-
1
-
-
0001842441
-
Adding backbone to protein folding: Why proteins are polypeptides
-
B Honig FE Cohen 1996 Adding backbone to protein folding: why proteins are polypeptides Fold Des 1 R17 R20
-
(1996)
Fold des
, vol.1
-
-
Honig, B.1
Cohen, F.E.2
-
2
-
-
0015859467
-
Principles that govern the folding of protein chains
-
CB Anfinsen 1973 Principles that govern the folding of protein chains Science 181 223 230
-
(1973)
Science
, vol.181
, pp. 223-230
-
-
Anfinsen, C.B.1
-
3
-
-
67349189383
-
The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain
-
CB Anfinsen E Haber M Sela FH White Jr 1961 The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain Proc Natl Acad Sci USA 47 1309 1314
-
(1961)
Proc Natl Acad Sci USA
, vol.47
, pp. 1309-1314
-
-
Anfinsen, C.B.1
Haber, E.2
Sela, M.3
White Jr, F.H.4
-
4
-
-
0002006297
-
Are there protein folding pathways?
-
C Levinthal 1968 Are there protein folding pathways? J Chim Phys 65 44 45
-
(1968)
J Chim Phys
, vol.65
, pp. 44-45
-
-
Levinthal, C.1
-
5
-
-
0001861319
-
How to fold graciously
-
In: DeBrunner JTP, Munck E (Eds) Mossbauer spectroscopy in biological systems
-
Levinthal C (1969) How to fold graciously. In: DeBrunner JTP, Munck E (Eds) Mossbauer spectroscopy in biological systems. University of Illinois Bulletin, vol 67, pp 22-24
-
(1969)
University of Illinois Bulletin
, vol.67
, pp. 22-24
-
-
Levinthal, C.1
-
6
-
-
0030626588
-
The Levinthal paradox: Yesterday and today
-
M Karplus 1997 The Levinthal paradox: yesterday and today Fold Des 2 S69 S75
-
(1997)
Fold des
, vol.2
-
-
Karplus, M.1
-
7
-
-
0022555899
-
Disulfide bonds as probes of protein folding pathways
-
TE Creighton 1986 Disulfide bonds as probes of protein folding pathways Methods Enzymol 131 83 106 (Pubitemid 16002197)
-
(1986)
Methods in Enzymology
, vol.131
, pp. 83-106
-
-
Creighton, T.E.1
-
8
-
-
48249156678
-
The search for folding intermediates and the mechanism of protein folding
-
RL Baldwin 2008 The search for folding intermediates and the mechanism of protein folding Annu Rev Biophys 37 1 21
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 1-21
-
-
Baldwin, R.L.1
-
9
-
-
0026342528
-
FASTRUN: A special purpose, hardwired computer for molecular simulation
-
R Fine G Dimmler C Levinthal 1991 FASTRUN: a special purpose, hardwired computer for molecular simulation Proteins 11 242 253
-
(1991)
Proteins
, vol.11
, pp. 242-253
-
-
Fine, R.1
Dimmler, G.2
Levinthal, C.3
-
10
-
-
0015987426
-
Prediction of protein conformation
-
PY Chou GD Fasman 1974 Prediction of protein conformation Biochemistry 13 222 245
-
(1974)
Biochemistry
, vol.13
, pp. 222-245
-
-
Chou, P.Y.1
Fasman, G.D.2
-
11
-
-
0026723063
-
Protein folding funnels: A kinetic approach to the sequence-structure relationship
-
PE Leopold M Montal JN Onuchic 1992 Protein folding funnels: a kinetic approach to the sequence-structure relationship Proc Natl Acad Sci USA 89 8721 8725
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 8721-8725
-
-
Leopold, P.E.1
Montal, M.2
Onuchic, J.N.3
-
13
-
-
0015597839
-
Nucleation, rapid folding, and globular intrachain regions in proteins
-
DB Wetlaufer 1973 Nucleation, rapid folding, and globular intrachain regions in proteins Proc Natl Acad Sci USA 70 697 701
-
(1973)
Proc Natl Acad Sci USA
, vol.70
, pp. 697-701
-
-
Wetlaufer, D.B.1
-
14
-
-
47749083052
-
From the first protein structures to our current knowledge of protein folding: Delights and scepticisms
-
AR Fersht 2008 From the first protein structures to our current knowledge of protein folding: delights and scepticisms Nat Rev Mol Cell Biol 9 650 654
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 650-654
-
-
Fersht, A.R.1
-
15
-
-
0029160445
-
How the molten globule became
-
OB Ptitsyn 1995 How the molten globule became Trends Biochem Sci 20 376 379
-
(1995)
Trends Biochem Sci
, vol.20
, pp. 376-379
-
-
Ptitsyn, O.B.1
-
16
-
-
0020024242
-
Specific intermediates in the folding reactions of small proteins and the mechanism of protein folding
-
PS Kim RL Baldwin 1982 Specific intermediates in the folding reactions of small proteins and the mechanism of protein folding Annu Rev Biochem 51 459 489
-
(1982)
Annu Rev Biochem
, vol.51
, pp. 459-489
-
-
Kim, P.S.1
Baldwin, R.L.2
-
17
-
-
0028327236
-
Protein folding dynamics: The diffusion-collision model and experimental data
-
M Karplus DL Weaver 1994 Protein folding dynamics: the diffusion-collision model and experimental data Protein Sci 3 650 668 (Pubitemid 24136370)
-
(1994)
Protein Science
, vol.3
, Issue.4
, pp. 650-668
-
-
Karplus, M.1
Weaver, D.L.2
-
18
-
-
0029886627
-
How molten is the molten globule?
-
DOI 10.1038/nsb0696-488
-
O Ptitsyn 1996 How molten is the molten globule? Nat Struct Biol 3 488 490 (Pubitemid 26174694)
-
(1996)
Nature Structural Biology
, vol.3
, Issue.6
, pp. 488-490
-
-
Ptitsyn, O.1
-
19
-
-
0028856785
-
Optimization of rates of protein folding: The nucleation-condensation mechanism and its implications
-
AR Fersht 1995 Optimization of rates of protein folding: the nucleation-condensation mechanism and its implications Proc Natl Acad Sci USA 92 10869 10873
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 10869-10873
-
-
Fersht, A.R.1
-
20
-
-
0031043161
-
Nucleation mechanisms in protein folding
-
DOI 10.1016/S0959-440X(97)80002-4
-
AR Fersht 1997 Nucleation mechanisms in protein folding Curr Opin Struct Biol 7 3 9 (Pubitemid 27092374)
-
(1997)
Current Opinion in Structural Biology
, vol.7
, Issue.1
, pp. 3-9
-
-
Fersht, A.R.1
-
21
-
-
0345255608
-
Unifying features in protein-folding mechanisms
-
DOI 10.1073/pnas.1835776100
-
S Gianni NR Guydosh F Khan TD Caldas U Mayor GW White ML DeMarco V Daggett AR Fersht 2003 Unifying features in protein-folding mechanisms Proc Natl Acad Sci USA 100 13286 13291 (Pubitemid 37444734)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.23
, pp. 13286-13291
-
-
Gianni, S.1
Guydosh, N.R.2
Khan, F.3
Caldas, T.D.4
Mayor, U.5
White, G.W.N.6
DeMarco, M.L.7
Daggett, V.8
Fersht, A.R.9
-
22
-
-
0035919635
-
Persistence of native-like topology in a denatured protein in 8 M urea
-
DOI 10.1126/science.1060438
-
D Shortle MS Ackerman 2001 Persistence of native-like topology in a denatured protein in 8 M urea Science 293 487 489 (Pubitemid 32679075)
-
(2001)
Science
, vol.293
, Issue.5529
, pp. 487-489
-
-
Shortle, D.1
Ackerman, M.S.2
-
23
-
-
0026511656
-
The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding
-
AR Fersht A Matouschek L Serrano 1992 The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding J Mol Biol 224 771 782
-
(1992)
J Mol Biol
, vol.224
, pp. 771-782
-
-
Fersht, A.R.1
Matouschek, A.2
Serrano, L.3
-
25
-
-
16244419001
-
Elucidation of the protein folding landscape by NMR
-
DOI 10.1016/S0076-6879(05)94011-1, Nuclear Magnetic Resonance of Biological Macromolecules
-
HJ Dyson PE Wright 2005 Elucidation of the protein folding landscape by NMR Methods Enzymol 394 299 321 (Pubitemid 40460920)
-
(2005)
Methods in Enzymology
, vol.394
, pp. 299-321
-
-
Dyson, H.J.1
Wright, P.E.2
-
26
-
-
4344707281
-
Unfolded proteins and protein folding studied by NMR
-
HJ Dyson PE Wright 2004 Unfolded proteins and protein folding studied by NMR Chem Rev 104 3607 3622
-
(2004)
Chem Rev
, vol.104
, pp. 3607-3622
-
-
Dyson, H.J.1
Wright, P.E.2
-
28
-
-
33846940059
-
Mechanical unfolding of proteins: insights into biology, structure and folding
-
DOI 10.1016/j.sbi.2007.01.006, PII S0959440X07000073, Foldinf and Binding / Protein-Nucleic Interactions
-
JR Forman J Clarke 2007 Mechanical unfolding of proteins: insights into biology, structure and folding Curr Opin Struct Biol 17 58 66 (Pubitemid 46240817)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.1
, pp. 58-66
-
-
Forman, J.R.1
Clarke, J.2
-
30
-
-
39149104002
-
Combining experiment and simulation in protein folding: Closing the gap for small model systems
-
RD Schaeffer A Fersht V Daggett 2008 Combining experiment and simulation in protein folding: closing the gap for small model systems Curr Opin Struct Biol 18 4 9
-
(2008)
Curr Opin Struct Biol
, vol.18
, pp. 4-9
-
-
Schaeffer, R.D.1
Fersht, A.2
Daggett, V.3
-
31
-
-
32344442405
-
Studies of folding and misfolding using simplified models
-
DOI 10.1016/j.sbi.2006.01.001, PII S0959440X06000030
-
NV Dokholyan 2006 Studies of folding and misfolding using simplified models Curr Opin Struct Biol 16 79 85 (Pubitemid 43221875)
-
(2006)
Current Opinion in Structural Biology
, vol.16
, Issue.1
, pp. 79-85
-
-
Dokholyan, N.V.1
-
32
-
-
32344450229
-
Network and graph analyses of folding free energy surfaces
-
DOI 10.1016/j.sbi.2006.01.002, PII S0959440X06000029
-
A Caflisch 2006 Network and graph analyses of folding free energy surfaces Curr Opin Struct Biol 16 71 78 (Pubitemid 43221874)
-
(2006)
Current Opinion in Structural Biology
, vol.16
, Issue.1
, pp. 71-78
-
-
Caflisch, A.1
-
34
-
-
33846901901
-
Intermediates: ubiquitous species on folding energy landscapes?
