-
1
-
-
84908251017
-
Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution
-
Chen B C et al 2014 Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution Science 346 1257998.
-
(2014)
Science
, vol.346
, pp. 1257998
-
-
Chen, B.C.1
-
2
-
-
33645798851
-
The fluorescent toolbox for assessing protein location and function
-
Giepmans B, Adams S, Ellisman M and Tsien R 2006 The fluorescent toolbox for assessing protein location and function Science 312 217-24.
-
(2006)
Science
, vol.312
, pp. 217-224
-
-
Giepmans, B.1
Adams, S.2
Ellisman, M.3
Tsien, R.4
-
3
-
-
0031663369
-
The green fluorescent protein
-
Tsien R Y 1998 The green fluorescent protein Annu. Rev. Biochem. 67 509-44.
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 509-544
-
-
Tsien, R.Y.1
-
4
-
-
30944467113
-
A guide for choosing fluorescent proteins
-
Shaner N, Steinbach P and Tsien R 2005 A guide for choosing fluorescent proteins Nat. Methods 2 905-9.
-
(2005)
Nat. Methods
, vol.2
, pp. 905-909
-
-
Shaner, N.1
Steinbach, P.2
Tsien, R.3
-
5
-
-
77955640606
-
Fluorescent proteins and their applications in imaging living cells and tissues
-
Chudakov D M, Matz M V, Lukyanov S and Lukyanov K A 2010 Fluorescent proteins and their applications in imaging living cells and tissues Physiol. Rev. 90 1103-63.
-
(2010)
Physiol. Rev.
, vol.90
, pp. 1103-1163
-
-
Chudakov, D.M.1
Matz, M.V.2
Lukyanov, S.3
Lukyanov, K.A.4
-
6
-
-
70350337095
-
Fluorescent proteins: A cell biologist's user guide
-
Snapp E L 2009 Fluorescent proteins: A cell biologist's user guide Trends Cell Biol. 19 649-55.
-
(2009)
Trends Cell Biol.
, vol.19
, pp. 649-655
-
-
Snapp, E.L.1
-
7
-
-
84902773575
-
Advances in fluorescence labeling strategies for dynamic cellular imaging
-
Dean K M and Palmer A E 2014 Advances in fluorescence labeling strategies for dynamic cellular imaging Nat. Chem. Biol. 10 512-23.
-
(2014)
Nat. Chem. Biol.
, vol.10
, pp. 512-523
-
-
Dean, K.M.1
Palmer, A.E.2
-
8
-
-
77449152432
-
Fluorescent proteins for live cell imaging: Opportunities, limitations, and challenges Iubmb
-
Wiedenmann J R, Oswald F and Nienhaus G U 2009 Fluorescent proteins for live cell imaging: opportunities, limitations, and challenges Iubmb Life 61 1029-42.
-
(2009)
Life
, vol.61
, pp. 1029-1042
-
-
Wiedenmann, J.R.1
Oswald, F.2
Nienhaus, G.U.3
-
9
-
-
0036489443
-
Green fluorescent protein (GFP): Applications, structure, and related photophysical behavior
-
Zimmer M 2002 Green fluorescent protein (GFP): Applications, structure, and related photophysical behavior Chem. Rev. 102 759-82.
-
(2002)
Chem. Rev.
, vol.102
, pp. 759-782
-
-
Zimmer, M.1
-
10
-
-
34547448862
-
Fluorescent proteins: Maturation, photochemistry and photophysics
-
Remington S J 2006 Fluorescent proteins: maturation, photochemistry and photophysics Curr. Opin. Struct. Biol. 16 714-21.
-
(2006)
Curr. Opin. Struct. Biol.
, vol.16
, pp. 714-721
-
-
Remington, S.J.1
-
11
-
-
84859899534
-
Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging
-
Ha T and Tinnefeld P 2012 Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging Annu. Rev. Phys. Chem. 63 595-617.
-
(2012)
Annu. Rev. Phys. Chem.
, vol.63
, pp. 595-617
-
-
Ha, T.1
Tinnefeld, P.2
-
12
-
-
1642453927
-
Photoreceptor proteins, 'star actors of modern times': A review of the functional dynamics in the structure of representative members of six different photoreceptor families
-
Van der Horst M A and Hellingwerf K J 2004 Photoreceptor proteins, 'star actors of modern times': A review of the functional dynamics in the structure of representative members of six different photoreceptor families Acc. Chem. Res. 37 13-20.
-
(2004)
Acc. Chem. Res.
, vol.37
, pp. 13-20
-
-
Van Der Horst, M.A.1
Hellingwerf, K.J.2
-
13
-
-
0024279594
-
In vitro attachment of bilins to apophycocyanin: I. Specific covalent adduct formation at cysteinyl residues involved in phycocyanobilin binding in C-phycocyanin
-
Arciero D M, Bryant D A and Glazer A N 1988 In vitro attachment of bilins to apophycocyanin: I. Specific covalent adduct formation at cysteinyl residues involved in phycocyanobilin binding in C-phycocyanin J. Biol. Chem. 263 18343-9.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 18343-18349
-
-
Arciero, D.M.1
Bryant, D.A.2
Glazer, A.N.3
-
14
-
-
0024279623
-
In vitro attachment of bilins to apophycocyanin: II. Determination of the structures of tryptic bilin peptides derived from the phycocyanobilin adduct
-
Arciero D M, Dallas J L and Glazer A N 1988 In vitro attachment of bilins to apophycocyanin: II. Determination of the structures of tryptic bilin peptides derived from the phycocyanobilin adduct J. Biol. Chem. 263 18350-7.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 18350-18357
-
-
Arciero, D.M.1
Dallas, J.L.2
Glazer, A.N.3
-
15
-
-
0024279617
-
In vitro attachment of bilins to apophycocyanin: III. Properties of the phycoerythrobilin adduct
-
Arciero D M, Dallas J L and Glazer A N 1988 In vitro attachment of bilins to apophycocyanin: III. Properties of the phycoerythrobilin adduct J. Biol. Chem. 263 18358-63.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 18358-18363
-
-
Arciero, D.M.1
Dallas, J.L.2
Glazer, A.N.3
-
16
-
-
70349297531
-
Constructing and exploiting the fluorescent protein paintbox
-
Tsien R Y 2009 Constructing and exploiting the fluorescent protein paintbox Angew. Chem. Int. Edn Engl. 48 5612-26.
