-
1
-
-
3343003673
-
Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes
-
Abruzzi, K. C., S. Lacadie, and M. Rosbash. 2004. Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes. EMBO J. 23:2620-2631.
-
(2004)
EMBO J
, vol.23
, pp. 2620-2631
-
-
Abruzzi, K.C.1
Lacadie, S.2
Rosbash, M.3
-
2
-
-
19344363274
-
Cotranscriptional mRNP assembly: From the DNA to the nuclear pore
-
Aguilera, A. 2005. Cotranscriptional mRNP assembly: from the DNA to the nuclear pore. Curr. Opin. Cell Biol. 17:242-250.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 242-250
-
-
Aguilera, A.1
-
3
-
-
0037180825
-
The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila
-
Andrulis, E. D., J. Werner, A. Nazarian, H. Erdjument-Bromage, P. Tempst, and J. T. Lis. 2002. The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila. Nature 420:837-841.
-
(2002)
Nature
, vol.420
, pp. 837-841
-
-
Andrulis, E.D.1
Werner, J.2
Nazarian, A.3
Erdjument-Bromage, H.4
Tempst, P.5
Lis, J.T.6
-
4
-
-
0030987775
-
Transcription elongation through DNA arrest sites. A multistep process involving both RNA polymerase II subunit RPB9 and TFIIS
-
Awrey, D. E., R. G. Weilbaecher, S. A. Hemming, S. M. Orlicky, C. M. Kane, and A. M. Edwards. 1997. Transcription elongation through DNA arrest sites. A multistep process involving both RNA polymerase II subunit RPB9 and TFIIS. J. Biol. Chem. 272:14747-14754.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 14747-14754
-
-
Awrey, D.E.1
Weilbaecher, R.G.2
Hemming, S.A.3
Orlicky, S.M.4
Kane, C.M.5
Edwards, A.M.6
-
5
-
-
0034544815
-
Pre-mRNA processing factors are required for nuclear export
-
Brodsky, A. S., and P. A. Silver. 2000. Pre-mRNA processing factors are required for nuclear export. RNA 6:1737-1749.
-
(2000)
RNA
, vol.6
, pp. 1737-1749
-
-
Brodsky, A.S.1
Silver, P.A.2
-
6
-
-
19344365530
-
Connections between mRNA 3′ end processing and transcription termination
-
Buratowski, S. 2005. Connections between mRNA 3′ end processing and transcription termination. Curr. Opin. Cell Biol. 17:257-261.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 257-261
-
-
Buratowski, S.1
-
7
-
-
0034329461
-
A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae
-
Chávez, S., T. Beilharz, A. G. Rondon, H. Erdjument-Bromage, P. Tempst, J. Q. Svejstrup, T. Lithgow, and A. Aguilera. 2000. A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae. EMBO J. 19:5824-5834.
-
(2000)
EMBO J
, vol.19
, pp. 5824-5834
-
-
Chávez, S.1
Beilharz, T.2
Rondon, A.G.3
Erdjument-Bromage, H.4
Tempst, P.5
Svejstrup, J.Q.6
Lithgow, T.7
Aguilera, A.8
-
8
-
-
33748767376
-
Rho-dependent terminators and transcription termination
-
Ciampi, M. S. 2006. Rho-dependent terminators and transcription termination. Microbiology 152:2515-2528.
-
(2006)
Microbiology
, vol.152
, pp. 2515-2528
-
-
Ciampi, M.S.1
-
9
-
-
0142059889
-
In vivo evidence that defects in the transcriptional elongation factors RPB2, TFIIS, and SPT5 enhance upstream poly(A) site utilization
-
Cui, Y., and C. L. Denis. 2003. In vivo evidence that defects in the transcriptional elongation factors RPB2, TFIIS, and SPT5 enhance upstream poly(A) site utilization. Mol. Cell. Biol. 23:7887-7901.
