-
1
-
-
0033213720
-
Replisome assembly at oriC, the replication origin of E. Coli, reveals an explanation for initiation sites outside an origin
-
CrossRef]
-
Fang, L.; Davey, M.J.; O’Donnell, M. Replisome assembly at oriC, the replication origin of E. coli, reveals an explanation for initiation sites outside an origin. Mol. Cell 1999, 4, 541-553. [CrossRef]
-
(1999)
Mol. Cell
, vol.4
, pp. 541-553
-
-
Fang, L.1
Davey, M.J.2
O’Donnell, M.3
-
2
-
-
34047149973
-
Replisome mechanics: Insights into a twin DNA polymerase machine
-
CrossRef] [PubMed]
-
Pomerantz, R.T.; O’Donnell, M. Replisome mechanics: Insights into a twin DNA polymerase machine. Trends Microbiol. 2007, 15, 156-164. [CrossRef] [PubMed]
-
(2007)
Trends Microbiol
, vol.15
, pp. 156-164
-
-
Pomerantz, R.T.1
O’Donnell, M.2
-
3
-
-
15244359893
-
Independence of replisomes in Escherichia coli chromosomal replication
-
CrossRef] [PubMed]
-
Breier, A.M.; Weier, H.-U.G.; Cozzarelli, N.R. Independence of replisomes in Escherichia coli chromosomal replication. Proc. Natl. Acad. Sci. USA 2005, 102, 3942-3947. [CrossRef] [PubMed]
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 3942-3947
-
-
Breier, A.M.1
Weier, H.-U.G.2
Cozzarelli, N.R.3
-
4
-
-
84901617885
-
Mechanism and physiological significance of programmed replication termination
-
CrossRef] [PubMed]
-
Bastia, D.; Zaman, S. Mechanism and physiological significance of programmed replication termination. Semin. Cell Dev. Biol. 2014, 30, 165-173. [CrossRef] [PubMed]
-
(2014)
Semin. Cell Dev. Biol
, vol.30
, pp. 165-173
-
-
Bastia, D.1
Zaman, S.2
-
5
-
-
56749098227
-
The replication fork trap and termination of chromosome replication
-
CrossRef] [PubMed]
-
Duggin, I.G.; Wake, R.G.; Bell, S.D.; Hill, T.M. The replication fork trap and termination of chromosome replication. Mol. Microbiol. 2008, 70, 1323-1333. [CrossRef] [PubMed]
-
(2008)
Mol. Microbiol
, vol.70
, pp. 1323-1333
-
-
Duggin, I.G.1
Wake, R.G.2
Bell, S.D.3
Hill, T.M.4
-
6
-
-
24944550999
-
Replication termination in Escherichia coli: Structure and antihelicase activity of the Tus-Ter complex
-
CrossRef] [PubMed]
-
Neylon, C.; Kralicek, A.V.; Hill, T.M.; Dixon, N.E. Replication termination in Escherichia coli: Structure and antihelicase activity of the Tus-Ter complex. Microbiol. Mol. Biol. Rev. MMBR 2005, 69, 501-526. [CrossRef] [PubMed]
-
(2005)
Microbiol. Mol. Biol. Rev. MMBR
, vol.69
, pp. 501-526
-
-
Neylon, C.1
Kralicek, A.V.2
Hill, T.M.3
Dixon, N.E.4
-
7
-
-
84870214514
-
Chromosome replication and segregation in bacteria
-
CrossRef] [PubMed]
-
Reyes-Lamothe, R.; Nicolas, E.; Sherratt, D.J. Chromosome replication and segregation in bacteria. Annu. Rev. Genet. 2012, 46, 121-143. [CrossRef] [PubMed]
-
(2012)
Annu. Rev. Genet
, vol.46
, pp. 121-143
-
-
Reyes-Lamothe, R.1
Nicolas, E.2
Sherratt, D.J.3
-
8
-
-
0035902589
-
Circles: The replication-recombinationchromosome segregation connection
-
CrossRef] [PubMed]
-
Barre, F.X.; Søballe, B.; Michel, B.; Aroyo, M.; Robertson, M.; Sherratt, D. Circles: The replication-recombinationchromosome segregation connection. Proc. Natl. Acad. Sci. USA 2001, 98, 8189-8195. [CrossRef] [PubMed]
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8189-8195
-
-
Barre, F.X.1
Søballe, B.2
Michel, B.3
Aroyo, M.4
Robertson, M.5
Sherratt, D.6
-
9
-
-
78049300491
-
FtsK DNA translocase: The fast motor that knows where it’s going. Chembiochem
-
CrossRef] [PubMed]
-
Crozat, E.; Grainge, I. FtsK DNA translocase: The fast motor that knows where it’s going. Chembiochem Eur. J. Chem. Biol. 2010, 11, 2232-2243. [CrossRef] [PubMed]
-
(2010)
Eur. J. Chem. Biol
, vol.11
, pp. 2232-2243
-
-
Crozat, E.1
Grainge, I.2
-
10
-
-
84942274889
-
Shaping the landscape of the Escherichia coli chromosome: Replication-transcription encounters in cells with an ectopic replication origin
-
CrossRef] [PubMed]
-
Ivanova, D.; Taylor, T.; Smith, S.L.; Dimude, J.U.; Upton, A.L.; Mehrjouy, M.M.; Skovgaard, O.; Sherratt, D.J.; Retkute, R.; Rudolph, C.J. Shaping the landscape of the Escherichia coli chromosome: Replication-transcription encounters in cells with an ectopic replication origin. Nucleic Acids Res. 2015, 43, 7865-7877. [CrossRef] [PubMed]
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 7865-7877
-
-
Ivanova, D.1
Taylor, T.2
Smith, S.L.3
Dimude, J.U.4
Upton, A.L.5
Mehrjouy, M.M.6
Skovgaard, O.7
Sherratt, D.J.8
Retkute, R.9
Rudolph, C.J.10
-
11
-
-
0023660450
-
The normal replication terminus of the Bacillus subtilis chromosome, terC, is dispensable for vegetative growth and sporulation
-
CrossRef]
-
Iismaa, T.P.; Wake, R.G. The normal replication terminus of the Bacillus subtilis chromosome, terC, is dispensable for vegetative growth and sporulation. J. Mol. Biol. 1987, 195, 299-310. [CrossRef]
-
(1987)
J. Mol. Biol
, vol.195
, pp. 299-310
-
-
Iismaa, T.P.1
Wake, R.G.2
-
12
-
-
0025738333
-
The tus gene of Escherichia coli: Autoregulation, analysis of flanking sequences and identification of a complementary system in Salmonella typhimurium
-
CrossRef]
-
Roecklein, B.; Pelletier, A.; Kuempel, P. The tus gene of Escherichia coli: Autoregulation, analysis of flanking sequences and identification of a complementary system in Salmonella typhimurium. Res. Microbiol. 1991, 142, 169-175. [CrossRef]
-
(1991)
Res. Microbiol
, vol.142
, pp. 169-175
-
-
Roecklein, B.1
Pelletier, A.2
Kuempel, P.3
-
13
-
-
84952815297
-
The consequences of replicating in the wrong orientation: Bacterial chromosome duplication without an active replication origin
-
CrossRef] [PubMed]
-
Dimude, J.U.; Stockum, A.; Midgley-Smith, S.L.; Upton, A.L.; Foster, H.A.; Khan, A.; Saunders, N.J.; Retkute, R.; Rudolph, C.J. The consequences of replicating in the wrong orientation: Bacterial chromosome duplication without an active replication origin. mBio 2015, 6, e01294-15. [CrossRef] [PubMed]
-
(2015)
Mbio
, vol.6
-
-
Dimude, J.U.1
Stockum, A.2
Midgley-Smith, S.L.3
Upton, A.L.4
Foster, H.A.5
Khan, A.6
Saunders, N.J.7
Retkute, R.8
Rudolph, C.J.9
-
14
-
-
67651205866
-
Pathological replication in cells lacking RecG DNA translocase
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Upton, A.L.; Harris, L.; Lloyd, R.G. Pathological replication in cells lacking RecG DNA translocase. Mol. Microbiol. 2009, 73, 352-366. [CrossRef] [PubMed]
-
(2009)
Mol. Microbiol
, vol.73
, pp. 352-366
-
-
Rudolph, C.J.1
Upton, A.L.2
Harris, L.3
Lloyd, R.G.4
-
15
-
-
70449560624
-
Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Upton, A.L.; Lloyd, R.G. Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase. Mol. Microbiol. 2009, 74, 940-955. [CrossRef] [PubMed]
-
(2009)
Mol. Microbiol
, vol.74
, pp. 940-955
-
-
Rudolph, C.J.1
Upton, A.L.2
Lloyd, R.G.3
-
16
-
-
76749090152
-
Is RecG a general guardian of the bacterial genome?