-
(2009)
Angew. Chem. Int. Edn Engl.
, vol.48
, pp. 5612-5626
-
-
Tsien, R.Y.1
-
17
-
-
0031282480
-
The phytofluors: A new class of fluorescent protein probes
-
Murphy J T and Lagarias J C 1997 The phytofluors: A new class of fluorescent protein probes Curr. Biol. 7 870-6.
-
(1997)
Curr. Biol.
, vol.7
, pp. 870-876
-
-
Murphy, J.T.1
Lagarias, J.C.2
-
18
-
-
10644265997
-
Harnessing phytochrome's glowing potential
-
Lagariast J C and Fischer A J 2004 Harnessing phytochrome's glowing potential Proc. Natl Acad. Sci. 101 17334-9.
-
(2004)
Proc. Natl Acad. Sci.
, vol.101
, pp. 17334-17339
-
-
Lagariast, J.C.1
Fischer, A.J.2
-
19
-
-
65649113981
-
Mammalian expression of infrared fluorescent proteins engineered from a bacterial phytochrome
-
Shu X, Royant A, Lin M Z, Aguilera T A, Lev-Ram V, Steinbach P A and Tsien R Y 2009 Mammalian expression of infrared fluorescent proteins engineered from a bacterial phytochrome Science 324 804-7.
-
(2009)
Science
, vol.324
, pp. 804-807
-
-
Shu, X.1
Royant, A.2
Lin, M.Z.3
Aguilera, T.A.4
Lev-Ram, V.5
Steinbach, P.A.6
Tsien, R.Y.7
-
20
-
-
84878742725
-
Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals
-
Piatkevich K D, Subach F V and Verkhusha V V 2013 Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals Chem. Soc. Rev. 42 3441.
-
(2013)
Chem. Soc. Rev.
, vol.42
, pp. 3441
-
-
Piatkevich, K.D.1
Subach, F.V.2
Verkhusha, V.V.3
-
21
-
-
84903519960
-
Probes: Seeing in the near infrared
-
Marx V 2014 Probes: seeing in the near infrared Nat. Methods 11 717-20.
-
(2014)
Nat. Methods
, vol.11
, pp. 717-720
-
-
Marx, V.1
-
22
-
-
79961182814
-
Bright and stable near-infrared fluorescent protein for in vivo imaging
-
Filonov G S, Piatkevich K D, Ting L-M, Zhang J, Kim K and Verkhusha V V 2011 Bright and stable near-infrared fluorescent protein for in vivo imaging Nat. Biotechnol. 29 757-61.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 757-761
-
-
Filonov, G.S.1
Piatkevich, K.D.2
Ting, L.-M.3
Zhang, J.4
Kim, K.5
Verkhusha, V.V.6
-
23
-
-
84881481582
-
Near-infrared fluorescent proteins for multicolor in vivo imaging
-
Shcherbakova D M and Verkhusha V V 2013 Near-infrared fluorescent proteins for multicolor in vivo imaging Nat. Methods 10 751-4.
-
(2013)
Nat. Methods
, vol.10
, pp. 751-754
-
-
Shcherbakova, D.M.1
Verkhusha, V.V.2
-
24
-
-
84900840105
-
An improved monomeric infrared fluorescent protein for neuronal and tumour brain imaging
-
Yu D et al 2014 An improved monomeric infrared fluorescent protein for neuronal and tumour brain imaging Nat. Commun. 5 1-7.
-
(2014)
Nat. Commun.
, vol.5
, pp. 1-7
-
-
Yu, D.1
-
25
-
-
84883170184
-
A near-infrared BiFC reporter for in vivo imaging of protein-protein interactions
-
Filonov G S and Verkhusha V V 2013 A near-infrared BiFC reporter for in vivo imaging of protein-protein interactions Chem. Biol. 20 1078-86.
-
(2013)
Chem. Biol.
, vol.20
, pp. 1078-1086
-
-
Filonov, G.S.1
Verkhusha, V.V.2
-
26
-
-
84901847233
-
An infrared reporter to detect spatiotemporal dynamics of protein-protein interactions
-
Tchekanda E, Sivanesan D and Michnick S W 2014 An infrared reporter to detect spatiotemporal dynamics of protein-protein interactions Nat. Methods 11 641-4.
-
(2014)
Nat. Methods
, vol.11
, pp. 641-644
-
-
Tchekanda, E.1
Sivanesan, D.2
Michnick, S.W.3
-
27
-
-
84925372995
-
Rationally designed fluorogenic protease reporter visualizes spatiotemporal dynamics of apoptosis in vivo
-
To T-L, Piggott B J, Makhijani K, Yu D, Jan Y N and Shu X 2015 Rationally designed fluorogenic protease reporter visualizes spatiotemporal dynamics of apoptosis in vivo Proc. Natl Acad. Sci. 112 3338-43.
-
(2015)
Proc. Natl Acad. Sci.
, vol.112
, pp. 3338-3343
-
-
To, T.-L.1
Piggott, B.J.2
Makhijani, K.3
Yu, D.4
Jan, Y.N.5
Shu, X.6
-
28
-
-
78649595332
-
On the origin of fluorescence in bacteriophytochrome infrared fluorescent proteins
-
Samma A A, Johnson C K, Song S, Alvarez S and Zimmer M 2010 On the origin of fluorescence in bacteriophytochrome infrared fluorescent proteins J. Phys. Chem. B 114 15362-9.