-
(2003)
Mol. Cell. Biol
, vol.23
, pp. 7887-7901
-
-
Cui, Y.1
Denis, C.L.2
-
10
-
-
46949104585
-
The interaction network of the chaperonin CCT
-
Dekker, C., P. C. Stirling, E. A. McCormack, H. Filmore, A. Paul, R. L. Brost, M. Costanzo, C. Boone, M. R. Leroux, and K. R. Willison. 2008. The interaction network of the chaperonin CCT. EMBO J. 27:1827-1839.
-
(2008)
EMBO J
, vol.27
, pp. 1827-1839
-
-
Dekker, C.1
Stirling, P.C.2
McCormack, E.A.3
Filmore, H.4
Paul, A.5
Brost, R.L.6
Costanzo, M.7
Boone, C.8
Leroux, M.R.9
Willison, K.R.10
-
11
-
-
33750320374
-
Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes
-
Dieppois, G., N. Iglesias, and F. Stutz. 2006. Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes. Mol. Cell. Biol. 26:7858-7870.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 7858-7870
-
-
Dieppois, G.1
Iglesias, N.2
Stutz, F.3
-
12
-
-
36049041612
-
RNA quality control in eukaryotes
-
Doma, M. K., and R. Parker. 2007. RNA quality control in eukaryotes. Cell 131:660-668.
-
(2007)
Cell
, vol.131
, pp. 660-668
-
-
Doma, M.K.1
Parker, R.2
-
13
-
-
0141625269
-
Transcription through the roadblocks: The role of RNA polymerase cooperation
-
Epshtein, V., F. Toulme, A. R. Rahmouni, S. Borukhov, and E. Nudler. 2003. Transcription through the roadblocks: the role of RNA polymerase cooperation. EMBO J. 22:4719-4727.
-
(2003)
EMBO J
, vol.22
, pp. 4719-4727
-
-
Epshtein, V.1
Toulme, F.2
Rahmouni, A.R.3
Borukhov, S.4
Nudler, E.5
-
14
-
-
0026633013
-
6-Azauracil inhibition of GTP biosynthesis in Saccharomyces cerevisiae
-
Exinger, F., and F. Lacroute. 1992. 6-Azauracil inhibition of GTP biosynthesis in Saccharomyces cerevisiae. Curr. Genet. 22:9-11.
-
(1992)
Curr. Genet
, vol.22
, pp. 9-11
-
-
Exinger, F.1
Lacroute, F.2
-
15
-
-
22444435897
-
Process or perish: Quality control in mRNA biogenesis
-
Fasken, M. B., and A. H. Corbett. 2005. Process or perish: quality control in mRNA biogenesis. Nat. Struct. Mol. Biol. 12:482-488.
-
(2005)
Nat. Struct. Mol. Biol
, vol.12
, pp. 482-488
-
-
Fasken, M.B.1
Corbett, A.H.2
-
16
-
-
34547640820
-
A new connection of mRNP biogenesis and export with transcription-coupled repair
-
Gaillard, H., R. E. Wellinger, and A. Aguilera. 2007. A new connection of mRNP biogenesis and export with transcription-coupled repair. Nucleic Acids Res. 35:3893-3906.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3893-3906
-
-
Gaillard, H.1
Wellinger, R.E.2
Aguilera, A.3
-
17
-
-
37849036555
-
RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes
-
Glover-Cutter, K., S. Kim, J. Espinosa, and D. L. Bentley. 2008. RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes. Nat. Struct. Mol. Biol. 15:71-78.
-
(2008)
Nat. Struct. Mol. Biol
, vol.15
, pp. 71-78
-
-
Glover-Cutter, K.1
Kim, S.2
Espinosa, J.3
Bentley, D.L.4
-
18
-
-
0032213250
-
A simple polypyrimidine repeat acts as an artificial Rho-dependent terminator in vivo and in vitro
-
Guérin, M., N. Robichon, J. Geiselmann, and A. R. Rahmouni. 1998. A simple polypyrimidine repeat acts as an artificial Rho-dependent terminator in vivo and in vitro. Nucleic Acids Res. 26:4895-4900.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 4895-4900
-
-
Guérin, M.1
Robichon, N.2
Geiselmann, J.3
Rahmouni, A.R.4
-
19
-
-
0034634684
-
RNA polymerase II subunit Rpb9 regulates transcription elongation in vivo
-
Hemming, S. A., D. B. Jansma, P. F. Macgregor, A. Goryachev, J. D. Friesen, and A. M. Edwards. 2000. RNA polymerase II subunit Rpb9 regulates transcription elongation in vivo. J. Biol. Chem. 275:35506-35511.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 35506-35511
-
-
Hemming, S.A.1
Jansma, D.B.2
Macgregor, P.F.3
Goryachev, A.4
Friesen, J.D.5
Edwards, A.M.6
-
20
-
-
7544236961
-
Genome-wide mRNA surveillance is coupled to mRNA export
-
Hieronymus, H., M. C. Yu, and P. A. Silver. 2004. Genome-wide mRNA surveillance is coupled to mRNA export. Genes Dev. 18:2652-2662.
