Biodiversity, dynamics and ecology of bacterial community during grape marc storage for the production of grappa

International Journal of Food Microbiology

Volumn 162, Issue 2, 2013, Pages 143-151

  Maragkoudakis, Petros A ^a,d   Nardi, Tiziana ^b,e   Bovo, Barbara ^a   D'Andrea, Maura ^b   Howell, Kate S ^c   Giacomini, Alessio ^a,b   Corich, Viviana ^a,b  

^a DAFNAE Department of Agronomy Food Natural Resources Animals and Environment   (Italy)

^b UNIVERSITY OF PADOVA   (Italy)

^c UNIVERSITY OF MELBOURNE   (Australia)

^d JOINT RESEARCH CENTRE   (Italy)

^e LALLEMAND SAS   (France)

Author keywords

Antimicrobial activity; Biofilm; Genotyping; Grape marc; Lactobacillus plantarum

Indexed keywords

RNA 16S;

ACETOBACTER; ACETOBACTER GHANENSIS; ACIDIFICATION; ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIAL COLONIZATION; BACTERIAL STRAIN; BIODIVERSITY; BIOFILM; CONTROLLED STUDY; ECOLOGY; FERMENTATION; FOOD PROCESSING; GENE SEQUENCE; GRAPE; LACTOBACILLUS PLANTARUM; MICROBIAL COMMUNITY; NONHUMAN; NUCLEOTIDE SEQUENCE; OENOCOCCUS OENI; POPULATION DYNAMICS; PREVALENCE; STORAGE; TATUMELLA; TATUMELLA PTYSEOS; TATUMELLA TERREA; WINE;

EID: 84873974355     PISSN: 01681605     EISSN: 18793460     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2013.01.005     Document Type: Article

References (62)

