메뉴 건너뛰기




Volumn 86, Issue 3, 2012, Pages 675-691

Modulation of DNA damage tolerance in Escherichia coli recG and ruv strains by mutations affecting PriB, the ribosome and RNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; ESCHERICHIA COLI PROTEIN; NUSA PROTEIN; PRIB PROTEIN; RECG HELICASE; RNA POLYMERASE; UNCLASSIFIED DRUG;

EID: 84868137684     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/mmi.12010     Document Type: Article
Times cited : (11)

References (83)
  • 1
    • 0029850005 scopus 로고    scopus 로고
    • Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12
    • Al-Deib, A.A., Mahdi, A.A., and Lloyd, R.G. (1996) Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12. J Bacteriol 178: 6782-6789.
    • (1996) J Bacteriol , vol.178 , pp. 6782-6789
    • Al-Deib, A.A.1    Mahdi, A.A.2    Lloyd, R.G.3
  • 2
    • 0023777735 scopus 로고
    • Tightly regulated tac promoter vectors useful for the expression of unfused and fused proteins in Escherichia coli
    • Amann, E., Ochs, B., and Abel, K.J. (1988) Tightly regulated tac promoter vectors useful for the expression of unfused and fused proteins in Escherichia coli. Gene 69: 301-315.
    • (1988) Gene , vol.69 , pp. 301-315
    • Amann, E.1    Ochs, B.2    Abel, K.J.3
  • 3
    • 0028209084 scopus 로고
    • D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli
    • Asai, T., and Kogoma, T. (1994a) D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli. J Bacteriol 176: 1807-1812.
    • (1994) J Bacteriol , vol.176 , pp. 1807-1812
    • Asai, T.1    Kogoma, T.2
  • 4
    • 0028023335 scopus 로고
    • Roles of ruvA, ruvC and recG gene functions in normal and DNA damage-inducible replication of the Escherichia coli chromosome
    • Asai, T., and Kogoma, T. (1994b) Roles of ruvA, ruvC and recG gene functions in normal and DNA damage-inducible replication of the Escherichia coli chromosome. Genetics 137: 895-902.
    • (1994) Genetics , vol.137 , pp. 895-902
    • Asai, T.1    Kogoma, T.2
  • 5
    • 79951572633 scopus 로고    scopus 로고
    • Localization of an accessory helicase at the replisome is critical in sustaining efficient genome duplication
    • Atkinson, J., Gupta, M.K., Rudolph, C.J., Bell, H., Lloyd, R.G., and McGlynn, P. (2011) Localization of an accessory helicase at the replisome is critical in sustaining efficient genome duplication. Nucleic Acids Res 39: 949-957.
    • (2011) Nucleic Acids Res , vol.39 , pp. 949-957
    • Atkinson, J.1    Gupta, M.K.2    Rudolph, C.J.3    Bell, H.4    Lloyd, R.G.5    McGlynn, P.6
  • 6
    • 77954371207 scopus 로고    scopus 로고
    • RNA polymerase mutations that facilitate replication progression in the rep uvrD recF mutant lacking two accessory replicative helicases
    • Baharoglu, Z., Lestini, R., Duigou, S., and Michel, B. (2010) RNA polymerase mutations that facilitate replication progression in the rep uvrD recF mutant lacking two accessory replicative helicases. Mol Microbiol 77: 324-336.
    • (2010) Mol Microbiol , vol.77 , pp. 324-336
    • Baharoglu, Z.1    Lestini, R.2    Duigou, S.3    Michel, B.4
  • 8
    • 0032486142 scopus 로고    scopus 로고
    • RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters
    • Bartlett, M.S., Gaal, T., Ross, W., and Gourse, R.L. (1998) RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters. J Mol Biol 279: 331-345.
    • (1998) J Mol Biol , vol.279 , pp. 331-345
    • Bartlett, M.S.1    Gaal, T.2    Ross, W.3    Gourse, R.L.4
  • 9
    • 2942538589 scopus 로고    scopus 로고
    • Screening for synthetic lethal mutants in Escherichia coli and identification of EnvC (YibP) as a periplasmic septal ring factor with murein hydrolase activity
    • Bernhardt, T.G., and de Boer, P.A. (2004) Screening for synthetic lethal mutants in Escherichia coli and identification of EnvC (YibP) as a periplasmic septal ring factor with murein hydrolase activity. Mol Microbiol 52: 1255-1269.