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 15362-15369
-
-
Samma, A.A.1
Johnson, C.K.2
Song, S.3
Alvarez, S.4
Zimmer, M.5
-
29
-
-
77952688009
-
Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome
-
Toh K C, Stojkovic E A, van Stokkum I H M, Moffat K and Kennis J T M 2010 Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome Proc. Natl Acad. Sci. 107 9170-5.
-
(2010)
Proc. Natl Acad. Sci.
, vol.107
, pp. 9170-9175
-
-
Toh, K.C.1
Stojkovic, E.A.2
Van Stokkum, I.H.M.3
Moffat, K.4
Kennis, J.T.M.5
-
30
-
-
84906220820
-
Flavin-based fluorescent proteins: Emerging paradigms in biological imaging
-
Mukherjee A and Schroeder C M 2015 Flavin-based fluorescent proteins: Emerging paradigms in biological imaging Curr. Opin. Biotechnol. 31 16-23.
-
(2015)
Curr. Opin. Biotechnol.
, vol.31
, pp. 16-23
-
-
Mukherjee, A.1
Schroeder, C.M.2
-
31
-
-
84880672377
-
Advanced in vivo applications of blue light photoreceptors as alternative fluorescent proteins
-
Drepper T, Gensch T and Pohl M 2013 Advanced in vivo applications of blue light photoreceptors as alternative fluorescent proteins Photochem. Photobiol. Sci. 12 1125.
-
(2013)
Photochem. Photobiol. Sci.
, vol.12
, pp. 1125
-
-
Drepper, T.1
Gensch, T.2
Pohl, M.3
-
32
-
-
34147157826
-
Reporter proteins for in vivo fluorescence without oxygen
-
Drepper T, Eggert T, Circolone F, Heck A, Krauß U, Guterl J-K, Wendorff M, Losi A, Gärtner W and Jaeger K-E 2007 Reporter proteins for in vivo fluorescence without oxygen Nat. Biotechnol. 25 443-5.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 443-445
-
-
Drepper, T.1
Eggert, T.2
Circolone, F.3
Heck, A.4
Krauß, U.5
Guterl, J.-K.6
Wendorff, M.7
Losi, A.8
Gärtner, W.9
Jaeger, K.-E.10
-
33
-
-
58149378339
-
The photoreversible fluorescent protein iLOV outperforms GFP as a reporter of plant virus infection
-
Chapman S, Faulkner C, Kaiserli E, Garcia-Mata C, Savenkov E I, Roberts A G, Oparka K J and Christie J M 2008 The photoreversible fluorescent protein iLOV outperforms GFP as a reporter of plant virus infection Proc. Natl Acad. Sci. 105 20038-43.
-
(2008)
Proc. Natl Acad. Sci.
, vol.105
, pp. 20038-20043
-
-
Chapman, S.1
Faulkner, C.2
Kaiserli, E.3
Garcia-Mata, C.4
Savenkov, E.I.5
Roberts, A.G.6
Oparka, K.J.7
Christie, J.M.8
-
34
-
-
84862644823
-
Structural tuning of the fluorescent protein iLOV for improved photostability
-
Christie J M, Hitomi K, Arvai A S, Hartfield K A, Mettlen M, Pratt A J, Tainer J A and Getzoff E D 2012 Structural tuning of the fluorescent protein iLOV for improved photostability J. Biol. Chem. 287 22295-304.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 22295-22304
-
-
Christie, J.M.1
Hitomi, K.2
Arvai, A.S.3
Hartfield, K.A.4
Mettlen, M.5
Pratt, A.J.6
Tainer, J.A.7
Getzoff, E.D.8
-
35
-
-
77956596517
-
Flavin mononucleotide-based fluorescent reporter proteins outperform green fluorescent protein-like proteins as quantitative in vivo real-time reporters
-
Drepper T, Huber R, Heck A, Circolone F, Hillmer A K, Buchs J and Jaeger K E 2010 Flavin mononucleotide-based fluorescent reporter proteins outperform green fluorescent protein-like proteins as quantitative in vivo real-time reporters Appl. Environ. Microbiol. 76 5990-4.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 5990-5994
-
-
Drepper, T.1
Huber, R.2
Heck, A.3
Circolone, F.4
Hillmer, A.K.5
Buchs, J.6
Jaeger, K.E.7
-
36
-
-
79952131915
-
Flavin mononucleotide (FMN)-based fluorescent protein (FbFP) as reporter for gene expression in the anaerobe Bacteroides fragilis
-
Lobo L A, Smith C J and Rocha E R 2011 Flavin mononucleotide (FMN)-based fluorescent protein (FbFP) as reporter for gene expression in the anaerobe Bacteroides fragilis FEMS Microbiol. Lett. 317 67-74.
-
(2011)
FEMS Microbiol. Lett.
, vol.317
, pp. 67-74
-
-
Lobo, L.A.1
Smith, C.J.2
Rocha, E.R.3
-
37
-
-
79954523612
-
Genetic transformation of an obligate anaerobe, P. Gingivalis for FMN-green fluorescent protein expression in studying host-microbe interaction
-
Choi C H, DeGuzman J V, Lamont R J and Yilmaz Ö 2011 Genetic transformation of an obligate anaerobe, P. gingivalis for FMN-green fluorescent protein expression in studying host-microbe interaction PLoS One 6 e18499-8.
-
(2011)
PLoS One
, vol.6
, pp. e18499-e18508
-
-
Choi, C.H.1
DeGuzman, J.V.2
Lamont, R.J.3
Yilmaz, Ö.4
-
38
-
-
66749094194
-
Flavin mononucleotide-based fluorescent protein as an oxygenindependent reporter in Candida albicans and Saccharomyces cerevisiae
-
Tielker D, Eichhof I, Jaeger K E and Ernst J F 2009 Flavin mononucleotide-based fluorescent protein as an oxygenindependent reporter in Candida albicans and Saccharomyces cerevisiae Eukaryotic Cell 8 913-5.
