-
1
-
-
0034733496
-
Nucleotide excision repair in yeast
-
Prakash,S. and Prakash,L. (2000) Nucleotide excision repair in yeast. Mutat. Res., 451, 13-24.
-
(2000)
Mutat. Res
, vol.451
, pp. 13-24
-
-
Prakash, S.1
Prakash, L.2
-
2
-
-
0035946009
-
Controlling the efficiency of excision repair
-
Hanawalt,P.C. (2001) Controlling the efficiency of excision repair. Mutat. Res., 485, 3-13.
-
(2001)
Mutat. Res
, vol.485
, pp. 3-13
-
-
Hanawalt, P.C.1
-
3
-
-
0027999206
-
The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in Saccharomyces cerevisiae
-
Verhage,R., Zeeman,A.M., de Groot,N., Gleig,F., Bang,D.D., van de Putte,P. and Brouwer,J. (1994) The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in Saccharomyces cerevisiae. Mol. Cell. Biol., 14, 6135-6142.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 6135-6142
-
-
Verhage, R.1
Zeeman, A.M.2
de Groot, N.3
Gleig, F.4
Bang, D.D.5
van de Putte, P.6
Brouwer, J.7
-
4
-
-
0033118354
-
Molecular mechanism of nucleotide ixcision repair
-
de Laat,W.L., Jaspers,N.G. and Hoeijmakers,J.H. (1999) Molecular mechanism of nucleotide ixcision repair. Genes Dev., 13, 768-785.
-
(1999)
Genes Dev
, vol.13
, pp. 768-785
-
-
de Laat, W.L.1
Jaspers, N.G.2
Hoeijmakers, J.H.3
-
5
-
-
0036363646
-
Mechanisms of transcription-coupled DNA repair
-
Svejstrup,J.Q. (2002) Mechanisms of transcription-coupled DNA repair. Nat. Rev. Mol. Cell. Biol., 3, 21-29.
-
(2002)
Nat. Rev. Mol. Cell. Biol
, vol.3
, pp. 21-29
-
-
Svejstrup, J.Q.1
-
6
-
-
24044438505
-
Transcription-coupled repair: A complex affair
-
Mellon,I. (2005) Transcription-coupled repair: A complex affair. Mutat. Res., 577, 155-161.
-
(2005)
Mutat. Res
, vol.577
, pp. 155-161
-
-
Mellon, I.1
-
7
-
-
24044476230
-
Transcription arrest at DNA damage sites
-
Tornaletti,S. (2005) Transcription arrest at DNA damage sites. Mutat. Res., 577, 131-145.
-
(2005)
Mutat. Res
, vol.577
, pp. 131-145
-
-
Tornaletti, S.1
-
8
-
-
0026757373
-
Transcription, nucleosome stability, and DNA repair in a yeast minichromosome
-
Bedoyan,J., Gupta,R., Thoma,F. and Smerdon,M.J. (1992) Transcription, nucleosome stability, and DNA repair in a yeast minichromosome. J. Biol. Chem., 267, 5996-6005.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 5996-6005
-
-
Bedoyan, J.1
Gupta, R.2
Thoma, F.3
Smerdon, M.J.4
-
9
-
-
0025610725
-
Transcription preferentially inhibits nucleotide excision repair of the template DNA strand in vitro
-
Selby,C.P. and Sancar,A. (1990) Transcription preferentially inhibits nucleotide excision repair of the template DNA strand in vitro. J. Biol. Chem., 265, 21330-21336.
-
(1990)
J. Biol. Chem
, vol.265
, pp. 21330-21336
-
-
Selby, C.P.1
Sancar, A.2
-
10
-
-
0027905034
-
Molecular mechanism of transcription-repair coupling
-
Selby,C.P. and Sancar,A. (1993) Molecular mechanism of transcription-repair coupling. Science, 260, 53-58.
-
(1993)
Science
, vol.260
, pp. 53-58
-
-
Selby, C.P.1
Sancar, A.2
-
11
-
-
0034054019
-
Nucleotide excision repair and human syndromes
-
de Boer,J. and Hoeijmakers,J.H. (2000) Nucleotide excision repair and human syndromes. Carcinogenesis, 21, 453-460.
