메뉴 건너뛰기




Volumn 9, Issue 1, 2013, Pages

A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities

(32)  Vizeacoumar, Franco J a,b   Arnold, Roland a   Vizeacoumar, Frederick S c   Chandrashekhar, Megha a   Buzina, Alla a   Young, Jordan T F a,c   Kwan, Julian H M a   Sayad, Azin a   Mero, Patricia a   Lawo, Steffen a,c   Tanaka, Hiromasa a   Brown, Kevin R a   Baryshnikova, Anastasia a   Mak, Anthony B a   Fedyshyn, Yaroslav a   Wang, Yadong d   Brito, Glauber C a   Kasimer, Dahlia a   Makhnevych, Taras a   Ketela, Troy a   more..


Author keywords

genetic interaction; genome stability; mitotic stress; pooled shRNA screening

Indexed keywords

PHOSPHATIDYLINOSITOL 3,4,5 TRISPHOSPHATE 3 PHOSPHATASE; SHORT HAIRPIN RNA; PTEN PROTEIN, HUMAN; SMALL INTERFERING RNA; TUMOR PROTEIN;

EID: 84894825949     PISSN: None     EISSN: 17444292     Source Type: Journal    
DOI: 10.1038/msb.2013.54     Document Type: Article
Times cited : (76)

