메뉴 건너뛰기




Volumn 60, Issue 2, 2005, Pages 174-182

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

Author keywords

Bacteriophages; Conjugative plasmids; CRISPR; DNA repeats; Lateral gene transfer; Pathogenicity; Prokaryotic evolution

Indexed keywords

EXTRACHROMOSOMAL DNA; REPETITIVE DNA; ARCHAEAL DNA; BACTERIAL DNA; SPACER DNA;

EID: 16444385662     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-004-0046-3     Document Type: Article
Times cited : (1685)

References (40)
  • 2
    • 0036842339 scopus 로고    scopus 로고
    • The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence
    • DJ Banks SB Beres JM Musser 2002 The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence Trends Microbiol 10 515 521
    • (2002) Trends Microbiol , vol.10 , pp. 515-521
    • Banks, D.J.1    Beres, S.B.2    Musser, J.M.3
  • 4
    • 0035933282 scopus 로고    scopus 로고
    • Holliday junction resolving enzymes of archaeal viruses SIRV1 and SIRV2
    • RP Birkenbihl K Neef D Prangishvili B Kemper 2001 Holliday junction resolving enzymes of archaeal viruses SIRV1 and SIRV2 J Mol Biol 309 1067 1076
    • (2001) J Mol Biol , vol.309 , pp. 1067-1076
    • Birkenbihl, R.P.1    Neef, K.2    Prangishvili, D.3    Kemper, B.4
  • 6
    • 0036843960 scopus 로고    scopus 로고
    • Common themes among bacteriophage-encoded virulence factors and diversity among the bacteriophages involved
    • EF Boyd H Brussow 2002 Common themes among bacteriophage-encoded virulence factors and diversity among the bacteriophages involved Trends Microbiol 10 521 529
    • (2002) Trends Microbiol , vol.10 , pp. 521-529
    • Boyd, E.F.1    Brussow, H.2
  • 7
    • 2442483942 scopus 로고    scopus 로고
    • Genetic evidence of a coupling role for the TraG protein family in bacterial conjugation
    • E Cabezón JI Sastre F de la Cruz 1997 Genetic evidence of a coupling role for the TraG protein family in bacterial conjugation Mol Gen Genet 254 400 406
    • (1997) Mol Gen Genet , vol.254 , pp. 400-406
    • Cabezón, E.1    Sastre, J.I.2    De La Cruz, F.3
  • 9
    • 0033939735 scopus 로고    scopus 로고
    • Pathogenesis of group a streptococcal infections
    • MW Cunningham 2000 Pathogenesis of group A streptococcal infections Clin Microbiol Rev 13 470 511
    • (2000) Clin Microbiol Rev , vol.13 , pp. 470-511
    • Cunningham, M.W.1
  • 10
    • 0030879110 scopus 로고    scopus 로고
    • Contribution of different segments of the par region to stable maintenance of the broad-host-range plasmid RK2
    • CL Easter PA Sobecky DR Helinski 1997 Contribution of different segments of the par region to stable maintenance of the broad-host-range plasmid RK2 J Bacteriol 179 6472 6479
    • (1997) J Bacteriol , vol.179 , pp. 6472-6479
    • Easter, C.L.1    Sobecky, P.A.2    Helinski, D.R.3
  • 11
    • 0035836659 scopus 로고    scopus 로고
    • Complete genome sequence of an M1 strain of Streptococcus pyogenes
    • JJ Ferretti WM McShan D Ajdic 2001 Complete genome sequence of an M1 strain of Streptococcus pyogenes Proc Natl Acad Sci USA 98 4658 4663
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 4658-4663
    • Ferretti, J.J.1    McShan, W.M.2    Ajdic, D.3
  • 12
    • 0026516122 scopus 로고
    • Characterization of the F plasmid bifunctional conjugation gene traG
    • N Firth R Skurray 1992 Characterization of the F plasmid bifunctional conjugation gene traG Mol Gen Genet 232 145 153
    • (1992) Mol Gen Genet , vol.232 , pp. 145-153
    • Firth, N.1    Skurray, R.2
  • 13
    • 0035955375 scopus 로고    scopus 로고
    • Comparative genomics of Listeria species
    • P Glaser L Frangeul C Buchrieser 2001 Comparative genomics of Listeria species Science 294 849 852
    • (2001) Science , vol.294 , pp. 849-852
    • Glaser, P.1    Frangeul, L.2    Buchrieser, C.3
  • 14
    • 0023092429 scopus 로고
    • Two DNA antirestriction systems of bacteriophage P1, darA, and darB: Characterization of darA - Phages
    • S Iida MB Streiff TA Bickle W Arber 1987 Two DNA antirestriction systems of bacteriophage P1, darA, and darB: Characterization of darA - phages Virology 157 156 166
    • (1987) Virology , vol.157 , pp. 156-166