-
(2000)
Carcinogenesis
, vol.21
, pp. 453-460
-
-
de Boer, J.1
Hoeijmakers, J.H.2
-
12
-
-
0025341294
-
The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA
-
Venema,J., Mullenders,L.H., Natarajan,A.T., van Zeeland,A.A. and Mayne,L.V. (1990) The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA. Proc. Natl Acad. Sci. USA, 87, 4707-4711.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 4707-4711
-
-
Venema, J.1
Mullenders, L.H.2
Natarajan, A.T.3
van Zeeland, A.A.4
Mayne, L.V.5
-
13
-
-
0028109412
-
RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6
-
van Gool,A.J., Verhage,R., Swagemakers,S.M., van de Putte,P., Brouwer,J., Troelstra,C., Bootsma,D. and Hoeijmakers,J.H. (1994) RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6. EMBO J., 13, 5361-5369.
-
(1994)
EMBO J
, vol.13
, pp. 5361-5369
-
-
van Gool, A.J.1
Verhage, R.2
Swagemakers, S.M.3
van de Putte, P.4
Brouwer, J.5
Troelstra, C.6
Bootsma, D.7
Hoeijmakers, J.H.8
-
14
-
-
0032496215
-
Biochemical and biological characterization of wild-type and ATPase-deficient Cockayne syndrome B repair protein
-
Citterio,E., Rademakers,S., van der Horst,G.T., van Gool,A.J., Hoeijmakers,J.H. and Vermeulen,W. (1998) Biochemical and biological characterization of wild-type and ATPase-deficient Cockayne syndrome B repair protein. J. Biol. Chem., 273, 11844-11851.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 11844-11851
-
-
Citterio, E.1
Rademakers, S.2
van der Horst, G.T.3
van Gool, A.J.4
Hoeijmakers, J.H.5
Vermeulen, W.6
-
15
-
-
31444444611
-
Initiation of DNA repair mediated by a stalled RNA polymerase IIO
-
Laine,J.P. and Egly,J.M. (2006) Initiation of DNA repair mediated by a stalled RNA polymerase IIO. EMBO J., 25, 387-397.
-
(2006)
EMBO J
, vol.25
, pp. 387-397
-
-
Laine, J.P.1
Egly, J.M.2
-
16
-
-
26944448202
-
Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: Insights for transcription-coupled repair and Cockayne Syndrome
-
Sarker,A.H., Tsutakawa,S.E., Kostek,S., Ng,C., Shin,D.S., Peris,M., Campeau,E., Tainer,J.A., Nogales,E. et al. (2005) Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome. Mol. Cell, 20, 187-198.
-
(2005)
Mol. Cell
, vol.20
, pp. 187-198
-
-
Sarker, A.H.1
Tsutakawa, S.E.2
Kostek, S.3
Ng, C.4
Shin, D.S.5
Peris, M.6
Campeau, E.7
Tainer, J.A.8
Nogales, E.9
-
17
-
-
0036845496
-
Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae
-
Li,S. and Smerdon,M.J. (2002) Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae. EMBO J. 21, 5921-5929.
-
(2002)
EMBO J
, vol.21
, pp. 5921-5929
-
-
Li, S.1
Smerdon, M.J.2
-
18
-
-
33846001346
-
Modulation of Rad26 and Rpb9 mediated DNA repair by different promoter elements
-
Li,S., Chen,X., Ruggiero,C., Ding,B. and Smerdon,M.J. (2006) Modulation of Rad26 and Rpb9 mediated DNA repair by different promoter elements. J. Biol. Chem., 281, 36643-36651.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 36643-36651
-
-
Li, S.1
Chen, X.2
Ruggiero, C.3
Ding, B.4
Smerdon, M.J.5
-
19
-
-
0032584643
-
An integrated model of the transcription complex in elongation, termination, and editing
-
von Hippel,P.H. (1998) An integrated model of the transcription complex in elongation, termination, and editing. Science, 281, 660-665.
