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University of Alberta1
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4
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Phenol-Explorer 3.0: a major update of the Phenol-Explorer database to incorporate data on the effects of food processing on polyphenol content
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Rothwell, J.A., Perez-Jimenez, J., Neveu, V., Medina-Remon, A., M'Hiri, N., Garcia-Lobato, P., Manach, C., Knox, C., Eisner, R., Wishart, D.S., et al. Phenol-Explorer 3.0: a major update of the Phenol-Explorer database to incorporate data on the effects of food processing on polyphenol content. Database (Oxford) 2013, 2013, bat070.
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Manach, C.7
Knox, C.8
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Wishart, D.S.10
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5
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85028397156
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Reprint of: Application of mass spectrometry-based metabolomics approaches for food safety, quality and traceability
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Castro-Puyana, M., Pérez-Míguez, R., Montero, L., Herrero, M., Reprint of: Application of mass spectrometry-based metabolomics approaches for food safety, quality and traceability. TrAC Trends Anal Chem 96 (2017), 62–78.
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Castro-Puyana, M.1
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6
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84942531928
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Food metabolomics: from farm to human
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Kim, S., Kim, J., Yun, E.J., Kim, K.H., Food metabolomics: from farm to human. Curr Opin Biotechnol 37 (2016), 16–23.
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Kim, S.1
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NMR-based milk metabolomics
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Sundekilde, U.K., Larsen, L.B., Bertram, H.C., NMR-based milk metabolomics. Metabolites 3 (2013), 204–222.
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Metabolites
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Sundekilde, U.K.1
Larsen, L.B.2
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8
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85042456922
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Metabolic footprinting of fermented milk consumption in serum of healthy men
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Pimentel, G., Burton, K.J., von Ah, U., Bütikofer, U., Pralong, F.P., Vionnet, N., Portmann, R., Vergères, G., Metabolic footprinting of fermented milk consumption in serum of healthy men. J Nutr, 2017.
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J Nutr
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Pimentel, G.1
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von Ah, U.3
Bütikofer, U.4
Pralong, F.P.5
Vionnet, N.6
Portmann, R.7
Vergères, G.8
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9
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85028773522
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Identification of urinary food intake biomarkers for milk, cheese, and soy-based drink by untargeted GC-MS and NMR in healthy humans
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Munger, L.H., Trimigno, A., Picone, G., Freiburghaus, C., Pimentel, G., Burton, K.J., Pralong, F.P., Vionnet, N., Capozzi, F., Badertscher, R., et al. Identification of urinary food intake biomarkers for milk, cheese, and soy-based drink by untargeted GC-MS and NMR in healthy humans. J Proteome Res 16 (2017), 3321–3335.
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Munger, L.H.1
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Burton, K.J.6
Pralong, F.P.7
Vionnet, N.8
Capozzi, F.9
Badertscher, R.10
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10
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85028016734
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Peptidomic as a tool for assessing protein digestion
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Dupont, D., Peptidomic as a tool for assessing protein digestion. Curr Opin Food Sci 16 (2017), 53–58.
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11
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84905050245
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Tracking the in vivo release of bioactive peptides in the gut during digestion: mass spectrometry peptidomic characterization of effluents collected in the gut of dairy matrix fed mini-pigs
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Barbe, F., Le Feunteun, S., Remond, D., Menard, O., Jardin, J., Henry, G., Laroche, B., Dupont, D., Tracking the in vivo release of bioactive peptides in the gut during digestion: mass spectrometry peptidomic characterization of effluents collected in the gut of dairy matrix fed mini-pigs. Food Res Int 63 (2014), 147–156.
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Barbe, F.1
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12
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84878393788
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Sequential release of milk protein-derived bioactive peptides in the jejunum in healthy humans
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Boutrou, R., Gaudichon, C., Dupont, D., Jardin, J., Airinei, G., Marsset-Baglieri, A., Benamouzig, R., Tome, D., Leonil, J., Sequential release of milk protein-derived bioactive peptides in the jejunum in healthy humans. Am J Clin Nutr 97 (2013), 1314–1323.
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13
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85021686257
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Protein degradation and peptide release from milk proteins in human jejunum. Comparison with in vitro gastrointestinal simulation
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Sanchon, J., Fernandez-Tome, S., Miralles, B., Hernandez-Ledesma, B., Tome, D., Gaudichon, C., Recio, I., Protein degradation and peptide release from milk proteins in human jejunum. Comparison with in vitro gastrointestinal simulation. Food Chem 239 (2018), 486–494.