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Upton, A.L.; Briggs, G.S.; Lloyd, R.G. Is RecG a general guardian of the bacterial genome? DNA Repair 2010, 9, 210-223. [CrossRef] [PubMed]
-
(2010)
DNA Repair
, vol.9
, pp. 210-223
-
-
Rudolph, C.J.1
Upton, A.L.2
Briggs, G.S.3
Lloyd, R.G.4
-
17
-
-
78951475725
-
RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Mahdi, A.A.; Upton, A.L.; Lloyd, R.G. RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli. Genetics 2010, 186, 473-492. [CrossRef] [PubMed]
-
(2010)
Genetics
, vol.186
, pp. 473-492
-
-
Rudolph, C.J.1
Mahdi, A.A.2
Upton, A.L.3
Lloyd, R.G.4
-
18
-
-
84883132869
-
Avoiding chromosome pathology when replication forks collide
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Upton, A.L.; Stockum, A.; Nieduszynski, C.A.; Lloyd, R.G. Avoiding chromosome pathology when replication forks collide. Nature 2013, 500, 608-611. [CrossRef] [PubMed]
-
(2013)
Nature
, vol.500
, pp. 608-611
-
-
Rudolph, C.J.1
Upton, A.L.2
Stockum, A.3
Nieduszynski, C.A.4
Lloyd, R.G.5
-
19
-
-
0017660726
-
Terminus region of the chromosome in Escherichia coli inhibits replication forks
-
CrossRef] [PubMed]
-
Kuempel, P.L.; Duerr, S.A.; Seeley, N.R. Terminus region of the chromosome in Escherichia coli inhibits replication forks. Proc. Natl. Acad. Sci. USA 1977, 74, 3927-3931. [CrossRef] [PubMed]
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 3927-3931
-
-
Kuempel, P.L.1
Duerr, S.A.2
Seeley, N.R.3
-
20
-
-
0018150752
-
Chromosome replication in an Escherichia coli dnaA mutant integratively suppressed by prophage P2
-
[PubMed]
-
Kuempel, P.L.; Duerr, S.A.; Maglothin, P.D. Chromosome replication in an Escherichia coli dnaA mutant integratively suppressed by prophage P2. J. Bacteriol. 1978, 134, 902-912. [PubMed]
-
(1978)
J. Bacteriol
, vol.134
, pp. 902-912
-
-
Kuempel, P.L.1
Duerr, S.A.2
Maglothin, P.D.3
-
21
-
-
0017716649
-
Evidence for a fixed termination site of chromosome replication in Escherichia coli K12
-
CrossRef]
-
Louarn, J.; Patte, J.; Louarn, J.M. Evidence for a fixed termination site of chromosome replication in Escherichia coli K12. J. Mol. Biol. 1977, 115, 295-314. [CrossRef]
-
(1977)
J. Mol. Biol
, vol.115
, pp. 295-314
-
-
Louarn, J.1
Patte, J.2
Louarn, J.M.3
-
22
-
-
0023126267
-
The terminus region of the Escherichia coli chromosome contains two separate loci that exhibit polar inhibition of replication
-
CrossRef] [PubMed]
-
Hill, T.M.; Henson, J.M.; Kuempel, P.L. The terminus region of the Escherichia coli chromosome contains two separate loci that exhibit polar inhibition of replication. Proc. Natl. Acad. Sci. USA 1987, 84, 1754-1758. [CrossRef] [PubMed]
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1754-1758
-
-
Hill, T.M.1
Henson, J.M.2
Kuempel, P.L.3
-
23
-
-
0023099783
-
Inhibition of replication forks exiting the terminus region of the Escherichia coli chromosome occurs at two loci separated by 5 min
-
CrossRef] [PubMed]
-
De Massy, B.; Béjar, S.; Louarn, J.; Louarn, J.M.; Bouché, J.P. Inhibition of replication forks exiting the terminus region of the Escherichia coli chromosome occurs at two loci separated by 5 min. Proc. Natl. Acad. Sci. USA 1987, 84, 1759-1763. [CrossRef] [PubMed]
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1759-1763
-
-
De Massy, B.1
Béjar, S.2
Louarn, J.3
Louarn, J.M.4
Bouché, J.P.5
-
24
-
-
0024078006
-
Location of sites that inhibit progression of replication forks in the terminus region of Escherichia coli
-
[PubMed]
-
Pelletier, A.J.; Hill, T.M.; Kuempel, P.L. Location of sites that inhibit progression of replication forks in the terminus region of Escherichia coli. J. Bacteriol. 1988, 170, 4293-4298. [PubMed]
-
(1988)
J. Bacteriol
, vol.170
, pp. 4293-4298
-
-
Pelletier, A.J.1
Hill, T.M.2
Kuempel, P.L.3
-
25
-
-
0023956135
-
Termination of DNA replication in Escherichia coli requires a trans-acting factor
-
[PubMed]
-
Hill, T.M.; Kopp, B.J.; Kuempel, P.L. Termination of DNA replication in Escherichia coli requires a trans-acting factor. J. Bacteriol. 1988, 170, 662-668. [PubMed]
-
(1988)
J. Bacteriol
, vol.170
, pp. 662-668
-
-
Hill, T.M.1
Kopp, B.J.2
Kuempel, P.L.3
-
26
-
-
0024277944
-
A consensus sequence of three DNA replication terminus sites on the E. Coli chromosome is highly homologous to the terR sites of the R6K plasmid
-
CrossRef]
-
Hidaka, M.; Akiyama, M.; Horiuchi, T. A consensus sequence of three DNA replication terminus sites on the E. coli chromosome is highly homologous to the terR sites of the R6K plasmid. Cell 1988, 55, 467-475. [CrossRef]
-
(1988)
Cell
, vol.55
, pp. 467-475
-
-
Hidaka, M.1
Akiyama, M.2
Horiuchi, T.3
-
27
-
-
0026067518
-
Replication terminus site, TerE, on the Escherichia coli chromosome
-
[PubMed]
-
Hidaka, M.; Kobayashi, T.; Horiuchi, T. A newly identified DNA replication terminus site, TerE, on the Escherichia coli chromosome. J. Bacteriol. 1991, 173, 391-393. [PubMed]
-
(1991)
J. Bacteriol
, vol.173
, pp. 391-393
-
-
Hidaka, M.1
Kobayashi, T.2
Horiuchi, T.A.3
Newly Identified, D.4
-
28
-
-
0024277959
-
Identification of the DNA sequence from the
-
CrossRef]
-
