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Volumn 64, Issue 3, 2015, Pages 193-202

CRISPR-Cas systems in prokaryotes

Author keywords

CRISPR Cas; Prokaryotes

Indexed keywords

CELLULAR APOPTOSIS SUSCEPTIBILITY PROTEIN; DNA A; GUIDE RNA; NUCLEIC ACID; PATTERN RECOGNITION RECEPTOR; PLASMID DNA; RIBONUCLEOPROTEIN; TOLL LIKE RECEPTOR 2; BACTERIAL PROTEIN;

EID: 84942245251     PISSN: 17331331     EISSN: 25444646     Source Type: Journal    
DOI: 10.5604/01.3001.0009.2114     Document Type: Article
Times cited : (15)

References (108)
  • 6
    • 81255160844 scopus 로고    scopus 로고
    • Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference
    • Beloglazova N., P. Petit, R. Flick, G. Brown, A. Savchenko and A.F. Yakunin. 2011. Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference. EMBO J. 30: 4616-4627.
    • (2011) EMBO J , vol.30 , pp. 4616-4627
    • Beloglazova, N.1    Petit, P.2    Flick, R.3    Brown, G.4    Savchenko, A.5    Yakunin, A.F.6
  • 7
    • 0037510038 scopus 로고    scopus 로고
    • Enhancing gene targeting with designed zinc finger nucleases
    • Bibikova M., K. Beumer, J.K. Trautman and D. Carroll. 2003. Enhancing gene targeting with designed zinc finger nucleases. Science 300: 764.
    • (2003) Science , vol.300 , pp. 764
    • Bibikova, M.1    Beumer, K.2    Trautman, J.K.3    Carroll, D.4
  • 8
    • 84882986957 scopus 로고    scopus 로고
    • Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system
    • Bikard D., W. Jiang, P. Samai, A. Hochschild, F. Zhang and L.A. Marraffini. 2013. Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system. Nucleic Acids Res. 41: 7429-7437.
    • (2013) Nucleic Acids Res. , vol.41 , pp. 7429-7437
    • Bikard, D.1    Jiang, W.2    Samai, P.3    Hochschild, A.4    Zhang, F.5    Marraffini, L.A.6
  • 10
    • 23844505202 scopus 로고    scopus 로고
    • Clustered regularly interspaced short palindrome repeats (CRIS- PRs) have spacers of extrachromosomal origin
    • Bolotin A., B. Quinquis, A. Sorokin and S.D. Ehrlich. 2005. Clustered regularly interspaced short palindrome repeats (CRIS- PRs) have spacers of extrachromosomal origin. Microbiology 151: 2551-2561.
    • (2005) Microbiology , vol.151 , pp. 2551-2561
    • Bolotin, A.1    Quinquis, B.2    Sorokin, A.3    Ehrlich, S.D.4
  • 11
    • 84872607723 scopus 로고    scopus 로고
    • Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system
    • Bondy-Denomy J., A. Pawluk, K.L. Maxwell and A.R. Davidson. 2013. Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system. Nature 493: 429-432.
    • (2013) Nature , vol.493 , pp. 429-432
    • Bondy-Denomy, J.1    Pawluk, A.2    Maxwell, K.L.3    Davidson, A.R.4
  • 12
    • 58049191229 scopus 로고    scopus 로고
    • Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes
    • Carte J., R. Wang, H.Li, R.M. Terns and M.P. Terns M.P. 2008. Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes. Genes Dev. 22: 3489-3496.
    • (2008) Genes Dev. , vol.22 , pp. 3489-3496
    • Carte, J.1    Wang, R.2    Li, H.3    Terns, R.M.4    Terns, M.P.M.P.5
  • 16
    • 84864864464 scopus 로고    scopus 로고
    • Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system
    • Datsenko K.A., K. Pougach, A. Tikhonov, B.L. Wanner, K. Severinov and E. Semenova. 2012. Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system. Nat. Commun. 3: 945.
    • (2012) Nat. Commun. , vol.3 , pp. 945
    • Datsenko, K.A.1    Pougach, K.2    Tikhonov, A.3    Wanner, B.L.4    Severinov, K.5    Semenova, E.6
  • 18
    • 84874195392 scopus 로고    scopus 로고
    • A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus
    • Deng L., R.A. Garrett, S.A. Shah, X. Peng and Q. She. 2013. A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus. Mol. Microbiol. 87: 1088-1099.