-
(2004)
Genes Dev
, vol.18
, pp. 2652-2662
-
-
Hieronymus, H.1
Yu, M.C.2
Silver, P.A.3
-
21
-
-
6344228542
-
Modulation of transcription affects mRNP quality
-
Jensen, T. H., J. Boulay, J. R. Olesen, J. Colin, M. Weyler, and D. Libri. 2004. Modulation of transcription affects mRNP quality. Mol. Cell 16:235-244.
-
(2004)
Mol. Cell
, vol.16
, pp. 235-244
-
-
Jensen, T.H.1
Boulay, J.2
Olesen, J.R.3
Colin, J.4
Weyler, M.5
Libri, D.6
-
22
-
-
0035975969
-
The DECD box putative ATPase Sub2p is an early mRNA export factor
-
Jensen, T. H., J. Boulay, M. Rosbash, and D. Libri. 2001. The DECD box putative ATPase Sub2p is an early mRNA export factor. Curr. Biol. 11:1711-1715.
-
(2001)
Curr. Biol
, vol.11
, pp. 1711-1715
-
-
Jensen, T.H.1
Boulay, J.2
Rosbash, M.3
Libri, D.4
-
23
-
-
0033782207
-
Identification of novel Saccharomyces cerevisiae proteins with nuclear export activity: Cell cycle-regulated transcription factor ace2p shows cell cycle-independent nucleocytoplasmic shuttling
-
Jensen, T. H., M. Neville, J. C. Rain, T. McCarthy, P. Legrain, and M. Rosbash. 2000. Identification of novel Saccharomyces cerevisiae proteins with nuclear export activity: cell cycle-regulated transcription factor ace2p shows cell cycle-independent nucleocytoplasmic shuttling. Mol. Cell. Biol. 20:8047-8058.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 8047-8058
-
-
Jensen, T.H.1
Neville, M.2
Rain, J.C.3
McCarthy, T.4
Legrain, P.5
Rosbash, M.6
-
24
-
-
0035022577
-
A block to mRNA nuclear export in S. cerevisiae leads to hyperadenylation of transcripts that accumulate at the site of transcription
-
Jensen, T. H., K. Patricio, T. McCarthy, and M. Rosbash. 2001. A block to mRNA nuclear export in S. cerevisiae leads to hyperadenylation of transcripts that accumulate at the site of transcription. Mol. Cell 7:887-898.
-
(2001)
Mol. Cell
, vol.7
, pp. 887-898
-
-
Jensen, T.H.1
Patricio, K.2
McCarthy, T.3
Rosbash, M.4
-
25
-
-
6344225535
-
Interactions among Rax1p, Rax2p, Bud8p, and Bud9p in marking cortical sites for bipolar bud-site selection in yeast
-
Kang, P. J., E. Angerman, K. Nakashima, J. R. Pringle, and H. O. Park. 2004. Interactions among Rax1p, Rax2p, Bud8p, and Bud9p in marking cortical sites for bipolar bud-site selection in yeast. Mol. Biol. Cell 15:5145-5157.
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 5145-5157
-
-
Kang, P.J.1
Angerman, E.2
Nakashima, K.3
Pringle, J.R.4
Park, H.O.5
-
26
-
-
44449103640
-
The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin
-
Kaplan, C. D., K. M. Larsson, and R. D. Kornberg. 2008. The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin. Mol. Cell 30:547-556.