References (71)
  • 7
    • 84868032716 scopus 로고    scopus 로고
    • A missing link in genotype-directed cancer therapy
    • Bernards R, (2012) A missing link in genotype-directed cancer therapy. Cell 151: 465-468
    • (2012) Cell , vol.151 , pp. 465-468
    • Bernards, R.1
  • 9
    • 41149094376 scopus 로고    scopus 로고
    • CD83 regulates lymphocyte maturation, activation and homeostasis
    • Breloer M, Fleischer B, (2008) CD83 regulates lymphocyte maturation, activation and homeostasis. Trends Immunol 29: 186-194
    • (2008) Trends Immunol , vol.29 , pp. 186-194
    • Breloer, M.1    Fleischer, B.2
  • 12
  • 14
    • 0032511150 scopus 로고    scopus 로고
    • An ESP1/PDS1 complex regulates loss of sister chromatid cohesion at the metaphase to anaphase transition in yeast
    • Ciosk R, Zachariae W, Michaelis C, Shevchenko A, Mann M, Nasmyth K, (1998) An ESP1/PDS1 complex regulates loss of sister chromatid cohesion at the metaphase to anaphase transition in yeast. Cell 93: 1067-1076
    • (1998) Cell , vol.93 , pp. 1067-1076
    • Ciosk, R.1    Zachariae, W.2    Michaelis, C.3    Shevchenko, A.4    Mann, M.5    Nasmyth, K.6
  • 15
    • 36749082959 scopus 로고    scopus 로고
    • A UAF1-containing multisubunit protein complex regulates the Fanconi anemia pathway
    • Cohn MA, Kowal P, Yang K, Haas W, Huang TT, Gygi SP, D'Andrea AD, (2007) A UAF1-containing multisubunit protein complex regulates the Fanconi anemia pathway. Mol Cell 28: 786-797
    • (2007) Mol Cell , vol.28 , pp. 786-797
    • Cohn, M.A.1    Kowal, P.2    Yang, K.3    Haas, W.4    Huang, T.T.5    Gygi, S.P.6    D'Andrea, A.D.7
  • 24
    • 77956280407 scopus 로고    scopus 로고
    • PIK3CA mutation uncouples tumor growth and cyclin D1 regulation from MEK/ERK and mutant KRAS signaling
    • Halilovic E, She QB, Ye Q, Pagliarini R, Sellers WR, Solit DB, Rosen N, (2010) PIK3CA mutation uncouples tumor growth and cyclin D1 regulation from MEK/ERK and mutant KRAS signaling. Cancer Res 70: 6804-6814
    • (2010) Cancer Res , vol.70 , pp. 6804-6814
    • Halilovic, E.1    She, Q.B.2    Ye, Q.3    Pagliarini, R.4    Sellers, W.R.5    Solit, D.B.6    Rosen, N.7
  • 25
  • 27
    • 33644865206 scopus 로고    scopus 로고
    • Haploinsufficiency of the Mus81-Eme1 endonuclease activates the intra-S-phase and G2/M checkpoints and promotes rereplication in human cells
    • Hiyama T, Katsura M, Yoshihara T, Ishida M, Kinomura A, Tonda T, Asahara T, Miyagawa K, (2006) Haploinsufficiency of the Mus81-Eme1 endonuclease activates the intra-S-phase and G2/M checkpoints and promotes rereplication in human cells. Nucleic Acids Res 34: 880-892
    • (2006) Nucleic Acids Res , vol.34 , pp. 880-892
    • Hiyama, T.1    Katsura, M.2    Yoshihara, T.3    Ishida, M.4    Kinomura, A.5    Tonda, T.6    Asahara, T.7    Miyagawa, K.8
  • 28
    • 79953289737 scopus 로고    scopus 로고
    • Mapping of signaling networks through synthetic genetic interaction analysis by RNAi
    • Horn T, Sandmann T, Fischer B, Axelsson E, Huber W, Boutros M, (2011) Mapping of signaling networks through synthetic genetic interaction analysis by RNAi. Nat Methods 8: 341-346
    • (2011) Nat Methods , vol.8 , pp. 341-346
    • Horn, T.1    Sandmann, T.2    Fischer, B.3    Axelsson, E.4    Huber, W.5    Boutros, M.6
  • 30
    • 84856094560 scopus 로고    scopus 로고
    • Differential network biology
    • Ideker T, Krogan NJ, (2012) Differential network biology. Mol Syst Biol 8: 565
    • (2012) Mol Syst Biol , vol.8 , pp. 565
    • Ideker, T.1    Krogan, N.J.2
  • 32
    • 84864326893 scopus 로고    scopus 로고
    • Molecular biology. Use and abuse of RNAi to study mammalian gene function
    • Kaelin WG Jr, (2012) Molecular biology. Use and abuse of RNAi to study mammalian gene function. Science 337: 421-422
    • (2012) Science , vol.337 , pp. 421-422
    • Kaelin, Jr.W.G.1
  • 36
    • 4944222854 scopus 로고    scopus 로고
