-
1
-
-
82755187338
-
Intracellular protein degradation: From a vague idea thru the lysosome and the ubiquitin-proteasome system and onto human diseases and drug targeting
-
Ciechanover, A. (2012) Intracellular protein degradation: from a vague idea thru the lysosome and the ubiquitin-proteasome system and onto human diseases and drug targeting. Biochim. Biophys. Acta 1824, 3-13
-
(2012)
Biochim. Biophys. Acta
, vol.1824
, pp. 3-13
-
-
Ciechanover, A.1
-
2
-
-
84878934964
-
Ubiquitin ligases and cell cycle control
-
Teixeira, L. K., and Reed, S. I. (2013) Ubiquitin ligases and cell cycle control. Annu. Rev. Biochem. 82, 387-414
-
(2013)
Annu. Rev. Biochem
, Issue.82
, pp. 387-414
-
-
Teixeira, L.K.1
Reed, S.I.2
-
3
-
-
84887619506
-
Dynamic regulation of ubiquitin-dependent cell cycle control
-
Craney, A., and Rape, M. (2013) Dynamic regulation of ubiquitin-dependent cell cycle control. Curr. Opin. Cell Biol. 25, 704-710
-
(2013)
Curr. Opin. Cell Biol
, vol.25
, pp. 704-710
-
-
Craney, A.1
Rape, M.2
-
4
-
-
84861869979
-
Ubiquitin and proteasomes in transcription
-
Geng, F., Wenzel, S., and Tansey, W. P. (2012) Ubiquitin and proteasomes in transcription. Annu. Rev. Biochem. 81, 177-201
-
(2012)
Annu. Rev. Biochem
, vol.81
, pp. 177-201
-
-
Geng, F.1
Wenzel, S.2
Tansey, W.P.3
-
5
-
-
79251596169
-
Proteolytic and non-proteolytic roles of ubiquitin and the ubiquitin proteasome system in transcriptional regulation
-
Bhat, K. P., and Greer, S. F. (2011) Proteolytic and non-proteolytic roles of ubiquitin and the ubiquitin proteasome system in transcriptional regulation. Biochim. Biophys. Acta 1809, 150-155
-
(2011)
Biochim. Biophys. Acta
, vol.1809
, pp. 150-155
-
-
Bhat, K.P.1
Greer, S.F.2
-
6
-
-
0027980321
-
The ubiquitin-proteasome pathway is required for processing the nf-b1 precursor protein and the activation of nf-b
-
Palombella, V. J., Rando, O. J., Goldberg, A. L., and Maniatis, T. (1994) The ubiquitin-proteasome pathway is required for processing the NF-B1 precursor protein and the activation of NF-B. Cell 78, 773-785
-
(1994)
Cell
, vol.78
, pp. 773-785
-
-
Palombella, V.J.1
Rando, O.J.2
Goldberg, A.L.3
Maniatis, T.4
-
7
-
-
11244273938
-
Both proteasomes and lysosomes degrade the activated erythropoietin receptor
-
Walrafen, P., Verdier, F., Kadri, Z., Chrétien, S., Lacombe, C., and Mayeux, P. (2005) Both proteasomes and lysosomes degrade the activated erythropoietin receptor. Blood 105, 600-608
-
(2005)
Blood
, vol.105
, pp. 600-608
-
-
Walrafen, P.1
Verdier, F.2
Kadri, Z.3
Chrétien, S.4
Lacombe, C.5
Mayeux, P.6
-
8
-
-
0034548716
-
Involvement of the ubiquitin-proteasome pathway in the degradation of nontyrosine kinase-type cytokine receptors of il-9, il-2, and erythropoietin
-
Yen, C. H., Yang, Y. C., Ruscetti, S. K., Kirken, R. A., Dai, R. M., and Li, C. C. (2000) Involvement of the ubiquitin-proteasome pathway in the degradation of nontyrosine kinase-type cytokine receptors of IL-9, IL-2, and erythropoietin. J. Immunol. 165, 6372-6380
-
(2000)
J. Immunol
, vol.165
, pp. 6372-6380
-
-
Yen, C.H.1
Yang, Y.C.2
Ruscetti, S.K.3
Kirken, R.A.4
Dai, R.M.5
Li, C.C.6
-
9
-
-
0033967491
-
Phosphorylation of human progesterone receptors at serine-294 by mitogen-Activated protein kinase signals their degradation by the 26s proteasome
-
Lange, C. A., Shen, T., and Horwitz, K. B. (2000) Phosphorylation of human progesterone receptors at serine-294 by mitogen-Activated protein kinase signals their degradation by the 26S proteasome. Proc. Natl. Acad. Sci. U.S.A. 97, 1032-1037
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 1032-1037
-
-
Lange, C.A.1
Shen, T.2
Horwitz, K.B.3
-
10
-
-
0033392493
-
Ubiquitin ligase activity and tyrosine phosphorylation underlie suppression of growth factor signaling by c-cbl/sli-1
-
Levkowitz, G., Waterman, H., Ettenberg, S. A., Katz, M., Tsygankov, A. Y., Alroy, I., Lavi, S., Iwai, K., Reiss, Y., Ciechanover, A., Lipkowitz, S., and Yarden, Y. (1999) Ubiquitin ligase activity and tyrosine phosphorylation underlie suppression of growth factor signaling by c-Cbl/Sli-1. Mol. Cell 4, 1029-1040
-
(1999)
Mol . Cell
, vol.4
, pp. 1029-1040
-
-
Levkowitz, G.1
Waterman, H.2
Ettenberg, S.A.3
Katz, M.4
Tsygankov, A.Y.5
Alroy, I.6
Lavi, S.7
Iwai, K.8
Reiss, Y.9
Ciechanover, A.10
Lipkowitz, S.11
Yarden, Y.12
-
11
-
-
0031045984
-
Degradation of the met tyrosine kinase receptor by the ubiquitin-proteasome pathway
-
Jeffers, M., Taylor, G. A., Weidner, K. M., Omura, S., and Vande Woude, G. F. (1997) Degradation of the Met tyrosine kinase receptor by the ubiquitin-proteasome pathway. Mol. Cell. Biol. 17, 799-808
-
(1997)
Mol. Cell. Biol
, vol.17
, pp. 799-808
-
-
Jeffers, M.1
Taylor, G.A.2
Weidner, K.M.3
Omura, S.4
Woude, V.G.F.5
-
12
-
-
0028788180
-
Degradation process of ligand-stimulated platelet-derived growth factor-receptor involves ubiquitin-proteasome proteolytic pathway
-
Mori, S., Tanaka, K., Omura, S., and Saito, Y. (1995) Degradation process of ligand-stimulated platelet-derived growth factor-receptor involves ubiquitin-proteasome proteolytic pathway. J. Biol. Chem. 270, 29447-29452
