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Volumn 191, Issue 11, 2009, Pages 3740-3746

Varying rate of RNA chain elongation during rrn transcription in Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; RNA POLYMERASE; BACTERIAL RNA; DNA DIRECTED RNA POLYMERASE; RNA 16S; RNA 23S;

EID: 66149088099     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00128-09     Document Type: Article
Times cited : (40)

References (23)
  • 1
    • 0025369425 scopus 로고
    • Antitermination of characterized transcription terminators by the Escherichia coli rrnG leader region
    • Albrechtsen, B., C. L. Squires, S. Li, and C. Squires. 1990. Antitermination of characterized transcription terminators by the Escherichia coli rrnG leader region. J. Mol. Biol. 213:123-134.
    • (1990) J. Mol. Biol. , vol.213 , pp. 123-134
    • Albrechtsen, B.1    Squires, C.L.2    Li, S.3    Squires, C.4
  • 2
    • 7444253928 scopus 로고    scopus 로고
    • Sequence-dependent kinetic model of transcription elongation by RNA polymerase
    • Bai, L., A. Shundrovsky, and M. D. Wang. 2004. Sequence-dependent kinetic model of transcription elongation by RNA polymerase. J. Mol. Biol. 344:335-340.
    • (2004) J. Mol. Biol. , vol.344 , pp. 335-340
    • Bai, L.1    Shundrovsky, A.2    Wang, M.D.3
  • 4
    • 0031886989 scopus 로고    scopus 로고
    • Initiation and velocity of chromosome replication in Escherichia coli B/r and K-12
    • Bipatnath, M., P. P. Dennis, and H. Bremer. 1998. Initiation and velocity of chromosome replication in Escherichia coli B/r and K-12. J. Bacteriol. 180:265-273.
    • (1998) J. Bacteriol. , vol.180 , pp. 265-273
    • Bipatnath, M.1    Dennis, P.P.2    Bremer, H.3
  • 5
    • 0015230585 scopus 로고
    • Co-transcription of 16s and 23s r-RNA in E. coli
    • Bremer, H., and L. Berry. 1971. Co-transcription of 16s and 23s r-RNA in E. coli. Nat. New Biol. 234:81-82.
    • (1971) Nat. New Biol. , vol.234 , pp. 81-82
    • Bremer, H.1    Berry, L.2
  • 6
    • 0000640710 scopus 로고    scopus 로고
    • Chapter 5.2.3, Modulation of chemical composition and other parameters of the cell at different exponential growth rates
    • 7 October posting date. R. Curtiss III et al. (ed.), ASM Press, Washington, DC
    • Bremer, H., and P. P. Dennis. 7 October 2008, posting date. Chapter 5.2.3, Modulation of chemical composition and other parameters of the cell at different exponential growth rates. In R. Curtiss III et al. (ed.), EcoSal - Escherichia coli and Salmonella: cellular and molecular biology. ASM Press, Washington, DC. http://www.ecosal.org.
    • (2008) EcoSal - Escherichia Coli and Salmonella: Cellular and Molecular Biology
    • Bremer, H.1    Dennis, P.P.2
  • 7
    • 0038760038 scopus 로고    scopus 로고
    • Free RNA polymerase and modeling global transcription in Escherichia coli
    • Bremer, H., P. P. Dennis, and M. Ehrenberg. 2003. Free RNA polymerase and modeling global transcription in Escherichia coli. Biochimie 85:597-609.
    • (2003) Biochimie , vol.85 , pp. 597-609
    • Bremer, H.1    Dennis, P.P.2    Ehrenberg, M.3
  • 8
    • 0027432869 scopus 로고
    • Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies
    • Condon, C., S. French, C. Squires, and C. L. Squires. 1993. Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies. EMBO J. 12:4305-4315.
    • (1993) EMBO J. , vol.12 , pp. 4305-4315
    • Condon, C.1    French, S.2    Squires, C.3    Squires, C.L.4
  • 9
    • 0015935327 scopus 로고
    • Regulation of ribonucleic acid synthesis in Escherichia coli B/r: An analysis of a shift-up. I. Ribosomal RNA chain growth rates
    • Dennis, P. P., and H. Bremer. 1973. Regulation of ribonucleic acid synthesis in Escherichia coli B/r: an analysis of a shift-up. I. Ribosomal RNA chain growth rates. J. Mol. Biol. 75:145-159.
    • (1973) J. Mol. Biol. , Issue.75 , pp. 145-159
    • Dennis, P.P.1    Bremer, H.2
  • 10
    • 10344265937 scopus 로고    scopus 로고
    • Control of rRNA synthesis in Escherichia coli: A systems biology approach
    • Dennis, P. P., M. Ehrenberg, and H. Bremer. 2004. Control of rRNA synthesis in Escherichia coli: a systems biology approach. Microbiol. Mol. Biol. Rev. 68:639-668.
    • (2004) Microbiol. Mol. Biol. Rev. , vol.68 , pp. 639-668
    • Dennis, P.P.1    Ehrenberg, M.2    Bremer, H.3
  • 11
    • 0038756088 scopus 로고    scopus 로고
    • Cooperation between RNA polymerase molecules in transcription elongation
    • DOI 10.1126/science.1083219
    • Epshtein, V., and E. Nudler. 2003. Cooperation between RNA polymerase molecules in transcription elongation. Science 300:801-805. (Pubitemid 36532116)
    • (2003) Science , vol.300 , Issue.5620 , pp. 801-805