    • (2004) Mol Microbiol , vol.52 , pp. 1255-1269
    • Bernhardt, T.G.1    de Boer, P.A.2
  • 10
    • 75649142564 scopus 로고    scopus 로고
    • The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo
    • Boubakri, H., de Septenville, A.L., Viguera, E., and Michel, B. (2010) The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo. EMBO J 29: 145-157.
    • (2010) EMBO J , vol.29 , pp. 145-157
    • Boubakri, H.1    de Septenville, A.L.2    Viguera, E.3    Michel, B.4
  • 11
    • 34147099429 scopus 로고    scopus 로고
    • Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli
    • Bubunenko, M., Baker, T., and Court, D.L. (2007) Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli. J Bacteriol 189: 2844-2853.
    • (2007) J Bacteriol , vol.189 , pp. 2844-2853
    • Bubunenko, M.1    Baker, T.2    Court, D.L.3
  • 12
    • 28844489365 scopus 로고    scopus 로고
    • PriB stimulates PriA helicase via an interaction with single-stranded DNA
    • Cadman, C.J., Lopper, M., Moon, P.B., Keck, J.L., and McGlynn, P. (2005) PriB stimulates PriA helicase via an interaction with single-stranded DNA. J Biol Chem 280: 39693-39700.
    • (2005) J Biol Chem , vol.280 , pp. 39693-39700
    • Cadman, C.J.1    Lopper, M.2    Moon, P.B.3    Keck, J.L.4    McGlynn, P.5
  • 14
    • 0000880652 scopus 로고
    • Isolation and characterization of recombination deficient mutants of Escherichia coli K12
    • Clark, A.J., and Margulies, A.D. (1965) Isolation and characterization of recombination deficient mutants of Escherichia coli K12. Proc Natl Acad Sci USA 53: 451-459.
    • (1965) Proc Natl Acad Sci USA , vol.53 , pp. 451-459
    • Clark, A.J.1    Margulies, A.D.2
  • 15
    • 33847795537 scopus 로고    scopus 로고
    • Regulation of bacterial RecA protein function
    • Cox, M.M. (2007) Regulation of bacterial RecA protein function. Crit Rev Biochem Mol Biol 42: 41-63.
    • (2007) Crit Rev Biochem Mol Biol , vol.42 , pp. 41-63
    • Cox, M.M.1
  • 16
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko, K.A., and Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 6640-6645.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 17
    • 80052008241 scopus 로고    scopus 로고
    • Linking RNA polymerase backtracking to genome instability in E. coli
    • Dutta, D., Shatalin, K., Epshtein, V., Gottesman, M.E., and Nudler, E. (2011) Linking RNA polymerase backtracking to genome instability in E. coli. Cell 146: 533-543.
    • (2011) Cell , vol.146 , pp. 533-543
    • Dutta, D.1    Shatalin, K.2    Epshtein, V.3    Gottesman, M.E.4    Nudler, E.5
  • 18
    • 74549191169 scopus 로고    scopus 로고
    • An allosteric mechanism of Rho-dependent transcription termination
    • Epshtein, V., Dutta, D., Wade, J., and Nudler, E. (2010) An allosteric mechanism of Rho-dependent transcription termination. Nature 463: 245-249.
    • (2010) Nature , vol.463 , pp. 245-249
    • Epshtein, V.1    Dutta, D.2    Wade, J.3    Nudler, E.4
  • 19
    • 0031028107 scopus 로고    scopus 로고
    • ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase
    • Fukuoh, A., Iwasaki, H., Ishioka, K., and Shinagawa, H. (1997) ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase. EMBO J 16: 203-209.
    • (1997) EMBO J , vol.16 , pp. 203-209
    • Fukuoh, A.1    Iwasaki, H.2    Ishioka, K.3    Shinagawa, H.4
  • 20
    • 76749101865 scopus 로고    scopus 로고
    • Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival
    • Gabbai, C.B., and Marians, K.J. (2010) Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival. DNA Repair (Amst) 9: 202-209.
    • (2010) DNA Repair (Amst) , vol.9 , pp. 202-209
    • Gabbai, C.B.1    Marians, K.J.2
  • 21
    • 0036184234 scopus 로고    scopus 로고
    • Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities
    • Gregg, A.V., McGlynn, P., Jaktaji, R.P., and Lloyd, R.G. (2002) Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities. Mol Cell 9: 241-251.