-
(2008)
Mol. Cell
, vol.30
, pp. 547-556
-
-
Kaplan, C.D.1
Larsson, K.M.2
Kornberg, R.D.3
-
27
-
-
3042789281
-
mRNA capping enzyme activity is coupled to an early transcription elongation
-
Kim, H. J., S. H. Jeong, J. H. Heo, S. J. Jeong, S. T. Kim, H. D. Youn, J. W. Han, H. W. Lee, and E. J. Cho. 2004. mRNA capping enzyme activity is coupled to an early transcription elongation. Mol. Cell. Biol. 24:6184-6193.
-
(2004)
Mol. Cell. Biol
, vol.24
, pp. 6184-6193
-
-
Kim, H.J.1
Jeong, S.H.2
Heo, J.H.3
Jeong, S.J.4
Kim, S.T.5
Youn, H.D.6
Han, J.W.7
Lee, H.W.8
Cho, E.J.9
-
28
-
-
1542290655
-
Transitions in RNA polymerase II elongation complexes at the 3′ ends of genes
-
Kim, M., S. H. Ahn, N. J. Krogan, J. F. Greenblatt, and S. Buratowski. 2004. Transitions in RNA polymerase II elongation complexes at the 3′ ends of genes. EMBO J. 23:354-364.
-
(2004)
EMBO J
, vol.23
, pp. 354-364
-
-
Kim, M.1
Ahn, S.H.2
Krogan, N.J.3
Greenblatt, J.F.4
Buratowski, S.5
-
29
-
-
34648816826
-
Exporting RNA from the nucleus to the cytoplasm
-
Köhler, A., and E. Hurt. 2007. Exporting RNA from the nucleus to the cytoplasm. Nat. Rev. Mol. Cell Biol. 8:761-773.
-
(2007)
Nat. Rev. Mol. Cell Biol
, vol.8
, pp. 761-773
-
-
Köhler, A.1
Hurt, E.2
-
30
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky, P., E. J. Cho, and S. Buratowski. 2000. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev. 14:2452-2460.
-
(2000)
Genes Dev
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.J.2
Buratowski, S.3
-
31
-
-
0032574715
-
Escherichia coli rho factor induces release of yeast RNA polymerase II but not polymerase I or III
-
Lang, W. H., T. Platt, and R. H. Reeder. 1998. Escherichia coli rho factor induces release of yeast RNA polymerase II but not polymerase I or III. Proc. Natl. Acad. Sci. USA 95:4900-4905.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 4900-4905
-
-
Lang, W.H.1
Platt, T.2
Reeder, R.H.3
-
32
-
-
0031684847
-
Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae
-
Lennon, J. C., III, M. Wind, L. Saunders, M. B. Hock, and D. Reines. 1998. Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae. Mol. Cell. Biol. 18:5771-5779.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 5771-5779
-
-
Lennon III, J.C.1
Wind, M.2
Saunders, L.3
Hock, M.B.4
Reines, D.5
-
33
-
-
0036889142
-
Interactions between mRNA export commitment, 3′-end quality control, and nuclear degradation
-
Libri, D., K. Dower, J. Boulay, R. Thomsen, M. Rosbash, and T. H. Jensen. 2002. Interactions between mRNA export commitment, 3′-end quality control, and nuclear degradation. Mol. Cell. Biol. 22:8254-8266.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 8254-8266
-
-
Libri, D.1
Dower, K.2
Boulay, J.3
Thomsen, R.4
Rosbash, M.5
Jensen, T.H.6
-
34
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine, M. S., A. McKenzie, III, D. J. Demarini, N. G. Shah, A. Wach, A. Brachat, P. Philippsen, and J. R. Pringle. 1998. Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14:953-961.
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie III, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
35
-
-
20444366920
-
Interdependence between transcription and mRNP processing and export, and its impact on genetic stability
-
Luna, R., S. Jimeno, M. Marin, P. Huertas, M. Garcia-Rubio, and A. Aguilera. 2005. Interdependence between transcription and mRNP processing and export, and its impact on genetic stability. Mol. Cell 18:711-722.
