Applicability of rep-PCR fingerprinting for identification of Lactobacillus species

FEMS Microbiology Letters

Volumn 205, Issue 1, 2001, Pages 31-36

  Gevers, Dirk ^a   Huys, Geert ^a   Swings, Jean ^a,b  

^a GHENT UNIVERSITY   (Belgium)

^b GHENT UNIVERSITY   (Belgium)

Author keywords

(GTG)5 PCR; DNA extraction; Fermented dry sausage; Identification; Lactobacillus

Indexed keywords

BACTERIAL DNA;

ARTICLE; BACTERIAL GROWTH; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CONTROLLED STUDY; DNA FINGERPRINTING; FERMENTATION; FOOD INDUSTRY; GENOTYPE; LACTIC ACID BACTERIUM; LACTOBACILLUS; MEAT; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SPECIES DIFFERENTIATION; STRAIN DIFFERENCE;

ANIMALS; BACTERIAL TYPING TECHNIQUES; DNA FINGERPRINTING; DNA PRIMERS; DNA, BACTERIAL; FERMENTATION; LACTOBACILLUS; MEAT PRODUCTS; POLYMERASE CHAIN REACTION; REPETITIVE SEQUENCES, NUCLEIC ACID; REPRODUCIBILITY OF RESULTS;

BACTERIA (MICROORGANISMS); LACTOBACILLUS;

EID: 0035960740     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1097(01)00439-6     Document Type: Article

References (22)

1. Taxonomy of lactic acid bacteria
2. Polyphasic taxonomy, a consensus approach to bacterial systematics
3. A polyphasic approach towards the identification of strains belonging to Lactobacillus acidophilus and related species
4. Comparison of ribotyping, randomly amplified polymorphic DNA analysis, and pulsed-field gel electrophoresis in typing of Lactobacillus rhamnosus and L. casei strains
5. Section 14: Regular, nonsporing Gram-positive rods
6. Analysis of electrophoretic whole-organism protein
7. Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse-transcriptase sequencing of 16S ribosomal-RNA
8. Differentiation of Lactobacillus species by molecular typing
9. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: Criteria for bacterial strain typing
10. Principles and applications of methods for DNA based typing of microbial organisms
11. Identification and phylogenetic analysis of Lactobacillus using multiplex RAPD-PCR
12. Characterization of Lactobacillus sakei strains associating with production of ropy slime by randomly amplified polymorphic DNA (RAPD) and pulsed-field gel electrophoresis (PFGE) patterns
13. Randomly amplified polymorphic DNA (RAPD) for rapid typing of Lactobacillus plantarum strains
14. Use of RAPD and 16S rDNA sequencing for the study of Lactobacillus population dynamics in natural whey culture
15. Evaluation of random amplified polymorphic DNA (RAPD)-PCR as a method to differentiate Lactobacillus acidophilus, Lactobacillus crispatus, Lactobacillus amylovorus, Lactobacillus gallinarum, Lactobacillus gasseri, and Lactobacillus johnsonii
16. Factors affecting reproducibility of random amplified polymorphic DNA-fingerprinting
17. Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction
18. DNA fingerprinting of thermophilic lactic acid bacteria using repetitive sequence-based polymerase chain reaction
19. Characterisation of ropy slime-producing Lactobacillus sakei using repetitive element sequence-based PCR
20. Molecular identification of Lactobacillus hilgardii and genetic relatedness with Lactobacillus brevis
21. Isolation and identification of tetracycline resistant lactic acid bacteria from pre-packed sliced meat products
22. Rhizobia isolated from root nodules of tropical leguminous trees characterized using DNA-DNA dot-blot hybridisation and rep-PCR genomic fingerprinting