-
(2009)
Eukaryotic Cell
, vol.8
, pp. 913-915
-
-
Tielker, D.1
Eichhof, I.2
Jaeger, K.E.3
Ernst, J.F.4
-
39
-
-
84866292806
-
Flavin mononucleotide-based fluorescent proteins function in mammalian cells without oxygen requirement
-
Walter J, Hausmann S, Drepper T, Puls M, Eggert T and Dihné M 2012 Flavin mononucleotide-based fluorescent proteins function in mammalian cells without oxygen requirement PLoS One 7 e43921.
-
(2012)
PLoS One
, vol.7
, pp. e43921
-
-
Walter, J.1
Hausmann, S.2
Drepper, T.3
Puls, M.4
Eggert, T.5
Dihné, M.6
-
40
-
-
84858734045
-
Real-time determination of intracellular oxygen in bacteria using a genetically encoded FRET-based biosensor
-
Potzkei J, Kunze M, Drepper T, Gensch T, Jaeger K-E and Büchs J 2012 Real-time determination of intracellular oxygen in bacteria using a genetically encoded FRET-based biosensor BMC Biol. 10 28.
-
(2012)
BMC Biol.
, vol.10
, pp. 28
-
-
Potzkei, J.1
Kunze, M.2
Drepper, T.3
Gensch, T.4
Jaeger, K.-E.5
Büchs, J.6
-
41
-
-
84901365094
-
The photophysics of LOV-based fluorescent proteins- new tools for cell biology
-
Wingen M, Potzkei J, Endres S, Casini G, Rupprecht C, Fahlke C, Krauß U, Jaeger K-E, Drepper T and Gensch T 2014 The photophysics of LOV-based fluorescent proteins- new tools for cell biology Photochem. Photobiol. Sci. 13 875-9.
-
(2014)
Photochem. Photobiol. Sci.
, vol.13
, pp. 875-879
-
-
Wingen, M.1
Potzkei, J.2
Endres, S.3
Casini, G.4
Rupprecht, C.5
Fahlke, C.6
Krauß, U.7
Jaeger, K.-E.8
Drepper, T.9
Gensch, T.10
-
42
-
-
79955504165
-
A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms
-
Shu X, Lev-Ram V, Deerinck T J, Qi Y, Ramko E B, Davidson M W, Jin Y, Ellisman M H and Tsien R Y 2011 A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms PLoS Biol. 9 e1001041.
-
(2011)
PLoS Biol.
, vol.9
, pp. e1001041
-
-
Shu, X.1
Lev-Ram, V.2
Deerinck, T.J.3
Qi, Y.4
Ramko, E.B.5
Davidson, M.W.6
Jin, Y.7
Ellisman, M.H.8
Tsien, R.Y.9
-
43
-
-
84881510512
-
Flavoprotein miniSOG as a genetically encoded photosensitizer for cancer cells
-
Ryumina A P et al 2013 Flavoprotein miniSOG as a genetically encoded photosensitizer for cancer cells Biochim. Biophys. Acta 1830 5059-67.
-
(2013)
Biochim. Biophys. Acta
, vol.1830
, pp. 5059-5067
-
-
Ryumina, A.P.1
-
44
-
-
84860812078
-
Photoinducible cell ablation in Caenorhabditis elegans using the genetically encoded singlet oxygen generating protein miniSOG
-
Qi Y B, Garren E J, Shu X, Tsien R Y and Jin Y 2012 Photoinducible cell ablation in Caenorhabditis elegans using the genetically encoded singlet oxygen generating protein miniSOG Proc. Natl Acad. Sci. 109 7499-504.
-
(2012)
Proc. Natl Acad. Sci.
, vol.109
, pp. 7499-7504
-
-
Qi, Y.B.1
Garren, E.J.2
Shu, X.3
Tsien, R.Y.4
Jin, Y.5
-
45
-
-
84880688619
-
Optogenetic inhibition of synaptic release with chromophore-assisted light inactivation (CALI)
-
Lin J Y, Sann S B, Zhou K, Nabavi S, Proulx C D, Malinow R, Jin Y and Tsien R Y 2013 Optogenetic inhibition of synaptic release with chromophore-assisted light inactivation (CALI) Neuron 79 241-53.
-
(2013)
Neuron
, vol.79
, pp. 241-253
-
-
Lin, J.Y.1
Sann, S.B.2
Zhou, K.3
Nabavi, S.4
Proulx, C.D.5
Malinow, R.6
Jin, Y.7
Tsien, R.Y.8
-
46
-
-
84902122338
-
Singlet oxygen triplet energy transfer-based imaging technology for mapping protein- protein proximity in intact cells
-
To T-L, Fadul M J and Shu X 2014 Singlet oxygen triplet energy transfer-based imaging technology for mapping protein- protein proximity in intact cells Nat. Commun. 5 4072.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4072
-
-
To, T.-L.1
Fadul, M.J.2
Shu, X.3
-
47
-
-
84879420801
-
A bilirubininducible fluorescent protein from eel muscle
-
Kumagai A, Ando R, Miyatake H, Greimel P, Kobayashi T, Hirabayashi Y, Shimogori T and Miyawaki A 2013 A bilirubininducible fluorescent protein from eel muscle Cell 153 1602-11.
-
(2013)
Cell
, vol.153
, pp. 1602-1611
-
-
Kumagai, A.1
Ando, R.2
Miyatake, H.3
Greimel, P.4
Kobayashi, T.5
Hirabayashi, Y.6
Shimogori, T.7
Miyawaki, A.8
-
48
-
-
84902771399
-
How to control proteins with light in living systems
-
Gautier A, Gauron C, Volovitch M, Bensimon D, Jullien L and Vriz S 2014 How to control proteins with light in living systems Nat. Chem. Biol. 10 533-41.