-
(2005)
Mol. Cell
, vol.18
, pp. 711-722
-
-
Luna, R.1
Jimeno, S.2
Marin, M.3
Huertas, P.4
Garcia-Rubio, M.5
Aguilera, A.6
-
36
-
-
33646188087
-
Mutations in the Saccharomyces cerevisiae RPB1 gene conferring hypersensitivity to 6-azauracil
-
Malagon, F., M. L. Kireeva, B. K. Shafer, L. Lubkowska, M. Kashlev, and J. N. Strathern. 2006. Mutations in the Saccharomyces cerevisiae RPB1 gene conferring hypersensitivity to 6-azauracil. Genetics 172:2201-2209.
-
(2006)
Genetics
, vol.172
, pp. 2201-2209
-
-
Malagon, F.1
Kireeva, M.L.2
Shafer, B.K.3
Lubkowska, L.4
Kashlev, M.5
Strathern, J.N.6
-
37
-
-
15244358670
-
Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo
-
Mason, P. B., and K. Struhl. 2005. Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo. Mol. Cell 17:831-840.
-
(2005)
Mol. Cell
, vol.17
, pp. 831-840
-
-
Mason, P.B.1
Struhl, K.2
-
38
-
-
27644457087
-
A nuclear surveillance pathway for mRNAs with defective polyadenylation
-
Milligan, L., C. Torchet, C. Allmang, T. Shipman, and D. Tollervey. 2005. A nuclear surveillance pathway for mRNAs with defective polyadenylation. Mol. Cell. Biol. 25:9996-10004.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 9996-10004
-
-
Milligan, L.1
Torchet, C.2
Allmang, C.3
Shipman, T.4
Tollervey, D.5
-
39
-
-
0024841745
-
Yeast galactose permease is related to yeast and mammalian glucose transporters
-
Nehlin, J. O., M. Carlberg, and H. Ronne. 1989. Yeast galactose permease is related to yeast and mammalian glucose transporters. Gene 85:313-319.
-
(1989)
Gene
, vol.85
, pp. 313-319
-
-
Nehlin, J.O.1
Carlberg, M.2
Ronne, H.3
-
40
-
-
33644746221
-
RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo
-
Nesser, N. K., D. O. Peterson, and D. K. Hawley. 2006. RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo. Proc. Natl. Acad. Sci. USA 103:3268-3273.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 3268-3273
-
-
Nesser, N.K.1
Peterson, D.O.2
Hawley, D.K.3
-
41
-
-
0031717152
-
The RNA recognition motif of yeast translation initiation factor Tif3/eIF4B is required but not sufficient for RNA strand-exchange and translational activity
-
Niederberger, N., H. Trachsel, and M. Altmann. 1998. The RNA recognition motif of yeast translation initiation factor Tif3/eIF4B is required but not sufficient for RNA strand-exchange and translational activity. RNA 4:1259-1267.
-
(1998)
RNA
, vol.4
, pp. 1259-1267
-
-
Niederberger, N.1
Trachsel, H.2
Altmann, M.3
-
42
-
-
0029081051
-
Analysis of E. coli rho factor: Mutations affecting secondary-site interactions
-
Pereira, S., and T. Platt. 1995. Analysis of E. coli rho factor: mutations affecting secondary-site interactions. J. Mol. Biol. 251:30-40.
-
(1995)
J. Mol. Biol
, vol.251
, pp. 30-40
-
-
Pereira, S.1
Platt, T.2
-
43
-
-
0029862975
-
Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro
-
Powell, W., and D. Reines. 1996. Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro. J. Biol. Chem. 271:6866-6873.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 6866-6873
-
-
Powell, W.1
Reines, D.2
-
44
-
-
0041696782
-
Loading Rho to terminate transcription
-
Richardson, J. P. 2003. Loading Rho to terminate transcription. Cell 114:157-159.
-
(2003)
Cell
, vol.114
, pp. 157-159
-
-
Richardson, J.P.1
-
45
-
-
0037073063
-
Rho-dependent termination and ATPases in transcript termination
-
Richardson, J. P. 2002. Rho-dependent termination and ATPases in transcript termination. Biochim. Biophys. Acta 1577:251-260.
