-
1
-
-
0022838994
-
The molecular basis of erythrocyte shape
-
Elgsaeter, A., B. T. Stokke, A. Mikkelsen, and D. Branton. 1986. The molecular basis of erythrocyte shape. Science. 234:1217-1223.
-
(1986)
Science
, vol.234
, pp. 1217-1223
-
-
Elgsaeter, A.1
Stokke, B.T.2
Mikkelsen, A.3
Branton, D.4
-
2
-
-
0036045690
-
Pathways and intermediates in forced unfolding of spectrin repeats
-
Altmann, S. M., R. G. Grünberg, P.-F. Lenne, J. Ylänne, A. Raae, K. Herbert, M. Saraste, M. Nilges, and J. K. H. Hörber. 2002. Pathways and intermediates in forced unfolding of spectrin repeats. Structure. 10:1085-1096.
-
(2002)
Structure
, vol.10
, pp. 1085-1096
-
-
Altmann, S.M.1
Grünberg, R.G.2
Lenne, P.-F.3
Ylänne, J.4
Raae, A.5
Herbert, K.6
Saraste, M.7
Nilges, M.8
Hörber, J.K.H.9
-
3
-
-
19444382704
-
Unfolding a linker between helical repeats
-
Ortiz, V., S. O. Nielsen, M. L. Klein, and D. E. Discher. 2005. Unfolding a linker between helical repeats. J. Mol. Biol. 349:638-647.
-
(2005)
J. Mol. Biol.
, vol.349
, pp. 638-647
-
-
Ortiz, V.1
Nielsen, S.O.2
Klein, M.L.3
Discher, D.E.4
-
4
-
-
0034612284
-
Unfolding proteins by external forces and temperature: The importance of topology and energetics
-
Paci, E., and M. Karplus. 2000. Unfolding proteins by external forces and temperature: the importance of topology and energetics. Proc. Natl. Acad. Sci. USA. 97:6521-6526.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6521-6526
-
-
Paci, E.1
Karplus, M.2
-
5
-
-
33646163010
-
Extending a spectrin repeat unit. I: Linear force-extension response
-
Paramore, S., G. S. Ayton, D. T. Mirijanian, and G. A. Voth. 2006. Extending a spectrin repeat unit. I: Linear force-extension response. Biophys. J. 90:92-100.
-
(2006)
Biophys. J.
, vol.90
, pp. 92-100
-
-
Paramore, S.1
Ayton, G.S.2
Mirijanian, D.T.3
Voth, G.A.4
-
6
-
-
33646135074
-
Extending a spectrin repeat unit. II: Rupture behavior
-
Paramore, S., G. S. Ayton, and G. A. Voth. 2006. Extending a spectrin repeat unit. II: Rupture behavior. Biophys. J. 90:101-111.
-
(2006)
Biophys. J.
, vol.90
, pp. 101-111
-
-
Paramore, S.1
Ayton, G.S.2
Voth, G.A.3
-
7
-
-
0033588274
-
Structures of two repeats of spectrin suggest models of flexibility
-
Grum, V. L., D. Li, R. I. MacDonald, and A. Mondragón. 1999. Structures of two repeats of spectrin suggest models of flexibility. Cell. 98:523-535.
-
(1999)
Cell
, vol.98
, pp. 523-535
-
-
Grum, V.L.1
Li, D.2
MacDonald, R.I.3
Mondragón, A.4
-
8
-
-
1842450320
-
Structural insights into the stability and flexibility of unusual erythroid spectrin repeats
-
Kusunoki, H., R. I. MacDonald, and A. Mondragón. 2004. Structural insights into the stability and flexibility of unusual erythroid spectrin repeats. Structure. 12:645-656.