    • (2002) Mol Cell , vol.9 , pp. 241-251
    • Gregg, A.V.1    McGlynn, P.2    Jaktaji, R.P.3    Lloyd, R.G.4
  • 22
    • 0018640152 scopus 로고
    • Rho and ribosome mutation interaction: lethality of rho-15 in rpsL or rpsE strains, and rho-15 methionine auxotrophy in rps+ strains of Escherichia coli
    • Guterman, S.K., and Howitt, C.L. (1979) Rho and ribosome mutation interaction: lethality of rho-15 in rpsL or rpsE strains, and rho-15 methionine auxotrophy in rps+ strains of Escherichia coli. Genetics 93: 353-360.
    • (1979) Genetics , vol.93 , pp. 353-360
    • Guterman, S.K.1    Howitt, C.L.2
  • 23
    • 70449633073 scopus 로고    scopus 로고
    • Rep provides a second motor at the replisome to promote duplication of protein-bound DNA
    • Guy, C.P., Atkinson, J., Gupta, M.K., Mahdi, A.A., Gwynn, E.J., Rudolph, C.J., etal. (2009) Rep provides a second motor at the replisome to promote duplication of protein-bound DNA. Mol Cell 36: 654-666.
    • (2009) Mol Cell , vol.36 , pp. 654-666
    • Guy, C.P.1    Atkinson, J.2    Gupta, M.K.3    Mahdi, A.A.4    Gwynn, E.J.5    Rudolph, C.J.6
  • 24
    • 0043237757 scopus 로고    scopus 로고
    • Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli
    • Harinarayanan, R., and Gowrishankar, J. (2003) Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli. J Mol Biol 332: 31-46.
    • (2003) J Mol Biol , vol.332 , pp. 31-46
    • Harinarayanan, R.1    Gowrishankar, J.2
  • 25
    • 14644415982 scopus 로고    scopus 로고
    • The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart
    • Heller, R.C., and Marians, K.J. (2005) The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart. Mol Cell 17: 733-743.
    • (2005) Mol Cell , vol.17 , pp. 733-743
    • Heller, R.C.1    Marians, K.J.2
  • 26
    • 0029026201 scopus 로고
    • Escherichia coli RecG and RecA proteins in R-loop formation
    • Hong, X., Cadell, G.W., and Kogoma, T. (1995) Escherichia coli RecG and RecA proteins in R-loop formation. EMBO J 14: 2385-2392.
    • (1995) EMBO J , vol.14 , pp. 2385-2392
    • Hong, X.1    Cadell, G.W.2    Kogoma, T.3
  • 27
    • 0021276605 scopus 로고
    • RNase H-defective mutants of Escherichia coli: a possible discriminatory role of RNase H in initiation of DNA replication
    • Horiuchi, T., Maki, H., and Sekiguchi, M. (1984) RNase H-defective mutants of Escherichia coli: a possible discriminatory role of RNase H in initiation of DNA replication. Mol Gen Genet 195: 17-22.
    • (1984) Mol Gen Genet , vol.195 , pp. 17-22
    • Horiuchi, T.1    Maki, H.2    Sekiguchi, M.3
  • 28
    • 0037329487 scopus 로고    scopus 로고
    • PriA supports two distinct pathways for replication restart in UV-irradiated Escherichia coli cells
    • Jaktaji, R.P., and Lloyd, R.G. (2003) PriA supports two distinct pathways for replication restart in UV-irradiated Escherichia coli cells. Mol Microbiol 47: 1091-1100.
    • (2003) Mol Microbiol , vol.47 , pp. 1091-1100
    • Jaktaji, R.P.1    Lloyd, R.G.2
  • 29
    • 0024674214 scopus 로고
    • Characterization of the gene rimK responsible for the addition of glutamic acid residues to the C-terminus of ribosomal protein S6 in Escherichia coli K12
    • Kang, W.K., Icho, T., Isono, S., Kitakawa, M., and Isono, K. (1989) Characterization of the gene rimK responsible for the addition of glutamic acid residues to the C-terminus of ribosomal protein S6 in Escherichia coli K12. Mol Gen Genet 217: 281-288.
    • (1989) Mol Gen Genet , vol.217 , pp. 281-288
    • Kang, W.K.1    Icho, T.2    Isono, S.3    Kitakawa, M.4    Isono, K.5
  • 30
    • 0030070356 scopus 로고    scopus 로고
    • Coupling of a replicative polymerase and helicase: a tau-DnaB interaction mediates rapid replication fork movement
    • Kim, S., Dallmann, H.G., McHenry, C.S., and Marians, K.J. (1996a) Coupling of a replicative polymerase and helicase: a tau-DnaB interaction mediates rapid replication fork movement. Cell 84: 643-650.