-
(2002)
Biochim. Biophys. Acta
, vol.1577
, pp. 251-260
-
-
Richardson, J.P.1
-
46
-
-
0019960564
-
rho Factors from polarity suppressor mutants with defects in their RNA interactions
-
Richardson, J. P., and J. L. Carey, III. 1982. rho Factors from polarity suppressor mutants with defects in their RNA interactions. J. Biol. Chem. 257:5767-5771.
-
(1982)
J. Biol. Chem
, vol.257
, pp. 5767-5771
-
-
Richardson, J.P.1
Carey III, J.L.2
-
47
-
-
0033562339
-
A Saccharomyces cerevisiae RNA 5′-triphosphatase related to mRNA capping enzyme
-
Rodriguez, C. R., T. Takagi, E. J. Cho, and S. Buratowski. 1999. A Saccharomyces cerevisiae RNA 5′-triphosphatase related to mRNA capping enzyme. Nucleic Acids Res. 27:2181-2188.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 2181-2188
-
-
Rodriguez, C.R.1
Takagi, T.2
Cho, E.J.3
Buratowski, S.4
-
49
-
-
53749089421
-
THO/Sub2p functions to coordinate 3′-end processing with gene-nuclear pore association
-
Rougemaille, M., G. Dieppois, E. Kisseleva-Romanova, R. K. Gudipati, S. Lemoine, C. Blugeon, J. Boulay, T. H. Jensen, F. Stutz, F. Devaux, and D. Libri. 2008. THO/Sub2p functions to coordinate 3′-end processing with gene-nuclear pore association. Cell 135:308-321.
-
(2008)
Cell
, vol.135
, pp. 308-321
-
-
Rougemaille, M.1
Dieppois, G.2
Kisseleva-Romanova, E.3
Gudipati, R.K.4
Lemoine, S.5
Blugeon, C.6
Boulay, J.7
Jensen, T.H.8
Stutz, F.9
Devaux, F.10
Libri, D.11
-
50
-
-
34247628538
-
Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants
-
Rougemaille, M., R. K. Gudipati, J. R. Olesen, R. Thomsen, B. Seraphin, D. Libri, and T. H. Jensen. 2007. Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants. EMBO J. 26:2317-2326.
-
(2007)
EMBO J
, vol.26
, pp. 2317-2326
-
-
Rougemaille, M.1
Gudipati, R.K.2
Olesen, J.R.3
Thomsen, R.4
Seraphin, B.5
Libri, D.6
Jensen, T.H.7
-
51
-
-
19344367418
-
Formation of export-competent mRNP: Escaping nuclear destruction
-
Saguez, C., J. R. Olesen, and T. H. Jensen. 2005. Formation of export-competent mRNP: escaping nuclear destruction. Curr. Opin. Cell Biol. 17:287-293.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 287-293
-
-
Saguez, C.1
Olesen, J.R.2
Jensen, T.H.3
-
52
-
-
46149091048
-
Nuclear mRNA surveillance in THO/sub2 mutants is triggered by inefficient polyadenylation
-
Saguez, C., M. Schmid, J. R. Olesen, M. A. Ghazy, X. Qu, M. B. Poulsen, T. Nasser, C. Moore, and T. H. Jensen. 2008. Nuclear mRNA surveillance in THO/sub2 mutants is triggered by inefficient polyadenylation. Mol. Cell 31:91-103.
-
(2008)
Mol. Cell
, vol.31
, pp. 91-103
-
-
Saguez, C.1
Schmid, M.2
Olesen, J.R.3
Ghazy, M.A.4
Qu, X.5
Poulsen, M.B.6
Nasser, T.7
Moore, C.8
Jensen, T.H.9
-
53
-
-
0032864002
-
Assaying the polyadenylation state of mRNAs
-
Sallés, F. J., W. G. Richards, and S. Strickland. 1999. Assaying the polyadenylation state of mRNAs. Methods 17:38-45.