-
(1995)
J. Biol. Chem
, vol.270
, pp. 29447-29452
-
-
Mori, S.1
Tanaka, K.2
Omura, S.3
Saito, Y.4
-
13
-
-
84890534490
-
Regulation of tgf-family signalling by ubiquitination and deubiquitination
-
Imamura, T., Oshima, Y., and Hikita, A. (2013) Regulation of TGF-family signalling by ubiquitination and deubiquitination. J. Biochem. 154, 481-489
-
(2013)
J. Biochem
, vol.154
, pp. 481-489
-
-
Imamura, T.1
Oshima, Y.2
Hikita, A.3
-
14
-
-
0034711290
-
Smurf2 is a ubiquitin e3 ligase mediating proteasome-dependent degradation of smad2 in transforming growth factor-signaling
-
Lin, X., Liang, M., and Feng, X. H. (2000) Smurf2 is a ubiquitin E3 ligase mediating proteasome-dependent degradation of Smad2 in transforming growth factor-signaling. J. Biol. Chem. 275, 36818-36822
-
(2000)
J. Biol. Chem
, vol.275
, pp. 36818-36822
-
-
Lin, X.1
Liang, M.2
Feng, X.H.3
-
15
-
-
0033974063
-
Posttranslational modification of bcl-2 facilitates its proteasomedependent degradation: Molecular characterization of the involved signaling pathway
-
Breitschopf, K., Haendeler, J., Malchow, P., Zeiher, A. M., and Dimmeler, S. (2000) Posttranslational modification of Bcl-2 facilitates its proteasomedependent degradation: molecular characterization of the involved signaling pathway. Mol. Cell. Biol. 20, 1886-1896
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 1886-1896
-
-
Breitschopf, K.1
Haendeler, J.2
Malchow, P.3
Zeiher, A.M.4
Dimmeler, S.5
-
16
-
-
84934901165
-
Targeting cullin-ring e3 ubiquitin ligases for drug discovery: Structure, assembly and small-molecule modulation
-
Bulatov, E., and Ciulli, A. (2015) Targeting Cullin-RING E3 ubiquitin ligases for drug discovery: structure, assembly and small-molecule modulation. Biochem. J. 467, 365-386
-
(2015)
Biochem. J
, vol.467
, pp. 365-386
-
-
Bulatov, E.1
Ciulli, A.2
-
17
-
-
84907831745
-
Screening for e3-ubiquitin ligase inhibitors: Challenges and opportunities
-
Landré, V., Rotblat, B., Melino, S., Bernassola, F., and Melino, G. (2014) Screening for E3-ubiquitin ligase inhibitors: challenges and opportunities. Oncotarget. 5, 7988-8013
-
(2014)
Oncotarget
, vol.5
, pp. 7988-8013
-
-
Landré, V.1
Rotblat, B.2
Melino, S.3
Bernassola, F.4
Melino, G.5
-
18
-
-
84918829142
-
Targeting the ubiquitin pathway for cancer treatment
-
Liu, J., Shaik, S., Dai, X., Wu, Q., Zhou, X., Wang, Z., and Wei, W. (2015) Targeting the ubiquitin pathway for cancer treatment. Biochim. Biophys. Acta 1855, 50-60
-
(2015)
Biochim. Biophys. Acta
, vol.1855
, pp. 50-60
-
-
Liu, J.1
Shaik, S.2
Dai, X.3
Wu, Q.4
Zhou, X.5
Wang, Z.6
Wei, W.7
-
19
-
-
84927176668
-
Scf ubiquitin ligasetargeted therapies
-
Skaar, J. R., Pagan, J. K., and Pagano, M. (2014) SCF ubiquitin ligasetargeted therapies. Nat. Rev. Drug Discov. 13, 889-903
-
(2014)
Nat. Rev. Drug Discov
, vol.13
, pp. 889-903
-
-
Skaar, J.R.1
Pagan, J.K.2
Pagano, M.3
-
20
-
-
84878437599
-
Functional diversity and structural disorder in the human ubiquitination pathway
-
Bhowmick, P., Pancsa, R., Guharoy, M., and Tompa, P. (2013) Functional diversity and structural disorder in the human ubiquitination pathway. PLoS ONE 8, e65443
-
(2013)
PLoS ONE
, vol.8
, pp. e65443
-
-
Bhowmick, P.1
Pancsa, R.2
Guharoy, M.3
Tompa, P.4
-
22
-
-
45849153870
-
The hect family of e3 ubiquitin ligases: Multiple players in cancer development
-
Bernassola, F., Karin, M., Ciechanover, A., and Melino, G. (2008) The HECT family of E3 ubiquitin ligases: multiple players in cancer development. Cancer Cell 14, 10-21
-
(2008)
Cancer Cell
, vol.14
, pp. 10-21
-
-
Bernassola, F.1
Karin, M.2
Ciechanover, A.3
Melino, G.4
-
23
-
-
33751159209
-
Intracellular signaling by the unfolded protein response
-
Bernales, S., Papa, F. R., and Walter, P. (2006) Intracellular signaling by the unfolded protein response. Annu. Rev. Cell Dev. Biol. 22, 487-508
-
(2006)
Annu. Rev. Cell Dev. Biol
, vol.22
, pp. 487-508
-
-
Bernales, S.1
Papa, F.R.2
Walter, P.3
-
24
-
-
84928139542
-
A comprehensive method for detecting ubiquitinated substrates using tr-tube
-
Yoshida, Y., Saeki, Y., Murakami, A., Kawawaki, J., Tsuchiya, H., Yoshihara, H., Shindo, M., and Tanaka, K. (2015) A comprehensive method for detecting ubiquitinated substrates using TR-TUBE. Proc. Natl. Acad. Sci. U.S.A. 112, 4630-4635
-
(2015)
Proc. Natl. Acad. Sci. U.S.A
, vol.112
, pp. 4630-4635
-
-
Yoshida, Y.1
Saeki, Y.2
Murakami, A.3
Kawawaki, J.4
Tsuchiya, H.5
Yoshihara, H.6
Shindo, M.7
Tanaka, K.8
-
25
-
-
82355164206
-
Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels
-
Lee, K. A., Hammerle, L. P., Andrews, P. S., Stokes, M. P., Mustelin, T., Silva, J. C., Black, R. A., and Doedens, J. R. (2011) Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels. J. Biol. Chem. 286, 41530-41538
-
(2011)
J. Biol. Chem
, vol.286
, pp. 41530-41538
-
-
Lee, K.A.1
Hammerle, L.P.2
Andrews, P.S.3
Stokes, M.P.4
Mustelin, T.5
Silva, J.C.6
Black, R.A.7
Doedens, J.R.8
-
26
-
-
84897823745
-
Co-regulation proteomics reveals substrates and mechanisms of apc/c-dependent degradation
-