-
(1998)
Science
, vol.281
, pp. 660-665
-
-
von Hippel, P.H.1
-
20
-
-
0033579287
-
Binding of transcription termination protein nun to nascent RNA and template DNA
-
Watnick,R.S. and Gottesman,M.E. (1999) Binding of transcription termination protein nun to nascent RNA and template DNA. Science, 286, 2337-2339.
-
(1999)
Science
, vol.286
, pp. 2337-2339
-
-
Watnick, R.S.1
Gottesman, M.E.2
-
21
-
-
0029859295
-
UV-induced ubiquitination of RNA polymerase II: A novel modification deficient in Cockayne syndrome cells
-
Bregman,D.B., Halaban,R., van Gool,A.J., Henning,K.A., Friedberg,E.C. and Warren,S.L. (1996) UV-induced ubiquitination of RNA polymerase II: A novel modification deficient in Cockayne syndrome cells. Proc. Natl Acad. Sci. USA, 93, 11586-11590.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 11586-11590
-
-
Bregman, D.B.1
Halaban, R.2
van Gool, A.J.3
Henning, K.A.4
Friedberg, E.C.5
Warren, S.L.6
-
22
-
-
0032570562
-
Ultraviolet radiation-induced ubiquitination and proteasomal degradation of the large subunit of RNA polymerase II. Implications for transcription-coupled DNA repair
-
Ratner,J.N., Balasubramanian,B., Corden,J., Warren,S.L. and Bregman,D.B. (1998) Ultraviolet radiation-induced ubiquitination and proteasomal degradation of the large subunit of RNA polymerase II. Implications for transcription-coupled DNA repair. J. Biol. Chem., 273, 5184-5189.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 5184-5189
-
-
Ratner, J.N.1
Balasubramanian, B.2
Corden, J.3
Warren, S.L.4
Bregman, D.B.5
-
23
-
-
0032827035
-
Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae
-
Beaudenon,S.L., Huacani,M.R., Wang,G., McDonnell,D.P. and Huibregtse,J.M. (1999) Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae. Mol. Cell. Biol., 19, 6972-6979.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 6972-6979
-
-
Beaudenon, S.L.1
Huacani, M.R.2
Wang, G.3
McDonnell, D.P.4
Huibregtse, J.M.5
-
24
-
-
0035807072
-
Ultraviolet radiation alters the phosphorylation of RNA polymerase II large subunit and accelerates its proteasome-dependent degradation
-
Luo,Z., Zheng,J., Lu,Y. and Bregman,D.B. (2001) Ultraviolet radiation alters the phosphorylation of RNA polymerase II large subunit and accelerates its proteasome-dependent degradation. Mutat. Res., 486, 259-274.
-
(2001)
Mutat. Res
, vol.486
, pp. 259-274
-
-
Luo, Z.1
Zheng, J.2
Lu, Y.3
Bregman, D.B.4
-
25
-
-
0037326318
-
Rescue of arrested RNA polymerase II complexes
-
Svejstrup,J.Q. (2003) Rescue of arrested RNA polymerase II complexes. J. Cell Sci., 116, 447-451.
-
(2003)
J. Cell Sci
, vol.116
, pp. 447-451
-
-
Svejstrup, J.Q.1
-
26
-
-
3142691854
-
DNA damage-induced Def1-RNA polymerase II interaction and Def1 requirement for polymerase ubiquitylation in vitro
-
Reid,J. and Svejstrup,J.Q. (2004) DNA damage-induced Def1-RNA polymerase II interaction and Def1 requirement for polymerase ubiquitylation in vitro. J. Biol. Chem., 279, 29875-29878.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 29875-29878
-
-
Reid, J.1
Svejstrup, J.Q.2
-
27
-
-
20444428382
-
Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest
-
Somesh,B.P., Reid,J., Liu,W.F., Sogaard,T.M., Erdjument-Bromage,H., Tempst,P. and Svejstrup,J.Q. (2005) Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell, 121, 913-923.