-
DOI 10.1016/j.sbi.2007.01.003, PII S0959440X07000048, Foldinf and Binding / Protein-Nucleic Interactions
-
DJ Brockwell SE Radford 2007 Intermediates: ubiquitous species on folding energy landscapes? Curr Opin Struct Biol 17 30 37 (Pubitemid 46240814)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.1
, pp. 30-37
-
-
Brockwell, D.J.1
Radford, S.E.2
-
36
-
-
0037225280
-
Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding
-
DOI 10.1016/S0022-2836(02)01230-5
-
IE Sanchez T Kiefhaber 2003 Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding J Mol Biol 325 367 376 (Pubitemid 36062694)
-
(2003)
Journal of Molecular Biology
, vol.325
, Issue.2
, pp. 367-376
-
-
Sanchez, I.E.1
Kiefhaber, T.2
-
37
-
-
33846115692
-
A PDZ domain recapitulates a unifying mechanism for protein folding
-
DOI 10.1073/pnas.0602770104
-
S Gianni CD Geierhaas N Calosci P Jemth GW Vuister C Travaglini- Allocatelli M Vendruscolo M Brunori 2007 A PDZ domain recapitulates a unifying mechanism for protein folding Proc Natl Acad Sci USA 104 128 133 (Pubitemid 46067996)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.1
, pp. 128-133
-
-
Gianni, S.1
Geierhaas, C.D.2
Calosci, N.3
Jemth, P.4
Vuister, G.W.5
Travaglini-Allocatelli, C.6
Vendruscolo, M.7
Brunori, M.8
-
38
-
-
13844299144
-
The family feud: Do proteins with similar structures fold via the same pathway?
-
DOI 10.1016/j.sbi.2005.01.011
-
A Zarrine-Afsar SM Larson AR Davidson 2005 The family feud: do proteins with similar structures fold via the same pathway? Curr Opin Struct Biol 15 42 49 (Pubitemid 40249508)
-
(2005)
Current Opinion in Structural Biology
, vol.15
, Issue.SPEC. ISS.
, pp. 42-49
-
-
Zarrine-Afsar, A.1
Larson, S.M.2
Davidson, A.R.3
-
39
-
-
33846916730
-
Malleability of protein folding pathways: a simple reason for complex behaviour
-
DOI 10.1016/j.sbi.2007.01.008, PII S0959440X07000097, Foldinf and Binding / Protein-Nucleic Interactions
-
MO Lindberg M Oliveberg 2007 Malleability of protein folding pathways: a simple reason for complex behaviour Curr Opin Struct Biol 17 21 29 (Pubitemid 46240818)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.1
, pp. 21-29
-
-
Lindberg, M.O.1
Oliveberg, M.2
-
40
-
-
0037221599
-
Is there a unifying mechanism for protein folding?
-
DOI 10.1016/S0968-0004(02)00012-9, PII S0968000402000129
-
V Daggett AR Fersht 2003 Is there a unifying mechanism for protein folding? Trends Biochem Sci 28 18 25 (Pubitemid 36051002)
-
(2003)
Trends in Biochemical Sciences
, vol.28
, Issue.1
, pp. 18-25
-
-
Daggett, V.1
Fersht, A.R.2
-
41
-
-
42449151176
-
Protein folding and misfolding: Mechanism and principles
-
DOI 10.1017/S0033583508004654, PII S0033583508004654
-
SW Englander L Mayne MM Krishna 2007 Protein folding and misfolding: mechanism and principles Q Rev Biophys 40 287 326 (Pubitemid 351569384)
-
(2007)
Quarterly Reviews of Biophysics
, vol.40
, Issue.4
, pp. 287-326
-
-
Englander, S.W.1
Mayne, L.2
Krishna, M.M.G.3
-
42
-
-
0025370815
-
Dominant forces in protein folding
-
DOI 10.1021/bi00483a001
-
KA Dill 1990 Dominant forces in protein folding Biochemistry 29 7133 7155 (Pubitemid 20230041)
-
(1990)
Biochemistry
, vol.29
, Issue.31
, pp. 7133-7155
-
-
Dill, K.A.1
-
43
-
-
33846104376
-
All-Atom Ab Initio Folding of a Diverse Set of Proteins
-
DOI 10.1016/j.str.2006.11.010, PII S0969212606004746
-
JS Yang WW Chen J Skolnick EI Shakhnovich 2007 All-atom ab initio folding of a diverse set of proteins Structure 15 53 63 (Pubitemid 46073772)
-
(2007)
Structure
, vol.15
, Issue.1
, pp. 53-63
-
-
Yang, J.S.1
Chen, W.W.2
Skolnick, J.3
Shakhnovich, E.I.4
-
44
-
-
33745122980
-
Electrostatic Interactions in the Denatured State and in the Transition State for Protein Folding: Effects of Denatured State Interactions on the Analysis of Transition State Structure
-
DOI 10.1016/j.jmb.2006.04.038, PII S0022283606005122
-
JH Cho DP Raleigh 2006 Electrostatic interactions in the denatured state and in the transition state for protein folding: effects of denatured state interactions on the analysis of transition state structure J Mol Biol 359 1437 1446 (Pubitemid 43903498)
-
(2006)
Journal of Molecular Biology
, vol.359
, Issue.5
, pp. 1437-1446
-
-
Cho, J.-H.1
Raleigh, D.P.2
-
45
-
-
0000648204
-
On the structure of native, denatured, and coagulated proteins
-
AE Mirsky L Pauling 1936 On the structure of native, denatured, and coagulated proteins Proc Natl Acad Sci USA 22 439 447
-
(1936)
Proc Natl Acad Sci USA
, vol.22
, pp. 439-447
-
-
Mirsky, A.E.1
Pauling, L.2
-
46
-
-
0035909809
-
Packing is a key selection factor in the evolution of protein hydrophobic cores
-
DOI 10.1021/bi011776v
-
J Chen WE Stites 2001 Packing is a key selection factor in the evolution of protein hydrophobic cores Biochemistry 40 15280 15289 (Pubitemid 33151942)
-
(2001)
Biochemistry
, vol.40
, Issue.50
, pp. 15280-15289
-
-
Chen, J.1
Stites, W.E.2
-
47
-
-
0027815614
-
An analysis of packing in the protein folding problem
-