-
(2004)
Structure
, vol.12
, pp. 645-656
-
-
Kusunoki, H.1
MacDonald, R.I.2
Mondragón, A.3
-
9
-
-
7444232111
-
Independent movement, dimerization and stability of tandem repeats of chicken brain α-spectrin
-
Kusunoki, H., G. Minasov, R. I. MacDonald, and A. Mondragón. 2004. Independent movement, dimerization and stability of tandem repeats of chicken brain α-spectrin. J. Mol. Biol. 344:495-511.
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 495-511
-
-
Kusunoki, H.1
Minasov, G.2
MacDonald, R.I.3
Mondragón, A.4
-
10
-
-
1242319561
-
Stabilities of folding of clustered, two-repeat fragments of spectrin reveal a potential hinge in the human erythroid spectrin tetramer
-
MacDonald, R. I., and J. A. Cummings. 2004. Stabilities of folding of clustered, two-repeat fragments of spectrin reveal a potential hinge in the human erythroid spectrin tetramer. Proc. Natl. Acad. Sci. USA. 101:1502-1507.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 1502-1507
-
-
MacDonald, R.I.1
Cummings, J.A.2
-
11
-
-
0035799317
-
Free energies of urea and of thermal unfolding show that two tandem repeats of spectrin are thermodynamically more stable than a single repeat
-
MacDonald, R. I., and E. V. Pozharski. 2001. Free energies of urea and of thermal unfolding show that two tandem repeats of spectrin are thermodynamically more stable than a single repeat. Biochemistry. 40:3974-3984.
-
(2001)
Biochemistry
, vol.40
, pp. 3974-3984
-
-
MacDonald, R.I.1
Pozharski, E.V.2
-
12
-
-
0037216898
-
Cooperativity in forced unfolding of tandem spectrin repeats
-
Law, R., P. Carl, S. Harper, P. Dalhaimer, D. W. Speicher, and D. E. Discher. 2003. Cooperativity in forced unfolding of tandem spectrin repeats. Biophys. J. 84:533-544.
-
(2003)
Biophys. J.
, vol.84
, pp. 533-544
-
-
Law, R.1
Carl, P.2
Harper, S.3
Dalhaimer, P.4
Speicher, D.W.5
Discher, D.E.6
-
13
-
-
1942501650
-
Influence of lateral association on forced unfolding of antiparallel spectrin heterodimers
-
Law, R., S. Harper, D. W. Speicher, and D. E. Discher. 2004. Influence of lateral association on forced unfolding of antiparallel spectrin heterodimers. J. Biol. Chem. 279:16410-16416.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16410-16416
-
-
Law, R.1
Harper, S.2
Speicher, D.W.3
Discher, D.E.4
-
14
-
-
0242353807
-
Pathway shifts and thermal softening in temperature-coupled forced unfolding of spectrin domains
-
Law, R., G. Liao, S. Harper, G. Yang, D. W. Speicher, and D. E. Discher. 2003. Pathway shifts and thermal softening in temperature-coupled forced unfolding of spectrin domains. Biophys. J. 85:3286-3293.
-
(2003)
Biophys. J.
, vol.85
, pp. 3286-3293
-
-
Law, R.1
Liao, G.2
Harper, S.3
Yang, G.4
Speicher, D.W.5
Discher, D.E.6
-
15
-
-
0034617430
-
States and transitions during forced unfolding of a single spectrin repeat
-
Lenne, P.-F., A. J. Raae, S. M. Altmann, M. Saraste, and J. K. H. Hörber. 2000. States and transitions during forced unfolding of a single spectrin repeat. FEBS Lett. 476:124-128.
-
(2000)
FEBS Lett.
, vol.476
, pp. 124-128
-
-
Lenne, P.-F.1
Raae, A.J.2
Altmann, S.M.3
Saraste, M.4
Hörber, J.K.H.5
-
16
-
-
0033582763
-
Single molecule force spectroscopy of spectrin repeats: Low unfolding forces in helix bundles
-
Rief, M., J. Pascual, M. Saraste, and H. E. Gaub. 1999. Single molecule force spectroscopy of spectrin repeats: low unfolding forces in helix bundles. J. Mol. Biol. 286:553-561.