-
(2005)
Cell
, vol.121
, pp. 913-923
-
-
Somesh, B.P.1
Reid, J.2
Liu, W.F.3
Sogaard, T.M.4
Erdjument-Bromage, H.5
Tempst, P.6
Svejstrup, J.Q.7
-
28
-
-
0037154967
-
Integrating mRNA processing with transcription
-
Proudfoot,N.J., Furger,A. and Dye,M.J. (2002) Integrating mRNA processing with transcription. Cell, 108, 501-512.
-
(2002)
Cell
, vol.108
, pp. 501-512
-
-
Proudfoot, N.J.1
Furger, A.2
Dye, M.J.3
-
29
-
-
0038699144
-
Coupling transcription, splicing and mRNA export
-
Reed,R. (2003) Coupling transcription, splicing and mRNA export. Curr. Opin. Cell Biol., 15, 326-331.
-
(2003)
Curr. Opin. Cell Biol
, vol.15
, pp. 326-331
-
-
Reed, R.1
-
30
-
-
19344363274
-
Cotranscriptional mRNP assembly: From the DNA to the nuclear pore
-
Aguilera,A. (2005) Cotranscriptional mRNP assembly: From the DNA to the nuclear pore. Curr. Opin. Cell Biol., 17, 242-250.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 242-250
-
-
Aguilera, A.1
-
31
-
-
0034329461
-
A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae
-
Chavez,S., Beilharz,T., Rondon,A.G., Erdjument-Bromage,H., Tempst,P., Svejstrup,J.Q., Lithgow,T. and Aguilera,A. (2000) A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae. EMBO J., 19, 5824-5834.
-
(2000)
EMBO J
, vol.19
, pp. 5824-5834
-
-
Chavez, S.1
Beilharz, T.2
Rondon, A.G.3
Erdjument-Bromage, H.4
Tempst, P.5
Svejstrup, J.Q.6
Lithgow, T.7
Aguilera, A.8
-
32
-
-
0037118052
-
TREX is a conserved complex coupling transcription with messenger RNA export
-
Strasser,K., Masuda,S., Mason,P., Pfannstiel,J., Oppizzi,M., Rodriguez-Navarro,S., Rondon,A.G., Aguilera,A., Struhl,K. et al. (2002) TREX is a conserved complex coupling transcription with messenger RNA export. Nature, 417, 304-308.
-
(2002)
Nature
, vol.417
, pp. 304-308
-
-
Strasser, K.1
Masuda, S.2
Mason, P.3
Pfannstiel, J.4
Oppizzi, M.5
Rodriguez-Navarro, S.6
Rondon, A.G.7
Aguilera, A.8
Struhl, K.9
-
33
-
-
0036889334
-
Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p
-
Zenklusen,D., Vinciguerra,P., Wyss,J.C. and Stutz,F. (2002) Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p. Mol. Cell. Biol., 22 8241-8253.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 8241-8253
-
-
Zenklusen, D.1
Vinciguerra, P.2
Wyss, J.C.3
Stutz, F.4
-
34
-
-
0141643143
-
Molecular evidence that the eukaryotic THO/TREX complex is required for efficient transcription elongation
-
Rondon,A.G., Jimeno,S., Garcia-Rubio,M. and Aguilera,A. (2003) Molecular evidence that the eukaryotic THO/TREX complex is required for efficient transcription elongation. J. Biol. Chem., 278, 39037-39043.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 39037-39043
-
-
Rondon, A.G.1
Jimeno, S.2
Garcia-Rubio, M.3
Aguilera, A.4
-
35
-
-
0032964808
-
The Saccharomyces cerevisiae hyperrecombination mutant hpr1Delta is synthetically lethal with two conditional alleles of the acetyl coenzyme A carboxylase gene and causes a defect in nuclear export of polyadenylated RNA
-
Schneiter,R., Guerra,C.E., Lampl,M., Gogg,G., Kohlwein,S.D. and Klein,H.L. (1999) The Saccharomyces cerevisiae hyperrecombination mutant hpr1Delta is synthetically lethal with two conditional alleles of the acetyl coenzyme A carboxylase gene and causes a defect in nuclear export of polyadenylated RNA. Mol. Cell. Biol., 19, 3415-3422.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 3415-3422
-
-
Schneiter, R.1
Guerra, C.E.2
Lampl, M.3
Gogg, G.4
Kohlwein, S.D.5
Klein, H.L.6
-
36
-
-
0036645687
-
-
Jimeno,S., Rondon.A.G., Luna,R. and Aguilera,A. (2002) The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability. EMBO J., 21, 3526-3535.