Hill, T.M.; Pelletier, A.J.; Tecklenburg, M.L.; Kuempel, P.L. Identification of the DNA sequence from the E. coli terminus region that halts replication forks. Cell 1988, 55, 459-466. [CrossRef]
-
(1988)
E. Coli Terminus Region that Halts Replication Forks. Cell
, vol.55
, pp. 459-466
-
-
Hill, T.M.1
Pelletier, A.J.2
Tecklenburg, M.L.3
Kuempel, P.L.4
-
29
-
-
0026440048
-
Ter F, the sixth identified replication arrest site in Escherichia coli, is located within the rcsC gene
-
[PubMed]
-
Sharma, B.; Hill, T.M. Ter F, the sixth identified replication arrest site in Escherichia coli, is located within the rcsC gene. J. Bacteriol. 1992, 174, 7854-7858. [PubMed]
-
(1992)
J. Bacteriol
, vol.174
, pp. 7854-7858
-
-
Sharma, B.1
Hill, T.M.2
-
31
-
-
62049085766
-
Termination structures in the Escherichia coli chromosome replication fork trap
-
CrossRef] [PubMed]
-
Duggin, I.G.; Bell, S.D. Termination structures in the Escherichia coli chromosome replication fork trap. J. Mol. Biol. 2009, 387, 532-539. [CrossRef] [PubMed]
-
(2009)
J. Mol. Biol
, vol.387
, pp. 532-539
-
-
Duggin, I.G.1
Bell, S.D.2
-
32
-
-
84937729550
-
Strand separation establishes a sustained lock at the Tus-Ter replication fork barrier
-
CrossRef] [PubMed]
-
Berghuis, B.A.; Dulin, D.; Xu, Z.-Q.; van Laar, T.; Cross, B.; Janissen, R.; Jergic, S.; Dixon, N.E.; Depken, M.; Dekker, N.H. Strand separation establishes a sustained lock at the Tus-Ter replication fork barrier. Nat. Chem. Biol. 2015, 11, 579-585. [CrossRef] [PubMed]
-
(2015)
Nat. Chem. Biol
, vol.11
, pp. 579-585
-
-
Berghuis, B.A.1
Dulin, D.2
Xu, Z.-Q.3
Van Laar, T.4
Cross, B.5
Janissen, R.6
Jergic, S.7
Dixon, N.E.8
Depken, M.9
Dekker, N.H.10
-
33
-
-
84942047816
-
Replisome speed determines the efficiency of the Tus-Ter replication termination barrier
-
CrossRef] [PubMed]
-
Elshenawy, M.M.; Jergic, S.; Xu, Z.-Q.; Sobhy, M.A.; Takahashi, M.; Oakley, A.J.; Dixon, N.E.; Hamdan, S.M. Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature 2015, 525, 394-398. [CrossRef] [PubMed]
-
(2015)
Nature
, vol.525
, pp. 394-398
-
-
Elshenawy, M.M.1
Jergic, S.2
Xu, Z.-Q.3
Sobhy, M.A.4
Takahashi, M.5
Oakley, A.J.6
Dixon, N.E.7
Hamdan, S.M.8
-
34
-
-
33745260902
-
A molecular mousetrap determines polarity of termination of DNA replication
-
CrossRef] [PubMed]
-
Mulcair, M.D.; Schaeffer, P.M.; Oakley, A.J.; Cross, H.F.; Neylon, C.; Hill, T.M.; Dixon, N.E. A molecular mousetrap determines polarity of termination of DNA replication in E. coli. Cell 2006, 125, 1309-1319. [CrossRef] [PubMed]
-
(2006)
E. Coli. Cell
, vol.125
, pp. 1309-1319
-
-
Mulcair, M.D.1
Schaeffer, P.M.2
Oakley, A.J.3
Cross, H.F.4
Neylon, C.5
Hill, T.M.6
Dixon, N.E.7
-
35
-
-
0037099681
-
Replication fork collapse at replication terminator sequences
-
CrossRef] [PubMed]
-
Bidnenko, V.; Ehrlich, S.D.; Michel, B. Replication fork collapse at replication terminator sequences. EMBO J. 2002, 21, 3898-3907. [CrossRef] [PubMed]
-
(2002)
EMBO J
, vol.21
, pp. 3898-3907
-
-
Bidnenko, V.1
Ehrlich, S.D.2
Michel, B.3
-
36
-
-
33749173326
-
The Escherichia coli UvrD helicase is essential for Tus removal during recombination-dependent replication restart from Ter sites
-
CrossRef] [PubMed]
-
Bidnenko, V.; Lestini, R.; Michel, B. The Escherichia coli UvrD helicase is essential for Tus removal during recombination-dependent replication restart from Ter sites. Mol. Microbiol. 2006, 62, 382-396. [CrossRef] [PubMed]
-
(2006)
Mol. Microbiol
, vol.62
, pp. 382-396
-
-
Bidnenko, V.1
Lestini, R.2
Michel, B.3
-
37
-
-
4444267632
-
Multiple pathways process stalled replication forks
-
CrossRef] [PubMed]
-
Michel, B.; Grompone, G.; Florès, M.-J.; Bidnenko, V. Multiple pathways process stalled replication forks. Proc. Natl. Acad. Sci. USA 2004, 101, 12783-12788. [CrossRef] [PubMed]
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 12783-12788
-
-
Michel, B.1
Grompone, G.2
Florès, M.-J.3
Bidnenko, V.4
-
38
-
-
84982074338
-
The progression of replication forks at natural replication barriers in live bacteria
-
CrossRef] [PubMed]
-
Moolman, M.C.; Tiruvadi Krishnan, S.; Kerssemakers, J.W.J.; de Leeuw, R.; Lorent, V.; Sherratt, D.J.; Dekker, N.H. The progression of replication forks at natural replication barriers in live bacteria. Nucleic Acids Res. 2016. [CrossRef] [PubMed]
-
(2016)
Nucleic Acids Res
-
-
Moolman, M.C.1
Tiruvadi Krishnan, S.2
Kerssemakers, J.W.J.3
De Leeuw, R.4
Lorent, V.5
Sherratt, D.J.6
Dekker, N.H.7
-
39
-
-
0034811161
-
RecA-mediated rescue of Escherichia coli strains with replication forks arrested at the terminus
-
CrossRef] [PubMed]
-
Maisnier-Patin, S.; Nordström, K.; Dasgupta, S. RecA-mediated rescue of Escherichia coli strains with replication forks arrested at the terminus. J. Bacteriol. 2001, 183, 6065-6073. [CrossRef] [PubMed]
-
(2001)
J. Bacteriol
, vol.183
, pp. 6065-6073
-
-
Maisnier-Patin, S.1
Nordström, K.2
Dasgupta, S.3
-
40
-
-
0028810659
-
Insertion of inverted Ter sites into the terminus region of the Escherichia coli chromosome delays completion of DNA replication and disrupts the cell cycle
-
CrossRef] [PubMed]
-
Sharma, B.; Hill, T.M. Insertion of inverted Ter sites into the terminus region of the Escherichia coli chromosome delays completion of DNA replication and disrupts the cell cycle. Mol. Microbiol. 1995, 18, 45-61. [CrossRef] [PubMed]