    • (1996) Cell , vol.84 , pp. 643-650
    • Kim, S.1    Dallmann, H.G.2    McHenry, C.S.3    Marians, K.J.4
  • 31
    • 0029839057 scopus 로고    scopus 로고
    • tau couples the leading- and lagging-strand polymerases at the Escherichia coli DNA replication fork
    • Kim, S., Dallmann, H.G., McHenry, C.S., and Marians, K.J. (1996b) tau couples the leading- and lagging-strand polymerases at the Escherichia coli DNA replication fork. J Biol Chem 271: 21406-21412.
    • (1996) J Biol Chem , vol.271 , pp. 21406-21412
    • Kim, S.1    Dallmann, H.G.2    McHenry, C.S.3    Marians, K.J.4
  • 32
    • 0029863634 scopus 로고    scopus 로고
    • The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair
    • Kogoma, T., Cadwell, G.W., Barnard, K.G., and Asai, T. (1996) The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair. J Bacteriol 178: 1258-1264.
    • (1996) J Bacteriol , vol.178 , pp. 1258-1264
    • Kogoma, T.1    Cadwell, G.W.2    Barnard, K.G.3    Asai, T.4
  • 33
    • 0022977660 scopus 로고
    • The Escherichia coli dnaB replication protein is a DNA helicase
    • LeBowitz, J.H., and McMacken, R. (1986) The Escherichia coli dnaB replication protein is a DNA helicase. J Biol Chem 261: 4738-4748.
    • (1986) J Biol Chem , vol.261 , pp. 4738-4748
    • LeBowitz, J.H.1    McMacken, R.2
  • 34
    • 0026356063 scopus 로고
    • Replication deficiencies in priA mutants of Escherichia coli lacking the primosomal replication n' protein
    • Lee, E.H., and Kornberg, A. (1991) Replication deficiencies in priA mutants of Escherichia coli lacking the primosomal replication n' protein. Proc Natl Acad Sci USA 88: 3029-3032.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 3029-3032
    • Lee, E.H.1    Kornberg, A.2
  • 35
    • 0033616683 scopus 로고    scopus 로고
    • Replication fork assembly at recombination intermediates is required for bacterial growth
    • Liu, J., Xu, L., Sandler, S.J., and Marians, K.J. (1999) Replication fork assembly at recombination intermediates is required for bacterial growth. Proc Natl Acad Sci USA 96: 3552-3555.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 3552-3555
    • Liu, J.1    Xu, L.2    Sandler, S.J.3    Marians, K.J.4
  • 36
    • 0026009412 scopus 로고
    • Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
    • Lloyd, R.G. (1991) Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG. J Bacteriol 173: 5414-5418.
    • (1991) J Bacteriol , vol.173 , pp. 5414-5418
    • Lloyd, R.G.1
  • 38
    • 0021223652 scopus 로고
    • Effect of ruv mutations on recombination and DNA repair in Escherichia coli K12
    • Lloyd, R.G., Benson, F.E., and Shurvinton, C.E. (1984) Effect of ruv mutations on recombination and DNA repair in Escherichia coli K12. Mol Gen Genet 194: 303-309.
    • (1984) Mol Gen Genet , vol.194 , pp. 303-309
    • Lloyd, R.G.1    Benson, F.E.2    Shurvinton, C.E.3
  • 39
    • 0023219669 scopus 로고
    • + DNA in conjugational crosses with a recB mutant of Escherichia coli K12 depends on recF, recJ, and recO
    • + DNA in conjugational crosses with a recB mutant of Escherichia coli K12 depends on recF, recJ, and recO. Mol Gen Genet 209: 135-141.
    • (1987) Mol Gen Genet , vol.209 , pp. 135-141
    • Lloyd, R.G.1    Evans, N.P.2    Buckman, C.3
  • 40
    • 0023915211 scopus 로고
    • Effect of recF, recJ, recN, recO and ruv mutations on ultraviolet survival and genetic recombination in a recD strain of Escherichia coli K-12
    • Lloyd, R.G., Porton, M.C., and Buckman, C. (1988) Effect of recF, recJ, recN, recO and ruv mutations on ultraviolet survival and genetic recombination in a recD strain of Escherichia coli K-12. Mol Gen Genet 212: 317-324.
    • (1988) Mol Gen Genet , vol.212 , pp. 317-324
    • Lloyd, R.G.1    Porton, M.C.2    Buckman, C.3
  • 41
    • 34250380631 scopus 로고    scopus 로고
    • A hand-off mechanism for primosome assembly in replication restart
    • Lopper, M., Boonsombat, R., Sandler, S.J., and Keck, J.L. (2007) A hand-off mechanism for primosome assembly in replication restart. Mol Cell 26: 781-793.