Singh, S. A., Winter, D., Kirchner, M., Chauhan, R., Ahmed, S., Ozlu, N., Tzur, A., Steen, J. A., and Steen, H. (2014) Co-regulation proteomics reveals substrates and mechanisms of APC/C-dependent degradation. EMBO J. 33, 385-399
-
(2014)
EMBO J
, vol.33
, pp. 385-399
-
-
Singh, S.A.1
Winter, D.2
Kirchner, M.3
Chauhan, R.4
Ahmed, S.5
Ozlu, N.6
Tzur, A.7
Steen, J.A.8
Steen, H.9
-
27
-
-
55849133733
-
Identification of scf ubiquitin ligase substrates by global protein stability profiling
-
Yen, H. C., and Elledge, S. J. (2008) Identification of SCF ubiquitin ligase substrates by global protein stability profiling. Science 322, 923-929
-
(2008)
Science
, vol.322
, pp. 923-929
-
-
Yen, H.C.1
Elledge, S.J.2
-
28
-
-
84872811929
-
Substrates of iap ubiquitin ligases identified with a designed orthogonal e3 ligase, the neddylator
-
Zhuang, M., Guan, S., Wang, H., Burlingame, A. L., and Wells, J. A. (2013) Substrates of IAP ubiquitin ligases identified with a designed orthogonal E3 ligase, the NEDDylator. Mol. Cell 49, 273-282
-
(2013)
Mol.Cell
, vol.49
, pp. 273-282
-
-
Zhuang, M.1
Guan, S.2
Wang, H.3
Burlingame, A.L.4
Wells, J.A.5
-
29
-
-
84920033620
-
Substrate trapping proteomics reveals targets of the-trcp2/fbxw11 ubiquitin ligase
-
Kim, T. Y., Siesser, P. F., Rossman, K. L., Goldfarb, D., Mackinnon, K., Yan, F., Yi, X., MacCoss, M. J., Moon, R. T., Der, C. J., and Major, M. B. (2015) Substrate trapping proteomics reveals targets of the-TrCP2/FBXW11 ubiquitin ligase. Mol. Cell. Biol. 35, 167-181
-
(2015)
Mol. Cell. Biol
, vol.35
, pp. 167-181
-
-
Kim, T.Y.1
Siesser, P.F.2
Rossman, K.L.3
Goldfarb, D.4
Mackinnon, K.5
Yan, F.6
Yi, X.7
MacCoss, M.J.8
Moon, R.T.9
Der, C.J.10
Major, M.B.11
-
30
-
-
50149086108
-
Diversity of degradation signals in the ubiquitin-proteasome system
-
Ravid, T., and Hochstrasser, M. (2008) Diversity of degradation signals in the ubiquitin-proteasome system. Nat. Rev. Mol. Cell Biol. 9, 679-690
-
(2008)
Nat. Rev. Mol. Cell Biol
, vol.9
, pp. 679-690
-
-
Ravid, T.1
Hochstrasser, M.2
-
31
-
-
84864609636
-
Regulatory modules: Coupling protein stability to phosphoregulation during cell division
-
Holt, L. J. (2012) Regulatory modules: Coupling protein stability to phosphoregulation during cell division. FEBS Lett. 586, 2773-2777
-
(2012)
FEBS Lett
, vol.586
, pp. 2773-2777
-
-
Holt, L.J.1
-
32
-
-
36749010218
-
The age of crosstalk: Phosphorylation, ubiquitination, and beyond
-
Hunter, T. (2007) The age of crosstalk: phosphorylation, ubiquitination, and beyond. Mol. Cell 28, 730-738
-
(2007)
Mol. Cell
, vol.28
, pp. 730-738
-
-
Hunter, T.1
-
33
-
-
32444437676
-
Activation of the e3 ubiquitin ligase itch through a phosphorylation-induced conformational change
-
Gallagher, E., Gao, M., Liu, Y. C., and Karin, M. (2006) Activation of the E3 ubiquitin ligase Itch through a phosphorylation-induced conformational change. Proc. Natl. Acad. Sci. U.S.A. 103, 1717-1722
-
(2006)
Proc. Natl. Acad. Sci. U.S.A
, vol.103
, pp. 1717-1722
-
-
Gallagher, E.1
Gao, M.2
Liu, Y.C.3
Karin, M.4
-
34
-
-
3142618052
-
Regulation of ubiquitin protein ligase activity in c-cbl by phosphorylation-induced conformational change and constitutive activation by tyrosine to glutamate point mutations
-
Kassenbrock, C. K., and Anderson, S. M. (2004) Regulation of ubiquitin protein ligase activity in c-Cbl by phosphorylation-induced conformational change and constitutive activation by tyrosine to glutamate point mutations. J. Biol. Chem. 279, 28017-28027
-
(2004)
J. Biol. Chem
, vol.279
, pp. 28017-28027
-
-
Kassenbrock, C.K.1
Anderson, S.M.2
-
35
-
-
84954288558
-
Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system
-
Guharoy, M., Bhowmick, P., Sallam, M., and Tompa, P. (2016) Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system. Nat. Commun. 7, 10239
-
(2016)
Nat. Commun
, vol.7
, pp. 10239
-
-
Guharoy, M.1
Bhowmick, P.2
Sallam, M.3
Tompa, P.4
-
36
-
-
84904469894
-
A million peptide motifs for the molecular biologist
-
Tompa, P., Davey, N. E., Gibson, T. J., and Babu, M. M. (2014) A million peptide motifs for the molecular biologist. Mol. Cell 55, 161-169
-
(2014)
Mol.Cell
, vol.55
, pp. 161-169
-
-
Tompa, P.1
Davey, N.E.2
Gibson, T.J.3
Babu, M.M.4
-
37
-
-
84925114160
-
Intrinsically disordered proteins in cellular signalling and regulation
-
Wright, P. E., and Dyson, H. J. (2015) Intrinsically disordered proteins in cellular signalling and regulation. Nat. Rev. Mol. Cell Biol. 16, 18-29
-
(2015)
Nat. Rev. Mol. Cell Biol
, vol.16
, pp. 18-29
-
-
Wright, P.E.1
Dyson, H.J.2
-
38
-
-
0033959744
-
Mdm2: Master regulator of the p53 tumor suppressor protein
-
Momand, J., Wu, H. H., and Dasgupta, G. (2000) MDM2: master regulator of the p53 tumor suppressor protein. Gene 242, 15-29
-
(2000)
Gene
, vol.242
, pp. 15-29
-
-
Momand, J.1
Wu, H.H.2
Dasgupta, G.3
-
39
-
-
0035949588
-
A phosphatidylinositol 3-kinase/akt pathway promotes translocation of mdm2 from the cytoplasm to the nucleus
-
Mayo, L. D., and Donner, D. B. (2001) A phosphatidylinositol 3-kinase/Akt pathway promotes translocation of Mdm2 from the cytoplasm to the nucleus. Proc. Natl. Acad. Sci. U.S.A. 98, 11598-11603