-
Jimeno,S., Rondon.A.G., Luna,R. and Aguilera,A. (2002) The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability. EMBO J., 21, 3526-3535.
-
-
-
-
37
-
-
33749609648
-
An hpr1 point mutation that impairs transcription and mRNP biogenesis without increasing recombination
-
Huertas,P., Garcia-Rubio,M.L., Wellinger,R.E., Luna,R. and Aguilera,A. (2006) An hpr1 point mutation that impairs transcription and mRNP biogenesis without increasing recombination. Mol. Cell. Biol., 26, 7451-7465.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 7451-7465
-
-
Huertas, P.1
Garcia-Rubio, M.L.2
Wellinger, R.E.3
Luna, R.4
Aguilera, A.5
-
38
-
-
18744370194
-
The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores
-
Fischer,T., Strasser,K., Racz,A., Rodriguez-Navarro,S., Oppizzi,M., Ihrig,P., Lechner,J. and Hurt,E. (2002) The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores. EMBO J., 21, 5843-5852.
-
(2002)
EMBO J
, vol.21
, pp. 5843-5852
-
-
Fischer, T.1
Strasser, K.2
Racz, A.3
Rodriguez-Navarro, S.4
Oppizzi, M.5
Ihrig, P.6
Lechner, J.7
Hurt, E.8
-
39
-
-
0037342695
-
Sac3 is an mRNA export factor that localizes to cytoplasmic fibrils of nuclear pore complex
-
Lei,E.P., Stern,C.A., Fahrenkrog,B., Krebber,H., Moy,T.I., Aebi,U. and Silver,P.A. (2003) Sac3 is an mRNA export factor that localizes to cytoplasmic fibrils of nuclear pore complex. Mol. Biol. Cell, 14, 836-847.
-
(2003)
Mol. Biol. Cell
, vol.14
, pp. 836-847
-
-
Lei, E.P.1
Stern, C.A.2
Fahrenkrog, B.3
Krebber, H.4
Moy, T.I.5
Aebi, U.6
Silver, P.A.7
-
40
-
-
0035156427
-
A new hyperrecombination mutation identifies a novel yeast gene, THP1, connecting transcription elongation with mitotic recombination
-
Gallardo,M. and Aguilera,A. (2001) A new hyperrecombination mutation identifies a novel yeast gene, THP1, connecting transcription elongation with mitotic recombination. Genetics, 157, 79-89.
-
(2001)
Genetics
, vol.157
, pp. 79-89
-
-
Gallardo, M.1
Aguilera, A.2
-
41
-
-
0038605527
-
Nab2p and the Thp1p-Sac3p complex functionally interact at the interface between transcription and mRNA metabolism
-
Gallardo,M., Luna,R., Erdjument-Bromage,H., Tempst,P. and Aguilera,A. (2003) Nab2p and the Thp1p-Sac3p complex functionally interact at the interface between transcription and mRNA metabolism. J. Biol. Chem. 278, 24225-24232.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 24225-24232
-
-
Gallardo, M.1
Luna, R.2
Erdjument-Bromage, H.3
Tempst, P.4
Aguilera, A.5
-
42
-
-
0037052951
-
Defective nucleotide excision repair in yeast hpr1 and tho2 mutants
-
Gonzalez-Barrera,S., Prado,F., Verhage,R., Brouwer,J. and Aguilera,A. (2002) Defective nucleotide excision repair in yeast hpr1 and tho2 mutants. Nucleic Acids Res., 30, 2193-2201.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2193-2201
-
-
Gonzalez-Barrera, S.1
Prado, F.2
Verhage, R.3
Brouwer, J.4
Aguilera, A.5
-
43
-
-
19344374094
-
TREX, SR proteins and export of mRNA
-
Reed,R. and Cheng,H. (2005) TREX, SR proteins and export of mRNA. Curr. Opin. Cell Biol., 17, 269-273.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 269-273
-
-
Reed, R.1
Cheng, H.2
-
44
-
-
12944334186
-
The spanish connection: Transcription and mRNA processing get even closer
-
Ares,M.Jr and Proudfoot,N.J. (2005) The spanish connection: transcription and mRNA processing get even closer. Cell, 120 163-166.