FM Richards WA Lim 1993 An analysis of packing in the protein folding problem Q Rev Biophys 26 423 498
-
(1993)
Q Rev Biophys
, vol.26
, pp. 423-498
-
-
Richards, F.M.1
Lim, W.A.2
-
48
-
-
51649118422
-
Folding at the rhythm of the rare codon beat
-
M Marin 2008 Folding at the rhythm of the rare codon beat Biotechnol J 3 1047 1057
-
(2008)
Biotechnol J
, vol.3
, pp. 1047-1057
-
-
Marin, M.1
-
50
-
-
0026682931
-
Solution conformations and aggregational properties of synthetic amyloid beta-peptides of Alzheimer's disease. Analysis of circular dichroism spectra
-
CJ Barrow A Yasuda PT Kenny MG Zagorski 1992 Solution conformations and aggregational properties of synthetic amyloid beta-peptides of Alzheimer's disease. Analysis of circular dichroism spectra J Mol Biol 225 1075 1093
-
(1992)
J Mol Biol
, vol.225
, pp. 1075-1093
-
-
Barrow, C.J.1
Yasuda, A.2
Kenny, P.T.3
Zagorski, M.G.4
-
51
-
-
0001383980
-
Regeneration of enzyme activity by air oxidation of reduced subtilisin-modified ribonuclease
-
E Haber CB Anfinsen 1961 Regeneration of enzyme activity by air oxidation of reduced subtilisin-modified ribonuclease J Biol Chem 236 422 424
-
(1961)
J Biol Chem
, vol.236
, pp. 422-424
-
-
Haber, E.1
Anfinsen, C.B.2
-
52
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
DOI 10.1038/35057062
-
ES Lander LM Linton B Birren C Nusbaum MC Zody J Baldwin K Devon K Dewar M Doyle W FitzHugh R Funke D Gage K Harris A Heaford J Howland L Kann J Lehoczky R LeVine P [tmp] McEwan K [tmp] McKernan J Meldrim JP Mesirov C Miranda W Morris J Naylor C Raymond M Rosetti R Santos A Sheridan C Sougnez N Stange-Thomann N Stojanovic A Subramanian D Wyman J Rogers J Sulston R Ainscough S Beck D Bentley J Burton C Clee N Carter A Coulson R Deadman P Deloukas A Dunham I Dunham R Durbin L French D Grafham S Gregory T Hubbard S Humphray A Hunt M Jones C Lloyd A [tmp] McMurray L Matthews S Mercer S Milne JC Mullikin A Mungall R Plumb M Ross R Shownkeen S Sims RH Waterston RK Wilson LW Hillier JD [tmp] McPherson MA Marra ER Mardis LA Fulton AT Chinwalla KH Pepin WR Gish SL Chissoe MC Wendl KD Delehaunty TL Miner A Delehaunty JB Kramer LL Cook RS Fulton DL Johnson PJ Minx SW Clifton T Hawkins E Branscomb P Predki P Richardson S Wenning T Slezak N Doggett JF Cheng A Olsen S Lucas C Elkin E Uberbacher M Frazier RA Gibbs DM Muzny SE Scherer JB Bouck EJ Sodergren KC Worley CM Rives JH Gorrell ML Metzker SL Naylor RS Kucherlapati DL Nelson GM Weinstock Y Sakaki A Fujiyama M Hattori T Yada A Toyoda T Itoh C Kawagoe H Watanabe Y Totoki T Taylor J Weissenbach R Heilig W Saurin F Artiguenave P Brottier T Bruls E Pelletier C Robert P Wincker DR Smith L Doucette-Stamm M Rubenfield K Weinstock HM Lee J Dubois A Rosenthal M Platzer G Nyakatura S Taudien A Rump H Yang J Yu J Wang G Huang J Gu L Hood L Rowen A Madan S Qin RW Davis NA Federspiel AP Abola MJ Proctor RM Myers J Schmutz M Dickson J Grimwood DR Cox MV Olson R Kaul C Raymond N Shimizu K Kawasaki S Minoshima GA Evans M Athanasiou R Schultz BA Roe F Chen H Pan J Ramser H Lehrach R Reinhardt WR [tmp] McCombie M de la Bastide N Dedhia H Blocker K Hornischer G Nordsiek R Agarwala L Aravind JA Bailey A Bateman S Batzoglou E Birney P Bork DG Brown CB Burge L Cerutti HC Chen D Church M Clamp RR Copley T Doerks SR Eddy EE Eichler TS Furey J Galagan JG Gilbert C Harmon Y Hayashizaki D Haussler H Hermjakob K Hokamp W Jang LS Johnson TA Jones S Kasif A Kaspryzk S Kennedy WJ Kent P Kitts EV Koonin I Korf D Kulp D Lancet TM Lowe A [tmp] McLysaght T Mikkelsen JV Moran N Mulder VJ Pollara CP Ponting G Schuler J Schultz G Slater AF Smit E Stupka J Szustakowski D Thierry-Mieg J Thierry-Mieg L Wagner J Wallis R Wheeler A Williams YI Wolf KH Wolfe SP Yang RF Yeh F Collins MS Guyer J Peterson A Felsenfeld KA Wetterstrand A Patrinos MJ Morgan P de Jong JJ Catanese K Osoegawa H Shizuya S Choi YJ Chen 2001 Initial sequencing and analysis of the human genome Nature 409 860 921 (Pubitemid 32165345)
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
Funke, R.11
Gage, D.12
Harris, K.13
Heaford, A.14
Howland, J.15
Kann, L.16
Lehoczky, J.17
Levine, R.18
McEwan, P.19
McKernan, K.20
Meldrim, J.21
Mesirov, J.P.22
Miranda, C.23
Morris, W.24
Naylor, J.25
Raymond, C.26
Rosetti, M.27
Santos, R.28
Sheridan, A.29
Sougnez, C.30
Stange-Thomann, N.31
Stojanovic, N.32
Subramanian, A.33
Wyman, D.34
Rogers, J.35
Sulston, J.36
Ainscough, R.37
Beck, S.38
Bentley, D.39
Burton, J.40
Clee, C.41
Carter, N.42
Coulson, A.43
Deadman, R.44
Deloukas, P.45
Dunham, A.46
Dunham, I.47
Durbin, R.48
French, L.49
Grafham, D.50
Gregory, S.51
Hubbard, T.52
Humphray, S.53
Hunt, A.54
Jones, M.55
Lloyd, C.56
McMurray, A.57
Matthews, L.58
Mercer, S.59
Milne, S.60
Mullikin, J.C.61
Mungall, A.62
Plumb, R.63
Ross, M.64
Shownkeen, R.65
Sims, S.66
Waterston, R.H.67
Wilson, R.K.68
Hillier, L.W.69
McPherson, J.D.70
Marra, M.A.71
Mardis, E.R.72
Fulton, L.A.73
Chinwalla, A.T.74
Pepin, K.H.75
Gish, W.R.76
Chissoe, S.L.77
Wendl, M.C.78
more..
-
54
-
-
0028174310
-
How does a protein fold?