-
(2014)
Nat. Chem. Biol.
, vol.10
, pp. 533-541
-
-
Gautier, A.1
Gauron, C.2
Volovitch, M.3
Bensimon, D.4
Jullien, L.5
Vriz, S.6
-
49
-
-
79960497713
-
Electrical spiking in Escherichia coli probed with a fluorescent voltage-indicating protein
-
Kralj J M, Hochbaum D R, Douglass A D and Cohen A E 2011 Electrical spiking in Escherichia coli probed with a fluorescent voltage-indicating protein Science 333 345-8.
-
(2011)
Science
, vol.333
, pp. 345-348
-
-
Kralj, J.M.1
Hochbaum, D.R.2
Douglass, A.D.3
Cohen, A.E.4
-
50
-
-
84856454418
-
Optical recording of action potentials in mammalian neurons using a microbial rhodopsin
-
Kralj J M, Douglass A D, Hochbaum D R, Maclaurin D and Cohen A E 2011 Optical recording of action potentials in mammalian neurons using a microbial rhodopsin Nat. Methods 9 90-5.
-
(2011)
Nat. Methods
, vol.9
, pp. 90-95
-
-
Kralj, J.M.1
Douglass, A.D.2
Hochbaum, D.R.3
Maclaurin, D.4
Cohen, A.E.5
-
51
-
-
84905281576
-
All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins
-
Hochbaum D R et al 2014 All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins Nat. Methods 11 825-33.
-
(2014)
Nat. Methods
, vol.11
, pp. 825-833
-
-
Hochbaum, D.R.1
-
53
-
-
0034644645
-
Blue-fluorescent antibodies
-
Simeonov A et al 2000 Blue-fluorescent antibodies Science 290 307-13.
-
(2000)
Science
, vol.290
, pp. 307-313
-
-
Simeonov, A.1
-
54
-
-
40049105717
-
Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex
-
Debler E W, Kaufmann G F, Meijler M M and Heine A 2008 Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex Science 319 1232-5.
-
(2008)
Science
, vol.319
, pp. 1232-1235
-
-
Debler, E.W.1
Kaufmann, G.F.2
Meijler, M.M.3
Heine, A.4
-
55
-
-
38949155234
-
Fluorogen-activating single-chain antibodies for imaging cell surface proteins
-
Szent-Gyorgyi C et al 2008 Fluorogen-activating single-chain antibodies for imaging cell surface proteins Nat. Biotechnol. 26 235-40.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 235-240
-
-
Szent-Gyorgyi, C.1
-
56
-
-
84882894834
-
Directed evolution of a fluorogen-activating single chain antibody for function and enhanced brightness in the cytoplasm
-
Yates B P, Peck M A and Berget P B 2012 Directed evolution of a fluorogen-activating single chain antibody for function and enhanced brightness in the cytoplasm Mol. Biotechnol. 54 829-41.
-
(2012)
Mol. Biotechnol.
, vol.54
, pp. 829-841
-
-
Yates, B.P.1
Peck, M.A.2
Berget, P.B.3
-
57
-
-
84929580947
-
Rapid, specific, no-wash, far-red fluorogen activation in subcellular compartments by targeted fluorogen activating proteins
-
Telmer C A, Verma R, Teng H, Andreko S, Law L and Bruchez M P 2015 Rapid, specific, no-wash, far-red fluorogen activation in subcellular compartments by targeted fluorogen activating proteins ACS Chem. Biol. 10 1239-46.
-
(2015)
ACS Chem. Biol.
, vol.10
, pp. 1239-1246
-
-
Telmer, C.A.1
Verma, R.2
Teng, H.3
Andreko, S.4
Law, L.5
Bruchez, M.P.6
-
58
-
-
52449109981
-
A rainbow of fluoromodules: A promiscuous scFv protein binds to and activates a diverse set of fluorogenic cyanine dyes
-
Ozhalici-Unal H, Pow C L, Marks S A, Jesper L D, Silva G L, Shank N I, Jones E W, Burnette J M, Berget P B and Armitage B A 2008 A rainbow of fluoromodules: A promiscuous scFv protein binds to and activates a diverse set of fluorogenic cyanine dyes J. Am. Chem. Soc. 130 12620-1.
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 12620-12621
-
-
Ozhalici-Unal, H.1
Pow, C.L.2
Marks, S.A.3
Jesper, L.D.4
Silva, G.L.5
Shank, N.I.6
Jones, E.W.7
Burnette, J.M.8
Berget, P.B.9
Armitage, B.A.10
-
59
-
-
79551676337
-
Blue fluorescent dye-protein complexes based on fluorogenic cyanine dyes and single chain antibody fragments
-
Zanotti K J, Silva G L, Creeger Y, Robertson K L, Waggoner A S, Berget P B and Armitage B A 2011 Blue fluorescent dye-protein complexes based on fluorogenic cyanine dyes and single chain antibody fragments Org. Biomol. Chem. 9 1012-20.
-
(2011)
Org. Biomol. Chem.
, vol.9
, pp. 1012-1020
-
-
Zanotti, K.J.1
Silva, G.L.2
Creeger, Y.3
Robertson, K.L.4
Waggoner, A.S.5
Berget, P.B.6
Armitage, B.A.7
-
60
-
-
70350347477
-
STED nanoscopy in living cells using fluorogen activating proteins
-
Fitzpatrick J A J, Yan Q, Sieber J J, Dyba M, Schwarz U, Szent-Gyorgyi C, Woolford C A, Berget P B, Waggoner A S and Bruchez M P 2009 STED nanoscopy in living cells using fluorogen activating proteins Bioconjug. Chem. 20 1843-7.
-
(2009)
Bioconjug. Chem.