-
(1999)
J. Mol. Biol.
, vol.286
, pp. 553-561
-
-
Rief, M.1
Pascual, J.2
Saraste, M.3
Gaub, H.E.4
-
17
-
-
0030059225
-
Ligand binding: Molecular mechanics calculation of the streptavidin-biotin rupture force
-
Grubmüller, H., B. Heyman, and P. Tavan. 1996. Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force. Science. 271:997-999.
-
(1996)
Science
, vol.271
, pp. 997-999
-
-
Grubmüller, H.1
Heyman, B.2
Tavan, P.3
-
18
-
-
0030987036
-
Molecular dynamics study of unbinding of the avidin-biotin complex
-
Izrailev, S., S. Stepaniants, M. Balsera, Y. Oono, and K. Schulten. 1997. Molecular dynamics study of unbinding of the avidin-biotin complex. Biophys. J. 72:1568-1581.
-
(1997)
Biophys. J.
, vol.72
, pp. 1568-1581
-
-
Izrailev, S.1
Stepaniants, S.2
Balsera, M.3
Oono, Y.4
Schulten, K.5
-
19
-
-
0024483987
-
Primary structure of the brain α-spectrin
-
Wasenius, V.-M., M. Saraste, P. Salvén, M. Erämaa, L. Holm, and V.-P. Lehto. 1989. Primary structure of the brain α-spectrin. J. Cell Biol. 108:79-93.
-
(1989)
J. Cell Biol.
, vol.108
, pp. 79-93
-
-
Wasenius, V.-M.1
Saraste, M.2
Salvén, P.3
Erämaa, M.4
Holm, L.5
Lehto, V.-P.6
-
21
-
-
0031592935
-
Solution structure of the spectrin repeat: A left-handed antiparallel triple-helical coiled-coil
-
Pascual, J., M. Pfuhl, D. Walther, M. Saraste, and M. Nilges. 1997. Solution structure of the spectrin repeat: a left-handed antiparallel triple-helical coiled-coil. J. Mol. Biol. 273:740-751.
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 740-751
-
-
Pascual, J.1
Pfuhl, M.2
Walther, D.3
Saraste, M.4
Nilges, M.5
-
22
-
-
0027749280
-
Crystal structure of the repetitive segments of spectrin
-
Yan, Y., E. Winograd, A. Viel, T. Cronin, S. C. Harrison, and D. Branton. 1993. Crystal structure of the repetitive segments of spectrin. Science. 262:2027-2030.
-
(1993)
Science
, vol.262
, pp. 2027-2030
-
-
Yan, Y.1
Winograd, E.2
Viel, A.3
Cronin, T.4
Harrison, S.C.5
Branton, D.6
-
23
-
-
0026510756
-
Analysis of the three-α-helix motif in the spectrin superfamily of proteins
-
Parry, D. A. D., T. W. Dixon, and C. Cohen. 1992. Analysis of the three-α-helix motif in the spectrin superfamily of proteins. Biophys. J. 61:858-867.
-
(1992)
Biophys. J.
, vol.61
, pp. 858-867
-
-
Parry, D.A.D.1
Dixon, T.W.2
Cohen, C.3
-
24
-
-
0033573912
-
Forced unfolding of the fibronectin type III module reveals a tensile molecular recognition switch
-
Krammer, A., H. Lu, B. Isralewitz, and V. Vogel. 1999. Forced unfolding of the fibronectin type III module reveals a tensile molecular recognition switch. Proc. Natl. Acad. Sci. USA. 96:1351-1356.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 1351-1356
-
-
Krammer, A.1
Lu, H.2
Isralewitz, B.3
Vogel, V.4
-
25
-
-
0031848099
-
Unfolding titin immunoglobulin domains by steered molecular dynamics simulation
-
Lu, H., B. Isralewitz, A. Krammer, V. Vogel, and K. Schulten. 1998. Unfolding titin immunoglobulin domains by steered molecular dynamics simulation. Biophys. J. 75:662-671.