    • (2007) Mol Cell , vol.26 , pp. 781-793
    • Lopper, M.1    Boonsombat, R.2    Sandler, S.J.3    Keck, J.L.4
  • 42
    • 3142773416 scopus 로고    scopus 로고
    • A dnaT mutant with phenotypes similar to those of a priA2:kan mutant in Escherichia coli K-12
    • McCool, J.D., Ford, C.C., and Sandler, S.J. (2004) A dnaT mutant with phenotypes similar to those of a priA2:kan mutant in Escherichia coli K-12. Genetics 167: 569-578.
    • (2004) Genetics , vol.167 , pp. 569-578
    • McCool, J.D.1    Ford, C.C.2    Sandler, S.J.3
  • 43
    • 0034737294 scopus 로고    scopus 로고
    • Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
    • McGlynn, P., and Lloyd, R.G. (2000) Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell 101: 35-45.
    • (2000) Cell , vol.101 , pp. 35-45
    • McGlynn, P.1    Lloyd, R.G.2
  • 44
    • 0035902591 scopus 로고    scopus 로고
    • Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation
    • McGlynn, P., and Lloyd, R.G. (2001) Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation. Proc Natl Acad Sci USA 98: 8227-8234.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 8227-8234
    • McGlynn, P.1    Lloyd, R.G.2
  • 45
    • 0030852247 scopus 로고    scopus 로고
    • The DNA replication protein PriA and the recombination protein RecG bind D-loops
    • McGlynn, P., Al-Deib, A.A., Liu, J., Marians, K.J., and Lloyd, R.G. (1997) The DNA replication protein PriA and the recombination protein RecG bind D-loops. J Mol Biol 270: 212-221.
    • (1997) J Mol Biol , vol.270 , pp. 212-221
    • McGlynn, P.1    Al-Deib, A.A.2    Liu, J.3    Marians, K.J.4    Lloyd, R.G.5
  • 46
    • 34247182657 scopus 로고    scopus 로고
    • RecQ promotes toxic recombination in cells lacking recombination intermediate-removal proteins
    • Magner, D.B., Blankschien, M.D., Lee, J.A., Pennington, J.M., Lupski, J.R., and Rosenberg, S.M. (2007) RecQ promotes toxic recombination in cells lacking recombination intermediate-removal proteins. Mol Cell 26: 273-286.
    • (2007) Mol Cell , vol.26 , pp. 273-286
    • Magner, D.B.1    Blankschien, M.D.2    Lee, J.A.3    Pennington, J.M.4    Lupski, J.R.5    Rosenberg, S.M.6
  • 47
    • 0034667947 scopus 로고    scopus 로고
    • The alpha subunit of E. coli RNA polymerase activates RNA binding by NusA
    • Mah, T.F., Kuznedelov, K., Mushegian, A., Severinov, K., and Greenblatt, J. (2000) The alpha subunit of E. coli RNA polymerase activates RNA binding by NusA. Genes Dev 14: 2664-2675.
    • (2000) Genes Dev , vol.14 , pp. 2664-2675
    • Mah, T.F.1    Kuznedelov, K.2    Mushegian, A.3    Severinov, K.4    Greenblatt, J.5
  • 48
    • 0029871788 scopus 로고    scopus 로고
    • Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82
    • Mahdi, A.A., Sharples, G.J., Mandal, T.N., and Lloyd, R.G. (1996) Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82. J Mol Biol 257: 561-573.
    • (1996) J Mol Biol , vol.257 , pp. 561-573
    • Mahdi, A.A.1    Sharples, G.J.2    Mandal, T.N.3    Lloyd, R.G.4
  • 49
    • 33746629428 scopus 로고    scopus 로고
    • Rep and PriA helicase activities prevent RecA from provoking unnecessary recombination during replication fork repair
    • Mahdi, A.A., Buckman, C., Harris, L., and Lloyd, R.G. (2006) Rep and PriA helicase activities prevent RecA from provoking unnecessary recombination during replication fork repair. Genes Dev 20: 2135-2147.
    • (2006) Genes Dev , vol.20 , pp. 2135-2147
    • Mahdi, A.A.1    Buckman, C.2    Harris, L.3    Lloyd, R.G.4
  • 50
    • 0027236687 scopus 로고
    • Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB and ruvC mutations
    • Mandal, T.N., Mahdi, A.A., Sharples, G.J., and Lloyd, R.G. (1993) Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB and ruvC mutations. J Bacteriol 175: 4325-4334.