, vol.20
, pp. 1843-1847
-
-
Fitzpatrick, J.A.J.1
Yan, Q.2
Sieber, J.J.3
Dyba, M.4
Schwarz, U.5
Szent-Gyorgyi, C.6
Woolford, C.A.7
Berget, P.B.8
Waggoner, A.S.9
Bruchez, M.P.10
-
61
-
-
84896400819
-
Localization microscopy using noncovalent fluorogen activation by genetically encoded fluorogen-activating proteins
-
Yan Q, Schwartz S L, Maji S, Huang F, Szent-Gyorgyi C, Lidke D S, Lidke K A and Bruchez M P 2014 Localization microscopy using noncovalent fluorogen activation by genetically encoded fluorogen-activating proteins ChemPhysChem 15 687-95.
-
(2014)
ChemPhysChem
, vol.15
, pp. 687-695
-
-
Yan, Q.1
Schwartz, S.L.2
Maji, S.3
Huang, F.4
Szent-Gyorgyi, C.5
Lidke, D.S.6
Lidke, K.A.7
Bruchez, M.P.8
-
62
-
-
84923322056
-
Fluorogen-activating proteins provide tunable labeling densities for tracking FcϵRI independent of IgE
-
Schwartz S L, Yan Q, Telmer C A, Lidke K A, Bruchez M P and Lidke D S 2015 Fluorogen-activating proteins provide tunable labeling densities for tracking FcϵRI independent of IgE ACS Chem. Biol. 10 539-46.
-
(2015)
ACS Chem. Biol.
, vol.10
, pp. 539-546
-
-
Schwartz, S.L.1
Yan, Q.2
Telmer, C.A.3
Lidke, K.A.4
Bruchez, M.P.5
Lidke, D.S.6
-
63
-
-
84860849817
-
Genetically encoded pH sensor for tracking surface proteins through endocytosis
-
Grover A, Schmidt B F, Salter R D, Watkins S C, Waggoner A S and Bruchez M P 2012 Genetically encoded pH sensor for tracking surface proteins through endocytosis Angew. Chem. Int. Edn 51 4838-42.
-
(2012)
Angew. Chem. Int. Edn
, vol.51
, pp. 4838-4842
-
-
Grover, A.1
Schmidt, B.F.2
Salter, R.D.3
Watkins, S.C.4
Waggoner, A.S.5
Bruchez, M.P.6
-
65
-
-
78349313682
-
How to obtain labeled proteins and what to do with them
-
Hinner M J and Johnsson K 2010 How to obtain labeled proteins and what to do with them Curr. Opin. Biotechnol. 21 766-76.
-
(2010)
Curr. Opin. Biotechnol.
, vol.21
, pp. 766-776
-
-
Hinner, M.J.1
Johnsson, K.2
-
67
-
-
0032503999
-
Specific covalent labeling of recombinant protein molecules inside live cells
-
Griffin B, Adams S and Tsien R 1998 Specific covalent labeling of recombinant protein molecules inside live cells Science 281 269-72.
-
(1998)
Science
, vol.281
, pp. 269-272
-
-
Griffin, B.1
Adams, S.2
Tsien, R.3
-
68
-
-
0037140742
-
New biarsenical ligands and tetracysteine motifs for protein labeling in vitro and in vivo: Synthesis and biological applications
-
Adams S, Campbell R, Gross L, Martin B, Walkup G, Yao Y, Llopis J and Tsien R 2002 New biarsenical ligands and tetracysteine motifs for protein labeling in vitro and in vivo: synthesis and biological applications J. Am. Chem. Soc. 124 6063-76.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 6063-6076
-
-
Adams, S.1
Campbell, R.2
Gross, L.3
Martin, B.4
Walkup, G.5
Yao, Y.6
Llopis, J.7
Tsien, R.8
-
69
-
-
0037225952
-
A general method for the covalent labeling of fusion proteins with small molecules in vivo
-
Keppler A, Gendreizig S, Gronemeyer T, Pick H, Vogel H and Johnsson K 2003 A general method for the covalent labeling of fusion proteins with small molecules in vivo Nat. Biotechnol. 21 86-9.
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 86-89
-
-
Keppler, A.1
Gendreizig, S.2
Gronemeyer, T.3
Pick, H.4
Vogel, H.5
Johnsson, K.6
-
70
-
-
3042798464
-
Labeling of fusion proteins with synthetic fluorophores in live cells
-
Keppler A, Pick H, Arrivoli C, Vogel H and Johnsson K 2004 Labeling of fusion proteins with synthetic fluorophores in live cells Proc. Natl Acad. Sci. 101 9955-9.
-
(2004)
Proc. Natl Acad. Sci.
, vol.101
, pp. 9955-9959
-
-
Keppler, A.1
Pick, H.2
Arrivoli, C.3
Vogel, H.4
Johnsson, K.5
-
71
-
-
39149145486
-
An engineered protein tag for multiprotein labeling in living cells
-
Gautier A, Juillerat A, Heinis C, Corrêa I R Jr, Kindermann M, Beaufils F and Johnsson K 2008 An engineered protein tag for multiprotein labeling in living cells Chem. Biol. 15 128-36.
-
(2008)
Chem. Biol.
, vol.15
, pp. 128-136
-
-
Gautier, A.1
Juillerat, A.2
Heinis, C.3
Corrêa, I.R.4
Kindermann, M.5
Beaufils, F.6
Johnsson, K.7
-
72
-
-
48049092838
-
HaloTag: A novel protein labeling technology for cell imaging and protein analysis
-
Los G et al 2008 HaloTag: A novel protein labeling technology for cell imaging and protein analysis ACS Chem. Biol. 3 373-82.
-
(2008)
ACS Chem. Biol.
, vol.3
, pp. 373-382
-
-
Los, G.1
-
73
-
-
84873819714
-
A near-infrared fluorophore for livecell super-resolution microscopy of cellular proteins
-
Lukinavicius G et al 2013 A near-infrared fluorophore for livecell super-resolution microscopy of cellular proteins Nat. Chem. 5 132-9.