-
(1998)
Biophys. J.
, vol.75
, pp. 662-671
-
-
Lu, H.1
Isralewitz, B.2
Krammer, A.3
Vogel, V.4
Schulten, K.5
-
26
-
-
0033151955
-
Steered molecular dynamics simulations of force-induced protein domain unfolding
-
Lu, H., and K. Schulten. 1999. Steered molecular dynamics simulations of force-induced protein domain unfolding. Proteins. 35:453-463.
-
(1999)
Proteins
, vol.35
, pp. 453-463
-
-
Lu, H.1
Schulten, K.2
-
27
-
-
0033917135
-
The key event in force-induced unfolding of titin's immunoglobulin domains
-
Lu, H., and K. Schulten. 2000. The key event in force-induced unfolding of titin's immunoglobulin domains. Biophys. J. 79:51-65.
-
(2000)
Biophys. J.
, vol.79
, pp. 51-65
-
-
Lu, H.1
Schulten, K.2
-
28
-
-
0032516205
-
The molecular elasticity of the extracellular matrix protein tenascin
-
Oberhauser, A. F., P. E. Marszalek, H. P. Erickson, and J. M. Fernandez. 1998. The molecular elasticity of the extracellular matrix protein tenascin. Nature. 393:181-185.
-
(1998)
Nature
, vol.393
, pp. 181-185
-
-
Oberhauser, A.F.1
Marszalek, P.E.2
Erickson, H.P.3
Fernandez, J.M.4
-
29
-
-
0033531973
-
Forced unfolding of fibronectin type 3 modules: An analysis by biased molecular dynamics simulations
-
Paci, E., and M. Karplus. 1999. Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations. J. Mol. Biol. 288:441-459.
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 441-459
-
-
Paci, E.1
Karplus, M.2
-
30
-
-
0031011695
-
Reversible unfolding of individual titin immunoglobulin domains by AFM
-
Rief, M., M. Gautel, F. Oesterhelt, J. M. Fernandez, and H. E. Gaub. 1997. Reversible unfolding of individual titin immunoglobulin domains by AFM. Science. 276:1109-1112.
-
(1997)
Science
, vol.276
, pp. 1109-1112
-
-
Rief, M.1
Gautel, M.2
Oesterhelt, F.3
Fernandez, J.M.4
Gaub, H.E.5
-
31
-
-
0031767965
-
The mechanical stability of immunoglobulin and fibronectin III domains in the muscle protein titin measured by atomic force microscopy
-
Rief, M., M. Gautel, A. Schemmel, and H. E. Gaub. 1998. The mechanical stability of immunoglobulin and fibronectin III domains in the muscle protein titin measured by atomic force microscopy. Biophys. J. 75:3008-3014.
-
(1998)
Biophys. J.
, vol.75
, pp. 3008-3014
-
-
Rief, M.1
Gautel, M.2
Schemmel, A.3
Gaub, H.E.4
-
32
-
-
0042415783
-
NAMD2: Greater scalability for parallel molecular dynamics
-
Kale, L., R. Skeel, M. Bhandarkar, R. Brunner, A. Gursoy, N. Krawetz, J. Phillips, A. Shinozaki, K. Varadarajan, and K. Schulten. 1999. NAMD2: greater scalability for parallel molecular dynamics. J. Comput. Phys. 151:283-312.