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, pp. 11598-11603
-
-
Mayo, L.D.1
Donner, D.B.2
-
40
-
-
0035736487
-
Her-2/neu induces p53 ubiquitination via akt-mediated mdm2 phosphorylation
-
Zhou, B. P., Liao, Y., Xia, W., Zou, Y., Spohn, B., and Hung, M. C. (2001) HER-2/neu induces p53 ubiquitination via Akt-mediated MDM2 phosphorylation. Nat. Cell Biol. 3, 973-982
-
(2001)
Nat. Cell Biol
, vol.3
, pp. 973-982
-
-
Zhou, B.P.1
Liao, Y.2
Xia, W.3
Zou, Y.4
Spohn, B.5
Hung, M.C.6
-
41
-
-
77954698850
-
Brca1 16 years later: Nuclear import and export processes
-
Thompson, M. E. (2010) BRCA1 16 years later: nuclear import and export processes. FEBS J. 277, 3072-3078
-
(2010)
FEBS J
, vol.277
, pp. 3072-3078
-
-
Thompson, M.E.1
-
42
-
-
33845916778
-
Regulation of the ring finger e3 ligase siah2 by p38 mapk
-
Khurana, A., Nakayama, K., Williams, S., Davis, R. J., Mustelin, T., and Ronai, Z. (2006) Regulation of the ring finger E3 ligase Siah2 by p38 MAPK. J. Biol. Chem. 281, 35316-35326
-
(2006)
J. Biol. Chem
, vol.281
, pp. 35316-35326
-
-
Khurana, A.1
Nakayama, K.2
Williams, S.3
Davis, R.J.4
Mustelin, T.5
Ronai, Z.6
-
43
-
-
84883465326
-
Regulators and effectors of siah ubiquitin ligases
-
Qi, J., Kim, H., Scortegagna, M., and Ronai, Z. A. (2013) Regulators and effectors of Siah ubiquitin ligases. Cell Biochem. Biophys. 67, 15-24
-
(2013)
Cell Biochem. Biophys
, vol.67
, pp. 15-24
-
-
Qi, J.1
Kim, H.2
Scortegagna, M.3
Ronai, Z.A.4
-
44
-
-
84860390194
-
Yeast ubiquitin ligase rsp5 contains nuclear localization and export signals. Eur
-
Cholbinski, P., Jastrzebska, Z., Wysocka-Kapcinska, M., Plochocka, D., Gornicka, A., Hopper, A. K., and Zoladek, T. (2011) Yeast ubiquitin ligase Rsp5 contains nuclear localization and export signals. Eur. J. Cell Biol. 90, 834-843
-
(2011)
J. Cell Biol
, vol.90
, pp. 834-843
-
-
Cholbinski, P.1
Jastrzebska, Z.2
Wysocka-Kapcinska, M.3
Plochocka, D.4
Gornicka, A.5
Hopper, A.K.6
Zoladek, T.7
-
45
-
-
0038339910
-
Role of nuclear and cytoplasmic localization in the tumour-suppressor activity of the von hippel-lindau protein
-
Lewis, M. D., and Roberts, B. J. (2003) Role of nuclear and cytoplasmic localization in the tumour-suppressor activity of the von Hippel-Lindau protein. Oncogene 22, 3992-3997
-
(2003)
Oncogene
, vol.22
, pp. 3992-3997
-
-
Lewis, M.D.1
Roberts, B.J.2
-
46
-
-
0035854796
-
Nuclear import/export of hrpf1/nedd4 regulates the ubiquitin-dependent degradation of its nuclear substrates
-
Hamilton, M. H., Tcherepanova, I., Huibregtse, J. M., and McDonnell, D. P. (2001) Nuclear import/export of hRPF1/Nedd4 regulates the ubiquitin-dependent degradation of its nuclear substrates. J. Biol. Chem. 276, 26324-26331
-
(2001)
J. Biol. Chem
, vol.276
, pp. 26324-26331
-
-
Hamilton, M.H.1
Tcherepanova, I.2
Huibregtse, J.M.3
McDonnell, D.P.4
-
47
-
-
20744449627
-
Nuclear-cytoplasmic shuttling of a ring-ibr protein rbck1 and its functional interaction with nuclear body proteins
-
Tatematsu, K., Yoshimoto, N., Koyanagi, T., Tokunaga, C., Tachibana, T., Yoneda, Y., Yoshida, M., Okajima, T., Tanizawa, K., and Kuroda, S. (2005) Nuclear-cytoplasmic shuttling of a RING-IBR protein RBCK1 and its functional interaction with nuclear body proteins. J. Biol. Chem. 280, 22937-22944
-
(2005)
J. Biol. Chem
, vol.280
, pp. 22937-22944
-
-
Tatematsu, K.1
Yoshimoto, N.2
Koyanagi, T.3
Tokunaga, C.4
Tachibana, T.5
Yoneda, Y.6
Yoshida, M.7
Okajima, T.8
Tanizawa, K.9
Kuroda, S.10
-
48
-
-
84857038069
-
Identification of essential sequences for cellular localization in the musclespecific ubiquitin e3 ligase mafbx/atrogin 1
-
Julie, L. C., Sabrina, B. P., Marie-Pierre, L., and Leibovitch, S. A. (2012) Identification of essential sequences for cellular localization in the musclespecific ubiquitin E3 ligase MAFbx/Atrogin 1. FEBS Lett. 586, 362-367
-
(2012)
FEBS Lett
, vol.586
, pp. 362-367
-
-
Julie, L.C.1
Sabrina, B.P.2
Marie-Pierre, L.3
Leibovitch, S.A.4
-
49
-
-
84862873871
-
On the supertertiary structure of proteins
-
Tompa, P. (2012) On the supertertiary structure of proteins. Nat. Chem. Biol. 8, 597-600
-
(2012)
Nat. Chem. Biol
, vol.8
, pp. 597-600
-
-
Tompa, P.1
-
50
-
-
84879525973
-
Macromolecular juggling by ubiquitylation enzymes
-
Lorenz, S., Cantor, A. J., Rape, M., and Kuriyan, J. (2013) Macromolecular juggling by ubiquitylation enzymes. BMC Biol. 11, 65
-
(2013)
BMC Biol
, vol.11
, pp. 65
-
-
Lorenz, S.1
Cantor, A.J.2
Rape, M.3
Kuriyan, J.4
-
51
-
-
84856708226
-
Structural basis for autoinhibition and phosphorylation-dependent activation of c-cbl
-
Dou, H., Buetow, L., Hock, A., Sibbet, G. J., Vousden, K. H., and Huang, D. T. (2012) Structural basis for autoinhibition and phosphorylation-dependent activation of c-Cbl. Nat. Struct. Mol. Biol. 19, 184-192
-
(2012)
Nat. Struct. Mol. Biol
, vol.19
, pp. 184-192
-
-
Dou, H.1
Buetow, L.2
Hock, A.3
Sibbet, G.J.4
Vousden, K.H.5
Huang, D.T.6
-
52
-
-
84881481225
-
Compact parkin only: Insights into the structure of an autoinhibited ubiquitin ligase
-