-
(1999)
Methods
, vol.17
, pp. 38-45
-
-
Sallés, F.J.1
Richards, W.G.2
Strickland, S.3
-
54
-
-
0004136246
-
-
Sambrook, J, and D. W. Russel ed, 3rd ed. Cold Spring Harbor Press, Cold Spring Harbor, NY
-
Sambrook, J., and D. W. Russel (ed.). 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Press, Cold Spring Harbor, NY.
-
(2001)
Molecular cloning: A laboratory manual
-
-
-
56
-
-
0025362399
-
A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae
-
Schmitt, M. E., T. A. Brown, and B. L. Trumpower. 1990. A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res. 18:3091-3092.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 3091-3092
-
-
Schmitt, M.E.1
Brown, T.A.2
Trumpower, B.L.3
-
57
-
-
35748950148
-
Transcription termination factor rho can displace streptavidin from biotinylated RNA
-
Schwartz, A., E. Margeat, A. R. Rahmouni, and M. Boudvillain. 2007. Transcription termination factor rho can displace streptavidin from biotinylated RNA. J. Biol. Chem. 282:31469-31476.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 31469-31476
-
-
Schwartz, A.1
Margeat, E.2
Rahmouni, A.R.3
Boudvillain, M.4
-
58
-
-
34548104113
-
Noncanonical interactions in the management of RNA structural blocks by the transcription termination rho helicase
-
Schwartz, A., C. Walmacq, A. R. Rahmouni, and M. Boudvillain. 2007. Noncanonical interactions in the management of RNA structural blocks by the transcription termination rho helicase. Biochemistry 46:9366-9379.
-
(2007)
Biochemistry
, vol.46
, pp. 9366-9379
-
-
Schwartz, A.1
Walmacq, C.2
Rahmouni, A.R.3
Boudvillain, M.4
-
59
-
-
0030795544
-
Importin/karyopherin protein family members required for mRNA export from the nucleus
-
Seedorf, M., and P. A. Silver. 1997. Importin/karyopherin protein family members required for mRNA export from the nucleus. Proc. Natl. Acad. Sci. USA 94:8590-8595.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 8590-8595
-
-
Seedorf, M.1
Silver, P.A.2
-
60
-
-
0033805924
-
Saccharomyces cerevisiae transcription elongation mutants are defective in PUR5 induction in response to nucleotide depletion
-
Shaw, R. J., and D. Reines. 2000. Saccharomyces cerevisiae transcription elongation mutants are defective in PUR5 induction in response to nucleotide depletion. Mol. Cell. Biol. 20:7427-7437.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 7427-7437
-
-
Shaw, R.J.1
Reines, D.2
-
61
-
-
0024669291
-
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
-
Sikorski, R. S., and P. Hieter. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122:19-27.
-
(1989)
Genetics
, vol.122
, pp. 19-27
-
-
Sikorski, R.S.1
Hieter, P.2
-
62
-
-
11844255730
-
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin
-
Skordalakes, E., A. P. Brogan, B. S. Park, H. Kohn, and J. M. Berger. 2005. Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin. Structure 13:99-109.
-
(2005)
Structure
, vol.13
, pp. 99-109
-
-
Skordalakes, E.1
Brogan, A.P.2
Park, B.S.3
Kohn, H.4
Berger, J.M.5
-
63
-
-
19344363599
-
Quality control of messenger ribonucleoprotein particles in the nucleus and at the pore
-
Sommer, P., and U. Nehrbass. 2005. Quality control of messenger ribonucleoprotein particles in the nucleus and at the pore. Curr. Opin. Cell Biol. 17:294-301.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 294-301
-
-
Sommer, P.1
Nehrbass, U.2
-
64
-
-
0037118052
-
TREX is a conserved complex coupling transcription with messenger RNA export
-
Strässer, K., S. Masuda, P. Mason, J. Pfannstiel, M. Oppizzi, S. Rodriguez-Navarro, A. G. Rondon, A. Aguilera, K. Struhl, R. Reed, and E. Hurt. 2002. TREX is a conserved complex coupling transcription with messenger RNA export. Nature 417:304-308.