1. Apostolopoulou A.A., Flouros A.I., Demertzis P.G., Akrida-Demertzi K. Differences in concentration of principal volatile constituents in traditional Greek distillates. Food Control 2005, 16:157-164.
2. Bae S., Fleet G.H., Heard G.M. Lactic acid bacteria associated with wine grapes from several Australian vineyards. Journal of Applied Microbiology 2006, 100:712-727.
3. Bovo B., Andrighetto C., Carlot M., Corich V., Lombardi A., Giacomini A. Yeast population dynamics during pilot-scale storage of grape marcs for the production of Grappa, a traditional Italian alcoholic beverage. International Journal of Food Microbiology 2009, 129:221-228.
4. Bovo B., Fontana F., Giacomini A., Corich V. Effects of yeast inoculation on volatile compound production by grape marcs. Annals of Microbiology 2010, 61:117-124.
5. Bovo B., Giacomini A., Corich V. Effects of grape marcs acidification treatment on the evolution of indigenous yeast populations during the production of grappa. Journal of Applied Microbiology 2011, 111:382-388.
6. Bovo B., Nardi T., Fontana F., Carlot M., Giacomini A., Corich V. Acidification of grape marc for alcoholic beverage production: effects on indigenous microflora and aroma profile after distillation. International Journal of Food Microbiology 2012, 152:100-106.
7. Cabras P., Angioni A. Pesticide residues in grapes, wine, and their processing products. Journal of Agricultural and Food Chemistry 2000, 48:967-973.
8. Capozzi V., Russo P., Ladero V., Fernandez M., Fiocco D., Alvarez M.A., Grieco F., Spano G. Biogenic amines degradation by Lactobacillus plantarum: toward a potential application in wine. Frontiers in Microbiology 2012, 3:122.
9. Cleenwerck I., Camu N., Engelbeen K., De Winter T., Vandemeulebroecke K., De Vos P., De Vuyst L. Acetobacter ghanensis sp. nov., a novel acetic acid bacterium isolated from traditional heap fermentations of Ghanaian cocoa beans. International Journal of Systematic and Evolutionary Microbiology 2007, 57:1647-1652.
10. Corich V., Giacomini A., Vendramini E., Vian P., Carlot M., Concheri G., Polone E., Casella S., Nuti M.P., Squartini S. Long term evaluation of field-released genetically modified rhizobia. Environmental Biosafety Research 2007, 6:167-181.
11. Cortés S., Salgado J.M., Rodríguez N., Domínguez J.M. The storage of grape marc: limiting factor in the quality of the distillate. Food Control 2010, 22:673-680.
12. Costerton J.W., Lewandowski Z., Caldwell D.E., Korber D.R., Lappin-Scott H.M. Microbial biofilms. Annual Review of Microbiology 1995, 49:711-745.
13. Da Porto C. Volatile composition of grappa low wines' using different methods and conditions of storage on an industrial scale. International Journal of Food Science and Technology 2002, 37:395-402.
14. Davis C.R., Wibowo D., Eschenbruch R., Lee T.H., Fleet G.H. Practical implications of malolactic fermentation: a review. American Journal of Enology and Viticulture 1985, 36:290-301.
15. De Bruyne K., Camu N., De Vuyst L., Vandamme P. Lactobacillus fabifermentans sp. nov. and Lactobacillus cacaonum sp. nov., isolated from Ghanaian cocoa fermentations. International Journal of Systematic and Evolutionary Microbiology 2009, 59:7-12.
16. De Pina C.G., Hogg T.A. Microbial and chemical changes during the spontaneous ensilage of grape marc. Journal of Applied Microbiology 1999, 86:777-784.
17. de Rosa T., Castagner R. Tecnologia delle grappe e dei distillati d'uva 1994, Edagricole, Bologna.
18. Delfini C., Costa A. Effects of the grape must lees and insoluble materials on the alcoholic fermentation rate and the production of acetic acid, pyruvic acid, and acetaldehyde. American Journal of Enology and Viticulture 1993, 44:86-92.
19. EEC Council Regulation 1989, (http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=CONSLEG:1989R1576:20070101:EN:PDF. No. 1576/89, 29 May 1989).
20. Filonow A.B., Vishniac H.S., Anderson J.A., Janisiewicz W.J. Biological control of Botrytis cinerea in apple by yeasts from various habitats and their putative mechanisms of antagonism. Biological Control 1996, 7:212-220.
21. Garcia-Armisen T., Papalexandratou Z., Hendryckx H., Camu N., Vrancken G., De Vuyst L., Cornelis P. Diversity of the total bacterial community associated with Ghanaian and Brazilian cocoa bean fermentation samples as revealed by a 16 S rRNA gene clone library. Applied Microbiology and Biotechnology 2010, 87:2281-2292.