-
DOI 10.1038/369248a0
-
A Sali E Shakhnovich M Karplus 1994 How does a protein fold? Nature 369 248 251 (Pubitemid 24154805)
-
(1994)
Nature
, vol.369
, Issue.6477
, pp. 248-251
-
-
Sali, A.1
Shakhnovich, E.2
Karplus, M.3
-
55
-
-
0030959998
-
The 'Asx-Pro turn' as a local structural motif stabilized by alternative patterns of hydrogen bonds and a consensus-derived model of the sequence Asn-Pro-Asn
-
DR Wilson BB Finlay 1997 The 'Asx-Pro turn' as a local structural motif stabilized by alternative patterns of hydrogen bonds and a consensus-derived model of the sequence Asn-Pro-Asn Protein Eng 10 519 529 (Pubitemid 27246316)
-
(1997)
Protein Engineering
, vol.10
, Issue.5
, pp. 519-529
-
-
Wilson, D.R.1
Finlay, B.B.2
-
56
-
-
76549252207
-
The structure of proteins; Two hydrogen-bonded helical configurations of the polypeptide chain
-
L Pauling RB Corey HR Branson 1951 The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain Proc Natl Acad Sci USA 37 205 211
-
(1951)
Proc Natl Acad Sci USA
, vol.37
, pp. 205-211
-
-
Pauling, L.1
Corey, R.B.2
Branson, H.R.3
-
57
-
-
0017466433
-
Preferential and absolute adsorption to poly[N5-(3-hydroxypropyl)-L- glutamine] in water/2-chloroethanol solvent mixtures
-
C Feyereisen M Morcellet C Loucheux 1977 Preferential and absolute adsorption to poly[N5-(3-hydroxypropyl)-L-glutamine] in water/2-chloroethanol solvent mixtures Macromolecules 10 485 488
-
(1977)
Macromolecules
, vol.10
, pp. 485-488
-
-
Feyereisen, C.1
Morcellet, M.2
Loucheux, C.3
-
58
-
-
0014062165
-
Use of helical wheels to represent the structures of proteins and to identify segments with helical potential
-
M Schiffer AB Edmundson 1967 Use of helical wheels to represent the structures of proteins and to identify segments with helical potential Biophys J 7 121 135
-
(1967)
Biophys J
, vol.7
, pp. 121-135
-
-
Schiffer, M.1
Edmundson, A.B.2
-
59
-
-
0014452368
-
The influence of short-range interactions on protein onformation. II. A model for predicting the alpha-helical regions of proteins
-
D Kotelchuck HA Scheraga 1969 The influence of short-range interactions on protein onformation. II. A model for predicting the alpha-helical regions of proteins Proc Natl Acad Sci USA 62 14 21
-
(1969)
Proc Natl Acad Sci USA
, vol.62
, pp. 14-21
-
-
Kotelchuck, D.1
Scheraga, H.A.2
-
62
-
-
0025804130
-
Large differences in the helix propensities of alanine and glycine
-
A Chakrabartty JA Schellman RL Baldwin 1991 Large differences in the helix propensities of alanine and glycine Nature 351 586 588 (Pubitemid 21896647)
-
(1991)
Nature
, vol.351
, Issue.6327
, pp. 586-588
-
-
Chakrabartty, A.1
Schellman, J.A.2
Baldwin, R.L.3
-
63
-
-
0025082921
-
Helix-coil stability constants for the naturally occurring amino acids in water. XXIII. Proline parameters from random poly(hydroxybutylglutamine-co-L- proline
-
DOI 10.1002/bip.360300112
-
KH Altmann J Wojcik M Vasquez HA Scheraga 1990 Helix-coil stability constants for the naturally occurring amino acids in water. XXIII. Proline parameters from random poly (hydroxybutylglutamine-co-L-proline) Biopolymers 30 107 120 (Pubitemid 20263096)
-
(1990)
Biopolymers
, vol.30
, Issue.1-2
, pp. 107-120
-
-
Altmann, K.-H.1
Wojcik, J.2
Vasquez, M.3
Scheraga, H.A.4
-
65
-
-
0021281005
-
A helix stop signal in the isolated S-peptide of ribonuclease A
-
PS Kim RL Baldwin 1984 A helix stop signal in the isolated S-peptide of ribonuclease A Nature 307 329 334 (Pubitemid 14134059)
-
(1984)
Nature
, vol.307
, Issue.5949
, pp. 329-334
-
-
Kim, P.S.1
Baldwin, R.L.2
-
66
-
-
0023461350
-
Helix stabilization by Glu-•••Lys + salt bridges in short peptides of de novo design
-
S Marqusee RL Baldwin 1987 Helix stabilization by Glu- •••Lys + salt bridges in short peptides of de novo design Proc Natl Acad Sci USA 84 8898 8902
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 8898-8902
-
-
Marqusee, S.1
Baldwin, R.L.2
-
67
-
-
0024505733
-
Comparison of α-helix stability in peptides having a negatively or positively charged residue block attached either to the N- or C-terminus of an α-helix: The electrostatic contribution and anisotropic stability of the α-helix
-
DOI 10.1002/bip.360280507
-
S Takahashi EH Kim T Hibino T Ooi 1989 Comparison of alpha-helix stability in peptides having a negatively or positively charged residue block attached either to the N- or C-terminus of an alpha-helix: the electrostatic contribution and anisotropic stability of the alpha-helix Biopolymers 28 995 1009 (Pubitemid 19105217)
-
(1989)
Biopolymers
, vol.28
, Issue.5
, pp. 995-1009
-
-
Takahashi, S.1
Kim, E.-H.2
Hibino, T.3
Ooi, T.4
-
68
-
-
0000668407
-
Theory of phase transition between helix and random coil in polypeptide chains
-
BH Zimm JK Brag 1959 Theory of phase transition between helix and random coil in polypeptide chains J Chem Phys 31 526
-
(1959)
J Chem Phys
, vol.31
, pp. 526
-
-
Zimm, B.H.1
Brag, J.K.2
-
69
-
-
0026058806
-
Physical reasons for secondary structure stability: Alpha-helices in short peptides
-
AV Finkelstein AY Badretdinov OB Ptitsyn 1991 Physical reasons for secondary structure stability: alpha-helices in short peptides Proteins 10 287 299
-
(1991)
Proteins
, vol.10
, pp. 287-299
-
-
Finkelstein, A.V.1
Badretdinov, A.Y.2
Ptitsyn, O.B.3
-
70
-
-
0028447768
-
Elucidating the folding problem of helical peptides using empirical parameters
-
V Munoz L Serrano 1994 Elucidating the folding problem of helical peptides using empirical parameters Nat Struct Biol 1 399 409
-
(1994)
Nat Struct Biol
, vol.1
, pp. 399-409
-
-
Munoz, V.1
Serrano, L.2
-
71
-
-
0028873081
-
Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides
-
V Munoz L Serrano 1995 Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides J Mol Biol 245 275 296
-
(1995)
J Mol Biol
, vol.245
, pp. 275-296
-
-
Munoz, V.1
Serrano, L.2
-
72
-
-
0028834210
-
Elucidating the folding problem of helical peptides using empirical parameters. III. Temperature and pH dependence
-
V Munoz L Serrano 1995 Elucidating the folding problem of helical peptides using empirical parameters. III. Temperature and pH dependence J Mol Biol 245 297 308
-
(1995)
J Mol Biol
, vol.245
, pp. 297-308
-
-
Munoz, V.1
Serrano, L.2
-
73
-
-
0001117058
-
Construction and design of β-sheets
-
C Smith L Regan 1997 Construction and design of β-sheets Acc Chem Res 30 153 161
-
(1997)
Acc Chem Res
, vol.30
, pp. 153-161
-
-
Smith, C.1
Regan, L.2
-
74
-
-
40849089197
-
A logical or redundancy within the Asx-Pro-Asx-Gly type i beta-turn motif
-
J Lee VK Dubey LM Longo M Blaber 2008 A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif J Mol Biol 377 1251 1264
-
(2008)
J Mol Biol
, vol.377
, pp. 1251-1264
-
-
Lee, J.1
Dubey, V.K.2
Longo, L.M.3
Blaber, M.4
-
75
-
-
0017868338
-
Empirical predictions of protein conformation
-
PY Chou GD Fasman 1978 Empirical predictions of protein conformation Annu Rev Biochem 47 251 276
-
(1978)
Annu Rev Biochem
, vol.47
, pp. 251-276
-
-
Chou, P.Y.1
Fasman, G.D.2
-
76
-
-
0035220932
-
The protein non-folding problem: Amino acid determinants of intrinsic order and disorder
-
Williams RM, Obradovi Z, Mathura V, Braun W, Garner EC, Young J, Takayama S, Brown CJ, Dunker AK (2001) The protein non-folding problem: amino acid determinants of intrinsic order and disorder. Pac Symp Biocomput 89-100
-
(2001)
Pac Symp Biocomput
, pp. 89-100
-
-
Williams, R.M.1
Obradovi, Z.2