-
(1995)
Mol. Microbiol
, vol.18
, pp. 45-61
-
-
Sharma, B.1
Hill, T.M.2
-
41
-
-
84865725040
-
Differential Tus-Ter binding and lock formation: Implications for DNA replication termination in Escherichia coli
-
CrossRef] [PubMed]
-
Moreau, M.J.J.; Schaeffer, P.M. Differential Tus-Ter binding and lock formation: Implications for DNA replication termination in Escherichia coli. Mol. Biosyst. 2012, 8, 2783-2791. [CrossRef] [PubMed]
-
(2012)
Mol. Biosyst
, vol.8
, pp. 2783-2791
-
-
Moreau, M.J.J.1
Schaeffer, P.M.2
-
42
-
-
84891823877
-
The dynamics of genome replication using deep sequencing
-
CrossRef] [PubMed]
-
Müller, C.A.; Hawkins, M.; Retkute, R.; Malla, S.; Wilson, R.; Blythe, M.J.; Nakato, R.; Komata, M.; Shirahige, K.; de Moura, A.P.S., et al. The dynamics of genome replication using deep sequencing. Nucleic Acids Res. 2014, 42, e3. [CrossRef] [PubMed]
-
(2014)
Nucleic Acids Res
, vol.3
, pp. 42
-
-
Müller, C.A.1
Hawkins, M.2
Retkute, R.3
Malla, S.4
Wilson, R.5
Blythe, M.J.6
Nakato, R.7
Komata, M.8
Shirahige, K.9
De Moura, A.P.S.10
-
43
-
-
80051563593
-
Genome-wide detection of chromosomal rearrangements, indels, and mutations in circular chromosomes by short read sequencing
-
CrossRef] [PubMed]
-
Skovgaard, O.; Bak, M.; Løbner-Olesen, A.; Tommerup, N. Genome-wide detection of chromosomal rearrangements, indels, and mutations in circular chromosomes by short read sequencing. Genome Res. 2011, 21, 1388-1393. [CrossRef] [PubMed]
-
(2011)
Genome Res
, vol.21
, pp. 1388-1393
-
-
Skovgaard, O.1
Bak, M.2
Løbner-Olesen, A.3
Tommerup, N.4
-
44
-
-
79960584723
-
Replication and segregation of an Escherichia coli chromosome with two replication origins
-
CrossRef] [PubMed]
-
Wang, X.; Lesterlin, C.; Reyes-Lamothe, R.; Ball, G.; Sherratt, D.J. Replication and segregation of an Escherichia coli chromosome with two replication origins. Proc. Natl. Acad. Sci. USA 2011, 108, E243-E250. [CrossRef] [PubMed]
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. E243-E250
-
-
Wang, X.1
Lesterlin, C.2
Reyes-Lamothe, R.3
Ball, G.4
Sherratt, D.J.5
-
45
-
-
75649142564
-
The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo
-
CrossRef] [PubMed]
-
Boubakri, H.; de Septenville, A.L.; Viguera, E.; Michel, B. The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo. EMBO J. 2010, 29, 145-157. [CrossRef] [PubMed]
-
(2010)
EMBO J
, vol.29
, pp. 145-157
-
-
Boubakri, H.1
De Septenville, A.L.2
Viguera, E.3
Michel, B.4
-
46
-
-
84860578766
-
Replication fork reversal after replication-transcription collision
-
CrossRef] [PubMed]
-
De Septenville, A.L.; Duigou, S.; Boubakri, H.; Michel, B. Replication fork reversal after replication-transcription collision. PLoS Genet. 2012, 8, e1002622. [CrossRef] [PubMed]
-
(2012)
Plos Genet
, vol.8
-
-
De Septenville, A.L.1
Duigou, S.2
Boubakri, H.3
Michel, B.4
-
47
-
-
76749094639
-
Co-orientation of replication and transcription preserves genome integrity
-
CrossRef] [PubMed]
-
Srivatsan, A.; Tehranchi, A.; MacAlpine, D.M.; Wang, J.D. Co-orientation of replication and transcription preserves genome integrity. PLoS Genet. 2010, 6, e1000810. [CrossRef] [PubMed]
-
(2010)
Plos Genet
, vol.6
-
-
Srivatsan, A.1
Tehranchi, A.2
Macalpine, D.M.3
Wang, J.D.4
-
48
-
-
34248394295
-
Genome-wide coorientation of replication and transcription reduces adverse effects on replication in Bacillus subtilis
-
CrossRef] [PubMed]
-
Wang, J.D.; Berkmen, M.B.; Grossman, A.D. Genome-wide coorientation of replication and transcription reduces adverse effects on replication in Bacillus subtilis. Proc. Natl. Acad. Sci. USA 2007, 104, 5608-5613. [CrossRef] [PubMed]
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 5608-5613
-
-
Wang, J.D.1
Berkmen, M.B.2
Grossman, A.D.3
-
49
-
-
80052008241
-
Linking RNA polymerase backtracking to genome instability in E. Coli
-
CrossRef] [PubMed]
-
Dutta, D.; Shatalin, K.; Epshtein, V.; Gottesman, M.E.; Nudler, E. Linking RNA polymerase backtracking to genome instability in E. coli. Cell 2011, 146, 533-543. [CrossRef] [PubMed]
-
(2011)
Cell
, vol.146
, pp. 533-543
-
-
Dutta, D.1
Shatalin, K.2
Epshtein, V.3
Gottesman, M.E.4
Nudler, E.5
-
50
-
-
22544464455
-
RNA polymerase modulators and DNA repair activities resolve conflicts between DNA replication and transcription
-
CrossRef] [PubMed]
-
Trautinger, B.W.; Jaktaji, R.P.; Rusakova, E.; Lloyd, R.G. RNA polymerase modulators and DNA repair activities resolve conflicts between DNA replication and transcription. Mol. Cell 2005, 19, 247-258. [CrossRef] [PubMed]
-
(2005)
Mol. Cell
, vol.19
, pp. 247-258
-
-
Trautinger, B.W.1
Jaktaji, R.P.2
Rusakova, E.3
Lloyd, R.G.4
-
51
-
-
84891145437
-
Replication of the Escherichia coli chromosome in RNase HI-deficient cells: Multiple initiation regions and fork dynamics
-
CrossRef] [PubMed]
-
Maduike, N.Z.; Tehranchi, A.K.; Wang, J.D.; Kreuzer, K.N. Replication of the Escherichia coli chromosome in RNase HI-deficient cells: Multiple initiation regions and fork dynamics. Mol. Microbiol. 2014, 91, 39-56. [CrossRef] [PubMed]
-
(2014)
Mol. Microbiol.