    • PTEN gene targeting reveals a radiation-induced size checkpoint in human cancer cells
    • Lee C, Kim JS, Waldman T, (2004) PTEN gene targeting reveals a radiation-induced size checkpoint in human cancer cells. Cancer Res 64: 6906-6914
    • (2004) Cancer Res , vol.64 , pp. 6906-6914
    • Lee, C.1    Kim, J.S.2    Waldman, T.3
  • 37
    • 33746525415 scopus 로고    scopus 로고
    • Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways
    • Lehner B, Crombie C, Tischler J, Fortunato A, Fraser AG, (2006) Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Nat Genet 38: 896-903
    • (2006) Nat Genet , vol.38 , pp. 896-903
    • Lehner, B.1    Crombie, C.2    Tischler, J.3    Fortunato, A.4    Fraser, A.G.5
  • 42
    • 61449182121 scopus 로고    scopus 로고
    • Principles of cancer therapy: Oncogene and non-oncogene addiction
    • Luo J, Solimini NL, Elledge SJ, (2009b) Principles of cancer therapy: oncogene and non-oncogene addiction. Cell 136: 823-837
    • (2009) Cell , vol.136 , pp. 823-837
    • Luo, J.1    Solimini, N.L.2    Elledge, S.J.3
  • 43
    • 4644326931 scopus 로고    scopus 로고
    • Genomic analysis of regulatory network dynamics reveals large topological changes
    • Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, Gerstein M, (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431: 308-312
    • (2004) Nature , vol.431 , pp. 308-312
    • Luscombe, N.M.1    Babu, M.M.2    Yu, H.3    Snyder, M.4    Teichmann, S.A.5    Gerstein, M.6
  • 46
    • 62549124623 scopus 로고    scopus 로고
    • Specific synthetic lethal killing of RAD54B-deficient human colorectal cancer cells by FEN1 silencing
    • McManus KJ, Barrett IJ, Nouhi Y, Hieter P, (2009) Specific synthetic lethal killing of RAD54B-deficient human colorectal cancer cells by FEN1 silencing. Proc Natl Acad Sci USA 106: 3276-3281
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 3276-3281
    • McManus, K.J.1    Barrett, I.J.2    Nouhi, Y.3    Hieter, P.4
  • 47
    • 33947592830 scopus 로고    scopus 로고
    • Off-target effects associated with long dsRNAs in Drosophila RNAi screens
    • Moffat J, Reiling JH, Sabatini DM, (2007) Off-target effects associated with long dsRNAs in Drosophila RNAi screens. Trends Pharmacol Sci 28: 149-151
    • (2007) Trends Pharmacol Sci , vol.28 , pp. 149-151
    • Moffat, J.1    Reiling, J.H.2    Sabatini, D.M.3
  • 49
    • 79958030960 scopus 로고    scopus 로고
    • The USP1/UAF1 complex promotes double-strand break repair through homologous recombination
    • Murai J, Yang K, Dejsuphong D, Hirota K, Takeda S, D'Andrea AD, (2011) The USP1/UAF1 complex promotes double-strand break repair through homologous recombination. Mol Cell Biol 31: 2462-2469
    • (2011) Mol Cell Biol , vol.31 , pp. 2462-2469
    • Murai, J.1    Yang, K.2    Dejsuphong, D.3    Hirota, K.4    Takeda, S.5    D'Andrea, A.D.6
  • 50
    • 0037007074 scopus 로고    scopus 로고
    • Suppression of genome instability by redundant S-phase checkpoint pathways in Saccharomyces cerevisiae
    • Myung K, Kolodner RD, (2002) Suppression of genome instability by redundant S-phase checkpoint pathways in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 99: 4500-4507
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4500-4507
    • Myung, K.1    Kolodner, R.D.2
  • 52
    • 13444256478 scopus 로고    scopus 로고
    • Inparanoid: A comprehensive database of eukaryotic orthologs
    • O'Brien KP, Remm M, Sonnhammer EL, (2005) Inparanoid: a comprehensive database of eukaryotic orthologs. Nucleic Acids Res 33: D476-D480
    • (2005) Nucleic Acids Res , vol.33 , pp. D476-D480
    • O'Brien, K.P.1    Remm, M.2    Sonnhammer, E.L.3
  • 53
    • 1542330121 scopus 로고    scopus 로고
    • Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase
    • Obuse C, Yang H, Nozaki N, Goto S, Okazaki T, Yoda K, (2004) Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase. Genes Cells 9: 105-120