-
(2013)
Nat. Chem.
, vol.5
, pp. 132-139
-
-
Lukinavicius, G.1
-
74
-
-
84903601874
-
Fluorogenic probes for live-cell imaging of the cytoskeleton
-
Lukinavicius G et al 2014 Fluorogenic probes for live-cell imaging of the cytoskeleton Nat. Methods 11 731-3.
-
(2014)
Nat. Methods
, vol.11
, pp. 731-733
-
-
Lukinavicius, G.1
-
75
-
-
84883073819
-
Development of fluorogenic probes for quick no-wash live-cell imaging of intracellular proteins
-
Hori Y, Norinobu T, Sato M, Arita K, Shirakawa M and Kikuchi K 2013 Development of fluorogenic probes for quick no-wash live-cell imaging of intracellular proteins J. Am. Chem. Soc. 135 12360-5.
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 12360-12365
-
-
Hori, Y.1
Norinobu, T.2
Sato, M.3
Arita, K.4
Shirakawa, M.5
Kikuchi, K.6
-
76
-
-
84921884040
-
Turn-on protein fluorescence: In situ formation of cyanine dyes
-
Yapici I, Lee K S S, Berbasova T, Nosrati M, Jia X, Vasileiou C, Wang W, Santos E M, Geiger J H and Borhan B 2015 'Turn-on' protein fluorescence: In situ formation of cyanine dyes J. Am. Chem. Soc. 137 1073-80.
-
(2015)
J. Am. Chem. Soc.
, vol.137
, pp. 1073-1080
-
-
Yapici, I.1
Lee, K.S.S.2
Berbasova, T.3
Nosrati, M.4
Jia, X.5
Vasileiou, C.6
Wang, W.7
Santos, E.M.8
Geiger, J.H.9
Borhan, B.10
-
77
-
-
0344430112
-
Aptamers switch on fluorescence of triphenylmethane dyes
-
Babendure J R, Adams S R and Tsien R Y 2003 Aptamers switch on fluorescence of triphenylmethane dyes J. Am. Chem. Soc. 125 14716-7.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 14716-14717
-
-
Babendure, J.R.1
Adams, S.R.2
Tsien, R.Y.3
-
78
-
-
65449131152
-
Imaging intracellular RNA distribution and dynamics in living cells
-
Tyagi S 2009 Imaging intracellular RNA distribution and dynamics in living cells Nat. Methods 6 331-8.
-
(2009)
Nat. Methods
, vol.6
, pp. 331-338
-
-
Tyagi, S.1
-
79
-
-
83055184268
-
Imaging of RNA in live cells
-
Armitage B A 2011 Imaging of RNA in live cells Curr. Opin. Chem. Biol. 15 806-12.
-
(2011)
Curr. Opin. Chem. Biol.
, vol.15
, pp. 806-812
-
-
Armitage, B.A.1
-
80
-
-
84906748293
-
Genetically encoded tools for RNA imaging in living cells
-
Rath A K and Rentmeister A 2015 Genetically encoded tools for RNA imaging in living cells Curr. Opin. Biotechnol. 31 42-9.
-
(2015)
Curr. Opin. Biotechnol.
, vol.31
, pp. 42-49
-
-
Rath, A.K.1
Rentmeister, A.2
-
82
-
-
4344641247
-
Chemical biology-green fluorescent RNA
-
Famulok M 2004 Chemical biology-green fluorescent RNA Nature 430 976-7.
-
(2004)
Nature
, vol.430
, pp. 976-977
-
-
Famulok, M.1
-
83
-
-
27544478113
-
A strategy for the development of small-molecule-based sensors that strongly fluoresce when bound to a specific RNA
-
Sparano B A and Koide K 2005 A strategy for the development of small-molecule-based sensors that strongly fluoresce when bound to a specific RNA J. Am. Chem. Soc. 127 14954-5.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 14954-14955
-
-
Sparano, B.A.1
Koide, K.2
-
84
-
-
50249150245
-
2008 Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: A blue fluorescent
-
Sando S, Narita A, Hayami M and Aoyama Y 2008 Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: A blue fluorescent RNA Chem. Commun. 3858-4.
-
RNA Chem. Commun.
, pp. 3858-3864
-
-
Sando, S.1
Narita, A.2
Hayami, M.3
Aoyama, Y.4
-
85
-
-
44449122485
-
Synthesis of new fluorogenic cyanine dyes and incorporation into RNA fluoromodules
-
Constantin T P, Silva G L, Robertson K L, Hamilton T P, Fague K, Waggoner A S and Armitage B A 2008 Synthesis of new fluorogenic cyanine dyes and incorporation into RNA fluoromodules Org. Lett. 10 1561-4.
-
(2008)
Org. Lett.
, vol.10
, pp. 1561-1564
-
-
Constantin, T.P.1
Silva, G.L.2
Robertson, K.L.3
Hamilton, T.P.4
Fague, K.5
Waggoner, A.S.6
Armitage, B.A.7
-
86
-
-
65849084573
-
Light-up properties of complexes between thiazole orange-small molecule conjugates and aptamers
-
Pei R, Rothman J, Xie Y and Stojanovic M N 2009 Light-up properties of complexes between thiazole orange-small molecule conjugates and aptamers Nucl. Acid Res. 37 e59-9.
-
(2009)
Nucl. Acid Res.
, vol.37
, pp. e59-e69
-
-
Pei, R.1
Rothman, J.2
Xie, Y.3
Stojanovic, M.N.4
-
87
-
-
78649643879
-
2010 Combining SELEX screening and rational design to develop light-up fluorophore-RNA aptamer pairs for RNA tagging
-
Lee J, Lee K H, Jeon J, Dragulescu-Andrasi A, Xiao F and Rao J 2010 Combining SELEX screening and rational design to develop light-up fluorophore-RNA aptamer pairs for RNA tagging ACS Chem. Biol. 5 1065-74.
-
ACS Chem. Biol.