    • (1993) J Bacteriol , vol.175 , pp. 4325-4334
    • Mandal, T.N.1    Mahdi, A.A.2    Sharples, G.J.3    Lloyd, R.G.4
  • 51
    • 0028148226 scopus 로고
    • Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication
    • Masai, H., Asai, T., Kubota, Y., Arai, K., and Kogoma, T. (1994) Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication. EMBO J 13: 5338-5345.
    • (1994) EMBO J , vol.13 , pp. 5338-5345
    • Masai, H.1    Asai, T.2    Kubota, Y.3    Arai, K.4    Kogoma, T.5
  • 52
    • 79952126098 scopus 로고    scopus 로고
    • Co-directional replication-transcription conflicts lead to replication restart
    • Merrikh, H., Machon, C., Grainger, W.H., Grossman, A.D., and Soultanas, P. (2011) Co-directional replication-transcription conflicts lead to replication restart. Nature 470: 554-557.
    • (2011) Nature , vol.470 , pp. 554-557
    • Merrikh, H.1    Machon, C.2    Grainger, W.H.3    Grossman, A.D.4    Soultanas, P.5
  • 53
    • 0036843139 scopus 로고    scopus 로고
    • The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
    • Messer, W. (2002) The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication. FEMS Microbiol Rev 26: 355-374.
    • (2002) FEMS Microbiol Rev , vol.26 , pp. 355-374
    • Messer, W.1
  • 54
    • 0023258963 scopus 로고
    • Mode of initiation of constitutive stable DNA replication in RNase H-defective mutants of Escherichia coli K-12
    • von Meyenburg, K., Boye, E., Skarstad, K., Koppes, L., and Kogoma, T. (1987) Mode of initiation of constitutive stable DNA replication in RNase H-defective mutants of Escherichia coli K-12. J Bacteriol 169: 2650-2658.
    • (1987) J Bacteriol , vol.169 , pp. 2650-2658
    • von Meyenburg, K.1    Boye, E.2    Skarstad, K.3    Koppes, L.4    Kogoma, T.5
  • 55
  • 56
    • 33947432388 scopus 로고    scopus 로고
    • Replication fork stalling at natural impediments
    • Mirkin, E.V., and Mirkin, S.M. (2007) Replication fork stalling at natural impediments. Microbiol Mol Biol Rev 71: 13-35.
    • (2007) Microbiol Mol Biol Rev , vol.71 , pp. 13-35
    • Mirkin, E.V.1    Mirkin, S.M.2
  • 57
    • 67650938441 scopus 로고    scopus 로고
    • RNA polymerase active center: the molecular engine of transcription
    • Nudler, E. (2009) RNA polymerase active center: the molecular engine of transcription. Annu Rev Biochem 78: 335-361.
    • (2009) Annu Rev Biochem , vol.78 , pp. 335-361
    • Nudler, E.1
  • 58
    • 0025836589 scopus 로고
    • Inactivation of the Escherichia coli PriA DNA replication protein induces the SOS response
    • Nurse, P., Zavitz, K.H., and Marians, K.J. (1991) Inactivation of the Escherichia coli PriA DNA replication protein induces the SOS response. J Bacteriol 173: 6686-6693.
    • (1991) J Bacteriol , vol.173 , pp. 6686-6693
    • Nurse, P.1    Zavitz, K.H.2    Marians, K.J.3
  • 59
    • 0033609883 scopus 로고    scopus 로고
    • Two modes of PriA binding to DNA
    • Nurse, P., Liu, J., and Marians, K.J. (1999) Two modes of PriA binding to DNA. J Biol Chem 274: 25026-25032.
    • (1999) J Biol Chem , vol.274 , pp. 25026-25032
    • Nurse, P.1    Liu, J.2    Marians, K.J.3
  • 60
    • 0021344444 scopus 로고
    • RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro
    • Ogawa, T., Pickett, G.G., Kogoma, T., and Kornberg, A. (1984) RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro. Proc Natl Acad Sci USA 81: 1040-1044.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 1040-1044
    • Ogawa, T.1    Pickett, G.G.2    Kogoma, T.3    Kornberg, A.4
  • 61
    • 0018666812 scopus 로고
    • Post-translational modification of Escherichia coli ribosomal protein S6
    • Reeh, S., and Pedersen, S. (1979) Post-translational modification of Escherichia coli ribosomal protein S6. Mol Gen Genet 173: 183-187.