Mathura, V.3
Braun, W.4
Garner, E.C.5
Young, J.6
Takayama, S.7
Brown, C.J.8
Dunker, A.K.9
-
77
-
-
0019497821
-
Design, synthesis and characterization of a cytotoxic peptide with melittin-like activity
-
DOI 10.1021/ja00393a035
-
W DeGrado F Kezdy E Kaiser 1981 Design, synthesis and characterization of a cytotoxic peptide with melittin-like activity J Am Chem Soc 103 679 681 (Pubitemid 11150660)
-
(1981)
Journal of the American Chemical Society
, vol.103
, Issue.3
, pp. 679-681
-
-
DeGrado, W.F.1
Kezdy, F.J.2
Kaiser, E.T.3
-
78
-
-
17444424974
-
The structure of alpha-helical coiled coils
-
AN Lupas M Gruber 2005 The structure of alpha-helical coiled coils Adv Protein Chem 70 37 78
-
(2005)
Adv Protein Chem
, vol.70
, pp. 37-78
-
-
Lupas, A.N.1
Gruber, M.2
-
80
-
-
0025890946
-
Influence of proline residues on protein conformation
-
MW [tmp] MacArthur JM Thornton 1991 Influence of proline residues on protein conformation J Mol Biol 218 397 412 (Pubitemid 121003355)
-
(1991)
Journal of Molecular Biology
, vol.218
, Issue.2
, pp. 397-412
-
-
MacArthur, M.W.1
Thornton, J.M.2
-
81
-
-
4143085058
-
Folding of helical membrane proteins: The role of polar, GxxxG-like and proline motifs
-
DOI 10.1016/j.sbi.2004.07.007, PII S0959440X04001149
-
A Senes DE Engel WF DeGrado 2004 Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs Curr Opin Struct Biol 14 465 479 (Pubitemid 39094354)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.4
, pp. 465-479
-
-
Senes, A.1
Engel, D.E.2
Degrado, W.F.3
-
82
-
-
0032509022
-
C-H. O hydrogen bond involving proline residues in alpha-helices
-
P Chakrabarti S Chakrabarti 1998 C-H. O hydrogen bond involving proline residues in alpha-helices J Mol Biol 284 867 873
-
(1998)
J Mol Biol
, vol.284
, pp. 867-873
-
-
Chakrabarti, P.1
Chakrabarti, S.2
-
84
-
-
0036381024
-
Molecular moulds with multiple missions: Functional sites in three-finger toxins
-
RM Kini 2002 Molecular moulds with multiple missions: functional sites in three-finger toxins Clin Exp Pharmacol Physiol 29 815 822
-
(2002)
Clin Exp Pharmacol Physiol
, vol.29
, pp. 815-822
-
-
Kini, R.M.1
-
85
-
-
0035793454
-
Disulfide bridge reorganization induced by proline mutations in maurotoxin
-
DOI 10.1016/S0014-5793(00)02433-9, PII S0014579300024339
-
E Carlier Z Fajloun P Mansuelle M Fathallah A Mosbah R Oughideni G Sandoz E Di Luccio S Geib I Regaya J Brocard H Rochat H Darbon C Devaux JM Sabatier M de Waard 2001 Disulfide bridge reorganization induced by proline mutations in maurotoxin FEBS Lett 489 202 207 (Pubitemid 32126409)
-
(2001)
FEBS Letters
, vol.489
, Issue.2-3
, pp. 202-207
-
-
Carlier, E.1
Fajloun, Z.2
Mansuelle, P.3
Fathallah, M.4
Mosbah, A.5
Oughideni, R.6
Sandoz, G.7
Di Luccio, E.8
Geib, S.9
Regaya, I.10
Brocard, J.11
Rochat, H.12
Darbon, H.13
Devaux, C.14
Sabatier, J.M.15
De Waard, M.16
-
87
-
-
0034671899
-
λ-conotoxins, a new family of conotoxins with unique disulfide pattern and protein folding: Isolation and characterization from the venom of Conus marmoreus
-
DOI 10.1074/jbc.M006354200
-
RA Balaji A Ohtake K Sato P Gopalakrishnakone RM Kini KT Seow BH Bay 2000 λ-Conotoxins, a new family of conotoxins with unique disulfide pattern and protein folding. Isolation and characterization from the venom of Conus marmoreus J Biol Chem 275 39516 39522 (Pubitemid 32058978)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.50
, pp. 39516-39522
-
-
Balaji, R.A.1
Ohtake, A.2
Sato, K.3
Gopalakrishnakone, P.4
Kini, R.M.5
Seow, K.T.6
Bay, B.-H.7
-
88
-
-
33947424873
-
Protein folding determinants: Structural features determining alternative disulfide pairing in α- and χ/λ-conotoxins
-
DOI 10.1021/bi061969o
-
TS Kang Z Radic TT Talley SD Jois P Taylor RM Kini 2007 Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins Biochemistry 46 3338 3355 (Pubitemid 46453728)
-
(2007)
Biochemistry
, vol.46
, Issue.11
, pp. 3338-3355
-
-
Kang, T.S.1
Radic, Z.2
Talley, T.T.3
Jois, S.D.S.4
Taylor, P.5
Kini, R.M.6
-
89
-
-
4444378844
-
Structural basis for the role in protein folding of conserved proline-rich regions in cytochromes P450
-
DOI 10.1016/j.taap.2003.11.030, PII S0041008X0400064X
-
B Kemper 2004 Structural basis for the role in protein folding of conserved proline-rich regions in cytochromes P450 Toxicol Appl Pharmacol 199 305 315 (Pubitemid 39208730)
-
(2004)
Toxicology and Applied Pharmacology
, vol.199
, Issue.3
, pp. 305-315
-
-
Kemper, B.1
-
91
-
-
33846799138
-
Essential Role of Proline Isomerization in Stefin B Tetramer Formation
-
DOI 10.1016/j.jmb.2006.12.025, PII S0022283606017013
-
S Jenko Kokalj G Guncar I Stern G Morgan S Rabzelj M Kenig RA Staniforth JP Waltho E Zerovnik D Turk 2007 Essential role of proline isomerization in stefin B tetramer formation J Mol Biol 366 1569 1579 (Pubitemid 46215609)
-
(2007)
Journal of Molecular Biology
, vol.366
, Issue.5
, pp. 1569-1579
-
-
Jenko Kokalj, S.1
Guncar, G.2
Stern, I.3
Morgan, G.4
Rabzelj, S.5
Kenig, M.6
Staniforth, R.A.7
Waltho, J.P.8
Zerovnik, E.9
Turk, D.10
-
92
-
-
0043123370
-
A proline switch controls folding and domain interactions in the gene-3-protein of the filamentous phage fd
-
DOI 10.1016/S0022-2836(03)00864-7
-
A Martin FX Schmid 2003 A proline switch controls folding and domain interactions in the gene-3-protein of the filamentous phage fd J Mol Biol 331 1131 1140 (Pubitemid 36969970)
-
(2003)
Journal of Molecular Biology
, vol.331
, Issue.5
, pp. 1131-1140
-
-
Martin, A.1
Schmid, F.X.2
-
94
-
-
0037046153
-
Identification of proline residues responsible for the slow folding kinetics in pectate lyase C by mutagenesis
-
DOI 10.1021/bi0115131
-
DE Kamen RW Woody 2002 Identification of proline residues responsible for the slow folding kinetics in pectate lyase C by mutagenesis Biochemistry 41 4724 4732 (Pubitemid 34275673)
-
(2002)
Biochemistry
, vol.41
, Issue.14
, pp. 4724-4732
-
-
Kamen, D.E.1
Woody, R.W.2
-
95
-
-
34548660854
-
Prolyl cis-trans isomerization as a molecular timer
-
DOI 10.1038/nchembio.2007.35, PII NCHEMBIO200735
-
KP Lu G Finn TH Lee LK Nicholson 2007 Prolyl cis-trans isomerization as a molecular timer Nat Chem Biol 3 619 629 (Pubitemid 47417709)
-
(2007)
Nature Chemical Biology
, vol.3
, Issue.10
, pp. 619-629
-
-
Lu, K.P.1
Finn, G.2
Lee, T.H.3
Nicholson, L.K.4
-
96
-
-
0024959451
-
Peptidyl-prolyl cis-trans isomerase is the cyclosporin A-binding protein cyclophilin
-
N Takahashi T Hayano M Suzuki 1989 Peptidyl-prolyl cis-trans isomerase is the cyclosporin A-binding protein cyclophilin Nature 337 473 475
-
(1989)
Nature
, vol.337
, pp. 473-475
-
-
Takahashi, N.1
Hayano, T.2
Suzuki, M.3
-
97
-
-
0024472603
-
A receptor for the immunosupressant FK506 is a cis-trans peptidyl-prolyl isomerase
-
DOI 10.1038/341758a0
-
MW Harding A Galat DE Uehling SL Schreiber 1989 A receptor for the immunosuppressant FK506 is a cis-trans peptidyl-prolyl isomerase Nature 341 758 760 (Pubitemid 19260893)
-
(1989)
Nature
, vol.341
, Issue.6244
, pp. 758-760
-
-
Harding, M.W.1
Galat, A.2
Uehling, D.E.3
Schreiber, S.L.4
-
98
-
-
0001079105
-
On the use of sequence homologies to predict protein structure: Identical pentapeptides can have completely different conformations
-
DOI 10.1073/pnas.81.4.1075
-
W Kabsch C Sander 1984 On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations Proc Natl Acad Sci USA 81 1075 1078 (Pubitemid 14168225)
-
(1984)