    • (2013) Mol. Microbiol. , vol.87 , pp. 1088-1099
    • Deng, L.1    Garrett, R.A.2    Shah, S.A.3    Peng, X.4    She, Q.5
  • 20
    • 84879032247 scopus 로고    scopus 로고
    • CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coli
    • Díez-Villaseñor C., N.M. Guzmán, C. Almendros, J. García-Martínez and F.J. Mojica F.J. 2013. CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coli. RNA Biol. 10: 792-802.
    • (2013) RNA Biol. , vol.10 , pp. 792-802
    • Díez-Villaseñor, C.1    Guzmán, N.M.2    Almendros, C.3    García-Martínez, J.4    Mojica, F.J.F.J.5
  • 21
    • 84880125937 scopus 로고    scopus 로고
    • CRISPR-Cas and restriction-modification systems are compatible and increase phage resistance
    • Dupuis M., M. Villion, A.H. Magadán and S. Moineau. 2013. CRISPR-Cas and restriction-modification systems are compatible and increase phage resistance. Nat. Commun. 4: 2087.
    • (2013) Nat. Commun. , vol.4 , pp. 2087
    • Dupuis, M.1    Villion, M.2    Magadán, A.H.3    Moineau, S.4
  • 24
    • 84866859751 scopus 로고    scopus 로고
    • Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
    • Gasiunas G., R. Barrangou, P. Horvath and V. Siksnys. 2012. Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc. Natl. Acad. Sci. USA 109: E2579-2586.
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. E2579-E2586
    • Gasiunas, G.1    Barrangou, R.2    Horvath, P.3    Siksnys, V.4
  • 25
    • 84892804564 scopus 로고    scopus 로고
    • Molecular mechanisms of CRISPR-mediated microbial immunity
    • Gasiunas G., T. Sinkunas and V. Siksnys. 2014. Molecular mechanisms of CRISPR-mediated microbial immunity. Cell Mol. Life Sci. 71: 449-465.
    • (2014) Cell Mol. Life Sci. , vol.71 , pp. 449-465
    • Gasiunas, G.1    Sinkunas, T.2    Siksnys, V.3
  • 26
    • 33744941078 scopus 로고    scopus 로고
    • The repetitive DNA elements called CRISPRs and their associated genes: Evidence of horizontal transfer among prokaryotes
    • Godde J.S. and A. Bickerton. 2006. The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes. J. Mol. Evol. 62: 718-729.
    • (2006) J. Mol. Evol. , vol.62 , pp. 718-729
    • Godde, J.S.1    Bickerton, A.2
  • 27
    • 84862190119 scopus 로고    scopus 로고
    • The bacterial CRISPR/Cas system as analog of the mammalian adaptive immune system
    • Goren M., I. Yosef, R. Edgar and U. Qimron. 2012. The bacterial CRISPR/Cas system as analog of the mammalian adaptive immune system. RNA Biol. 9: 549-554.
    • (2012) RNA Biol. , vol.9 , pp. 549-554
    • Goren, M.1    Yosef, I.2    Edgar, R.3    Qimron, U.4
  • 28
    • 0027724480 scopus 로고
    • Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; Application for strain differentiation by a novel typing method
    • Groenen P.M., A.E. Bunschoten, D. van Soolingen and J.D. van Embden. 1993. Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method. Mol. Microbiol. 10: 1057-1065.
    • (1993) Mol. Microbiol. , vol.10 , pp. 1057-1065
    • Groenen, P.M.1    Bunschoten, A.E.2    Van Soolingen, D.3    Van Embden, J.D.4
  • 29
    • 84880074536 scopus 로고    scopus 로고
    • The CRISPR-associated gene cas2 of Legionella pneumophila is required for intracellular infection of amoebae
    • Gunderson F.F. and N.P. Cianciotto. 2013. The CRISPR-associated gene cas2 of Legionella pneumophila is required for intracellular infection of amoebae. MBio. 4: e00074-00013.
    • (2013) MBio , vol.4 , pp. e00074-e00013
    • Gunderson, F.F.1    Cianciotto, N.P.2
  • 30
    • 34248400310 scopus 로고    scopus 로고
    • A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes
    • Haft D.H., J. Selengut, E.F. Mongodin and K.E. Nelson. 2005. A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes. PLoS Comput Biol 1: e60.