Byrd, R. A., and Weissman, A. M. (2013) Compact Parkin only: insights into the structure of an autoinhibited ubiquitin ligase. EMBO J. 32, 2087-2089
-
(2013)
EMBO J
, vol.32
, pp. 2087-2089
-
-
Byrd, R.A.1
Weissman, A.M.2
-
53
-
-
84912127688
-
Phosphorylation by pink1 releases the ubl domain and initializes the conformational opening of the e3 ubiquitin ligase parkin
-
Caulfield, T. R., Fiesel, F. C., Moussaud-Lamodiére, E. L., Dourado, D. F., Flores, S. C., and Springer, W. (2014) Phosphorylation by PINK1 releases the UBL domain and initializes the conformational opening of the E3 ubiquitin ligase Parkin. PLoS Comput. Biol. 10, e1003935
-
(2014)
PLoS Comput. Biol
, vol.10
, pp. e1003935
-
-
Caulfield, T.R.1
Fiesel, F.C.2
Moussaud-Lamodiére, E.L.3
Dourado, D.F.4
Flores, S.C.5
Springer, W.6
-
54
-
-
84939795423
-
Mechanism of phospho-ubiquitin-induced parkin activation
-
Wauer, T., Simicek, M., Schubert, A., and Komander, D. (2015) Mechanism of phospho-ubiquitin-induced PARKIN activation. Nature 524, 370-374
-
(2015)
Nature
, vol.524
, pp. 370-374
-
-
Wauer, T.1
Simicek, M.2
Schubert, A.3
Komander, D.4
-
55
-
-
0037249354
-
Conformational flexibility underlies ubiquitin ligation mediated by the wwp1 hect domain e3 ligase
-
Verdecia, M. A., Joazeiro, C. A., Wells, N. J., Ferrer, J. L., Bowman, M. E., Hunter, T., and Noel, J. P. (2003) Conformational flexibility underlies ubiquitin ligation mediated by the WWP1 HECT domain E3 ligase. Mol. Cell 11, 249-259
-
(2003)
Mol. Cell
, vol.11
, pp. 249-259
-
-
Verdecia, M.A.1
Joazeiro, C.A.2
Wells, N.J.3
Ferrer, J.L.4
Bowman, M.E.5
Hunter, T.6
Noel, J.P.7
-
56
-
-
73549086113
-
The mechanism of ubiquitination in the cullin-ring e3 ligase machinery: Conformational control of substrate orientation
-
Liu, J., and Nussinov, R. (2009) The mechanism of ubiquitination in the cullin-RING E3 ligase machinery: conformational control of substrate orientation. PLoS Comput. Biol. 5, e1000527
-
(2009)
PLoS Comput. Biol
, vol.5
, pp. e1000527
-
-
Liu, J.1
Nussinov, R.2
-
57
-
-
81755171430
-
Flexible cullins in cullin-ring e3 ligases allosterically regulate ubiquitination
-
Liu, J., and Nussinov, R. (2011) Flexible cullins in cullin-RING E3 ligases allosterically regulate ubiquitination. J. Biol. Chem. 286, 40934-40942
-
(2011)
J. Biol. Chem
, vol.286
, pp. 40934-40942
-
-
Liu, J.1
Nussinov, R.2
-
58
-
-
77955682724
-
Rbx1 flexible linker facilitates cullin-ring ligase function before neddylation and after deneddylation
-
Liu, J., and Nussinov, R. (2010) Rbx1 flexible linker facilitates cullin-RING ligase function before neddylation and after deneddylation. Biophys. J. 99, 736-744
-
(2010)
Biophys. J
, vol.99
, pp. 736-744
-
-
Liu, J.1
Nussinov, R.2
-
59
-
-
50449108516
-
Structural insights into nedd8 activation of cullin-ring ligases: Conformational control of conjugation
-
Duda, D. M., Borg, L. A., Scott, D. C., Hunt, H. W., Hammel, M., and Schulman, B. A. (2008) Structural insights into NEDD8 activation of cullin-RING ligases: conformational control of conjugation. Cell 134, 995-1006
-
(2008)
Cell
, vol.134
, pp. 995-1006
-
-
Duda, D.M.1
Borg, L.A.2
Scott, D.C.3
Hunt, H.W.4
Hammel, M.5
Schulman, B.A.6
-
60
-
-
9644252804
-
Characterization of segments from the central region of brca1: An intrinsically disordered scaffold for multiple protein-protein and protein-DNA interactions
-
Mark, W. Y., Liao, J. C., Lu, Y., Ayed, A., Laister, R., Szymczyna, B., Chakrabartty, A., and Arrowsmith, C. H. (2005) Characterization of segments from the central region of BRCA1: an intrinsically disordered scaffold for multiple protein-protein and protein-DNA interactions J. Mol. Biol. 345, 275-287
-
(2005)
J. Mol. Biol
, vol.345
, pp. 275-287
-
-
Mark, W.Y.1
Liao, J.C.2
Lu, Y.3
Ayed, A.4
Laister, R.5
Szymczyna, B.6
Chakrabartty, A.7
Arrowsmith, C.H.8
-
61
-
-
84928787209
-
Ring e3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex
-
Brown, N. G., VanderLinden, R., Watson, E. R., Qiao, R., Grace, C. R., Yamaguchi, M., Weissmann, F., Frye, J. J., Dube, P., Ei Cho, S., Actis, M. L., Rodrigues, P., Fujii, N., Peters, J. M., Stark, H., and Schulman, B. A. (2015) RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex. Proc. Natl. Acad. Sci. U.S.A. 112, 5272-5279
-
(2015)
Proc. Natl. Acad. Sci. U.S.A
, vol.112
, pp. 5272-5279
-
-
Brown, N.G.1
VanderLinden, R.2
Watson, E.R.3
Qiao, R.4
Grace, C.R.5
Yamaguchi, M.6
Weissmann, F.7
Frye, J.J.8
Dube, P.9
Ei Cho, S.10
Actis, M.L.11
Rodrigues, P.12
Fujii, N.13
Peters, J.M.14
Stark, H.15
Schulman, B.A.16
-
62
-
-
0034850147
-
A structural basis for processivity
-
Breyer, W. A., and Matthews, B. W. (2001) A structural basis for processivity. Protein Sci. 10, 1699-1711
-
(2001)
Protein Sci
, vol.10
, pp. 1699-1711
-
-
Breyer, W.A.1
Matthews, B.W.2
-
63
-
-
39049187931
-
From loops to chains: Unraveling the mysteries of polyubiquitin chain specificity and processivity
-
Sowa, M. E., and Harper, J. W. (2006) From loops to chains: unraveling the mysteries of polyubiquitin chain specificity and processivity. ACS Chem. Biol. 1, 20-24
-
(2006)
ACS Chem. Biol