    • (2004) Genes Cells , vol.9 , pp. 105-120
    • Obuse, C.1    Yang, H.2    Nozaki, N.3    Goto, S.4    Okazaki, T.5    Yoda, K.6
  • 56
    • 76249097011 scopus 로고    scopus 로고
    • Proapoptotic kinase MST2 coordinates signaling crosstalk between RASSF1A, Raf-1, and Akt
    • Romano D, Matallanas D, Weitsman G, Preisinger C, Ng T, Kolch W, (2010) Proapoptotic kinase MST2 coordinates signaling crosstalk between RASSF1A, Raf-1, and Akt. Cancer Res 70: 1195-1203
    • (2010) Cancer Res , vol.70 , pp. 1195-1203
    • Romano, D.1    Matallanas, D.2    Weitsman, G.3    Preisinger, C.4    Ng, T.5    Kolch, W.6
  • 58
    • 0022650568 scopus 로고
    • Methotrexate resistance and gene amplification. Mechanisms and implications
    • Schimke RT, (1986) Methotrexate resistance and gene amplification. Mechanisms and implications. Cancer 57: 1912-1917
    • (1986) Cancer , vol.57 , pp. 1912-1917
    • Schimke, R.T.1
  • 59
    • 77953413882 scopus 로고    scopus 로고
    • Networking of differentially expressed genes in human cancer cells resistant to methotrexate
    • Selga E, Oleaga C, Ramirez S, de Almagro MC, Noe V, Ciudad CJ, (2009) Networking of differentially expressed genes in human cancer cells resistant to methotrexate. Genome Med 1: 83
    • (2009) Genome Med , vol.1 , pp. 83
    • Selga, E.1    Oleaga, C.2    Ramirez, S.3    De Almagro, M.C.4    Noe, V.5    Ciudad, C.J.6
  • 60
    • 0027905014 scopus 로고
    • Altered growth of human colon cancer cell lines disrupted at activated Ki-ras
    • Shirasawa S, Furuse M, Yokoyama N, Sasazuki T, (1993) Altered growth of human colon cancer cell lines disrupted at activated Ki-ras. Science 260: 85-88
    • (1993) Science , vol.260 , pp. 85-88
    • Shirasawa, S.1    Furuse, M.2    Yokoyama, N.3    Sasazuki, T.4
  • 65
    • 0030011128 scopus 로고    scopus 로고
    • Uncoupling of S phase and mitosis induced by anticancer agents in cells lacking p21
    • Waldman T, Lengauer C, Kinzler KW, Vogelstein B, (1996) Uncoupling of S phase and mitosis induced by anticancer agents in cells lacking p21. Nature 381: 713-716
    • (1996) Nature , vol.381 , pp. 713-716
    • Waldman, T.1    Lengauer, C.2    Kinzler, K.W.3    Vogelstein, B.4
  • 66
    • 79954507728 scopus 로고    scopus 로고
    • RRM1 gene expression in peripheral blood is predictive of shorter survival in Chinese patients with advanced non-small-cell lung cancer treated by gemcitabine and platinum
    • Wang LR, Zhang GB, Chen J, Li J, Li MW, Xu N, Wang Y, Shentu JZ, (2011) RRM1 gene expression in peripheral blood is predictive of shorter survival in Chinese patients with advanced non-small-cell lung cancer treated by gemcitabine and platinum. Journal Zhejiang Univ Sci B 12: 174-179
    • (2011) Journal Zhejiang Univ Sci B , vol.12 , pp. 174-179
    • Wang, L.R.1    Zhang, G.B.2    Chen, J.3    Li, J.4    Li, M.W.5    Xu, N.6    Wang, Y.7    Shentu, J.Z.8
  • 69
    • 0033575347 scopus 로고    scopus 로고
    • Identification of a vertebrate sister-chromatid separation inhibitor involved in transformation and tumorigenesis
    • Zou H, McGarry TJ, Bernal T, Kirschner MW, (1999) Identification of a vertebrate sister-chromatid separation inhibitor involved in transformation and tumorigenesis. Science 285: 418-422
    • (1999) Science , vol.285 , pp. 418-422
    • Zou, H.1    McGarry, T.J.2    Bernal, T.3    Kirschner, M.W.4
  • 70
    • 84856405512 scopus 로고    scopus 로고
    • The mystery of missing heritability: Genetic interactions create phantom heritability
    • Zuk O, Hechter E, Sunyaev SR, Lander ES, (2012) The mystery of missing heritability: Genetic interactions create phantom heritability. Proc Natl Acad Sci USA 109: 1193-1198
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 1193-1198
    • Zuk, O.1    Hechter, E.2    Sunyaev, S.R.3    Lander, E.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.