    • (2005) PLoS Comput Biol , vol.1 , pp. e60
    • Haft, D.H.1    Selengut, J.2    Mongodin, E.F.3    Nelson, K.E.4
  • 33
    • 84855475577 scopus 로고    scopus 로고
    • Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site
    • Hatoum-Aslan A., I. Maniv and L.A. Marraffini. 2011. Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site. Proc. Natl. Acad. Sci. USA 108: 21218-21222.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 21218-21222
    • Hatoum-Aslan, A.1    Maniv, I.2    Marraffini, L.A.3
  • 34
    • 84890935599 scopus 로고    scopus 로고
    • Genetic characterization of antiplasmid immunity through a type III-A CRISPR-Cas system
    • Hatoum-Aslan A., I. Maniv, P. Samai and L.A. Marraffini. 2014. Genetic characterization of antiplasmid immunity through a type III-A CRISPR-Cas system. J. Bacteriol. 196: 310-317.
    • (2014) J. Bacteriol. , vol.196 , pp. 310-317
    • Hatoum-Aslan, A.1    Maniv, I.2    Samai, P.3    Marraffini, L.A.4
  • 35
    • 84886422518 scopus 로고    scopus 로고
    • Reassortment of CRISPR repeat-spacer loci in Sulfolobus islandicus
    • Held N.L., A. Herrera and R.J. Whitaker. 2013. Reassortment of CRISPR repeat-spacer loci in Sulfolobus islandicus. Environ. Microbiol. 15: 3065-3076.
    • (2013) Environ. Microbiol. , vol.15 , pp. 3065-3076
    • Held, N.L.1    Herrera, A.2    Whitaker, R.J.3
  • 36
    • 84903471734 scopus 로고    scopus 로고
    • Adapting to new threats: The generation of memory by CRISPR-Cas immune systems
    • Heler R., L.A. Marraffini and D. Bikard. 2014. Adapting to new threats: the generation of memory by CRISPR-Cas immune systems. Mol. Microbiol. 93: 1-9.
    • (2014) Mol. Microbiol. , vol.93 , pp. 1-9
    • Heler, R.1    Marraffini, L.A.2    Bikard, D.3
  • 38
    • 84920797201 scopus 로고    scopus 로고
    • Structural analyses of the CRISPR protein Csc2 reveal the RNA-binding interface of the type I-D Cas7 family
    • Hrle A., L.K. Maier, K. Sharma, J. Ebert, C. Basquin, H. Urlaub, A. Marchfelder and E. Conti. 2014. Structural analyses of the CRISPR protein Csc2 reveal the RNA-binding interface of the type I-D Cas7 family. RNA Biol. 11(8): 1072-1082.
    • (2014) RNA Biol. , vol.11 , Issue.8 , pp. 1072-1082
    • Hrle, A.1    Maier, L.K.2    Sharma, K.3    Ebert, J.4    Basquin, C.5    Urlaub, H.6    Marchfelder, A.7    Conti, E.8
  • 39
    • 0023600057 scopus 로고
    • Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product
    • Ishino Y., H. Shinagawa, K. Makino, M. Amemura and A. Nakata. 1987. Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product. J. Bacteriol. 169: 5429-5433.
    • (1987) J. Bacteriol. , vol.169 , pp. 5429-5433
    • Ishino, Y.1    Shinagawa, H.2    Makino, K.3    Amemura, M.4    Nakata, A.5
  • 41
    • 0036267740 scopus 로고    scopus 로고
    • Identification of genes that are associated with DNA repeats in prokaryotes
    • Jansen R., J.D. Embden, W. Gaastra and L.M. Schouls. 2002. Identification of genes that are associated with DNA repeats in prokaryotes. Mol. Microbiol. 43: 1565-1575.
    • (2002) Mol. Microbiol. , vol.43 , pp. 1565-1575
    • Jansen, R.1    Embden, J.D.2    Gaastra, W.3    Schouls, L.M.4
  • 42
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang W., D.Bikard, D. Cox, F. Zhang and L.A. Marraffini. 2013. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat. Biotechnol. 31: 233-239.
    • (2013) Nat. Biotechnol , vol.31 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3    Zhang, F.4    Marraffini, L.A.5
  • 43
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek M., K. Chylinski, I. Fonfara, M. Hauer, J.A. Doudna and E. Charpentier. 2012. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337: 816-821.
