Transcriptome-wide identification of NMD-targeted human mRNAs reveals extensive redundancy between SMG6- and SMG7-mediated degradation pathways

RNA

Volumn 23, Issue 2, 2017, Pages 189-201

  Colombo, Martino ^a   Karousis, Evangelos D ^a   Bourquin, Joël ^a,b   Bruggmann, Rémy ^a   Mühlemann, Oliver ^a  

^a UNIVERSITY OF BERN   (Switzerland)

^b UNIVERSITY OF FRIBOURG   (Switzerland)

Author keywords

Bioinformatics analysis; MRNA seq; Nonsense mediated mRNA decay; Post transcriptional gene regulation; RNA turnover; SMG6; SMG7; UPF1

Indexed keywords

LONG UNTRANSLATED RNA; MESSENGER RNA; MICRORNA; SMALL NUCLEOLAR RNA; TRANSCRIPTOME; CARRIER PROTEIN; PROTEIN BINDING; SMALL INTERFERING RNA; SMG6 PROTEIN, HUMAN; SMG7 PROTEIN, HUMAN; STOP CODON; TELOMERASE; TRANSACTIVATOR PROTEIN; UPF1 PROTEIN, HUMAN;

3' UNTRANSLATED REGION; ARTICLE; CONTROLLED STUDY; DNA BASE COMPOSITION; HUMAN; HUMAN CELL; NONSENSE MEDIATED MRNA DECAY; OPEN READING FRAME; PREDICTIVE VALUE; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; RNA TRANSCRIPTION; ANTAGONISTS AND INHIBITORS; CHEMISTRY; GENE EXPRESSION; GENETICS; HELA CELL LINE; INTRON; METABOLISM; STOP CODON;

BASE COMPOSITION; CARRIER PROTEINS; CODON, NONSENSE; GENE EXPRESSION; HELA CELLS; HUMANS; INTRONS; MICRORNAS; NONSENSE MEDIATED MRNA DECAY; PROTEIN BINDING; RNA, LONG NONCODING; RNA, MESSENGER; RNA, SMALL INTERFERING; RNA, SMALL NUCLEOLAR; TELOMERASE; TRANS-ACTIVATORS; TRANSCRIPTOME;

EID: 85011092575     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.059055.116     Document Type: Article

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