, vol.5
, pp. 1065-1074
-
-
Lee, J.1
Lee, K.H.2
Jeon, J.3
Dragulescu-Andrasi, A.4
Xiao, F.5
Rao, J.6
-
88
-
-
84908193573
-
RNA mango aptamer-fluorophore: A bright, high-affinity complex for RNA labeling and tracking
-
Dolgosheina E V, Jeng S C Y, Panchapakesan S S S, Cojocaru R, Chen P S K, Wilson P D, Hawkins N, Wiggins P A and Unrau P J 2014 RNA mango aptamer-fluorophore: A bright, high-affinity complex for RNA labeling and tracking ACS Chem. Biol. 9 2412-20.
-
(2014)
ACS Chem. Biol.
, vol.9
, pp. 2412-2420
-
-
Dolgosheina, E.V.1
Jeng, S.C.Y.2
Panchapakesan, S.S.S.3
Cojocaru, R.4
Chen, P.S.K.5
Wilson, P.D.6
Hawkins, N.7
Wiggins, P.A.8
Unrau, P.J.9
-
89
-
-
79960959180
-
RNA mimics of green fluorescent protein
-
Paige J S, Wu K Y and Jaffrey S R 2011 RNA mimics of green fluorescent protein Science 333 642-6.
-
(2011)
Science
, vol.333
, pp. 642-646
-
-
Paige, J.S.1
Wu, K.Y.2
Jaffrey, S.R.3
-
90
-
-
84888883550
-
A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat-containing RNA
-
Strack R L, Disney M D and Jaffrey S R 2013 A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat-containing RNA Nat. Methods 10 1219-24.
-
(2013)
Nat. Methods
, vol.10
, pp. 1219-1224
-
-
Strack, R.L.1
Disney, M.D.2
Jaffrey, S.R.3
-
91
-
-
0033065308
-
Shedding light on the dark and weakly fluorescent states of green fluorescent proteins
-
Weber W, Helms V, McCammon J A and Langhoff P W 1999 Shedding light on the dark and weakly fluorescent states of green fluorescent proteins Proc. Natl Acad. Sci. 96 6177-82.
-
(1999)
Proc. Natl Acad. Sci.
, vol.96
, pp. 6177-6182
-
-
Weber, W.1
Helms, V.2
McCammon, J.A.3
Langhoff, P.W.4
-
92
-
-
84878785970
-
Photochemical properties of Spinach and its use in selective imaging
-
Wang P, Querard J, Maurin S, Nath S S, Le Saux T, Gautier A and Jullien L 2013 Photochemical properties of Spinach and its use in selective imaging Chem. Sci. 4 2865-73.
-
(2013)
Chem. Sci.
, vol.4
, pp. 2865-2873
-
-
Wang, P.1
Querard, J.2
Maurin, S.3
Nath, S.S.4
Le, S.T.5
Gautier, A.6
Jullien, L.7
-
93
-
-
84905639191
-
Structural basis for activity of highly efficient RNA mimics of green fluorescent protein
-
Warner K D, Chen M C, Song W, Strack R L, Thorn A, Jaffrey S R and Ferré-D'Amaré A R 2014 Structural basis for activity of highly efficient RNA mimics of green fluorescent protein Nat. Struct. Mol. Biol. 21 658-63.
-
(2014)
Nat. Struct. Mol. Biol.
, vol.21
, pp. 658-663
-
-
Warner, K.D.1
Chen, M.C.2
Song, W.3
Strack, R.L.4
Thorn, A.5
Jaffrey, S.R.6
Ferré-D'Amaré, A.R.7
-
94
-
-
84858030373
-
Fluorescence imaging of cellular metabolites with RNA
-
Paige J S, Nguyen-Duc T, Song W and Jaffrey S R 2012 Fluorescence imaging of cellular metabolites with RNA Science 335 1194-4.
-
(2012)
Science
, vol.335
, pp. 1194-1204
-
-
Paige, J.S.1
Nguyen-Duc, T.2
Song, W.3
Jaffrey, S.R.4
-
95
-
-
84883455570
-
Imaging bacterial protein expression using genetically encoded RNA sensors
-
Song W, Strack R L and Jaffrey S R 2013 Imaging bacterial protein expression using genetically encoded RNA sensors Nat. Methods 10 873-5.
-
(2013)
Nat. Methods
, vol.10
, pp. 873-875
-
-
Song, W.1
Strack, R.L.2
Jaffrey, S.R.3
-
96
-
-
84930227077
-
Imaging metabolite dynamics in living cells using a spinach-based riboswitch
-
You M, Litke J L and Jaffrey S R 2015 Imaging metabolite dynamics in living cells using a spinach-based riboswitch Proc. Natl Acad. Sci. 112 E2756-6.
-
(2015)
Proc. Natl Acad. Sci.
, vol.112
, pp. E2756-E2766
-
-
You, M.1
Litke, J.L.2
Jaffrey, S.R.3
-
97
-
-
84893461417
-
Plug-and-play fluorophores extend the spectral properties of spinach
-
Song W, Strack R L, Svensen N and Jaffrey S R 2014 Plug-and-play fluorophores extend the spectral properties of spinach J. Am. Chem. Soc. 136 1198-201.
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 1198-1201
-
-
Song, W.1
Strack, R.L.2
Svensen, N.3
Jaffrey, S.R.4
-
98
-
-
84913570361
-
Broccoli: Rapid selection of an RNA mimic of green fluorescent protein by fluorescence-based selection and directed evolution
-
Filonov G S, Moon J D, Svensen N and Jaffrey S R 2014 Broccoli: Rapid selection of an RNA mimic of green fluorescent protein by fluorescence-based selection and directed evolution J. Am. Chem. Soc. 136 16299-308.
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 16299-16308
-
-
Filonov, G.S.1
Moon, J.D.2
Svensen, N.3
Jaffrey, S.R.4
|