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 48
    • 77649218943 scopus 로고    scopus 로고
    • Is evolution Darwinian or/and Lamarckian?
    • Koonin E.V. and Y.I. Wolf. 2009. Is evolution Darwinian or/and Lamarckian? Biol. Direct. 4: 42.
    • (2009) Biol. Direct , vol.4 , pp. 42
    • Koonin, E.V.1    Wolf, Y.I.2
  • 49
    • 35748974534 scopus 로고    scopus 로고
    • Evolutionary conservation of sequence and secondary structures in CRISPR repeats
    • Kunin V., R.Sorek and P. Hugenholtz. 2007. Evolutionary conservation of sequence and secondary structures in CRISPR repeats. Genome Biol. 8: R61.
    • (2007) Genome Biol. , vol.8 , pp. R61
    • Kunin, V.1    Sorek, R.2    Hugenholtz, P.3
  • 50
    • 84893693085 scopus 로고    scopus 로고
    • Planting the seed: Target recognition of short guide RNAs
    • Künne T., D.C. Swarts and S.J. Brouns. 2014. Planting the seed: target recognition of short guide RNAs. Trends Microbiol. 22: 74-83.
    • (2014) Trends Microbiol. , vol.22 , pp. 74-83
    • Künne, T.1    Swarts, D.C.2    Brouns, S.J.3
  • 51
    • 84895823059 scopus 로고    scopus 로고
    • Adaptation of the Haloarcula hispanica CRISPR-Cas system to a purified virus strictly requires a priming process
    • Li M., R. Wang, D. Zhao and H. Xiang. 2014. Adaptation of the Haloarcula hispanica CRISPR-Cas system to a purified virus strictly requires a priming process. Nucleic Acids Res. 42: 2483-2492.
    • (2014) Nucleic Acids Res. , vol.42 , pp. 2483-2492
    • Li, M.1    Wang, R.2    Zhao, D.3    Xiang, H.4
  • 54
    • 0037079680 scopus 로고    scopus 로고
    • A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis
    • Makarova K.S., L. Aravind, N.V. Grishin, I.B. Rogozin and E.V. Koonin. 2002. A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis. Nucleic. Acids. Res. 30: 482-496.
    • (2002) Nucleic. Acids. Res. , vol.30 , pp. 482-496
    • Makarova, K.S.1    Aravind, L.2    Grishin, N.V.3    Rogozin, I.B.4    Koonin, E.V.5
  • 55
    • 34248374277 scopus 로고    scopus 로고
    • A putative RNA-interference-based immune system in prokaryotes: Computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
    • Makarova K.S.,N.V. Grishin, S.A. Shabalina, Y.I. Wolf and E.V. Koonin. 2006. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct. 1: 7.
    • (2006) Biol. Direct , vol.1 , pp. 7
    • Makarova, K.S.1    Grishin, N.V.2    Shabalina, S.A.3    Wolf, Y.I.4    Koonin, E.V.5
  • 57
    • 84884856342 scopus 로고    scopus 로고
    • Cas9 as a versatile tool for engineering biology
    • Mali P., K.M. Esvelt and G.M. Church. 2013a. Cas9 as a versatile tool for engineering biology. Nat. Methods 10: 957-963.
    • (2013) Nat. Methods , vol.10 , pp. 957-963
    • Mali, P.1    Esvelt, K.M.2    Church, G.M.3
  • 59
    • 57849137502 scopus 로고    scopus 로고
    • CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA
    • Marraffini L.A. and E.J. Sontheimer. 2008. CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA. Science 322: 1843-1845.
    • (2008) Science , vol.322 , pp. 1843-1845
    • Marraffini, L.A.1    Sontheimer, E.J.2
  • 60
    • 75749118174 scopus 로고    scopus 로고
    • Self versus non-self discrimination during CRISPR RNA-directed immunity
    • Marraffini L.A. and E.J. Sontheimer. 2010. Self versus non-self discrimination during CRISPR RNA-directed immunity. Nature 463: 568-571.
    • (2010) Nature , vol.463 , pp. 568-571
    • Marraffini, L.A.1    Sontheimer, E.J.2
  • 61
    • 0029166294 scopus 로고
    • Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning
    • Mojica F.J., C. Ferrer, G. Juez and F. Rodríguez-Valera. 1995. Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning. Mol. Microbiol. 17: 85-93.