, vol.1
, pp. 20-24
-
-
Sowa, M.E.1
Harper, J.W.2
-
64
-
-
30344482590
-
Lingering mysteries of ubiquitin-chain assembly
-
Hochstrasser, M. (2006) Lingering mysteries of ubiquitin-chain assembly. Cell 124, 27-34
-
(2006)
Cell
, vol.124
, pp. 27-34
-
-
Hochstrasser, M.1
-
65
-
-
44949231368
-
Genome-wide and functional annotation of human e3 ubiquitin ligases identifies mulan, a mitochondrial e3 that regulates the organelle's dynamics and signaling
-
Li, W., Bengtson, M. H., Ulbrich, A., Matsuda, A., Reddy, V. A., Orth, A., Chanda, S. K., Batalov, S., and Joazeiro, C. A. (2008) Genome-wide and functional annotation of human E3 ubiquitin ligases identifies MULAN, a mitochondrial E3 that regulates the organelle's dynamics and signaling. PLoS ONE 3, e1487
-
(2008)
PLoS ONE
, vol.3
, pp. e1487
-
-
Li, W.1
Bengtson, M.H.2
Ulbrich, A.3
Matsuda, A.4
Reddy, V.A.5
Orth, A.6
Chanda, S.K.7
Batalov, S.8
Joazeiro, C.A.9
-
66
-
-
0026068805
-
Naming a targeting signal
-
Varshavsky, A. (1991) Naming a targeting signal. Cell 64, 13-15
-
(1991)
Cell
, vol.64
, pp. 13-15
-
-
Varshavsky, A.1
-
67
-
-
84891752434
-
The eukaryotic linear motif resource elm: 10 years and counting
-
Dinkel, H., Van Roey, K., Michael, S., Davey, N. E., Weatheritt, R. J., Born, D., Speck, T., Krüger, D., Grebnev, G., Kuban, M., Strumillo, M., Uyar, B., Budd, A., Altenberg, B., Seiler, M., et al. (2014) The eukaryotic linear motif resource ELM: 10 years and counting. Nucleic Acids Res. 42, D259-D266
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D259-D266
-
-
Dinkel, H.1
Van Roey, K.2
Michael, S.3
Davey, N.E.4
Weatheritt, R.J.5
Born, D.6
Speck, T.7
Krüger, D.8
Grebnev, G.9
Kuban, M.10
Strumillo, M.11
Uyar, B.12
Budd, A.13
Altenberg, B.14
Seiler, M.15
-
68
-
-
0034654399
-
The ken box: An apc recognition signal distinct from the d box targeted by cdh1
-
Pfleger, C. M., and Kirschner, M. W. (2000) The KEN box: an APC recognition signal distinct from the D box targeted by Cdh1. Genes Dev. 14, 655-665
-
(2000)
Genes Dev
, vol.14
, pp. 655-665
-
-
Pfleger, C.M.1
Kirschner, M.W.2
-
69
-
-
33747589184
-
The anaphase promoting complex/cyclosome: A machine designed to destroy
-
Peters, J. M. (2006) The anaphase promoting complex/cyclosome: a machine designed to destroy. Nat. Rev. Mol. Cell Biol. 7, 644-656
-
(2006)
Nat. Rev. Mol. Cell Biol
, vol.7
, pp. 644-656
-
-
Peters, J.M.1
-
70
-
-
13244283007
-
The anaphase-promoting complex: A key factor in the regulation of cell cycle
-
Castro, A., Bernis, C., Vigneron, S., Labbé, J. C., and Lorca, T. (2005) The anaphase-promoting complex: a key factor in the regulation of cell cycle. Oncogene 24, 314-325
-
(2005)
Oncogene
, vol.24
, pp. 314-325
-
-
Castro, A.1
Bernis, C.2
Vigneron, S.3
Labbé, J.C.4
Lorca, T.5
-
71
-
-
84869112362
-
Protein tyrosine kinase regulation by ubiquitination: Critical roles of cbl-family ubiquitin ligases
-
Mohapatra, B., Ahmad, G., Nadeau, S., Zutshi, N., An, W., Scheffe, S., Dong, L., Feng, D., Goetz, B., Arya, P., Bailey, T. A., Palermo, N., Borgstahl, G. E., Natarajan, A., Raja, S. M., et al. (2013) Protein tyrosine kinase regulation by ubiquitination: critical roles of Cbl-family ubiquitin ligases. Biochim. Biophys. Acta 1833, 122-139
-
(2013)
Biochim. Biophys. Acta 1833
, pp. 122-139
-
-
Mohapatra, B.1
Ahmad, G.2
Nadeau, S.3
Zutshi, N.4
An, W.5
Scheffe, S.6
Dong, L.7
Feng, D.8
Goetz, B.9
Arya, P.10
Bailey, T.A.11
Palermo, N.12
Borgstahl, G.E.13
Natarajan, A.14
Raja, S.M.15
-
72
-
-
40949140084
-
Structural basis for a novel intrapeptidyl h-bond and reverse binding of c-cbl-tkb domain substrates
-
Ng, C., Jackson, R. A., Buschdorf, J. P., Sun, Q., Guy, G. R., and Sivaraman, J. (2008) Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates. EMBO J. 27, 804-816
-
(2008)
EMBO J
, vol.27
, pp. 804-816
-
-
Ng, C.1
Jackson, R.A.2
Buschdorf, J.P.3
Sun, Q.4
Guy, G.R.5
Sivaraman, J.6
-
73
-
-
84878260314
-
Mechanisms and function of substrate recruitment by f-box proteins
-
Skaar, J. R., Pagan, J. K., and Pagano, M. (2013) Mechanisms and function of substrate recruitment by F-box proteins. Nat. Rev. Mol. Cell Biol. 14, 369-381
-
(2013)
Nat. Rev. Mol. Cell Biol
, vol.14
, pp. 369-381
-
-
Skaar, J.R.1
Pagan, J.K.2
Pagano, M.3
-
74
-
-
84860496378
-
The fbw7 and-trcp e3 ubiquitin ligases and their roles in tumorigenesis
-
Lau, A. W., Fukushima, H., and Wei, W. (2012) The Fbw7 and-TRCP E3 ubiquitin ligases and their roles in tumorigenesis. Front. Biosci. (Landmark Ed.) 17, 2197-2212
-
(2012)
Front. Biosci. (Landmark Ed
, vol.17
, pp. 2197-2212
-
-
Lau, A.W.1
Fukushima, H.2
Wei, W.3
-
75
-
-
44349122993
-
Deregulated proteolysis by the f-box proteins skp2 and-trcp: Tipping the scales of cancer
-
Frescas, D., and Pagano, M. (2008) Deregulated proteolysis by the F-box proteins SKP2 and-TrCP: tipping the scales of cancer. Nat. Rev. Cancer 8, 438-449
-
(2008)
Nat. Rev. Cancer
, vol.8
, pp. 438-449
-
-
Frescas, D.1
Pagano, M.2
-
76
-
-
84906854634
-
The structural and functional signatures of proteins that undergo multiple events of post-translational modification
-
