biosci 6 9 (2006) 697-702
-
(2006)
Macromol Biosci
, vol.6
, Issue.9
, pp. 697-702
-
-
van der Rijt, J.A.J.1
-
331
-
-
33747630320
-
Atomistic and continuum modeling of mechanical properties of collagen: elasticity, fracture, and self-assembly
-
Buehler M.J. Atomistic and continuum modeling of mechanical properties of collagen: elasticity, fracture, and self-assembly. J Mater Res 21 8 (2006) 1947-1961
-
(2006)
J Mater Res
, vol.21
, Issue.8
, pp. 1947-1961
-
-
Buehler, M.J.1
-
332
-
-
33751419052
-
Mesoscale modeling of mechanics of carbon nanotubes: self-assembly, self-folding, and fracture
-
Buehler M.J. Mesoscale modeling of mechanics of carbon nanotubes: self-assembly, self-folding, and fracture. J Mater Res 21 11 (2006) 2855-2869
-
(2006)
J Mater Res
, vol.21
, Issue.11
, pp. 2855-2869
-
-
Buehler, M.J.1
-
333
-
-
0036925591
-
Hierarchical assembly and the onset of banding in fibrous long spacing collagennext term revealed by atomic force microscopy
-
Rainey J.K., Wen C.K., and Goh M.C. Hierarchical assembly and the onset of banding in fibrous long spacing collagennext term revealed by atomic force microscopy. Matrix Biol 21 8 (2002) 647-660
-
(2002)
Matrix Biol
, vol.21
, Issue.8
, pp. 647-660
-
-
Rainey, J.K.1
Wen, C.K.2
Goh, M.C.3
|