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Sanchon, J.1
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14
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85038129572
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Differential impact of the cheese matrix on the postprandial lipid response: a randomized, crossover, controlled trial
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Drouin-Chartier, J.P., Tremblay, A.J., Maltais-Giguere, J., Charest, A., Guinot, L., Rioux, L.E., Labrie, S., Britten, M., Lamarche, B., Turgeon, S.L., et al. Differential impact of the cheese matrix on the postprandial lipid response: a randomized, crossover, controlled trial. Am J Clin Nutr 106 (2017), 1358–1365.
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Drouin-Chartier, J.P.1
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15
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84967000307
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Impact of pasteurization of human milk on preterm newborn in vitro digestion: gastrointestinal disintegration, lipolysis and proteolysis
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de Oliveira, S.C., Bourlieu, C., Ménard, O., Bellanger, A., Henry, G., Rousseau, F., Dirson, E., Carrière, F., Dupont, D., Deglaire, A., Impact of pasteurization of human milk on preterm newborn in vitro digestion: gastrointestinal disintegration, lipolysis and proteolysis. Food Chem 211 (2016), 171–179.
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de Oliveira, S.C.1
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Henry, G.5
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Dirson, E.7
Carrière, F.8
Dupont, D.9
Deglaire, A.10
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16
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Holder pasteurization impacts the proteolysis, lipolysis and disintegration of human milk under in vitro dynamic term newborn digestion
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de Oliveira, S.C., Deglaire, A., Menard, O., Bellanger, A., Rousseau, F., Henry, G., Dirson, E., Carriere, F., Dupont, D., Bourlieu, C., Holder pasteurization impacts the proteolysis, lipolysis and disintegration of human milk under in vitro dynamic term newborn digestion. Food Res Int 88 (2016), 263–275.
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de Oliveira, S.C.1
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17
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Impact of human milk pasteurization on gastric digestion in preterm infants: a randomized controlled trial
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de Oliveira, S.C., Bellanger, A., Ménard, O., Pladys, P., Le Gouar, Y., Dirson, E., Kroell, F., Dupont, D., Deglaire, A., Bourlieu, C., Impact of human milk pasteurization on gastric digestion in preterm infants: a randomized controlled trial. Am J Clin Nutr 105 (2017), 379–390.
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de Oliveira, S.C.1
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18
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de Oliveira, S.C., Bellanger, A., Menard, O., Pladys, P., Le Gouar, Y., Henry, G., Dirson, E., Rousseau, F., Carriere, F., Dupont, D., et al. Impact of homogenization of pasteurized human milk on gastric digestion in the preterm infant: a randomized controlled trial. Clin Nutr, 2017.
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de Oliveira, S.C.1
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Dirson, E.7
Rousseau, F.8
Carriere, F.9
Dupont, D.10
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19
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84924956064
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Metabolomics investigation to shed light on cheese as a possible piece in the French paradox puzzle
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This study investigated the metabolic footprint of high cheese or high milk intake in urine and feces samples of healthy men. Using NMR-based metabolomics, host and microbiota derived compounds were detected after 14 days intake of cheese or milk, and are discussed in light of the reported health benefits of dairy intake.
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Zheng, H., Yde, C.C., Clausen, M.R., Kristensen, M., Lorenzen, J., Astrup, A., Bertram, H.C., Metabolomics investigation to shed light on cheese as a possible piece in the French paradox puzzle. J Agric Food Chem 63 (2015), 2830–2839 This study investigated the metabolic footprint of high cheese or high milk intake in urine and feces samples of healthy men. Using NMR-based metabolomics, host and microbiota derived compounds were detected after 14 days intake of cheese or milk, and are discussed in light of the reported health benefits of dairy intake.
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J Agric Food Chem
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Zheng, H.1
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Astrup, A.6
Bertram, H.C.7
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20
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Beaumont, M., Portune, K.J., Steuer, N., Lan, A., Cerrudo, V., Audebert, M., Dumont, F., Mancano, G., Khodorova, N., Andriamihaja, M., et al. Quantity and source of dietary protein influence metabolite production by gut microbiota and rectal mucosa gene expression: a randomized, parallel, double-blind trial in overweight humans. Am J Clin Nutr, 2017.
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Beaumont, M.1
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21
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Xie, G., Zhong, W., Zheng, X., Li, Q., Qiu, Y., Li, H., Chen, H., Zhou, Z., Jia, W., Chronic ethanol consumption alters mammalian gastrointestinal content metabolites. J Proteome Res 12 (2013), 3297–3306.
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22
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Verbeke, K.A., Boobis, A.R., Chiodini, A., Edwards, C.A., Franck, A., Kleerebezem, M., Nauta, A., Raes, J., van Tol, E.A., Tuohy, K.M., Towards microbial fermentation metabolites as markers for health benefits of prebiotics. Nutr Res Rev 28 (2015), 42–66.