, vol.91
, pp. 39-56
-
-
Maduike, N.Z.1
Tehranchi, A.K.2
Wang, J.D.3
Kreuzer, K.N.4
-
52
-
-
33846200467
-
Noise-reduction filtering for accurate detection of replication termini in bacterial genomes
-
CrossRef] [PubMed]
-
Arakawa, K.; Saito, R.; Tomita, M. Noise-reduction filtering for accurate detection of replication termini in bacterial genomes. FEBS Lett. 2007, 581, 253-258. [CrossRef] [PubMed]
-
(2007)
FEBS Lett
, vol.581
, pp. 253-258
-
-
Arakawa, K.1
Saito, R.2
Tomita, M.3
-
53
-
-
0032524384
-
Analyzing genomes with cumulative skew diagrams
-
CrossRef] [PubMed]
-
Grigoriev, A. Analyzing genomes with cumulative skew diagrams. Nucleic Acids Res. 1998, 26, 2286-2290. [CrossRef] [PubMed]
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 2286-2290
-
-
Grigoriev, A.1
-
54
-
-
33947231236
-
Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites
-
CrossRef] [PubMed]
-
Hendrickson, H.; Lawrence, J.G. Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites. Mol. Microbiol. 2007, 64, 42-56. [CrossRef] [PubMed]
-
(2007)
Mol. Microbiol
, vol.64
, pp. 42-56
-
-
Hendrickson, H.1
Lawrence, J.G.2
-
55
-
-
0029985398
-
Asymmetric substitution patterns in the two DNA strands of bacteria
-
CrossRef] [PubMed]
-
Lobry, J.R. Asymmetric substitution patterns in the two DNA strands of bacteria. Mol. Biol. Evol. 1996, 13, 660-665. [CrossRef] [PubMed]
-
(1996)
Mol. Biol. Evol
, vol.13
, pp. 660-665
-
-
Lobry, J.R.1
-
56
-
-
0032543992
-
Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome
-
CrossRef] [PubMed]
-
Fijalkowska, I.J.; Jonczyk, P.; Tkaczyk, M.M.; Bialoskorska, M.; Schaaper, R.M. Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 1998, 95, 10020-10025. [CrossRef] [PubMed]
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10020-10025
-
-
Fijalkowska, I.J.1
Jonczyk, P.2
Tkaczyk, M.M.3
Bialoskorska, M.4
Schaaper, R.M.5
-
57
-
-
0037179524
-
Asymmetric directional mutation pressures in bacteria
-
CrossRef]
-
Lobry, J.R.; Sueoka, N. Asymmetric directional mutation pressures in bacteria. Genome Biol. 2002. [CrossRef]
-
(2002)
Genome Biol
-
-
Lobry, J.R.1
Sueoka, N.2
-
58
-
-
84859226913
-
Validation of bacterial replication termination models using simulation of genomic mutations
-
CrossRef] [PubMed]
-
Kono, N.; Arakawa, K.; Tomita, M. Validation of bacterial replication termination models using simulation of genomic mutations. PLoS ONE 2012, 7, e34526. [CrossRef] [PubMed]
-
(2012)
Plos ONE
, vol.7
-
-
Kono, N.1
Arakawa, K.2
Tomita, M.3
-
59
-
-
0024276903
-
When polymerases collide: Replication and the transcriptional organization of the E. coli chromosome
-
CrossRef]
-
Brewer, B.J. When polymerases collide: Replication and the transcriptional organization of the E. coli chromosome. Cell 1988, 53, 679-686. [CrossRef]
-
(1988)
Cell
, vol.53
, pp. 679-686
-
-
Brewer, B.J.1
-
60
-
-
0026733965
-
Consequences of replication fork movement through transcription units in vivo
-
CrossRef] [PubMed]
-
French, S. Consequences of replication fork movement through transcription units in vivo. Science 1992, 258, 1362-1365. [CrossRef] [PubMed]
-
(1992)
Science
, vol.258
, pp. 1362-1365
-
-
French, S.1
-
61
-
-
0344668838
-
Gene essentiality determines chromosome organisation in bacteria
-
CrossRef] [PubMed]
-
Rocha, E.P.C.; Danchin, A. Gene essentiality determines chromosome organisation in bacteria. Nucleic Acids Res. 2003, 31, 6570-6577. [CrossRef] [PubMed]
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6570-6577
-
-
Rocha, E.P.C.1
Danchin, A.2
-
62
-
-
0028227702
-
The RNA chain elongation rate in Escherichia coli depends on the growth rate
-
[PubMed]
-
Vogel, U.; Jensen, K.F. The RNA chain elongation rate in Escherichia coli depends on the growth rate. J. Bacteriol. 1994, 176, 2807-2813. [PubMed]
-
(1994)
J. Bacteriol
, vol.176
, pp. 2807-2813
-
-
Vogel, U.1
Jensen, K.F.2
-
63
-
-
66149088099
-
Varying rate of RNA chain elongation during rrn transcription in Escherichia coli
-
CrossRef] [PubMed]
-
Dennis, P.P.; Ehrenberg, M.; Fange, D.; Bremer, H. Varying rate of RNA chain elongation during rrn transcription in Escherichia coli. J. Bacteriol. 2009, 191, 3740-3746. [CrossRef] [PubMed]
-
(2009)
J. Bacteriol
, vol.191
, pp. 3740-3746
-
-
Dennis, P.P.1
Ehrenberg, M.2
Fange, D.3
Bremer, H.4
-
64
-
-
84880473591
-
Back to the origin: Reconsidering replication, transcription, epigenetics, and cell cycle control
-
CrossRef] [PubMed]
-
Evertts, A.G.; Coller, H.A. Back to the origin: Reconsidering replication, transcription, epigenetics, and cell cycle control. Genes Cancer 2012, 3, 678-696. [CrossRef] [PubMed]
-
(2012)
Genes Cancer
, vol.3
, pp. 678-696
-
-
Evertts, A.G.1
Coller, H.A.2
-
65
-
-
0032417093
-
Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes
-
CrossRef] [PubMed]
-
McLean, M.J.; Wolfe, K.H.; Devine, K.M. Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes. J. Mol. Evol. 1998, 47, 691-696. [CrossRef] [PubMed]
-
(1998)
J. Mol. Evol
, vol.47
, pp. 691-696
-
-
McLean, M.J.1
Wolfe, K.H.2
Devine, K.M.3
-
66
-
-
84921799659
-
Peaks cloaked in the mist: The landscape of mammalian replication origins
-
CrossRef] [PubMed]
-
Hyrien, O. Peaks cloaked in the mist: The landscape of mammalian replication origins. J. Cell Biol. 2015, 208, 147-160. [CrossRef] [PubMed]
-
(2015)
J. Cell Biol
, vol.208
, pp. 147-160
-
-
Hyrien, O.1
-
67
-
-
0033974047
-
Mechanisms and consequences of replication fork arrest
-
CrossRef]
-
Hyrien, O. Mechanisms and consequences of replication fork arrest. Biochimie 2000, 82, 5-17. [CrossRef]
-
(2000)
Biochimie
, vol.82
, pp. 5-17
-
-
Hyrien, O.1
-
68
-
-
33947432388
-
Replication fork stalling at natural impediments
-
CrossRef] [PubMed]
-
Mirkin, E.V.; Mirkin, S.M. Replication fork stalling at natural impediments. Microbiol. Mol. Biol. Rev. MMBR 2007, 71, 13-35. [CrossRef] [PubMed]
-
(2007)
Microbiol. Mol. Biol. Rev. MMBR
, vol.71
, pp. 13-35
-
-
Mirkin, E.V.1
Mirkin, S.M.2
-
69
-
-
84857191660
-
Transcription as a source of genome instability
-
CrossRef] [PubMed]
-
Kim, N.; Jinks-Robertson, S. Transcription as a source of genome instability. Nat. Rev. Genet. 2012, 13, 204-214. [CrossRef] [PubMed]