    • Iida, S.1    Streiff, M.B.2    Bickle, T.A.3    Arber, W.4
  • 15
    • 0036267740 scopus 로고    scopus 로고
    • Identification of genes that are associated with DNA repeats in prokaryotes
    • R Jansen JD Embden W Gaastra LM Schouls 2002 Identification of genes that are associated with DNA repeats in prokaryotes Mol Microbiol 43 1565 1575
    • (2002) Mol Microbiol , vol.43 , pp. 1565-1575
    • Jansen, R.1    Embden, J.D.2    Gaastra, W.3    Schouls, L.M.4
  • 16
    • 0035980098 scopus 로고    scopus 로고
    • Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7
    • Y Kawarabayasi Y Hino H Horikawa 2001 Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7 DNA Res 8 123 140
    • (2001) DNA Res , vol.8 , pp. 123-140
    • Kawarabayasi, Y.1    Hino, Y.2    Horikawa, H.3
  • 17
    • 0023055365 scopus 로고
    • D protein of miniF plasmid acts as a repressor of transcription and as a site-specific resolvase
    • D Lane R de Feyter M Kennedy SH Phua D Semon 1986 D protein of miniF plasmid acts as a repressor of transcription and as a site-specific resolvase Nucleic Acids Res 14 9713 9728
    • (1986) Nucleic Acids Res , vol.14 , pp. 9713-9728
    • Lane, D.1    De Feyter, R.2    Kennedy, M.3    Phua, S.H.4    Semon, D.5
  • 18
    • 0034801343 scopus 로고    scopus 로고
    • The genome of archaeal prophage Ψ M100 encodes the lytic enzyme responsible for autolysis of Methanothermobacter wolfeii
    • YN Luo P Pfister T Leisinger A Wasserfallen 2001 The genome of archaeal prophage Ψ M100 encodes the lytic enzyme responsible for autolysis of Methanothermobacter wolfeii J Bacteriol 183 5788 5792
    • (2001) J Bacteriol , vol.183 , pp. 5788-5792
    • Luo, Y.N.1    Pfister, P.2    Leisinger, T.3    Wasserfallen, A.4
  • 19
    • 0025861637 scopus 로고
    • Fine-structure analysis of the P1 plasmid partition site
    • KA Martin MA Davis S Austin 1991 Fine-structure analysis of the P1 plasmid partition site J Bacteriol 173 3630 3634
    • (1991) J Bacteriol , vol.173 , pp. 3630-3634
    • Martin, K.A.1    Davis, M.A.2    Austin, S.3
  • 20
    • 0036782279 scopus 로고    scopus 로고
    • Interactions among strategies associated with bacterial infection: Pathogenicity, epidemicity, and antibiotic resistance
    • JL Martínez F Baquero 2002 Interactions among strategies associated with bacterial infection: Pathogenicity, epidemicity, and antibiotic resistance Clin Microbiol Rev 15 647 679
    • (2002) Clin Microbiol Rev , vol.15 , pp. 647-679
    • Martínez, J.L.1    Baquero, F.2
  • 21
    • 0029166294 scopus 로고
    • Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning
    • FJM Mojica C Ferrer G Juez F Rodríguez-Valera 1995 Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning Mol Microbiol 17 85 93
    • (1995) Mol Microbiol , vol.17 , pp. 85-93
    • Mojica, F.J.M.1    Ferrer, C.2    Juez, G.3    Rodríguez-Valera, F.4
  • 22
    • 0034034401 scopus 로고    scopus 로고
    • Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria
    • FJM Mojica C Díez-Villaseñor E Soria G Juez 2000 Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria Mol Microbiol 36 244 246
    • (2000) Mol Microbiol , vol.36 , pp. 244-246
    • Mojica, F.J.M.1    Díez-Villaseñor, C.2    Soria, E.3    Juez, G.4
  • 24
    • 0021367325 scopus 로고
    • Standard reference strains of Escherichia coli from natural populations
    • H Ochman RK Selander 1984 Standard reference strains of Escherichia coli from natural populations J Bacteriol 157 690 693
    • (1984) J Bacteriol , vol.157 , pp. 690-693
    • Ochman, H.1    Selander, R.K.2
  • 26
    • 0345583680 scopus 로고    scopus 로고
    • A novel virus family, the Rudiviridae: Structure, virus-host interactions and genome variability of the Sulfolobus viruses SIRV1 and SIRV2
    • D Prangishvili HP Arnold D Gotz U Ziese I Holz JK Kristjansson W Zillig 1999 A novel virus family, the Rudiviridae: Structure, virus-host interactions and genome variability of the Sulfolobus viruses SIRV1 and SIRV2 Genetics 152 1387 1396
    • (1999) Genetics , vol.152 , pp. 1387-1396
    • Prangishvili, D.1    Arnold, H.P.2    Gotz, D.3    Ziese, U.4    Holz, I.5    Kristjansson, J.K.6    Zillig, W.7
  • 28