-
(2005)
Cell
, vol.120
, pp. 163-166
-
-
Ares Jr, M.1
Proudfoot, N.J.2
-
45
-
-
0010173139
-
A novel yeast gene, THO2, is involved in RNA pol II transcription and provides new evidence for transcriptional elongation-associated recombination
-
Piruat,J.I. and Aguilera,A. (1998) A novel yeast gene, THO2, is involved in RNA pol II transcription and provides new evidence for transcriptional elongation-associated recombination. EMBO J., 17, 4859-4872.
-
(1998)
EMBO J
, vol.17
, pp. 4859-4872
-
-
Piruat, J.I.1
Aguilera, A.2
-
46
-
-
0035975969
-
The DECD box putative ATPase Sub2p is an early mRNA export factor
-
Jensen,T.H., Boulay,J., Rosbash,M. and Libri,D. (2001) The DECD box putative ATPase Sub2p is an early mRNA export factor. Curr. Biol., 11, 1711-1715.
-
(2001)
Curr. Biol
, vol.11
, pp. 1711-1715
-
-
Jensen, T.H.1
Boulay, J.2
Rosbash, M.3
Libri, D.4
-
47
-
-
0033536026
-
A small nucleolar RNA:rIbozyme hybrid cleaves a nucleolar RNA target in vivo with near-perfect efficiency
-
Samarsky,D.A., Ferbeyre,G., Bertrand,E., Singer,R.H., Cedergren,R. and Fournier,M.J. (1999) A small nucleolar RNA:rIbozyme hybrid cleaves a nucleolar RNA target in vivo with near-perfect efficiency. Proc. Natl Acad. Sci. USA, 96, 6609-6614.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 6609-6614
-
-
Samarsky, D.A.1
Ferbeyre, G.2
Bertrand, E.3
Singer, R.H.4
Cedergren, R.5
Fournier, M.J.6
-
48
-
-
33645823661
-
Replication fork progression is impaired by transcription in hyperrecombinant yeast cells lacking a functional THO complex
-
Weflinger,R.E., Prado,F. and Aguilera,A. (2006) Replication fork progression is impaired by transcription in hyperrecombinant yeast cells lacking a functional THO complex. Mol. Cell. Biol., 26, 3327-3334.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 3327-3334
-
-
Weflinger, R.E.1
Prado, F.2
Aguilera, A.3
-
49
-
-
0033000673
-
Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photalyase for chromatin analysis in yeast
-
Suter,B., Livingstone-Zatchej,M. and Thoma,F. (1999) Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photalyase for chromatin analysis in yeast. Methods Enzymol., 304; 447-461.
-
(1999)
Methods Enzymol
, vol.304
, pp. 447-461
-
-
Suter, B.1
Livingstone-Zatchej, M.2
Thoma, F.3
-
50
-
-
0033064319
-
Mapping DNA interaction sites of chromosomal proteins using immunoprecipitation and polymerase chain reaction
-
Hecht,A. and Grunstein,M. (1999) Mapping DNA interaction sites of chromosomal proteins using immunoprecipitation and polymerase chain reaction. Methods Enzymol., 304, 399-414.
-
(1999)
Methods Enzymol
, vol.304
, pp. 399-414
-
-
Hecht, A.1
Grunstein, M.2
-
51
-
-
0035180388
-
Multiple roles for the yeast SUB2/yUAP56 gene in-splicing
-
Libri,D., Graziani,N., Saguez,C. and Boulay,J. (2001) Multiple roles for the yeast SUB2/yUAP56 gene in-splicing. Genes Dev., 15, 36-41.