-
(2012)
Nat. Rev. Genet
, vol.13
, pp. 204-214
-
-
Kim, N.1
Jinks-Robertson, S.2
-
70
-
-
84862763199
-
The conflict between DNA replication and transcription
-
CrossRef] [PubMed]
-
McGlynn, P.; Savery, N.J.; Dillingham, M.S. The conflict between DNA replication and transcription. Mol. Microbiol. 2012, 85, 12-20. [CrossRef] [PubMed]
-
(2012)
Mol. Microbiol
, vol.85
, pp. 12-20
-
-
McGlynn, P.1
Savery, N.J.2
Dillingham, M.S.3
-
71
-
-
34249941504
-
Avoiding and resolving conflicts between DNA replication and transcription
-
CrossRef] [PubMed]
-
Rudolph, C.J.; Dhillon, P.; Moore, T.; Lloyd, R.G. Avoiding and resolving conflicts between DNA replication and transcription. DNA Repair 2007, 6, 981-993. [CrossRef] [PubMed]
-
(2007)
DNA Repair
, vol.6
, pp. 981-993
-
-
Rudolph, C.J.1
Dhillon, P.2
Moore, T.3
Lloyd, R.G.4
-
72
-
-
84862490443
-
Replication-transcription conflicts in bacteria
-
CrossRef] [PubMed]
-
Merrikh, H.; Zhang, Y.; Grossman, A.D.; Wang, J.D. Replication-transcription conflicts in bacteria. Nat. Rev. Microbiol. 2012, 10, 449-458. [CrossRef] [PubMed]
-
(2012)
Nat. Rev. Microbiol
, vol.10
, pp. 449-458
-
-
Merrikh, H.1
Zhang, Y.2
Grossman, A.D.3
Wang, J.D.4
-
73
-
-
84932091556
-
Replication Restart after replication-transcription conflicts requires RecA in Bacillus subtilis
-
CrossRef] [PubMed]
-
Million-Weaver, S.; Samadpour, A.N.; Merrikh, H. Replication Restart after replication-transcription conflicts requires RecA in Bacillus subtilis. J. Bacteriol. 2015, 197, 2374-2382. [CrossRef] [PubMed]
-
(2015)
J. Bacteriol
, vol.197
, pp. 2374-2382
-
-
Million-Weaver, S.1
Samadpour, A.N.2
Merrikh, H.3
-
74
-
-
0030737725
-
Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription
-
[PubMed]
-
Kogoma, T. Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription. Microbiol. Mol. Biol. Rev. MMBR 1997, 61, 212-238. [PubMed]
-
(1997)
Microbiol. Mol. Biol. Rev. MMBR
, vol.61
, pp. 212-238
-
-
Kogoma, T.1
-
75
-
-
0021610617
-
Multiple origin usage for DNA replication in sdrA(Rnh) mutants of Escherichia coli K-12. Initiation in the absence of oriC
-
CrossRef]
-
De Massy, B.; Fayet, O.; Kogoma, T. Multiple origin usage for DNA replication in sdrA(rnh) mutants of Escherichia coli K-12. Initiation in the absence of oriC. J. Mol. Biol. 1984, 178, 227-236. [CrossRef]
-
(1984)
J. Mol. Biol
, vol.178
, pp. 227-236
-
-
De Massy, B.1
Fayet, O.2
Kogoma, T.3
-
76
-
-
79952126098
-
Co-directional replication-transcription conflicts lead to replication restart
-
CrossRef] [PubMed]
-
Merrikh, H.; Machón, C.; Grainger, W.H.; Grossman, A.D.; Soultanas, P. Co-directional replication-transcription conflicts lead to replication restart. Nature 2011, 470, 554-557. [CrossRef] [PubMed]
-
(2011)
Nature
, vol.470
, pp. 554-557
-
-
Merrikh, H.1
Machón, C.2
Grainger, W.H.3
Grossman, A.D.4
Soultanas, P.5
-
77
-
-
0027957144
-
The DNA replication fork blocked at the Ter site may be an entrance for the RecBCD enzyme into duplex DNA
-
[PubMed]
-
Horiuchi, T.; Fujimura, Y.; Nishitani, H.; Kobayashi, T.; Hidaka, M. The DNA replication fork blocked at the Ter site may be an entrance for the RecBCD enzyme into duplex DNA. J. Bacteriol. 1994, 176, 4656-4663. [PubMed]
-
(1994)
J. Bacteriol
, vol.176
, pp. 4656-4663
-
-
Horiuchi, T.1
Fujimura, Y.2
Nishitani, H.3
Kobayashi, T.4
Hidaka, M.5
-
78
-
-
0033954246
-
Replication fork pausing and recombination or “gimme a break”
-
[PubMed]
-
Rothstein, R.; Michel, B.; Gangloff, S. Replication fork pausing and recombination or “gimme a break”. Genes Dev. 2000, 14, 1-10. [PubMed]
-
(2000)
Genes Dev
, vol.14
, pp. 1-10
-
-
Rothstein, R.1
Michel, B.2
Gangloff, S.3
-
79
-
-
0028027784
-
Tus prevents overreplication of oriC plasmid DNA
-
[PubMed]
-
Hiasa, H.; Marians, K.J. Tus prevents overreplication of oriC plasmid DNA. J. Biol. Chem. 1994, 269, 26959-26968. [PubMed]
-
(1994)
J. Biol. Chem
, vol.269
, pp. 26959-26968
-
-
Hiasa, H.1
Marians, K.J.2
-
80
-
-
0030911141
-
Inactivation of the replication-termination system affects the replication mode and causes unstable maintenance of plasmid R1
-
CrossRef] [PubMed]
-
Krabbe, M.; Zabielski, J.; Bernander, R.; Nordström, K. Inactivation of the replication-termination system affects the replication mode and causes unstable maintenance of plasmid R1. Mol. Microbiol. 1997, 24, 723-735. [CrossRef] [PubMed]
-
(1997)
Mol. Microbiol
, vol.24
, pp. 723-735
-
-
Krabbe, M.1
Zabielski, J.2
Bernander, R.3
Nordström, K.4
-
81
-
-
29144461520
-
Plasmid R1—Replication and its control
-
CrossRef] [PubMed]
-
Nordström, K. Plasmid R1—Replication and its control. Plasmid 2006, 55, 1-26. [CrossRef] [PubMed]
-
(2006)
Plasmid
, vol.55
, pp. 1-26
-
-
Nordström, K.1
-
82
-
-
15944409969
-
A new in vivo termination function for DNA polymerase I of Escherichia coli K12
-
CrossRef] [PubMed]
-
Markovitz, A. A new in vivo termination function for DNA polymerase I of Escherichia coli K12. Mol. Microbiol. 2005, 55, 1867-1882. [CrossRef] [PubMed]
-
(2005)
Mol. Microbiol
, vol.55
, pp. 1867-1882
-
-
Markovitz, A.1
-
83
-
-
0035793090
-
Effects of replication termination mutants on chromosome partitioning in Bacillus subtilis
-
CrossRef] [PubMed]
-
Lemon, K.P.; Kurtser, I.; Grossman, A.D. Effects of replication termination mutants on chromosome partitioning in Bacillus subtilis. Proc. Natl. Acad. Sci. USA 2001, 98, 212-217. [CrossRef] [PubMed]
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 212-217
-
-
Lemon, K.P.1
Kurtser, I.2
Grossman, A.D.3
-
84
-
-
0029026201
-
Escherichia coli RecG and RecA proteins in R-loop formation
-
[PubMed]
-
Hong, X.; Cadwell, G.W.; Kogoma, T. Escherichia coli RecG and RecA proteins in R-loop formation. EMBO J. 1995, 14, 2385-2392. [PubMed]
-
(1995)
EMBO J
, vol.14
, pp. 2385-2392
-
-
Hong, X.1
Cadwell, G.W.2
Kogoma, T.3
-
85
-
-
84946732498
-
The RECG1 DNA translocase is a key factor in recombination surveillance, repair, and segregation of the mitochondrial DNA in Arabidopsis
-
CrossRef] [PubMed]
-