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Nauta, A.7
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van Tol, E.A.9
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23
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Using the list of reported intestinal bacteria in human with the KEGG Enzyme and Orthology databases, the authors constructed, in silico, a reaction network model of gut microbiota metabolism. The model was then use to predict microbial products of aromatic amino acids metabolism. The presence of the predicted compounds was then investigated in mice fecal samples using targeted metabolomics analysis, and their bioactivity using cellular model.
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Sridharan, G.V., Choi, K., Klemashevich, C., Wu, C., Prabakaran, D., Pan, L.B., Steinmeyer, S., Mueller, C., Yousofshahi, M., Alaniz, R.C., et al. Prediction and quantification of bioactive microbiota metabolites in the mouse gut. Nat Commun, 5, 2014, 5492 Using the list of reported intestinal bacteria in human with the KEGG Enzyme and Orthology databases, the authors constructed, in silico, a reaction network model of gut microbiota metabolism. The model was then use to predict microbial products of aromatic amino acids metabolism. The presence of the predicted compounds was then investigated in mice fecal samples using targeted metabolomics analysis, and their bioactivity using cellular model.
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Sridharan, G.V.1
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Morrison, D.J., Preston, T., Formation of short chain fatty acids by the gut microbiota and their impact on human metabolism. Gut Microbes 7 (2016), 189–200.
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Impact of dietary polydextrose fiber on the human gut metabolome
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Lamichhane, S., Yde, C.C., Forssten, S., Ouwehand, A.C., Saarinen, M., Jensen, H.M., Gibson, G.R., Rastall, R., Fava, F., Bertram, H.C., Impact of dietary polydextrose fiber on the human gut metabolome. J Agric Food Chem 62 (2014), 9944–9951.
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Lamichhane, S.1
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27
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Cuervo, A., Salazar, N., Ruas-Madiedo, P., Gueimonde, M., González, S., Fiber from a regular diet is directly associated with fecal short-chain fatty acid concentrations in the elderly. Nutr Res 33 (2013), 811–816.
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A targeted metabolomic protocol for short-chain fatty acids and branched-chain amino acids
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Zheng, X., Qiu, Y., Zhong, W., Baxter, S., Su, M., Li, Q., Xie, G., Ore, B.M., Qiao, S., Spencer, M.D., et al. A targeted metabolomic protocol for short-chain fatty acids and branched-chain amino acids. Metabolomics 9 (2013), 818–827.
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In vitro characterization of the impact of different substrates on metabolite production, energy extraction and composition of gut microbiota from lean and obese subjects
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Aguirre, M., Jonkers, D.M.A.E., Troost, F.J., Roeselers, G., Venema, K., In vitro characterization of the impact of different substrates on metabolite production, energy extraction and composition of gut microbiota from lean and obese subjects. PLoS ONE, 9, 2014, e113864.
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30
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84884671077
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A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice
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The authors used germ free mice colonized with microbiota from different human donors and then fed with custom diets to evaluate the responsiveness of the intestinal microbiota. Microbiota derived metabolites were assessed in urine and fecal samples using mass spectrometry-based metabolomics.
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Marcobal, A., Kashyap, P.C., Nelson, T.A., Aronov, P.A., Donia, M.S., Spormann, A., Fischbach, M.A., Sonnenburg, J.L., A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice. ISME J 7 (2013), 1933–1943 The authors used germ free mice colonized with microbiota from different human donors and then fed with custom diets to evaluate the responsiveness of the intestinal microbiota. Microbiota derived metabolites were assessed in urine and fecal samples using mass spectrometry-based metabolomics.
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Marcobal, A.1
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Neis, E.P.J.G., Dejong, C.H.C., Rensen, S.S., The role of microbial amino acid metabolism in host metabolism. Nutrients 7 (2015), 2930–2946.
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Borges, G., van der Hooft, J.J.J., Crozier, A., A comprehensive evaluation of the [2-14C](−)-epicatechin metabolome in rats. Free Radic Biol Med 99 (2016), 128–138.
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David, L.A., Maurice, C.F., Carmody, R.N., Gootenberg, D.B., Button, J.E., Wolfe, B.E., Ling, A.V., Devlin, A.S., Varma, Y., Fischbach, M.A., et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature, 505, 2014, 559.
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McNulty, N.P., Wu, M., Erickson, A.R., Pan, C.L., Erickson, B.K., Martens, E.C., Pudlo, N.A., Muegge, B.D., Henrissat, B., Hettich, R.L., et al. Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome. PLoS Biol, 2013, 11.
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