Pejaver, V., Hsu, W. L., Xin, F., Dunker, A. K., Uversky, V. N., and Radivojac, P. (2014) The structural and functional signatures of proteins that undergo multiple events of post-translational modification. Protein Sci. 23, 1077-1093
-
(2014)
Protein Sci
, vol.23
, pp. 1077-1093
-
-
Pejaver, V.1
Hsu, W.L.2
Xin, F.3
Dunker, A.K.4
Uversky, V.N.5
Radivojac, P.6
-
77
-
-
0141591688
-
Multisite phosphorylation by cdk2 and gsk3 controls cyclin e degradation
-
Welcker, M., Singer, J., Loeb, K. R., Grim, J., Bloecher, A., Gurien-West, M., Clurman, B. E., and Roberts, J. M. (2003) Multisite phosphorylation by Cdk2 and GSK3 controls cyclin E degradation. Mol. Cell 12, 381-392
-
(2003)
Mol.Cell
, vol.12
, pp. 381-392
-
-
Welcker, M.1
Singer, J.2
Loeb, K.R.3
Grim, J.4
Bloecher, A.5
Gurien-West, M.6
Clurman, B.E.7
Roberts, J.M.8
-
78
-
-
22244476115
-
The v-jun point mutation allows c-jun to escape gsk3-dependent recognition and destruction by the fbw7 ubiquitin ligase
-
Wei, W., Jin, J., Schlisio, S., Harper, J. W., and Kaelin, W. G., Jr. (2005) The v-Jun point mutation allows c-Jun to escape GSK3-dependent recognition and destruction by the Fbw7 ubiquitin ligase. Cancer Cell 8, 25-33
-
(2005)
Cancer Cell
, vol.8
, pp. 25-33
-
-
Wei, W.1
Jin, J.2
Schlisio, S.3
Harper, J.W.4
Kaelin, W.G.5
-
79
-
-
0037155691
-
Control of-catenin phosphorylation/degradation by a dual-kinase mechanism
-
Liu, C., Li, Y., Semenov, M., Han, C., Baeg, G. H., Tan, Y., Zhang, Z., Lin, X., and He, X. (2002) Control of-catenin phosphorylation/degradation by a dual-kinase mechanism. Cell 108, 837-847
-
(2002)
Cell
, vol.108
, pp. 837-847
-
-
Liu, C.1
Li, Y.2
Semenov, M.3
Han, C.4
Baeg, G.H.5
Tan, Y.6
Zhang, Z.7
Lin, X.8
He, X.9
-
80
-
-
73549095761
-
A coordinated phosphorylation by lats and ck1 regulates yap stability through scf-trcp
-
Zhao, B., Li, L., Tumaneng, K., Wang, C. Y., and Guan, K. L. (2010) A coordinated phosphorylation by Lats and CK1 regulates YAP stability through SCF-TRCP. Genes Dev. 24, 72-85
-
(2010)
Genes Dev
, vol.24
, pp. 72-85
-
-
Zhao, B.1
Li, L.2
Tumaneng, K.3
Wang, C.Y.4
Guan, K.L.5
-
81
-
-
84905718910
-
Phosphorylation of an intrinsically disordered segment in ets1 shifts conformational sampling toward bindingcompetent substates
-
Bui, J. M., and Gsponer, J. (2014) Phosphorylation of an intrinsically disordered segment in Ets1 shifts conformational sampling toward bindingcompetent substates. Structure 22, 1196-1203
-
(2014)
Structure
, vol.22
, pp. 1196-1203
-
-
Bui, J.M.1
Gsponer, J.2
-
82
-
-
82555205273
-
Cascades of multisite phosphorylation control sic1 destruction at the onset of s phase
-
Kõivomägi, M., Valk, E., Venta, R., Iofik, A., Lepiku, M., Balog, E. R., Rubin, S. M., Morgan, D. O., and Loog, M. (2011) Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase. Nature 480, 128-131
-
(2011)
Nature
, vol.480
, pp. 128-131
-
-
Kõivomägi, M.1
Valk, E.2
Venta, R.3
Iofik, A.4
Lepiku, M.5
Balog, E.R.6
Rubin, S.M.7
Morgan, D.O.8
Loog, M.9
-
83
-
-
75849129292
-
Multiple ser/thr-rich degrons mediate the degradation of ci/gli by the cul3-hib/spop e3 ubiquitin ligase
-
Zhang, Q., Shi, Q., Chen, Y., Yue, T., Li, S., Wang, B., and Jiang, J. (2009) Multiple Ser/Thr-rich degrons mediate the degradation of Ci/Gli by the Cul3-HIB/SPOP E3 ubiquitin ligase. Proc. Natl. Acad. Sci. U.S.A. 106, 21191-21196
-
(2009)
Proc. Natl. Acad. Sci. U.S.A
, vol.106
, pp. 21191-21196
-
-
Zhang, Q.1
Shi, Q.2
Chen, Y.3
Yue, T.4
Li, S.5
Wang, B.6
Jiang, J.7
-
84
-
-
84898734084
-
Lysine-targeting specificity in ubiquitin and ubiquitin-like modification pathways
-
Mattiroli, F., and Sixma, T. K. (2014) Lysine-targeting specificity in ubiquitin and ubiquitin-like modification pathways. Nat. Struct. Mol. Biol. 21, 308-316
-
(2014)
Nat. Struct. Mol. Biol
, vol.21
, pp. 308-316
-
-
Mattiroli, F.1
Sixma, T.K.2
-
85
-
-
81855227619
-
The molecular basis of crl4ddb2/csa ubiquitin ligase architecture, targeting, and activation
-
Fischer, E. S., Scrima, A., Böhm, K., Matsumoto, S., Lingaraju, G. M., Faty, M., Yasuda, T., Cavadini, S., Wakasugi, M., Hanaoka, F., Iwai, S., Gut, H., Sugasawa, K., and Thomä, N. H. (2011) The molecular basis of CRL4DDB2/CSA ubiquitin ligase architecture, targeting, and activation. Cell 147, 1024-1039
-
(2011)
Cell
, vol.147
, pp. 1024-1039
-
-
Fischer, E.S.1
Scrima, A.2
Böhm, K.3
Matsumoto, S.4
Lingaraju, G.M.5
Faty, M.6
Yasuda, T.7
Cavadini, S.8
Wakasugi, M.9
Hanaoka, F.10
Iwai, S.11
Gut, H.12
Sugasawa, K.13
Thomä, N.H.14
-
86
-
-
34250017680
-
Suprafacial orientation of the scfcdc4 dimer accommodates multiple geometries for substrate ubiquitination
-
Tang, X., Orlicky, S., Lin, Z., Willems, A., Neculai, D., Ceccarelli, D., Mercurio, F., Shilton, B. H., Sicheri, F., and Tyers, M. (2007) Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination. Cell 129, 1165-1176
-
(2007)
Cell
, vol.129
, pp. 1165-1176
-
-
Tang, X.1
Orlicky, S.2
Lin, Z.3
Willems, A.4
Neculai, D.5
Ceccarelli, D.6
Mercurio, F.7
Shilton, B.H.8
Sicheri, F.9
Tyers, M.10
-
87
-
-
84885588582
-
Ubiquitination site preferences in anaphase promoting complex/cyclosome (apc/c) substrates