    • (1979) Mol Gen Genet , vol.173 , pp. 183-187
    • Reeh, S.1    Pedersen, S.2
  • 62
    • 34249941504 scopus 로고    scopus 로고
    • Avoiding and resolving conflicts between DNA replication and transcription
    • Rudolph, C.J., Dhillon, P., Moore, T., and Lloyd, R.G. (2007a) Avoiding and resolving conflicts between DNA replication and transcription. DNA Repair (Amst) 6: 981-993.
    • (2007) DNA Repair (Amst) , vol.6 , pp. 981-993
    • Rudolph, C.J.1    Dhillon, P.2    Moore, T.3    Lloyd, R.G.4
  • 63
    • 33947327048 scopus 로고    scopus 로고
    • Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli
    • Rudolph, C.J., Upton, A.L., and Lloyd, R.G. (2007b) Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli. Genes Dev 21: 668-681.
    • (2007) Genes Dev , vol.21 , pp. 668-681
    • Rudolph, C.J.1    Upton, A.L.2    Lloyd, R.G.3
  • 64
    • 67651205866 scopus 로고    scopus 로고
    • Pathological replication in cells lacking RecG DNA translocase
    • Rudolph, C.J., Upton, A.L., Harris, L., and Lloyd, R.G. (2009a) Pathological replication in cells lacking RecG DNA translocase. Mol Microbiol 73: 352-366.
    • (2009) Mol Microbiol , vol.73 , pp. 352-366
    • Rudolph, C.J.1    Upton, A.L.2    Harris, L.3    Lloyd, R.G.4
  • 65
    • 70449560624 scopus 로고    scopus 로고
    • Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase
    • Rudolph, C.J., Upton, A.L., and Lloyd, R.G. (2009b) Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase. Mol Microbiol 74: 940-955.
    • (2009) Mol Microbiol , vol.74 , pp. 940-955
    • Rudolph, C.J.1    Upton, A.L.2    Lloyd, R.G.3
  • 66
    • 78951475725 scopus 로고    scopus 로고
    • RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli
    • Rudolph, C.J., Mahdi, A.A., Upton, A.L., and Lloyd, R.G. (2010a) RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli. Genetics 186: 473-492.
    • (2010) Genetics , vol.186 , pp. 473-492
    • Rudolph, C.J.1    Mahdi, A.A.2    Upton, A.L.3    Lloyd, R.G.4
  • 68
    • 0034123356 scopus 로고    scopus 로고
    • Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12
    • Sandler, S.J. (2000) Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12. Genetics 155: 487-497.
    • (2000) Genetics , vol.155 , pp. 487-497
    • Sandler, S.J.1
  • 69
    • 0033988501 scopus 로고    scopus 로고
    • Role of PriA in replication fork reactivation in Escherichia coli
    • Sandler, S.J., and Marians, K.J. (2000) Role of PriA in replication fork reactivation in Escherichia coli. J Bacteriol 182: 9-13.
    • (2000) J Bacteriol , vol.182 , pp. 9-13
    • Sandler, S.J.1    Marians, K.J.2
  • 70
    • 0029960337 scopus 로고    scopus 로고
    • Differential suppression of priA2:kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC
    • Sandler, S.J., Samra, H.S., and Clark, A.J. (1996) Differential suppression of priA2:kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC. Genetics 143: 5-13.
    • (1996) Genetics , vol.143 , pp. 5-13
    • Sandler, S.J.1    Samra, H.S.2    Clark, A.J.3
  • 71
    • 0032870793 scopus 로고    scopus 로고
    • dnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12
    • Sandler, S.J., Marians, K.J., Zavitz, K.H., Coutu, J., Parent, M.A., and Clark, A.J. (1999) dnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12. Mol Microbiol 34: 91-101.
    • (1999) Mol Microbiol , vol.34 , pp. 91-101
    • Sandler, S.J.1    Marians, K.J.2    Zavitz, K.H.3    Coutu, J.4    Parent, M.A.5    Clark, A.J.6
  • 72
    • 0025361131 scopus 로고
    • Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication
    • Sassanfar, M., and Roberts, J.W. (1990) Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication. J Mol Biol 212: 79-96.
    • (1990) J Mol Biol , vol.212 , pp. 79-96
    • Sassanfar, M.1    Roberts, J.W.2
  • 73
    • 0025967320 scopus 로고
    • Conjugational recombination in E. coli: Myths and mechanisms
    • Smith, G.R. (1991) Conjugational recombination in E. coli: Myths and mechanisms. Cell 64: 19-27.