    • (1995) Mol. Microbiol. , vol.17 , pp. 85-93
    • Mojica, F.J.1    Ferrer, C.2    Juez, G.3    Rodríguez-Valera, F.4
  • 62
    • 16444385662 scopus 로고    scopus 로고
    • Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
    • Mojica F.J., C. Díez-Villaseñor, J. García-Martínez and E. Soria E. 2005. Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J. Mol. Evol. 60: 174-182.
    • (2005) J. Mol. Evol. , vol.60 , pp. 174-182
    • Mojica, F.J.1    Díez-Villaseñor, C.2    García-Martínez, J.3    Soria, E.E.4
  • 63
    • 64049118040 scopus 로고    scopus 로고
    • Short motif sequences determine the targets of the prokaryotic CRISPR defence system
    • Mojica F.J., C. Díez-Villaseñor, J. García-Martínez and C. Almendros. 2009. Short motif sequences determine the targets of the prokaryotic CRISPR defence system. Microbiology 155: 733-740.
    • (2009) Microbiology , vol.155 , pp. 733-740
    • Mojica, F.J.1    Díez-Villaseñor, C.2    García-Martínez, J.3    Almendros, C.4
  • 64
    • 80052400382 scopus 로고    scopus 로고
    • Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3)
    • Mulepati S. and S. Bailey. 2011. Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3). J. Biol. Chem. 286: 31896-31903.
    • (2011) J. Biol. Chem. , vol.286 , pp. 31896-31903
    • Mulepati, S.1    Bailey, S.2
  • 65
    • 84867818484 scopus 로고    scopus 로고
    • Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein
    • Nam K.H., F. Ding, C. Haitjema, Q. Huang, M.P. DeLisa and A. Ke. 2012a. Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein. J. Biol. Chem. 287: 35943-35952.
    • (2012) J. Biol. Chem. , vol.287 , pp. 35943-35952
    • Nam, K.H.1    Ding, F.2    Haitjema, C.3    Huang, Q.4    DeLisa, M.P.5    Ke, A.6
  • 66
    • 84865704094 scopus 로고    scopus 로고
    • Cas5d protein processes pre-crRNA and assembles into a cascade-like interference complex in subtype I-C/Dvulg CRISPR-Cas system
    • Nam K.H., C. Haitjema, X. Liu, F. Ding, H. Wang, M.P. DeLisa and A. Ke. 2012b. Cas5d protein processes pre-crRNA and assembles into a cascade-like interference complex in subtype I-C/Dvulg CRISPR-Cas system. Structure 20: 1574-1584.
    • (2012) Structure , vol.20 , pp. 1574-1584
    • Nam, K.H.1    Haitjema, C.2    Liu, X.3    Ding, F.4    Wang, H.5    DeLisa, M.P.6    Ke, A.7
  • 67
    • 84893230222 scopus 로고    scopus 로고
    • Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases
    • Niewoehner O., M. Jinek and J.A. Doudna. 2014. Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases. Nucleic Acids Res. 42: 1341-1353.
    • (2014) Nucleic Acids Res. , vol.42 , pp. 1341-1353
    • Niewoehner, O.1    Jinek, M.2    Doudna, J.A.3
  • 71
    • 15844390228 scopus 로고    scopus 로고
    • CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bac teriophage DNA, and provide additional tools for evolutionary studies
    • Pourcel C.,G. Salvignol and G. Vergnaud. 2005. CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bac teriophage DNA, and provide additional tools for evolutionary studies. Microbiology 151: 653-663.
    • (2005) Microbiology , vol.151 , pp. 653-663
    • Pourcel, C.1    Salvignol, G.2    Vergnaud, G.3
  • 72
    • 84879584456 scopus 로고    scopus 로고
    • CRISPR interference: A structural perspective
    • Reeks J., J. Naismith and M.F. White. 2013. CRISPR interference: a structural perspective. Biochem. J. 453: 155-166.
    • (2013) Biochem. J , vol.453 , pp. 155-166
    • Reeks, J.1    Naismith, J.2    White, M.F.3
  • 74
    • 84877782955 scopus 로고    scopus 로고
    • A CRISPR/Cas system mediates bacterial innate immune evasion and virulence
    • Sampson T.R., S.D. Saroj, A.C. Llewellyn, Y.L. Tzeng and D.S. Weiss. 2013. A CRISPR/Cas system mediates bacterial innate immune evasion and virulence. Nature 497: 254-257.