Proceedings of the National Academy of Sciences of the United States of America
, vol.81
, pp. 1075-1078
-
-
Kabsch, W.1
Sander, C.2
-
99
-
-
33746635140
-
Design of protein conformational switches
-
DOI 10.1016/j.sbi.2006.05.014, PII S0959440X06000984
-
XI Ambroggio B Kuhlman 2006 Design of protein conformational switches Curr Opin Struct Biol 16 525 530 (Pubitemid 44149060)
-
(2006)
Current Opinion in Structural Biology
, vol.16
, Issue.4
, pp. 525-530
-
-
Ambroggio, X.I.1
Kuhlman, B.2
-
100
-
-
0029058133
-
The importance of extended conformations and, in particular, the PII conformation for the molecular recognition of peptides
-
G Siligardi AF Drake 1995 The importance of extended conformations and, in particular, the PII conformation for the molecular recognition of peptides Biopolymers 37 281 292
-
(1995)
Biopolymers
, vol.37
, pp. 281-292
-
-
Siligardi, G.1
Drake, A.F.2
-
101
-
-
20344400382
-
The structure of 'unstructured' regions in peptides and proteins: Role of the polyproline II helix in protein folding and recognition
-
DOI 10.1002/bip.20227
-
A Rath AR Davidson CM Deber 2005 The structure of " unstructured" regions in peptides and proteins: role of the polyproline II helix in protein folding and recognition Biopolymers 80 179 185 (Pubitemid 40791050)
-
(2005)
Biopolymers - Peptide Science Section
, vol.80
, Issue.2-3
, pp. 179-185
-
-
Rath, A.1
Davidson, A.R.2
Deber, C.M.3
-
102
-
-
9144222610
-
Aromatic interactions in peptides: Impact on structure and function
-
DOI 10.1002/bip.20144
-
ML Waters 2004 Aromatic interactions in peptides: impact on structure and function Biopolymers 76 435 445 (Pubitemid 39540536)
-
(2004)
Biopolymers - Peptide Science Section
, vol.76
, Issue.5
, pp. 435-445
-
-
Waters, M.L.1
-
103
-
-
33750075165
-
Effects of lysine acetylation in a β-hairpin peptide: Comparison of an amide-π and a cation-π interaction
-
DOI 10.1021/ja0648460
-
RM Hughes ML Waters 2006 Effects of lysine acetylation in a beta-hairpin peptide: comparison of an amide-pi and a cation-pi interaction J Am Chem Soc 128 13586 13591 (Pubitemid 44583045)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.41
, pp. 13586-13591
-
-
Hughes, R.M.1
Waters, M.L.2
-
104
-
-
57049128788
-
Aromatic residues engineered into the beta-turn nucleation site of ubiquitin lead to a complex folding landscape, non-native side-chain interactions, and kinetic traps
-
AM Rea ER Simpson JK Meldrum HE Williams MS Searle 2008 Aromatic residues engineered into the beta-turn nucleation site of ubiquitin lead to a complex folding landscape, non-native side-chain interactions, and kinetic traps Biochemistry 47 12910 12922
-
(2008)
Biochemistry
, vol.47
, pp. 12910-12922
-
-
Rea, A.M.1
Simpson, E.R.2
Meldrum, J.K.3
Williams, H.E.4
Searle, M.S.5
-
105
-
-
52449105981
-
Rational design of a conformation-switchable Ca(2+)- and Tb(3+)-binding protein without the use of multiple coupled metal-binding sites
-
S Li W Yang AW Maniccia D Jr Barrow H Tjong HX Zhou JJ Yang 2008 Rational design of a conformation-switchable Ca(2+)- and Tb(3+)-binding protein without the use of multiple coupled metal-binding sites FEBS J 275 5048 5061
-
(2008)
FEBS J
, vol.275
, pp. 5048-5061
-
-
Li, S.1
Yang, W.2
Maniccia, A.W.3
Jr, B.D.4
Tjong, H.5
Zhou, H.X.6
Yang, J.J.7
-
106
-
-
45449091418
-
Amyloidogenesis of natively unfolded proteins
-
DOI 10.2174/156720508784533312
-
VN Uversky 2008 Amyloidogenesis of natively unfolded proteins Curr Alzheimer Res 5 260 287 (Pubitemid 351850211)
-
(2008)
Current Alzheimer Research
, vol.5
, Issue.3
, pp. 260-287
-
-
Uversky, V.N.1
-
107
-
-
2342569618
-
Conformational constraints for amyloid fibrillation: The importance of being unfolded
-
DOI 10.1016/j.bbapap.2003.12.008, PII S1570963904000020
-
VN Uversky AL Fink 2004 Conformational constraints for amyloid fibrillation: the importance of being unfolded Biochim Biophys Acta 1698 131 153 (Pubitemid 38591469)
-
(2004)
Biochimica et Biophysica Acta - Proteins and Proteomics
, vol.1698
, Issue.2
, pp. 131-153
-
-
Uversky, V.N.1
Fink, A.L.2
-
108
-
-
0036842559
-
Formation and transfer of disulphide bonds in living cells
-
DOI 10.1038/nrm954
-
CS Sevier CA Kaiser 2002 Formation and transfer of disulphide bonds in living cells Nat Rev Mol Cell Biol 3 836 847 (Pubitemid 35285274)
-
(2002)
Nature Reviews Molecular Cell Biology
, vol.3
, Issue.11
, pp. 836-847
-
-
Sevier, C.S.1
Kaiser, C.A.2
-
110
-
-
0034697986
-
What can disulfide bonds tell us about protein energetics, function and folding: Simulations and bioninformatics analysis
-
DOI 10.1006/jmbi.2000.3893
-
VI Abkevich EI Shakhnovich 2000 What can disulfide bonds tell us about protein energetics, function and folding: simulations and bioninformatics analysis J Mol Biol 300 975 985 (Pubitemid 30708185)
-
(2000)
Journal of Molecular Biology
, vol.300
, Issue.4
, pp. 975-985
-
-
Abkevich, V.I.1
Shakhnovich, E.I.2
-
111
-
-
17644395645
-
Thioredoxin and its related molecules: Update 2005
-
DOI 10.1089/ars.2005.7.823
-
H Nakamura 2005 Thioredoxin and its related molecules: update 2005 Antioxid Redox Signal 7 823 828 (Pubitemid 40563224)
-
(2005)
Antioxidants and Redox Signaling
, vol.7
, Issue.5-6
, pp. 823-828
-
-
Nakamura, H.1
-
112
-
-
33745161382
-
Allosteric disulfide bonds
-
DOI 10.1021/bi0603064
-
B Schmidt L Ho PJ Hogg 2006 Allosteric disulfide bonds Biochemistry 45 7429 7433 (Pubitemid 43894936)
-
(2006)
Biochemistry
, vol.45
, Issue.24
, pp. 7429-7433
-
-
Schmidt, B.1
Ho, L.2
Hogg, P.J.3
-
113
-
-
0034602924
-
The transition state in the folding-unfolding reaction of four species of three-disulfide variant of hen lysozyme: The role of each disulfide bridge
-
DOI 10.1006/jmbi.1999.3442
-
A Yokota K Izutani M Takai Y Kubo Y Noda Y Koumoto H Tachibana S Segawa 2000 The transition state in the folding-unfolding reaction of four species of three-disulfide variant of hen lysozyme: the role of each disulfide bridge J Mol Biol 295 1275 1288 (Pubitemid 30706782)
-
(2000)
Journal of Molecular Biology
, vol.295
, Issue.5
, pp. 1275-1288
-
-
Yokota, A.1
Izutani, K.2
Takai, M.3
Kubo, Y.4
Noda, Y.5
Koumoto, Y.6
Tachibana, H.7
Segawa, S.-I.8
-
114
-
-
0029278913
-
Protein folding. An unfolding story
-
TE Creighton 1995 Protein folding. An unfolding story Curr Biol 5 353 356
-
(1995)
Curr Biol
, vol.5
, pp. 353-356
-
-
Creighton, T.E.1
-
115
-
-
0027311222
-
Role of native disulfide bonds in the structure and activity of insulin- like growth factor 1: Genetic models of protein-folding intermediates
-
DOI 10.1021/bi00070a033
-
LO Narhi QX Hua T Arakawa GM Fox L Tsai R Rosenfeld P Holst JA Miller MA Weiss 1993 Role of native disulfide bonds in the structure and activity of insulin-like growth factor 1: genetic models of protein-folding intermediates Biochemistry 32 5214 5221 (Pubitemid 23162091)
-
(1993)
Biochemistry
, vol.32
, Issue.19
, pp. 5214-5221
-
-
Narhi, L.O.1
Hua, Q.-X.2
Arakawa, T.3
Fox, G.M.4
Tsai, L.5
Rosenfeld, R.6
Holst, P.7
Miller, J.A.8
Weiss, M.A.9
-
116
-
-
0019881763
-
Disulphide bridges in globular proteins
-
JM Thornton 1981 Disulphide bridges in globular proteins J Mol Biol 151 261 287
-
(1981)
J Mol Biol
, vol.151
, pp. 261-287
-
-
Thornton, J.M.1
-
117
-
-
36148978188
-
The in vitro oxidative folding of the insulin superfamily
-
ZY Guo ZS Qiao YM Feng 2008 The in vitro oxidative folding of the insulin superfamily Antioxid Redox Signal 10 127 139
-
(2008)