22. Gerogiannaki-Christopoulou M., Kyriakidis N.V., Athanasopoulos P.E. The evaluation of grape marc distillates from selected red grape varieties. International Journal of Food Science and Technology 2006, 41:854-860.
23. Gevers D., Huys G., Swings J. Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. FEMS Microbiology Letters 2001, 205:31-36.
24. Green S.R., Gray P.P. A differential procedure applicable to bacteriological investigation in brewing. Wallerstein Laboratory Communications 1962, 13:357-366.
25. Gu C.T., Wang F., Li C.Y., Liu F., Huo G.C. Lactobacillus xiangfangensis sp. nov., a novel bacterium isolated from Chinese pickle. International Journal of Systematic and Evolutionary Microbiology 2012, 62:860-863.
26. Guerra E., Sordi G., Mannazzu I.M., Clementi F., Fatichenti F. Occurrence of wine yeasts on grapes subjected to different pesticide treatments. Italian Journal of Food Science 1999, 11:221-230.
27. Holzapfel W.H., Geisen R., Schillinger U. Biological preservation of foods with reference to protective cultures, bacteriocins and food-grade enzymes. International Journal of Food Microbiology 1995, 24:343-362.
28. Kalathenos P., Sutherland J.P., Roberts T.A. Resistance of some wine spoilage yeasts to combinations of ethanol and acids present in wine. Journal of Applied Microbiology 1995, 78:245-250.
29. Kawarai T., Furukawa S., Ogihara H., Yamasaki M. Mixed-species biofilm formation by lactic acid bacteria and rice wine yeasts. Applied and Environmental Microbiology 2007, 73:4673-4676.
30. Korakli M., Pavlovic M., Gänzle M.G., Vogel R.F. Exopolysaccharide and kestose production by Lactobacillus sanfranciscensis LTH2590. Applied and Environmental Microbiology 2003, 69:2073-2079.
31. Kostinek M., Ban-Koffi L., Ottah-Atikpo M., Teniola D., Schillinger U., Holzapfel W.H., Franz C.M. Diversity of predominant lactic acid bacteria associated with cocoa fermentation in Nigeria. Current Microbiology 2008, 56:306-314.
32. Kudo M., Vagnoli P., Bisson L.F. Imbalance of pH and potassium concentration as a cause of stuck fermentations. American Journal of Enology and Viticolture 1998, 49:295-301.
33. Leal-Sánchez M.V., Ruiz-Barba J.L., Sánchez A.H., Rejano L., Jiménez-Díaz R., Garrido A. Fermentation profile and optimization of green olive fermentation using Lactobacillus plantarum LPCO10 as a starter culture. Food Microbiology 2003, 20:421-430.
34. Lee S.H., Frank J.F. Inactivation of surface-adherent Listeria monocytogenes hypochlorite and heat. Journal of Food Protection 1991, 54:4-6.
35. Lerm E., Engelbrecht L., du Toit M. Selection and characterisation of Oenococcus oeni and Lactobacillus plantarum South African wine isolates for use as malolactic fermentation starter cultures. South African Journal of Enology and Viticulture 2011, 32:280-295.
36. Llauberes R.M., Richard B., Lonvaud A., Dubourdieu D., Fournet B. Structure of an exocellular beta-D-glucan from Pediococcus sp., a wine lactic bacteria. Carbohydrate Research 1990, 203:103-107.
37. Lo Curto R.B., Tripodo M.M. Yeast production from virgin grape marc. Bioresource Technology 2001, 78:5-9.
38. Mah T.F., O'Toole G.A. Mechanisms of biofilm resistance to antimicrobial agents. Trends in Microbiology 2001, 9:34-39.
39. Manitto P., Chialva F., Speranza G., Rinaldo C. Absolute stereochemistry and enantiomeric excess of 2-butanol in distilled spirits of different origin. Journal of Agricultural and Food Chemistry 1994, 42:886-889.
40. Maragkoudakis P.A., Zoumpopoulou G., Miaris C., Kalantzopoulos G., Pot B., Tsakalidou E. Probiotic potential of Lactobacillus strains isolated from dairy products. International Dairy Journal 2006, 16:189-199.
41. Miller B.J., Franz C.M., Cho G.S., du Toit M. Expression of the malolactic enzyme gene (mle) from Lactobacillus plantarum under winemaking conditions. Current Microbiology 2011, 62:1682-1688.
42. Morris C.E., Monier J., Jacques M. Methods for observing microbial biofilms directly on leaf surfaces and recovering them for isolation of culturable microorganisms. Applied and Environmental Microbiology 1997, 63:1570-1576.