-
(2001)
Genes Dev
, vol.15
, pp. 36-41
-
-
Libri, D.1
Graziani, N.2
Saguez, C.3
Boulay, J.4
-
52
-
-
0030658835
-
Recovery of RNA polymerase II synthesis following DNA damage in mutants of Saccharomyces cerevisiae defective in nucleotide excision repair
-
Reagan,M.S. and Friedberg,E.C. (1997) Recovery of RNA polymerase II synthesis following DNA damage in mutants of Saccharomyces cerevisiae defective in nucleotide excision repair. Nucleic Acids Res., 25, 4257-4263.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4257-4263
-
-
Reagan, M.S.1
Friedberg, E.C.2
-
53
-
-
0037148786
-
A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage
-
Woudstra,E.C., Gilbert,C., Fellows,J., Jansen,L., Brouwer,J., Erdjument-Bromage,H., Tempst,P. and Svejstrup,J.Q. (2002) A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage. Nature, 415, 929-933.
-
(2002)
Nature
, vol.415
, pp. 929-933
-
-
Woudstra, E.C.1
Gilbert, C.2
Fellows, J.3
Jansen, L.4
Brouwer, J.5
Erdjument-Bromage, H.6
Tempst, P.7
Svejstrup, J.Q.8
-
54
-
-
15244358670
-
Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo
-
Mason,P.B. and Struhl,K. (2005) Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo. Mol. Cell, 17, 831-840.
-
(2005)
Mol. Cell
, vol.17
, pp. 831-840
-
-
Mason, P.B.1
Struhl, K.2
-
55
-
-
33646589650
-
Cockayne syndrome B protein regulates the transcriptional program after UV irradiation
-
Proietti-De-Santis,L., Drane,P. and Egly,J.M. (2006) Cockayne syndrome B protein regulates the transcriptional program after UV irradiation. EMBO J., 25, 1915-1923.
-
(2006)
EMBO J
, vol.25
, pp. 1915-1923
-
-
Proietti-De-Santis, L.1
Drane, P.2
Egly, J.M.3
-
56
-
-
0037415686
-
Molecular evidence for a positive role of Spt4 in transcription elongation
-
Rondon,A.G., Garcia-Rubio,M., Gonzalez-Barrera,S. and Aguilera,A. (2003) Molecular evidence for a positive role of Spt4 in transcription elongation. EMBO J., 22, 612-620.
-
(2003)
EMBO J
, vol.22
, pp. 612-620
-
-
Rondon, A.G.1
Garcia-Rubio, M.2
Gonzalez-Barrera, S.3
Aguilera, A.4
-
57
-
-
0034388027
-
Spt4 modulates Rad26 requirement in transcription-coupled nucleotide excision repair
-
Jansen,L.E., den Dulk,H., Brouns,R.M., de Ruijter,M., Brandsma,J.A. and Brouwer,J. (2000) Spt4 modulates Rad26 requirement in transcription-coupled nucleotide excision repair. EMBO J., 19 6498-6507.
-
(2000)
EMBO J
, vol.19
, pp. 6498-6507
-
-
Jansen, L.E.1
den Dulk, H.2
Brouns, R.M.3
de Ruijter, M.4
Brandsma, J.A.5
Brouwer, J.6
-
58
-
-
2342501365
-
Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization
-
Casolari,J.M., Brown,C.R., Komili,S., West,J., Hieronymus,H. and Silver,P.A. (2004) Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization. Cell, 117, 427-439.
-
(2004)
Cell
, vol.117
, pp. 427-439
-
-
Casolari, J.M.1
Brown, C.R.2
Komili, S.3
West, J.4
Hieronymus, H.5
Silver, P.A.6
-
59
-
-
10744233477
-
Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery
-
Rodriguez-Navarro,S., Fischer,T., Luo,M.J., Antunez,O., Brettschneider,S., Lechner,J., Perez-Ortin,J.E., Reed,R. and Hurt,E. (2004) Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery. Cell 116, 75-86.