    • Epshtein, V.1    Nudler, E.2
  • 12
    • 0019877865 scopus 로고
    • Rho-independent termination: Dyad symmetry in DNA causes RNA polymerase to pause during transcription in vitro
    • Farnham, P. J., and T. Platt. 1981. Rho-independent termination: dyad symmetry in DNA causes RNA polymerase to pause during transcription in vitro. Nucleic Acids Res. 9:563-577.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 563-577
    • Farnham, P.J.1    Platt, T.2
  • 13
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • Gillespie, D. 1977. Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem. 81:2340-2361.
    • (1977) J. Phys. Chem. , vol.81 , pp. 2340-2361
    • Gillespie, D.1
  • 14
    • 0026003204 scopus 로고
    • rRNA transcription rate in Escherichia coli
    • Gotta, S., O. L. Miller, and S. French. 1991. rRNA transcription rate in Escherichia coli. J. Bacteriol. 173:6647-6649.
    • (1991) J. Bacteriol. , vol.173 , pp. 6647-6649
    • Gotta, S.1    Miller, O.L.2    French, S.3
  • 15
    • 0019781404 scopus 로고
    • Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli
    • Kingston, R. E., and M. Chamberlin. 1981. Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli. Cell 27:523-531. (Pubitemid 12200789)
    • (1981) Cell , vol.27 , Issue.3 II , pp. 523-531
    • Kingston, R.E.1    Chamberlin, M.J.2
  • 16
    • 0031552174 scopus 로고    scopus 로고
    • The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase
    • Nudler, E., A. Mustaev, E. Lukhtanov, and A. Goldfarb. 1997. The RNADNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase. Cell 89:33-41. (Pubitemid 27180583)
    • (1997) Cell , vol.89 , Issue.1 , pp. 34-41
    • Nudler, E.1    Mustaev, A.2    Lukhtanov, E.3    Goldfarb, A.4
  • 17
    • 14244264774 scopus 로고    scopus 로고
    • Transcriptional polarity of rRNA operons of Escherichia coli nusA and nusB mutant strains
    • Quan, S., N. Zhang, S. French, and C. L. Squires. 2005. Transcriptional polarity of rRNA operons of Escherichia coli nusA and nusB mutant strains. J. Bacteriol. 187:1632-1638.
    • (2005) J. Bacteriol. , vol.187 , pp. 1632-1638
    • Quan, S.1    Zhang, N.2    French, S.3    Squires, C.L.4
  • 18
    • 0020316476 scopus 로고
    • Temperature dependence of RNA synthesis parameters in Escherichia coli
    • a.Ryals, J., R. Little, and H. Bremer. 1982. Temperature dependence of RNA synthesis parameters in Escherichia coli. J. Bacteriol. 151:879-887.
    • (1982) J. Bacteriol. , vol.151 , pp. 879-887
    • Ryals, J.1    Little, R.2    Bremer, H.3
  • 19
    • 0028227702 scopus 로고
    • The RNA chain elongation rate in Escherichia coli depends on the growth rate
    • Vogel, U., and K. F. Jensen. 1994. The RNA chain elongation rate in Escherichia coli depends on the growth rate. J. Bacteriol. 176:2807-2813.
    • (1994) J. Bacteriol. , vol.176 , pp. 2807-2813
    • Vogel, U.1    Jensen, K.F.2
  • 20
    • 0029166388 scopus 로고
    • Effects of the antiterminator BoxA on transcription elongation kinetics and ppGpp inhibition of transcription elongation in Escherichia coli
    • Vogel, U., and K. F. Jensen. 1995. Effects of the antiterminator BoxA on transcription elongation kinetics and ppGpp inhibition of transcription elongation in Escherichia coli. J. Biol. Chem. 270:18335-18340.
    • (1995) J. Biol. Chem. , vol.270 , pp. 18335-18340
    • Vogel, U.1    Jensen, K.F.2
  • 21
    • 0032811010 scopus 로고    scopus 로고
    • Increased rrn gene dosage causes intermittent transcription of rRNA in Escherichia coli
    • Voulgaris, J., S. French, R. L. Gourse, C. Squires, and C. L. Squires. 1999. Increased rrn gene dosage causes intermittent transcription of rRNA in Escherichia coli. J. Bacteriol. 181:4170-4175. (Pubitemid 29331372)
    • (1999) Journal of Bacteriology , vol.181 , Issue.14 , pp. 4170-4175
    • Voulgaris, J.1    French, S.2    Gourse, R.L.3    Squires, C.4    Squires, C.L.5
  • 22
    • 0033032384 scopus 로고    scopus 로고
    • Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG
    • Zellars, M., and C. L. Squires. 1999. Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG. Mol. Microbiol. 32:1296-1304.
    • (1999) Mol. Microbiol. , vol.32 , pp. 1296-1304
    • Zellars, M.1    Squires, C.L.2
  • 23
    • 0036818941 scopus 로고    scopus 로고
    • Kinetic properties of rrn promoters in E. coli
    • Zhang, X., P. Dennis, M. Ehrenberg, and H. Bremer. 2002. Kinetic properties of rrn promoters in E. coli. Biochimie 84:981-996.
    • (2002) Biochimie , vol.84 , pp. 981-996
    • Zhang, X.1    Dennis, P.2    Ehrenberg, M.3    Bremer, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.