    • (2013) Nature , vol.497 , pp. 254-257
    • Sampson, T.R.1    Saroj, S.D.2    Llewellyn, A.C.3    Tzeng, Y.L.4    Weiss, D.S.5
  • 76
    • 84861990812 scopus 로고    scopus 로고
    • Mechanism of foreign DNA selection in a bacterial adaptive immune system
    • Sashital D.G., B. Wiedenheft and J.A. Doudna. 2012. Mechanism of foreign DNA selection in a bacterial adaptive immune system. Mol. Cell 46: 606-615.
    • (2012) Mol. Cell , vol.46 , pp. 606-615
    • Sashital, D.G.1    Wiedenheft, B.2    Doudna, J.A.3
  • 77
    • 84874172103 scopus 로고    scopus 로고
    • CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein
    • Scholz I., S.J. Lange, S. Hein, W.R. Hess and R. Backofen. 2013. CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein. PLoS One 8: e56470.
    • (2013) PLoS One , vol.8
    • Scholz, I.1    Lange, S.J.2    Hein, S.3    Hess, W.R.4    Backofen, R.5
  • 80
    • 59749085509 scopus 로고    scopus 로고
    • Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism
    • Shah S.A., N.R. Hansen and R.A. Garrett. 2009. Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism. Biochem. Soc. Trans. 37: 23-28.
    • (2009) Biochem. Soc. Trans , vol.37 , pp. 23-28
    • Shah, S.A.1    Hansen, N.R.2    Garrett, R.A.3
  • 81
    • 84892453591 scopus 로고    scopus 로고
    • CRISPRs: Molecular signatures used for pathogen subtyping
    • Shariat N. and E.G. Dudley. 2014. CRISPRs: molecular signatures used for pathogen subtyping. Appl. Environ. Microbiol. 80: 430-439.
    • (2014) Appl. Environ. Microbiol. , vol.80 , pp. 430-439
    • Shariat, N.1    Dudley, E.G.2
  • 83
    • 39149142575 scopus 로고    scopus 로고
    • CRISPR - A widespread system that provides acquired resistance against phages in bacteria and archaea
    • Sorek R., V. Kunin and P. Hugenholtz. 2008. CRISPR - a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat. Rev. Microbiol. 6: 181-186.
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 181-186
    • Sorek, R.1    Kunin, V.2    Hugenholtz, P.3
  • 84
    • 84878936806 scopus 로고    scopus 로고
    • CRISPR-mediated adaptive immune systems in bacteria and archaea
    • Sorek R., C.M. Lawrence and B. Wiedenheft. 2013. CRISPR-mediated adaptive immune systems in bacteria and archaea. Ann. Rev. Biochem. 82: 237-266.
    • (2013) Ann. Rev. Biochem. , vol.82 , pp. 237-266
    • Sorek, R.1    Lawrence, C.M.2    Wiedenheft, B.3
  • 88
    • 77955085897 scopus 로고    scopus 로고
    • Self-targeting by CRISPR: Gene regulation or autoimmunity?
    • Stern A., L. Keren, O. Wurtzel, G. Amitai and R. Sorek. 2010. Self-targeting by CRISPR: gene regulation or autoimmunity? Trends Genet. 26: 335-340.
    • (2010) Trends Genet. , vol.26 , pp. 335-340
    • Stern, A.1    Keren, L.2    Wurtzel, O.3    Amitai, G.4    Sorek, R.5
  • 89
    • 84858659496 scopus 로고    scopus 로고
    • Mechanism of substrate selection by a highly specific CRISPR endoribonuclease
    • Sternberg S.H., R.E. Haurwitz and J.A. Doudna. 2012. Mechanism of substrate selection by a highly specific CRISPR endoribonuclease. RNA 18: 661-672.
    • (2012) RNA , vol.18 , pp. 661-672
    • Sternberg, S.H.1    Haurwitz, R.E.2    Doudna, J.A.3
  • 90
  • 91
    • 84860433123 scopus 로고    scopus 로고
    • CRISPR interference directs strand specific spacer acquisition
    • Swarts D.C., C. Mosterd, M.W. van Passel and S.J. Brouns. 2012. CRISPR interference directs strand specific spacer acquisition. PLoS One 7: e35888.