    • 0029128732 scopus 로고
    • A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating
    • C Schleper I Holz D Janekovic J Murphy W Zillig 1995 A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating J Bacteriol 177 4417 4426
    • (1995) J Bacteriol , vol.177 , pp. 4417-4426
    • Schleper, C.1    Holz, I.2    Janekovic, D.3    Murphy, J.4    Zillig, W.5
  • 29
    • 0032213855 scopus 로고    scopus 로고
    • Genetic profile of pNOB8 from Sulfolobus: The first conjugative plasmid from an archaeon
    • Q She H Phan RA Garrett SV Albers KM Stedman W Zillig 1998 Genetic profile of pNOB8 from Sulfolobus: The first conjugative plasmid from an archaeon Extremophiles 2 417 425
    • (1998) Extremophiles , vol.2 , pp. 417-425
    • She, Q.1    Phan, H.2    Garrett, R.A.3    Albers, S.V.4    Stedman, K.M.5    Zillig, W.6
  • 30
    • 0034945083 scopus 로고    scopus 로고
    • The complete genome of the crenarchaeon Sulfolobus solfataricus P2
    • Q She RK Singh F Confalonieri 2001 The complete genome of the crenarchaeon Sulfolobus solfataricus P2 Proc Natl Acad Sci USA 98 7835 7840
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 7835-7840
    • She, Q.1    Singh, R.K.2    Confalonieri, F.3
  • 31
    • 0036340447 scopus 로고    scopus 로고
    • Archaeal integrative genetic elements and their impact on genome evolution
    • Q She K Brugger L Chen 2002 Archaeal integrative genetic elements and their impact on genome evolution Res Microbiol 153 325 332
    • (2002) Res Microbiol , vol.153 , pp. 325-332
    • She, Q.1    Brugger, K.2    Chen, L.3
  • 32
    • 15644383855 scopus 로고    scopus 로고
    • Complete genome sequence of Methanobacterium thermoautotrophicum H: Functional analysis and comparative genomics
    • DR Smith LA DoucetteStamm C Deloughery 1997 Complete genome sequence of Methanobacterium thermoautotrophicum H: Functional analysis and comparative genomics J Bacteriol 179 7135 7155
    • (1997) J Bacteriol , vol.179 , pp. 7135-7155
    • Smith, D.R.1    Doucettestamm, L.A.2    Deloughery, C.3
  • 33
    • 0037007095 scopus 로고    scopus 로고
    • Genome sequence and comparative microarray analysis of serotype M18 group a Streptococcus strains associated with acute rheumatic fever outbreaks
    • JC Smoot KD Barbian JJ, Van Compel 2002 Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks Proc Natl Acad Sci USA 99 4668 4673
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4668-4673
    • Smoot, J.C.1    Barbian, K.D.2    Van Compel, J.J.3
  • 35
    • 0034460039 scopus 로고    scopus 로고
    • PING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: Insights into recombination and conjugation in Crenarchaeota
    • KM Stedman Q She H Phan I Holz H Singh D Prangishvili R Garrett W Zillig 2000 pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: Insights into recombination and conjugation in Crenarchaeota J Bacteriol 182 7014 7020
    • (2000) J Bacteriol , vol.182 , pp. 7014-7020
    • Stedman, K.M.1    She, Q.2    Phan, H.3    Holz, I.4    Singh, H.5    Prangishvili, D.6    Garrett, R.7    Zillig, W.8
  • 36
    • 0038054284 scopus 로고    scopus 로고
    • Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2
    • KM Stedman Q She H Phan HP Arnold I Holz RA Garrett W Zillig 2003 Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2 Res Microbiol 154 295 302
    • (2003) Res Microbiol , vol.154 , pp. 295-302
    • Stedman, K.M.1    She, Q.2    Phan, H.3    Arnold, H.P.4    Holz, I.5    Garrett, R.A.6    Zillig, W.7
  • 38
    • 0024211314 scopus 로고
    • Evidence that DNA helicase I and oriT site-specific nicking are both functions of the F Tral protein
    • BA Traxler EG Minkley Jr 1988 Evidence that DNA helicase I and oriT site-specific nicking are both functions of the F Tral protein J Mol Biol 5 205 209
    • (1988) J Mol Biol , vol.5 , pp. 205-209
    • Traxler, B.A.1    Minkley Jr., E.G.2
  • 39
    • 0026800935 scopus 로고
    • Bacteriophage lysis: Mechanism and regulation
    • R Young 1992 Bacteriophage lysis: Mechanism and regulation Microbiol Rev 56 430 481
    • (1992) Microbiol Rev , vol.56 , pp. 430-481
    • Young, R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.