-
(2004)
Cell
, vol.116
, pp. 75-86
-
-
Rodriguez-Navarro, S.1
Fischer, T.2
Luo, M.J.3
Antunez, O.4
Brettschneider, S.5
Lechner, J.6
Perez-Ortin, J.E.7
Reed, R.8
Hurt, E.9
-
60
-
-
33750320374
-
Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes
-
Dieppois,G., Iglesias,N. and Stutz,F. (2006) Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes. Mol. Cell. Biol., 26, 7858-7870.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 7858-7870
-
-
Dieppois, G.1
Iglesias, N.2
Stutz, F.3
-
61
-
-
22344456265
-
A structural perspective of CTD function
-
Meinhart,A., Kamenski,T., Hoeppner,S., Baumli,S. and Cramer,P. (2005) A structural perspective of CTD function. Genes Dev., 19, 1401-1415.
-
(2005)
Genes Dev
, vol.19
, pp. 1401-1415
-
-
Meinhart, A.1
Kamenski, T.2
Hoeppner, S.3
Baumli, S.4
Cramer, P.5
-
62
-
-
19344365530
-
Connections between mRNA 3′ end processing and transcription termination
-
Buratowski,S. (2005) Connections between mRNA 3′ end processing and transcription termination. Curr. Opin. Cell Biol., 17, 257-261.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 257-261
-
-
Buratowski, S.1
-
63
-
-
0031775217
-
Defective Kin28, a subunit of yeast TFIIH, impairs transcription-coupled but not global genome nucleotide excision repair
-
Tijsterman,M., Tasseron-de Jong,J.G., Verhage,R.A. and Brouwer,J. (1998) Defective Kin28, a subunit of yeast TFIIH, impairs transcription-coupled but not global genome nucleotide excision repair. Mutal. Res., 409, 181-188.
-
(1998)
Mutal. Res
, vol.409
, pp. 181-188
-
-
Tijsterman, M.1
Tasseron-de Jong, J.G.2
Verhage, R.A.3
Brouwer, J.4
-
64
-
-
0035820074
-
UV light-induced degradation of RNA polymerase II is dependent on the Cockayne's syndrome A and B proteins but not p53 or MLH1
-
McKay,B.C., Chen,F., Clarke,S.T., Wiggin,H.E., Harley,L.M. and Ljungman,M. (2001) UV light-induced degradation of RNA polymerase II is dependent on the Cockayne's syndrome A and B proteins but not p53 or MLH1. Mutat. Res., 485, 93-105.
-
(2001)
Mutat. Res
, vol.485
, pp. 93-105
-
-
McKay, B.C.1
Chen, F.2
Clarke, S.T.3
Wiggin, H.E.4
Harley, L.M.5
Ljungman, M.6
-
65
-
-
10944232674
-
Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS
-
Kettenberger,H., Armache,K.J. and Cramer,P. (2004) Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol. Cell, 16, 955-965.
-
(2004)
Mol. Cell
, vol.16
, pp. 955-965
-
-
Kettenberger, H.1
Armache, K.J.2
Cramer, P.3
-
66
-
-
8344234112
-
Structural basis of transcription: Nucleotide selection by rotation in the RNA polymerase II active center
-
Westover,K.D., Bushnell,D.A. and Komberg,R.D. (2004) Structural basis of transcription: Nucleotide selection by rotation in the RNA polymerase II active center. Cell, 119, 481-489.
-
(2004)
Cell
, vol.119
, pp. 481-489
-
-
Westover, K.D.1
Bushnell, D.A.2
Komberg, R.D.3
-
67
-
-
0141819093
-
Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination
-
Huertas,P. and Aguilera,A. (2003) Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination. Mol. Cell, 12, 711-721.
-
(2003)
Mol. Cell
, vol.12
, pp. 711-721
-
-
Huertas, P.1
Aguilera, A.2
-
68
-
-
0030804783
-
RNA polymerase II stalled at a thymine dimer: Footprint and effect on excision repair
-
Selby,C.P., Drapkin,R., Reinberg,D. and Sancar,A. (1997) RNA polymerase II stalled at a thymine dimer: Footprint and effect on excision repair. Nucleic Acids Res., 25, 787-793.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 787-793
-
-
Selby, C.P.1
Drapkin, R.2
Reinberg, D.3
Sancar, A.4
|