-
(1999)
J. Comput. Phys.
, vol.151
, pp. 283-312
-
-
Kale, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
33
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell, A. D. Jr., D. Bashford, M. Bellott, R. L. Dunbrack Jr., J. D. Evanseck, M. J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph-McCarthy, L. Kuchnir, K. Kuczera, F. T. K. Lau, C. Mattos, S. Michnick, T. Ngo, D. T. Nguyen, B. Prodhom, W. E. Reiher 3rd, B. Roux, M. Schlenkrich, J. C. Smith, R. Stote, J. Straub, M. Watanabe, J. Wiorkiewicz-Kuczera, D. Yin, and M. Karplus. 1998. All-atom empirical potential for molecular modeling and dynamics studies of proteins. J. Phys. Chem. B. 102:3586-3616.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph-McCarthy, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher III, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.C.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.29
more..
-
34
-
-
85030594119
-
-
Reference deleted in proof
-
Reference deleted in proof.
-
-
-
-
35
-
-
0033588277
-
Structure of the α-actinin rod: Molecular basis for cross-linking of actin filaments
-
Djinović-Carugo, K., P. Young, M. Gautel, and M. Saraste. 1999. Structure of the α-actinin rod: molecular basis for cross-linking of actin filaments. Cell. 98:537-546.
-
(1999)
Cell
, vol.98
, pp. 537-546
-
-
Djinović-Carugo, K.1
Young, P.2
Gautel, M.3
Saraste, M.4
-
36
-
-
0034933167
-
Crystal structure of the α-actinin rod reveals an extensive torsional twist
-
Ylänne, J., K. Scheffzek, P. Young, and M. Saraste. 2001. Crystal structure of the α-actinin rod reveals an extensive torsional twist. Structure. 9:597-604.
-
(2001)
Structure
, vol.9
, pp. 597-604
-
-
Ylänne, J.1
Scheffzek, K.2
Young, P.3
Saraste, M.4
-
38
-
-
0030040323
-
Reduced surface: An efficient way to compute molecular surfaces
-
Sanner, M. F., J.-C. Spehner, and A. J. Olson. 1996. Reduced surface: an efficient way to compute molecular surfaces. Biopolymers. 38:305-320.
-
(1996)
Biopolymers
, vol.38
, pp. 305-320
-
-
Sanner, M.F.1
Spehner, J.-C.2
Olson, A.J.3
-
39
-
-
12944249776
-
A discussion of the solution for the best rotation to relate two sets of vectors
-
Kabsch, W. 1978. A discussion of the solution for the best rotation to relate two sets of vectors. Acta Crystallogr. A34:827-828.
-
(1978)
Acta Crystallogr.
, vol.A34
, pp. 827-828
-
-
Kabsch, W.1
-
40
-
-
7044226061
-
The folding of spectrin domains I: Wild-type domains have the same stability but very different kinetic properties
-
Scott, K. A., S. Batey, K. A. Hooton, and J. Clarke. 2004. The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties. J. Mol. Biol. 344:195-205.
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 195-205
-
-
Scott, K.A.1
Batey, S.2
Hooton, K.A.3
Clarke, J.4
-
41
-
-
22444436625
-
Spectrin R16: Broad energy barrier or sequential transition states?
-
Scott, K. A., and J. Clarke. 2005. Spectrin R16: broad energy barrier or sequential transition states? Protein Sci. 14:1617-1629.
-
(2005)
Protein Sci.
, vol.14
, pp. 1617-1629
-
-
Scott, K.A.1
Clarke, J.2
-
42
-
-
7044222120
-
The folding of spectrin domains II: Phi-value analysis of R16
-
Scott, K. A., L. G. Randles, and J. Clarke. 2004. The folding of spectrin domains II: phi-value analysis of R16. J. Mol. Biol. 344:207-221.
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 207-221
-
-
Scott, K.A.1
Randles, L.G.2
Clarke, J.3
-
43
-
-
0038650860
-
Kinetics from nonequilibrium single-molecule pulling experiments
-
Hummer, G., and A. Szabo. 2003. Kinetics from nonequilibrium single-molecule pulling experiments. Biophys. J. 85:5-15.
-
(2003)
Biophys. J.
, vol.85
, pp. 5-15
-
-
Hummer, G.1
Szabo, A.2
|