Antioxid Redox Signal
, vol.10
, pp. 127-139
-
-
Guo, Z.Y.1
Qiao, Z.S.2
Feng, Y.M.3
-
118
-
-
0034687669
-
Hierarchical protein 'Un-design': Insulin's intrachain disulfide bridge tethers a recognition α-helix
-
DOI 10.1021/bi001905s
-
MA Weiss QX Hua W Jia YC Chu RY Wang PG Katsoyannis 2000 Hierarchical protein "un-design": insulin's intrachain disulfide bridge tethers a recognition alpha-helix Biochemistry 39 15429 15440 (Pubitemid 32002769)
-
(2000)
Biochemistry
, vol.39
, Issue.50
, pp. 15429-15440
-
-
Weiss, M.A.1
Hua, Q.-X.2
Jia, W.3
Chu, Y.-C.4
Wang, R.-Y.5
Katsoyannis, P.G.6
-
119
-
-
1442356427
-
Role of disulfide bonds in the structure and activity of human insulin
-
SG Chang KD Choi SH Jang HC Shin 2003 Role of disulfide bonds in the structure and activity of human insulin Mol Cells 16 323 330
-
(2003)
Mol Cells
, vol.16
, pp. 323-330
-
-
Chang, S.G.1
Choi, K.D.2
Jang, S.H.3
Shin, H.C.4
-
120
-
-
33748785712
-
The folding nucleus of the insulin superfamily: A flexible peptide model foreshadows the native state
-
DOI 10.1074/jbc.M602616200
-
QX Hua JP Mayer W Jia J Zhang MA Weiss 2006 The folding nucleus of the insulin superfamily: a flexible peptide model foreshadows the native state J Biol Chem 281 28131 28142 (Pubitemid 44414527)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.38
, pp. 28131-28142
-
-
Hua, Q.-X.1
Mayer, J.P.2
Jia, W.3
Zhang, J.4
Weiss, M.A.5
-
121
-
-
0037167634
-
Role of disulfide bonds in folding and activity of leiurotoxin I: Just two disulfides suffice
-
DOI 10.1021/bi026136m
-
Q Zhu S Liang L Martin S Gasparini A Menez C Vita 2002 Role of disulfide bonds in folding and activity of leiurotoxin I: just two disulfides suffice Biochemistry 41 11488 11494 (Pubitemid 35050756)
-
(2002)
Biochemistry
, vol.41
, Issue.38
, pp. 11488-11494
-
-
Zhu, Q.1
Liang, S.2
Martin, L.3
Gasparini, S.4
Menez, A.5
Vita, C.6
-
122
-
-
0032477917
-
Consequence of the removal of evolutionary conserved disulfide bridges on the structure and function of charybdotoxin and evidence that particular cysteine spacings govern specific disulfide bond formation
-
DOI 10.1021/bi9721086
-
E Drakopoulou J Vizzavona J Neyton V Aniort F Bouet H Virelizier A Menez C Vita 1998 Consequence of the removal of evolutionary conserved disulfide bridges on the structure and function of charybdotoxin and evidence that particular cysteine spacings govern specific disulfide bond formation Biochemistry 37 1292 1301 (Pubitemid 28135716)
-
(1998)
Biochemistry
, vol.37
, Issue.5
, pp. 1292-1301
-
-
Drakopoulou, E.1
Vizzavona, J.2
Neyton, J.3
Aniort, V.4
Bouet, F.5
Virelizier, H.6
Menez, A.7
Vita, C.8
-
124
-
-
33846094025
-
The sequence determinant causing different folding behaviors of insulin and insulin-like growth factor-1
-
DOI 10.1021/bi0616798
-
QL Huang J Zhao YH Tang SQ Shao GJ Xu YM Feng 2007 The sequence determinant causing different folding behaviors of insulin and insulin-like growth factor-1 Biochemistry 46 218 224 (Pubitemid 46067750)
-
(2007)
Biochemistry
, vol.46
, Issue.1
, pp. 218-224
-
-
Huang, Q.-L.1
Zhao, J.2
Tang, Y.-H.3
Shao, S.-Q.4
Xu, G.-J.5
Feng, Y.-M.6
-
126
-
-
36148996891
-
Folding of conotoxins: Formation of the native disulfide bridges during chemical synthesis and biosynthesis of Conus peptides
-
DOI 10.1089/ars.2007.1856
-
G Bulaj BM Olivera 2008 Folding of conotoxins: formation of the native disulfide bridges during chemical synthesis and biosynthesis of Conus peptides Antioxid Redox Signal 10 141 155 (Pubitemid 350115989)
-
(2008)
Antioxidants and Redox Signaling
, vol.10
, Issue.1
, pp. 141-155
-
-
Bulaj, G.1
Olivera, B.M.2
-
128
-
-
0026348466
-
Factors governing selective formation of specific disulfides in synthetic variants of alpha-conotoxin
-
RM Zhang GH Snyder 1991 Factors governing selective formation of specific disulfides in synthetic variants of alpha-conotoxin Biochemistry 30 11343 11348
-
(1991)
Biochemistry
, vol.30
, pp. 11343-11348
-
-
Zhang, R.M.1
Snyder, G.H.2
-
129
-
-
0027155577
-
Engineered disulfide bonds as probes of the folding pathway of barnase: Increasing the stability of proteins against the rate of denaturation
-
J Clarke AR Fersht 1993 Engineered disulfide bonds as probes of the folding pathway of barnase: increasing the stability of proteins against the rate of denaturation Biochemistry 32 4322 4329 (Pubitemid 23137740)
-
(1993)
Biochemistry
, vol.32
, Issue.16
, pp. 4322-4329
-
-
Clarke, J.1
Fersht, A.R.2
-
130
-
-
33751112217
-
Oxidation inhibits amyloid fibril formation of transthyretin
-
DOI 10.1111/j.1742-4658.2006.05532.x
-
SD Maleknia N Reixach JN Buxbaum 2006 Oxidation inhibits amyloid fibril formation of transthyretin FEBS J 273 5400 5406 (Pubitemid 44772396)
-
(2006)
FEBS Journal
, vol.273
, Issue.23
, pp. 5400-5406
-
-
Maleknia, S.D.1
Reixach, N.2
Buxbaum, J.N.3
-
131
-
-
33644514666
-
Methionine oxidation of monomeric l repressor: The denatured state ensemble under nondenaturing conditions
-
DOI 10.1110/ps.051856406
-
P Chugha HJ Sage TG Oas 2006 Methionine oxidation of monomeric lambda repressor: the denatured state ensemble under nondenaturing conditions Protein Sci 15 533 542 (Pubitemid 43306247)
-
(2006)
Protein Science
, vol.15
, Issue.3
, pp. 533-542
-
-
Chugha, P.1
Sage, H.J.2
Oas, T.G.3
-
132
-
-
0031885987
-
Loss of conformational stability in calmodulin upon methionine oxidation
-
J Gao DH Yin Y Yao H Sun Z Qin C Schoneich TD Williams TC Squier 1998 Loss of conformational stability in calmodulin upon methionine oxidation Biophys J 74 1115 1134 (Pubitemid 28108526)
-
(1998)
Biophysical Journal
, vol.74
, Issue.3
, pp. 1115-1134
-
-
Gao, J.1
Yin, D.H.2
Yao, Y.3
Sun, H.4
Qin, Z.5
Schoneich, C.6
Williams, T.D.7
Squier, T.C.8
-
133
-
-
0142103898
-
NMR Structures Reveal How Oxidation Inactivates Thrombomodulin
-
DOI 10.1021/bi034646q
-
MJ Wood LA Becvar JH Prieto G Melacini EA Komives 2003 NMR structures reveal how oxidation inactivates thrombomodulin Biochemistry 42 11932 11942 (Pubitemid 37280643)
-
(2003)
Biochemistry
, vol.42
, Issue.41
, pp. 11932-11942
-
-
Wood, M.J.1
Becvar, L.A.2
Prieto, J.H.3
Melacini, G.4
Komives, E.A.5
-
134
-
-
0027812284
-
Redox control of secondary structure in a designed peptide
-
GP Dado SH Gellman 1993 Redox control of secondary structure in a designed peptide J Am Chem Soc 115 12609 12610
-
(1993)
J Am Chem Soc
, vol.115
, pp. 12609-12610
-
-
Dado, G.P.1
Gellman, S.H.2
-
135
-
-
19544380240
-
Protein glycosylation: New challenges and opportunities
-
CH Wong 2005 Protein glycosylation: new challenges and opportunities J Org Chem 70 4219 4225
-
(2005)
J Org Chem
, vol.70
, pp. 4219-4225
-
-
Wong, C.H.1
-
136
-
-
3943059566
-
Roles of N-linked glycans in the endoplasmic reticulum
-
DOI 10.1146/annurev.biochem.73.011303.073752
-
A Helenius M Aebi 2004 Roles of N-linked glycans in the endoplasmic reticulum Annu Rev Biochem 73 1019 1049 (Pubitemid 39050393)
-
(2004)
Annual Review of Biochemistry
, vol.73
, pp. 1019-1049
-
-
Helenius, A.1
Aebi, M.2
-
137
-
-
0022572229
-
Trafficking of lysosomal enzymes in normal and disease states
-
S Kornfeld 1986 Trafficking of lysosomal enzymes in normal and disease states J Clin Invest 77 1 6 (Pubitemid 16101192)
-
(1986)
Journal of Clinical Investigation
, vol.77
, Issue.1
, pp. 1-6
-
-
Kornfeld, S.1
-
138
-
-
67449119292
-
Effects of glycosylation on the stability of protein pharmaceuticals
-