Wallet, C.; le Ret, M.; Bergdoll, M.; Bichara, M.; Dietrich, A.; Gualberto, J.M. The RECG1 DNA translocase is a key factor in recombination surveillance, repair, and segregation of the mitochondrial DNA in Arabidopsis. Plant Cell 2015, 27, 2907-2925. [CrossRef] [PubMed]
-
(2015)
Plant Cell
, vol.27
, pp. 2907-2925
-
-
Wallet, C.1
Le Ret, M.2
Bergdoll, M.3
Bichara, M.4
Dietrich, A.5
Gualberto, J.M.6
-
86
-
-
84919497573
-
Completion of DNA replication in Escherichia coli
-
CrossRef] [PubMed]
-
Wendel, B.M.; Courcelle, C.T.; Courcelle, J. Completion of DNA replication in Escherichia coli. Proc. Natl. Acad. Sci. USA 2014, 111, 16454-16459. [CrossRef] [PubMed]
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 16454-16459
-
-
Wendel, B.M.1
Courcelle, C.T.2
Courcelle, J.3
-
87
-
-
0036184234
-
Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities
-
CrossRef]
-
Gregg, A.V.; McGlynn, P.; Jaktaji, R.P.; Lloyd, R.G. Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities. Mol. Cell 2002, 9, 241-251. [CrossRef]
-
(2002)
Mol. Cell
, vol.9
, pp. 241-251
-
-
Gregg, A.V.1
McGlynn, P.2
Jaktaji, R.P.3
Lloyd, R.G.4
-
88
-
-
0022977660
-
The Escherichia coli dnaB replication protein is a DNA helicase
-
[PubMed]
-
LeBowitz, J.H.; McMacken, R. The Escherichia coli dnaB replication protein is a DNA helicase. J. Biol. Chem. 1986, 261, 4738-4748. [PubMed]
-
(1986)
J. Biol. Chem
, vol.261
, pp. 4738-4748
-
-
Lebowitz, J.H.1
McMacken, R.2
-
89
-
-
0036753338
-
DnaB drives DNA branch migration and dislodges proteins while encircling two DNA strands
-
CrossRef]
-
Kaplan, D.L.; O’Donnell, M. DnaB drives DNA branch migration and dislodges proteins while encircling two DNA strands. Mol. Cell 2002, 10, 647-657. [CrossRef]
-
(2002)
Mol. Cell
, vol.10
, pp. 647-657
-
-
Kaplan, D.L.1
O’Donnell, M.2
-
90
-
-
84938952129
-
I came to a fork in the DNA and there was RecG
-
CrossRef] [PubMed]
-
Bianco, P.R. I came to a fork in the DNA and there was RecG. Prog. Biophys. Mol. Biol. 2015, 117, 166-173. [CrossRef] [PubMed]
-
(2015)
Prog. Biophys. Mol. Biol
, vol.117
, pp. 166-173
-
-
Bianco, P.R.1
-
91
-
-
0035902573
-
Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled
-
CrossRef] [PubMed]
-
McGlynn, P.; Lloyd, R.G.; Marians, K.J. Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled. Proc. Natl. Acad. Sci. USA 2001, 98, 8235-8240. [CrossRef] [PubMed]
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8235-8240
-
-
McGlynn, P.1
Lloyd, R.G.2
Marians, K.J.3
-
92
-
-
33645636759
-
Stabilization of a stalled replication fork by concerted actions of two helicases
-
CrossRef] [PubMed]
-
Tanaka, T.; Masai, H. Stabilization of a stalled replication fork by concerted actions of two helicases. J. Biol. Chem. 2006, 281, 3484-3493. [CrossRef] [PubMed]
-
(2006)
J. Biol. Chem
, vol.281
, pp. 3484-3493
-
-
Tanaka, T.1
Masai, H.2
-
93
-
-
84961999119
-
25 Years on and no end in sight: A perspective on the role of RecG protein
-
CrossRef] [PubMed]
-
Lloyd, R.G.; Rudolph, C.J. 25 Years on and no end in sight: A perspective on the role of RecG protein. Curr. Genet. 2016. [CrossRef] [PubMed]
-
(2016)
Curr. Genet
-
-
Lloyd, R.G.1
Rudolph, C.J.2
-
94
-
-
0034176335
-
Initiation of genetic recombination and recombination-dependent replication
-
CrossRef]
-
Kowalczykowski, S.C. Initiation of genetic recombination and recombination-dependent replication. Trends Biochem. Sci. 2000, 25, 156-165. [CrossRef]
-
(2000)
Trends Biochem. Sci
, vol.25
, pp. 156-165
-
-
Kowalczykowski, S.C.1
-
95
-
-
0031028107
-
ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase
-
CrossRef] [PubMed]
-
Fukuoh, A.; Iwasaki, H.; Ishioka, K.; Shinagawa, H. ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase. EMBO J. 1997, 16, 203-209. [CrossRef] [PubMed]
-
(1997)
EMBO J
, vol.16
, pp. 203-209
-
-
Fukuoh, A.1
Iwasaki, H.2
Ishioka, K.3
Shinagawa, H.4
-
96
-
-
0021276605
-
RNase H-defective mutants of Escherichia coli: A possible discriminatory role of RNase H in initiation of DNA replication
-
CrossRef] [PubMed]
-
Horiuchi, T.; Maki, H.; Sekiguchi, M. RNase H-defective mutants of Escherichia coli: A possible discriminatory role of RNase H in initiation of DNA replication. Mol. Gen. Genet. MGG 1984, 195, 17-22. [CrossRef] [PubMed]
-
(1984)
Mol. Gen. Genet. MGG
, vol.195
, pp. 17-22
-
-
Horiuchi, T.1
Maki, H.2
Sekiguchi, M.3
-
97
-
-
61349178533
-
Molecular diversities, substrate binding domains, and catalytic mechanism of the prokaryotic enzymes
-
CrossRef] [PubMed]
-
Tadokoro, T.; Kanaya, S. Ribonuclease H: Molecular diversities, substrate binding domains, and catalytic mechanism of the prokaryotic enzymes. FEBS J. 2009, 276, 1482-1493. [CrossRef] [PubMed]
-
(2009)
FEBS J
, vol.276
, pp. 1482-1493
-
-
Tadokoro, T.1
Kanaya, S.2
Ribonuclease, H.3
-
98
-
-
0030582737
-
The RecG branch migration protein of Escherichia coli dissociates R-loops
-
CrossRef] [PubMed]
-
Vincent, S.D.; Mahdi, A.A.; Lloyd, R.G. The RecG branch migration protein of Escherichia coli dissociates R-loops. J. Mol. Biol. 1996, 264, 713-721. [CrossRef] [PubMed]
-
(1996)
J. Mol. Biol
, vol.264
, pp. 713-721
-
-
Vincent, S.D.1
Mahdi, A.A.2
Lloyd, R.G.3
-
99
-
-
84924388040
-
End of the beginning: Elongation and termination features of alternative modes of chromosomal replication initiation in bacteria
-
CrossRef] [PubMed]
-
Gowrishankar, J. End of the beginning: elongation and termination features of alternative modes of chromosomal replication initiation in bacteria. PLoS Genet. 2015, 11, e1004909. [CrossRef] [PubMed]
-
(2015)
Plos Genet
, vol.11
-
-
Gowrishankar, J.1
-
100
-
-
84868137684
-
Modulation of DNA damage tolerance in Escherichia coli recG and ruv strains by mutations affecting PriB, the ribosome and RNA polymerase
-
CrossRef] [PubMed]
-
Mahdi, A.A.; Briggs, G.S.; Lloyd, R.G. Modulation of DNA damage tolerance in Escherichia coli recG and ruv strains by mutations affecting PriB, the ribosome and RNA polymerase. Mol. Microbiol. 2012, 86, 675-691. [CrossRef] [PubMed]
-
(2012)
Mol. Microbiol
, vol.86
, pp. 675-691
-
-
Mahdi, A.A.1
Briggs, G.S.2
Lloyd, R.G.3
-
101
-
-
78650882581
-
Replication termination and chromosome dimer resolution in the archaeon Sulfolobus solfataricus