-
(2002)
Nature
, vol.417
, pp. 304-308
-
-
Strässer, K.1
Masuda, S.2
Mason, P.3
Pfannstiel, J.4
Oppizzi, M.5
Rodriguez-Navarro, S.6
Rondon, A.G.7
Aguilera, A.8
Struhl, K.9
Reed, R.10
Hurt, E.11
-
65
-
-
34250176526
-
Active genes at the nuclear pore complex
-
Taddei, A. 2007. Active genes at the nuclear pore complex. Curr. Opin. Cell Biol. 19:305-310.
-
(2007)
Curr. Opin. Cell Biol
, vol.19
, pp. 305-310
-
-
Taddei, A.1
-
66
-
-
3042526340
-
Dual role of boxB RNA motif in the mechanisms of termination/antitermination at the lambda tR1 terminator revealed in vivo
-
Vieu, E., and A. R. Rahmouni. 2004. Dual role of boxB RNA motif in the mechanisms of termination/antitermination at the lambda tR1 terminator revealed in vivo. J. Mol. Biol. 339:1077-1087.
-
(2004)
J. Mol. Biol
, vol.339
, pp. 1077-1087
-
-
Vieu, E.1
Rahmouni, A.R.2
-
67
-
-
50849133235
-
Nuclear quality control of RNA polymerase II ribonucleoproteins in yeast: Tilting the balance to shape the transcriptome
-
Villa, T., M. Rougemaille, and D. Libri. 2008. Nuclear quality control of RNA polymerase II ribonucleoproteins in yeast: tilting the balance to shape the transcriptome. Biochim. Biophys. Acta 1779:524-531.
-
(2008)
Biochim. Biophys. Acta
, vol.1779
, pp. 524-531
-
-
Villa, T.1
Rougemaille, M.2
Libri, D.3
-
68
-
-
2342523175
-
mRNA export: An assembly line from genes to nuclear pores
-
Vinciguerra, P., and F. Stutz. 2004. mRNA export: an assembly line from genes to nuclear pores. Curr. Opin. Cell Biol. 16:285-292.
-
(2004)
Curr. Opin. Cell Biol
, vol.16
, pp. 285-292
-
-
Vinciguerra, P.1
Stutz, F.2
-
69
-
-
33646489157
-
-
Walmacq, C., A. R. Rahmouni, and M. Boudvillain. 2006. Testing the steric exclusion model for hexameric helicases: substrate features that alter RNA-DNA unwinding by the transcription termination factor Rho. Biochemistry 45:5885-5895.
-
Walmacq, C., A. R. Rahmouni, and M. Boudvillain. 2006. Testing the steric exclusion model for hexameric helicases: substrate features that alter RNA-DNA unwinding by the transcription termination factor Rho. Biochemistry 45:5885-5895.
-
-
-
-
70
-
-
20444368036
-
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
-
Wyers, F., M. Rougemaille, G. Badis, J. C. Rousselle, M. E. Dufour, J. Boulay, B. Regnault, F. Devaux, A. Namane, B. Seraphin, D. Libri, and A. Jacquier. 2005. Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 121:725-737.
-
(2005)
Cell
, vol.121
, pp. 725-737
-
-
Wyers, F.1
Rougemaille, M.2
Badis, G.3
Rousselle, J.C.4
Dufour, M.E.5
Boulay, J.6
Regnault, B.7
Devaux, F.8
Namane, A.9
Seraphin, B.10
Libri, D.11
Jacquier, A.12
-
71
-
-
0036889334
-
Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p
-
Zenklusen, D., P. Vinciguerra, J. C. Wyss, and F. Stutz. 2002. Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p. Mol. Cell. Biol. 22:8241-8253.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 8241-8253
-
-
Zenklusen, D.1
Vinciguerra, P.2
Wyss, J.C.3
Stutz, F.4
-
72
-
-
0027195060
-
Transcription termination factor rho: The site of bicyclomycin inhibition in Escherichia coli
-
Zwiefka, A., H. Kohn, and W. R. Widger. 1993. Transcription termination factor rho: the site of bicyclomycin inhibition in Escherichia coli. Biochemistry 32:3564-3570.
-
(1993)
Biochemistry
, vol.32
, pp. 3564-3570
-
-
Zwiefka, A.1
Kohn, H.2
Widger, W.R.3
|