-
Min, M., Mayor, U., and Lindon, C. (2013) Ubiquitination site preferences in anaphase promoting complex/cyclosome (APC/C) substrates. Open Biol. 3, 130097
-
(2013)
Open Biol
, vol.3
, pp. 130097
-
-
Min, M.1
Mayor, U.2
Lindon, C.3
-
88
-
-
80052349174
-
Intrinsic disorder in ubiquitination substrates
-
Hagai, T., Azia, A., Tóth-Petróczy, A., and Levy, Y. (2011) Intrinsic disorder in ubiquitination substrates. J. Mol. Biol. 412, 319-324
-
(2011)
J. Mol. Biol
, vol.412
, pp. 319-324
-
-
Hagai, T.1
Azia, A.2
Tóth-Petróczy, A.3
Levy, Y.4
-
89
-
-
84927535922
-
Substrate degradation by the proteasome: A single-molecule kinetic analysis
-
Lu, Y., Lee, B. H., King, R. W., Finley, D., and Kirschner, M. W. (2015) Substrate degradation by the proteasome: a single-molecule kinetic analysis. Science 348, 1250834
-
(2015)
Science
, vol.348
, pp. 1250834
-
-
Lu, Y.1
Lee, B.H.2
King, R.W.3
Finley, D.4
Kirschner, M.W.5
-
90
-
-
4344559454
-
An unstructured initiation site is required for efficient proteasomemediated degradation
-
Prakash, S., Tian, L., Ratliff, K. S., Lehotzky, R. E., and Matouschek, A. (2004) An unstructured initiation site is required for efficient proteasomemediated degradation. Nat. Struct. Mol. Biol. 11, 830-837
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 830-837
-
-
Prakash, S.1
Tian, L.2
Ratliff, K.S.3
Lehotzky, R.E.4
Matouschek, A.5
-
91
-
-
79951850741
-
Defining the geometry of the two-component proteasome degron
-
Inobe, T., Fishbain, S., Prakash, S., and Matouschek, A. (2011) Defining the geometry of the two-component proteasome degron. Nat. Chem. Biol. 7, 161-167
-
(2011)
Nat. Chem. Biol
, vol.7
, pp. 161-167
-
-
Inobe, T.1
Fishbain, S.2
Prakash, S.3
Matouschek, A.4
-
92
-
-
84878270699
-
Rad23 escapes degradation because it lacks a proteasome initiation region
-
Fishbain, S., Prakash, S., Herrig, A., Elsasser, S., and Matouschek, A. (2011) Rad23 escapes degradation because it lacks a proteasome initiation region. Nat. Commun. 2, 192
-
(2011)
Nat. Commun
, vol.2
, pp. 192
-
-
Fishbain, S.1
Prakash, S.2
Herrig, A.3
Elsasser, S.4
Matouschek, A.5
-
93
-
-
77951199144
-
Degradation of some polyubiquitinated proteins requires an intrinsic proteasomal binding element in the substrates
-
Zhao, M., Zhang, N. Y., Zurawel, A., Hansen, K. C., and Liu, C. W. (2010) Degradation of some polyubiquitinated proteins requires an intrinsic proteasomal binding element in the substrates. J. Biol. Chem. 285, 4771-4780
-
(2010)
J. Biol. Chem
, vol.285
, pp. 4771-4780
-
-
Zhao, M.1
Zhang, N.Y.2
Zurawel, A.3
Hansen, K.C.4
Liu, C.W.5
-
94
-
-
84907406045
-
Intrinsically disordered segments affect protein half-life in the cell and during evolution
-
van der Lee, R., Lang, B., Kruse, K., Gsponer, J., Sánchez de Groot, N., Huynen, M. A., Matouschek, A., Fuxreiter, M., and Babu, M. M. (2014) Intrinsically disordered segments affect protein half-life in the cell and during evolution. Cell Rep. 8, 1832-1844
-
(2014)
Cell Rep
, Issue.8
, pp. 1832-1844
-
-
Van Der Lee, R.1
Lang, B.2
Kruse, K.3
Gsponer, J.4
Sánchez De Groot, N.5
Huynen, M.A.6
Matouschek, A.7
Fuxreiter, M.8
Babu, M.M.9
-
95
-
-
56249108370
-
Ubiquitin-independent degradation of proteins by the proteasome
-
Jariel-Encontre, I., Bossis, G., and Piechaczyk, M. (2008) Ubiquitin-independent degradation of proteins by the proteasome. Biochim. Biophys. Acta 1786, 153-177
-
(2008)
Biochim. Biophys. Acta
, vol.1786
, pp. 153-177
-
-
Jariel-Encontre, I.1
Bossis, G.2
Piechaczyk, M.3
-
96
-
-
84890174353
-
Ubiquitin-independent proteasomal degradation
-
Erales, J., and Coffino, P. (2014) Ubiquitin-independent proteasomal degradation. Biochim. Biophys. Acta 1843, 216-221
-
(2014)
Biochim. Biophys. Acta
, vol.1843
, pp. 216-221
-
-
Erales, J.1
Coffino, P.2
-
97
-
-
24044538903
-
Iupred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
-
Dosztányi, Z., Csizmok, V., Tompa, P., and Simon, I. (2005) IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics 21, 3433-3434
-
(2005)
Bioinformatics
, vol.21
, pp. 3433-3434
-
-
Dosztányi, Z.1
Csizmok, V.2
Tompa, P.3
Simon, I.4
-
98
-
-
84891782659
-
Pfam: The protein families database
-
Finn, R. D., Bateman, A., Clements, J., Coggill, P., Eberhardt, R. Y., Eddy, S. R., Heger, A., Hetherington, K., Holm, L., Mistry, J., Sonnhammer, E. L., Tate, J., and Punta, M. (2014) Pfam: the protein families database. Nucleic Acids Res. 42, D222-D230
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D222-D230
-
-
Finn, R.D.1
Bateman, A.2
Clements, J.3
Coggill, P.4
Eberhardt, R.Y.5
Eddy, S.R.6
Heger, A.7
Hetherington, K.8
Holm, L.9
Mistry, J.10
Sonnhammer, E.L.11
Tate, J.12
Punta, M.13
-
99
-
-
84883591545
-
Scalable web services for the psipred protein analysis workbench
-
Buchan, D. W., Minneci, F., Nugent, T. C., Bryson, K., and Jones, D. T. (2013) Scalable web services for the PSIPRED Protein Analysis Workbench. Nucleic Acids Res. 41, W349-W357
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W349-W357
-
-
Buchan, D.W.1
Minneci, F.2
Nugent, T.C.3
Bryson, K.4
Jones, D.T.5
|