    • (2012) PLoS One , vol.7
    • Swarts, D.C.1    Mosterd, C.2    Van Passel, M.W.3    Brouns, S.J.4
  • 93
    • 67650756698 scopus 로고    scopus 로고
    • Analysis of CRISPR in Streptococcus mutans suggests frequent occurrence of acquired immunity against infection by M102-like bacteriophages
    • van der Ploeg J.R. 2009. Analysis of CRISPR in Streptococcus mutans suggests frequent occurrence of acquired immunity against infection by M102-like bacteriophages. Microbiology 155: 1966-1976.
    • (2009) Microbiology , vol.155 , pp. 1966-1976
    • Van Der Ploeg, J.R.1
  • 96
    • 34248331654 scopus 로고    scopus 로고
    • Regulation of dev, an operon that includes genes essential for Myxococcus xanthus development and CRISPR-associated genes and repeats
    • Viswanathan P., K. Murphy, B. Julien, A.G. Garza and L. Kroos. 2007. Regulation of dev, an operon that includes genes essential for Myxococcus xanthus development and CRISPR-associated genes and repeats. J. Bacteriol. 189: 3738-3750.
    • (2007) J. Bacteriol. , vol.189 , pp. 3738-3750
    • Viswanathan, P.1    Murphy, K.2    Julien, B.3    Garza, A.G.4    Kroos, L.5
  • 97
    • 79551694059 scopus 로고    scopus 로고
    • Interaction of the Cas6 riboendonuclease with CRISPR RNAs: Recognition and cleavage
    • Wang R., G. Preamplume, M.P. Terns, R.M. Terns and H. Li. 2011. Interaction of the Cas6 riboendonuclease with CRISPR RNAs: recognition and cleavage. Structure 19: 257-264.
    • (2011) Structure , vol.19 , pp. 257-264
    • Wang, R.1    Preamplume, G.2    Terns, M.P.3    Terns, R.M.4    Li, H.5
  • 100
  • 102
    • 66349134987 scopus 로고    scopus 로고
    • Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated genome defense
    • Wiedenheft B.,K. Zhou, M. Jinek, S.M. Coyle, W. Ma and J.A. Doudna. 2009. Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated genome defense. Structure 17: 904-912.
    • (2009) Structure , vol.17 , pp. 904-912
    • Wiedenheft, B.1    Zhou, K.2    Jinek, M.3    Coyle, S.M.4    Ma, W.5    Doudna, J.A.6
  • 103
    • 84857097177 scopus 로고    scopus 로고
    • RNAguided genetic silencing systems in bacteria and archaea
    • Wiedenheft B., S.H. Sternberg and J.A. Doudna. 2012. RNAguided genetic silencing systems in bacteria and archaea. Nature 482: 331-338.
    • (2012) Nature , vol.482 , pp. 331-338
    • Wiedenheft, B.1    Sternberg, S.H.2    Doudna, J.A.3
  • 104
    • 84861639567 scopus 로고    scopus 로고
    • Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli
    • Yosef I., M.G. Goren and U. Qimron. 2012. Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli. Nucleic Acids Res 40: 5569-5576.
    • (2012) Nucleic Acids Res , vol.40 , pp. 5569-5576
    • Yosef, I.1    Goren, M.G.2    Qimron, U.3
  • 105
    • 84883338164 scopus 로고    scopus 로고
    • DNA motifs determining the efficiency of adaptation into the Escherichia coli CRISPR array
    • Yosef I., D. Shitrit, M.G. Goren, D. Burstein, T. Pupko and U. Qimron. 2013. DNA motifs determining the efficiency of adaptation into the Escherichia coli CRISPR array. Proc. Natl. Acad. Sci. USA 110: 14396-14401.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 14396-14401
    • Yosef, I.1    Shitrit, D.2    Goren, M.G.3    Burstein, D.4    Pupko, T.5    Qimron, U.6
  • 106
    • 84867325709 scopus 로고    scopus 로고
    • The CRISPR associated protein Cas4 Is a 5' to 3' DNA exonuclease with an iron-sulfur cluster
    • Zhang J., T. Kasciukovic and M.F. White. 2012a. The CRISPR associated protein Cas4 Is a 5' to 3' DNA exonuclease with an iron-sulfur cluster. PLoS One 7: e47232.
    • (2012) PLoS One , vol.7
    • Zhang, J.1    Kasciukovic, T.2    White, M.F.3


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