43. Muresu R., Sulas L., Polone E., Squartini A. PCR primers based on different portions of insertion elements can assist genetic relatedness studies, strain fingerprinting and species identification in rhizobia. FEMS Microbiology Ecology 2005, 54:445-453.
44. Nykanen L. Formation and occurrence of flavor compounds in wine and distilled alcoholic beverages. American Journal of Enology and Viticulture 1986, 37:84-96.
45. O'Toole G.A., Pratt L.A., Watnick P.I., Newman D.K., Weaver V.B., Kolter R. Genetic approaches to study of biofilms. Methods in Enzymology 1999, 310:91-109.
46. Pozo-Bayon M.A., G-Alegria E., Polo M.C., Tenorio C., Martin-Alvarez P.J., Calvo de la Banda M.T., Ruiz-Larrea F., Moreno-Arribas M.V. Wine volatile and amino acid composition after malolactic fermentation: effect of Oenococcus oeni and Lactobacillus plantarum starter cultures. Journal of Agricultural and Food Chemistry 2005, 53:8729-8735.
47. Rayner J., Veeh R., Flood J. Prevalence of microbial biofilms on selected fresh produce and household surfaces. International Journal of Food Microbiology 2004, 95:29-39.
48. Renouf V., Claisse O., Lonvaud-Funel A. Understanding the microbial ecosystem on the grape berry surface through numeration and identification of yeast and bacteria. Australian Journal of Grape and Wine Research 2005, 11:316-327.
49. Richard G., Yu S., Monsan P., Remaud-Simeon M., Morel S. A novel family of glucosyl 1,5-anhydro-d-fructose derivatives synthesised by transglucosylation with dextransucrase from Leuconostoc mesenteroides NRRL B-512F. Carbohydrate Research 2005, 340:395-401.
50. Rodas A.M., Ferrer S., Pardo I. 16S-ARDRA, a tool for identification of lactic acid bacteria isolated from grape must and wine. Systematic and Applied Microbiology 2003, 26:412-422.
51. Rodriguez H., Curiel J.A., Landete J.M., de las Rivas B., Lopez de Felipe F., Gomez-Cordoves C., Mancheno J.M., Munoz R. Food phenolics and lactic acid bacteria. International Journal of Food Microbiology 2009, 132:79-90.
52. Rojo-Bezares B., Saenz Y., Navarro L., Zarazaga M., Ruiz-Larrea F., Torres C. Coculture-inducible bacteriocin activity of Lactobacillus plantarum strain J23 isolated from grape must. Food Microbiology 2007, 24:482-491.
53. Ruiz-Barba J.L., Jimenez-Diaz R. Vitamin and amino acid requirements of Lactobacillus plantarum strains isolated from green olive fermentations. Journal of Applied Bacteriology 1994, 76:350-355.
54. Silva M.L., Malcata F.X. Effect of time and temperature of fermentation on the microflora of grape marc. Bioprocess and Biosystems Engineering 2000, 23:17-24.
55. Silva C.F., Batista L.R., Abreu L.M., Dias E.S., Schwan R.F. Succession of bacterial and fungal communities during natural coffee (Coffea arabica) fermentation. Food Microbiology 2008, 25:951-957.
56. Terrade N., Mira de Orduña R. Determination of the essential nutrient requirements of wine-related bacteria from the genera Oenococcus and Lactobacillus. International Journal of Food Microbiology 2009, 133:8-13.
57. Torija M.J., Mateo E., Guillamon J.M., Mas A. Identification and quantification of acetic acid bacteria in wine and vinegar by TaqMan-MGB probes. Food Microbiology 2010, 27:257-265.
58. Versalovic J., Schneider M., De Bruijn F.J., Lupski J.R. Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Methods in Molecular and Cellular Biology 1994, 5:25-40.
59. Versini G., Margheri G. Rapporto fra i costituenti volatili della Grappa e le caratteristiche organolettiche 1979, XXI:269-277. Vini d'Italia.
60. Weinberg Z.G., Ashbell G., Azrieli A. The effect of applying lactic bacteria at ensilage on the chemical and microbiological composition of vetch, wheat and alfalfa silages. Journal of Applied Microbiology 1988, 64:1-7.
61. Zarazaga M., Dizy M., Torres C., Ruiz-Larrea F. High tolerance of wild Lactobacillus plantarum and Oenococcus oeni strains to lyophilisation and stress environmental conditions of acid pH and ethanol. FEMS Microbiology Letters 2004, 230:53-61.
62. Zoumpopoulou G., Foligne B., Christodoulou K., Grangette C., Pot B., Tsakalidou E. Lactobacillus fermentum ACA-DC 179 displays probiotic potential in vitro and protects against trinitrobenzene sulfonic acid (TNBS)-induced colitis and Salmonella infection in murine models. International Journal of Food Microbiology 2008, 121:18-26.