-
CrossRef] [PubMed]
-
Duggin, I.G.; Dubarry, N.; Bell, S.D. Replication termination and chromosome dimer resolution in the archaeon Sulfolobus solfataricus. EMBO J. 2011, 30, 145-153. [CrossRef] [PubMed]
-
(2011)
EMBO J
, vol.30
, pp. 145-153
-
-
Duggin, I.G.1
Dubarry, N.2
Bell, S.D.3
-
102
-
-
84942061078
-
The mechanism of DNA replication termination in vertebrates
-
CrossRef] [PubMed]
-
Dewar, J.M.; Budzowska, M.; Walter, J.C. The mechanism of DNA replication termination in vertebrates. Nature 2015, 525, 345-350. [CrossRef] [PubMed]
-
(2015)
Nature
, vol.525
, pp. 345-350
-
-
Dewar, J.M.1
Budzowska, M.2
Walter, J.C.3
-
103
-
-
84908248970
-
Cdc48 and a ubiquitin ligase drive disassembly of the CMG helicase at the end of DNA replication
-
CrossRef] [PubMed]
-
Maric, M.; Maculins, T.; de Piccoli, G.; Labib, K. Cdc48 and a ubiquitin ligase drive disassembly of the CMG helicase at the end of DNA replication. Science 2014. [CrossRef] [PubMed]
-
(2014)
Science
-
-
Maric, M.1
Maculins, T.2
De Piccoli, G.3
Labib, K.4
-
104
-
-
84908257634
-
Polyubiquitylation drives replisome disassembly at the termination of DNA replication
-
CrossRef] [PubMed]
-
Moreno, S.P.; Bailey, R.; Campion, N.; Herron, S.; Gambus, A. Polyubiquitylation drives replisome disassembly at the termination of DNA replication. Science 2014, 346, 477-481. [CrossRef] [PubMed]
-
(2014)
Science
, vol.346
, pp. 477-481
-
-
Moreno, S.P.1
Bailey, R.2
Campion, N.3
Herron, S.4
Gambus, A.5
-
105
-
-
77955997707
-
Replication termination at eukaryotic chromosomes is mediated by Top2 and occurs at genomic loci containing pausing elements
-
CrossRef] [PubMed]
-
Fachinetti, D.; Bermejo, R.; Cocito, A.; Minardi, S.; Katou, Y.; Kanoh, Y.; Shirahige, K.; Azvolinsky, A.; Zakian, V.A.; Foiani, M. Replication termination at eukaryotic chromosomes is mediated by Top2 and occurs at genomic loci containing pausing elements. Mol. Cell 2010, 39, 595-605. [CrossRef] [PubMed]
-
(2010)
Mol. Cell
, vol.39
, pp. 595-605
-
-
Fachinetti, D.1
Bermejo, R.2
Cocito, A.3
Minardi, S.4
Katou, Y.5
Kanoh, Y.6
Shirahige, K.7
Azvolinsky, A.8
Zakian, V.A.9
Foiani, M.10
-
106
-
-
84858330322
-
The DNA helicase Pfh1 promotes fork merging at replication termination sites to ensure genome stability
-
CrossRef] [PubMed]
-
Steinacher, R.; Osman, F.; Dalgaard, J.Z.; Lorenz, A.; Whitby, M.C. The DNA helicase Pfh1 promotes fork merging at replication termination sites to ensure genome stability. Genes Dev. 2012, 26, 594-602. [CrossRef] [PubMed]
-
(2012)
Genes Dev
, vol.26
, pp. 594-602
-
-
Steinacher, R.1
Osman, F.2
Dalgaard, J.Z.3
Lorenz, A.4
Whitby, M.C.5
-
107
-
-
84934768282
-
Regulation of unperturbed DNA replication by ubiquitylation
-
CrossRef] [PubMed]
-
Moreno, S.P.; Gambus, A. Regulation of unperturbed DNA replication by ubiquitylation. Genes 2015, 6, 451-468. [CrossRef] [PubMed]
-
(2015)
Genes
, vol.6
, pp. 451-468
-
-
Moreno, S.P.1
Gambus, A.2
-
108
-
-
76749123854
-
The FANCM family of DNA helicases/translocases
-
CrossRef] [PubMed]
-
Whitby, M.C. The FANCM family of DNA helicases/translocases. DNA Repair 2010, 9, 224-236. [CrossRef] [PubMed]
-
(2010)
DNA Repair
, vol.9
, pp. 224-236
-
-
Whitby, M.C.1
-
109
-
-
33747352774
-
The Bloom’s syndrome helicase can promote the regression of a model replication fork
-
CrossRef] [PubMed]
-
Ralf, C.; Hickson, I.D.; Wu, L. The Bloom’s syndrome helicase can promote the regression of a model replication fork. J. Biol. Chem. 2006, 281, 22839-22846. [CrossRef] [PubMed]
-
(2006)
J. Biol. Chem
, vol.281
, pp. 22839-22846
-
-
Ralf, C.1
Hickson, I.D.2
Wu, L.3
-
110
-
-
84856246154
-
SMARCAL1 catalyzes fork regression and Holliday junction migration to maintain genome stability during DNA replication
-
CrossRef] [PubMed]
-
Bétous, R.; Mason, A.C.; Rambo, R.P.; Bansbach, C.E.; Badu-Nkansah, A.; Sirbu, B.M.; Eichman, B.F.; Cortez, D. SMARCAL1 catalyzes fork regression and Holliday junction migration to maintain genome stability during DNA replication. Genes Dev. 2012, 26, 151-162. [CrossRef] [PubMed]
-
(2012)
Genes Dev
, vol.26
, pp. 151-162
-
-
Bétous, R.1
Mason, A.C.2
Rambo, R.P.3
Bansbach, C.E.4
Badu-Nkansah, A.5
Sirbu, B.M.6
Eichman, B.F.7
Cortez, D.8
-
111
-
-
84867900582
-
Escherichia coli RecG functionally suppresses human Bloom syndrome phenotypes
-
CrossRef] [PubMed]
-
Killen, M.W.; Stults, D.M.; Wilson, W.A.; Pierce, A.J. Escherichia coli RecG functionally suppresses human Bloom syndrome phenotypes. BMC Mol. Biol. 2012. [CrossRef] [PubMed]
-
(2012)
BMC Mol. Biol
-
-
Killen, M.W.1
Stults, D.M.2
Wilson, W.A.3
Pierce, A.J.4
-
112
-
-
81055138204
-
Quality control in the initiation of eukaryotic DNA replication
-
CrossRef] [PubMed]
-
Diffley, J.F.X. Quality control in the initiation of eukaryotic DNA replication. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2011, 366, 3545-3553. [CrossRef] [PubMed]
-
(2011)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.366
, pp. 3545-3553
-
-
Diffley, J.F.X.1
-
113
-
-
78649499624
-
The mtDNA mutation spectrum of the progeroid Polg mutator mouse includes abundant control region multimers
-
CrossRef] [PubMed]
-
Williams, S.L.; Huang, J.; Edwards, Y.J.K.; Ulloa, R.H.; Dillon, L.M.; Prolla, T.A.; Vance, J.M.; Moraes, C.T.; Züchner, S. The mtDNA mutation spectrum of the progeroid Polg mutator mouse includes abundant control region multimers. Cell Metab. 2010, 12, 675-682. [CrossRef] [PubMed]
-
(2010)
Cell Metab
, vol.12
, pp. 675-682
-
-
Williams, S.L.1
Huang, J.2
Edwards, Y.J.K.3
Ulloa, R.H.4
Dillon, L.M.5
Prolla, T.A.6
Vance, J.M.7
Moraes, C.T.8
Züchner, S.9
-
114
-
-
84873087072
-
Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease
-
CrossRef] [PubMed]
-
Kornblum, C.; Nicholls, T.J.; Haack, T.B.; Schöler, S.; Peeva, V.; Danhauser, K.; Hallmann, K.; Zsurka, G.; Rorbach, J.; Iuso, A., et al. Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease. Nat. Genet. 2013, 45, 214-219. [CrossRef] [PubMed]
-
(2013)
Nat. Genet
, vol.45
, pp. 214-219
-
-
Kornblum, C.1
Nicholls, T.J.2
Haack, T.B.3
Schöler, S.4
Peeva, V.5
Danhauser, K.6
Hallmann, K.7
Zsurka, G.8
Rorbach, J.9
Iuso, A.10
|