    • (1991) Cell , vol.64 , pp. 19-27
    • Smith, G.R.1
  • 74
    • 0021919826 scopus 로고
    • A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes
    • Tabor, S., and Richardson, C.C. (1985) A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc Natl Acad Sci USA 82: 1074-1078.
    • (1985) Proc Natl Acad Sci USA , vol.82 , pp. 1074-1078
    • Tabor, S.1    Richardson, C.C.2
  • 75
    • 33645636759 scopus 로고    scopus 로고
    • Stabilization of a stalled replication fork by concerted actions of two helicases
    • Tanaka, T., and Masai, H. (2006) Stabilization of a stalled replication fork by concerted actions of two helicases. J Biol Chem 281: 3484-3493.
    • (2006) J Biol Chem , vol.281 , pp. 3484-3493
    • Tanaka, T.1    Masai, H.2
  • 76
    • 0026045416 scopus 로고
    • Escherichia coli rpoA mutation which impairs transcription of positively regulated systems
    • Thomas, M.S., and Glass, R.E. (1991) Escherichia coli rpoA mutation which impairs transcription of positively regulated systems. Mol Microbiol 5: 2719-2725.
    • (1991) Mol Microbiol , vol.5 , pp. 2719-2725
    • Thomas, M.S.1    Glass, R.E.2
  • 77
    • 0028049949 scopus 로고
    • Identification of a domain of Escherichia coli primase required for functional interaction with the DnaB helicase at the replication fork
    • Tougu, K., Peng, H., and Marians, K.J. (1994) Identification of a domain of Escherichia coli primase required for functional interaction with the DnaB helicase at the replication fork. J Biol Chem 269: 4675-4682.
    • (1994) J Biol Chem , vol.269 , pp. 4675-4682
    • Tougu, K.1    Peng, H.2    Marians, K.J.3
  • 78
    • 0037121936 scopus 로고    scopus 로고
    • Modulation of DNA repair by mutations flanking the DNA channel through RNA polymerase
    • Trautinger, B.W., and Lloyd, R.G. (2002) Modulation of DNA repair by mutations flanking the DNA channel through RNA polymerase. EMBO J 21: 6944-6953.
    • (2002) EMBO J , vol.21 , pp. 6944-6953
    • Trautinger, B.W.1    Lloyd, R.G.2
  • 79
    • 22544464455 scopus 로고    scopus 로고
    • RNA polymerase modulators and DNA repair activities resolve conflicts between DNA replication and transcription
    • Trautinger, B.W., Jaktaji, R.P., Rusakova, E., and Lloyd, R.G. (2005) RNA polymerase modulators and DNA repair activities resolve conflicts between DNA replication and transcription. Mol Cell 19: 247-258.
    • (2005) Mol Cell , vol.19 , pp. 247-258
    • Trautinger, B.W.1    Jaktaji, R.P.2    Rusakova, E.3    Lloyd, R.G.4
  • 80
    • 0030582737 scopus 로고    scopus 로고
    • The RecG branch migration protein of Escherichia coli dissociates R-loops
    • Vincent, S.D., Mahdi, A.A., and Lloyd, R.G. (1996) The RecG branch migration protein of Escherichia coli dissociates R-loops. J Mol Biol 264: 713-721.
    • (1996) J Mol Biol , vol.264 , pp. 713-721
    • Vincent, S.D.1    Mahdi, A.A.2    Lloyd, R.G.3
  • 81
    • 79551674938 scopus 로고    scopus 로고
    • Transcription termination maintains chromosome integrity
    • Washburn, R.S., and Gottesman, M.E. (2011) Transcription termination maintains chromosome integrity. Proc Natl Acad Sci USA 108: 792-797.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 792-797
    • Washburn, R.S.1    Gottesman, M.E.2
  • 82
    • 0021319941 scopus 로고
    • Processing of plasmid DNA during bacterial conjugation
    • Willetts, N., and Wilkins, B. (1984) Processing of plasmid DNA during bacterial conjugation. Microbiol Rev 48: 24-41.
    • (1984) Microbiol Rev , vol.48 , pp. 24-41
    • Willetts, N.1    Wilkins, B.2
  • 83
    • 77956628003 scopus 로고    scopus 로고
    • Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase
    • Zhang, J., Mahdi, A.A., Briggs, G.S., and Lloyd, R.G. (2010) Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase. Genetics 185: 23-37.
    • (2010) Genetics , vol.185 , pp. 23-37
    • Zhang, J.1    Mahdi, A.A.2    Briggs, G.S.3    Lloyd, R.G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.