RJ Sola K Griebenow 2009 Effects of glycosylation on the stability of protein pharmaceuticals J Pharm Sci 98 1223 1245
-
(2009)
J Pharm Sci
, vol.98
, pp. 1223-1245
-
-
Sola, R.J.1
Griebenow, K.2
-
139
-
-
25444435396
-
Glycoengineering: The effect of glycosylation on the properties of therapeutic proteins
-
DOI 10.1002/jps.20319
-
AM Sinclair S Elliott 2005 Glycoengineering: the effect of glycosylation on the properties of therapeutic proteins J Pharm Sci 94 1626 1635 (Pubitemid 41360859)
-
(2005)
Journal of Pharmaceutical Sciences
, vol.94
, Issue.8
, pp. 1626-1635
-
-
Sinclair, A.M.1
Elliott, S.2
-
140
-
-
0027179238
-
Human acid beta-glucosidase. N-glycosylation site occupancy and the effect of glycosylation on enzymatic activity
-
A Berg-Fussman ME Grace Y Ioannou GA Grabowski 1993 Human acid beta-glucosidase. N-glycosylation site occupancy and the effect of glycosylation on enzymatic activity J Biol Chem 268 14861 14866
-
(1993)
J Biol Chem
, vol.268
, pp. 14861-14866
-
-
Berg-Fussman, A.1
Grace, M.E.2
Ioannou, Y.3
Grabowski, G.A.4
-
142
-
-
0031079605
-
IDS transfer from overexpressing cells to IDS-deficient cells
-
DOI 10.1006/excr.1996.3435
-
G Millat R Froissart I Maire D Bozon 1997 IDS transfer from overexpressing cells to IDS-deficient cells Exp Cell Res 230 362 367 (Pubitemid 27190656)
-
(1997)
Experimental Cell Research
, vol.230
, Issue.2
, pp. 362-367
-
-
Millat, G.1
Froissart, R.2
Maire, I.3
Bozon, D.4
-
144
-
-
0030954670
-
Carbohydrate structures of recombinant human α-L-iduronidase secreted by Chinese hamster ovary cells
-
DOI 10.1074/jbc.272.36.22758
-
KW Zhao KF Faull ED Kakkis EF Neufeld 1997 Carbohydrate structures of recombinant human alpha-L-iduronidase secreted by Chinese hamster ovary cells J Biol Chem 272 22758 22765 (Pubitemid 27386094)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.36
, pp. 22758-22765
-
-
Zhao, K.-W.1
Faull, K.F.2
Kakkis, E.D.3
Neufeld, E.F.4
-
146
-
-
0030220095
-
The structural role of sugars in glycoproteins
-
DOI 10.1016/S0958-1669(96)80116-9
-
DF Wyss G Wagner 1996 The structural role of sugars in glycoproteins Curr Opin Biotechnol 7 409 416 (Pubitemid 26265621)
-
(1996)
Current Opinion in Biotechnology
, vol.7
, Issue.4
, pp. 409-416
-
-
Wyss, D.F.1
Wagner, G.2
-
147
-
-
0033566020
-
Glycoproteins: Glycan presentation and protein-fold stability
-
MR Wormald RA Dwek 1999 Glycoproteins: glycan presentation and protein-fold stability Structure 7 R155 R160
-
(1999)
Structure
, vol.7
-
-
Wormald, M.R.1
Dwek, R.A.2
-
148
-
-
0025369545
-
2-glycoprotein I. Implications for the biosynthesis and folding of glycoproteins
-
DOI 10.1021/bi00478a020
-
MT Walsh H Watzlawick FW Putnam K Schmid R Brossmer 1990 Effect of the carbohydrate moiety on the secondary structure of beta 2-glycoprotein. I. Implications for the biosynthesis and folding of glycoproteins Biochemistry 29 6250 6257 (Pubitemid 20222242)
-
(1990)
Biochemistry
, vol.29
, Issue.26
, pp. 6250-6257
-
-
Walsh, M.T.1
Watzlawick, H.2
Putnam, F.W.3
Schmid, K.4
Brossmer, R.5
-
149
-
-
0029133626
-
Conformation and function of the N-linked glycan in the adhesion domain of human CD2
-
DF Wyss JS Choi J Li MH Knoppers KJ Willis AR Arulanandam A Smolyar EL Reinherz G Wagner 1995 Conformation and function of the N-linked glycan in the adhesion domain of human CD2 Science 269 1273 1278
-
(1995)
Science
, vol.269
, pp. 1273-1278
-
-
Wyss, D.F.1
Choi, J.S.2
Li, J.3
Knoppers, M.H.4
Willis, K.J.5
Arulanandam, A.R.6
Smolyar, A.7
Reinherz, E.L.8
Wagner, G.9
-
150
-
-
0030267033
-
Modulation of protein structure and function by asparagine-linked glycosylation
-
SE O'Connor B Imperiali 1996 Modulation of protein structure and function by asparagine-linked glycosylation Chem Biol 3 803 812 (Pubitemid 27005735)
-
(1996)
Chemistry and Biology
, vol.3
, Issue.10
, pp. 803-812
-
-
O'Connor, S.E.1
Imperiali, B.2
-
151
-
-
0029410691
-
Analysis of the conserved glycosylation site in the nicotinic acetylcholine receptor: Potential roles in complex assembly
-
DOI 10.1016/1074-5521(95)90103-5
-
KW Rickert B Imperiali 1995 Analysis of the conserved glycosylation site in the nicotinic acetylcholine receptor: potential roles in complex assembly Chem Biol 2 751 759 (Pubitemid 3001115)
-
(1995)
Chemistry and Biology
, vol.2
, Issue.11
, pp. 751-759
-
-
Rickert, K.W.1
Imperiali, B.2
-
152
-
-
0026337737
-
Structure of a legume lectin with an ordered N-linked carbohydrate in complex with lactose
-
B Shaanan H Lis N Sharon 1991 Structure of a legume lectin with an ordered N-linked carbohydrate in complex with lactose Science 254 862 866 (Pubitemid 21917415)
-
(1991)
Science
, vol.254
, Issue.5033
, pp. 862-866
-
-
Shaanan, B.1
Lis, H.2
Sharon, N.3
-
153
-
-
0028198111
-
How N-linked oligosaccharides affect glycoprotein folding in the endoplasmic reticulum
-
A Helenius 1994 How N-linked oligosaccharides affect glycoprotein folding in the endoplasmic reticulum Mol Biol Cell 5 253 265 (Pubitemid 24116952)
-
(1994)
Molecular Biology of the Cell
, vol.5
, Issue.3
, pp. 253-265
-
-
Helenius, A.1
-
154
-
-
0018083350
-
Effect of tunicamycin on IgM, IgA, and IgG secretion by mouse plasmacytoma cells
-
S Hickman S Kornfeld 1978 Effect of tunicamycin on IgM, IgA, and IgG secretion by mouse plasmacytoma cells J Immunol 121 990 996 (Pubitemid 9012116)
-
(1978)
Journal of Immunology
, vol.121
, Issue.3
, pp. 990-996
-
-
Hickman, S.1
Kornfeld, S.2
-
155
-
-
0021930520
-
Differential glycosylation requirements for the cell surface expression of class I molecules
-
NF Landolfi RR Rich RG Cook 1985 Differential glycosylation requirements for the cell surface expression of class I molecules J Immunol 134 423 430 (Pubitemid 15191531)
-
(1985)
Journal of Immunology
, vol.134
, Issue.1
, pp. 423-430
-
-
Landolfi, N.F.1
Rich, R.R.2
Cook, R.G.3
-
156
-
-
0020701014
-
Analysis of the oligosaccharides on the HLA-DR and DC1 B cell antigens
-
DA Shackelford JL Strominger 1983 Analysis of the oligosaccharides on the HLA-DR and DC1 B cell antigens J Immunol 130 274 282 (Pubitemid 13172666)
-
(1983)
Journal of Immunology
, vol.130
, Issue.1
, pp. 274-282
-
-
Shackelford, D.A.1
Strominger, J.L.2
-
157
-
-
0030667061
-
The number and location of glycans on influenza hemagglutinin determine folding and association with calnexin and calreticulin
-
DOI 10.1083/jcb.139.3.613
-
DN Hebert JX Zhang W Chen B Foellmer A Helenius 1997 The number and location of glycans on influenza hemagglutinin determine folding and association with calnexin and calreticulin J Cell Biol 139 613 623 (Pubitemid 27485828)
-
(1997)
Journal of Cell Biology
, vol.139
, Issue.3
, pp. 613-623
-
-
Hebert, D.N.1
Zhang, J.-X.2
Chen, W.3
Foellmer, B.4
Helenius, A.5
-
159
-
-
0032526093
-
Human α-galactosidase A: Glycosylation site 3 is essential for enzyme solubility
-
YA Ioannou KM Zeidner ME Grace RJ Desnick 1998 Human alpha-galactosidase A: glycosylation site 3 is essential for enzyme solubility Biochem J 332 789 797 (Pubitemid 28306707)
-
(1998)
Biochemical Journal
, vol.332
, Issue.3
, pp. 789-797
-
-
Ioannou, Y.A.1
Zeidner, K.M.2
Grace, M.E.3
Desnick, R.J.4
-
160
-
-
41449083869
-
Stabilization of the collagen triple helix by O-methylation of hydroxyproline residues
-
FW Kotch IA Guzei RT Raines 2008 Stabilization of the collagen triple helix by O-methylation of hydroxyproline residues J Am Chem Soc 130 2952 2953
-
(2008)
J Am Chem Soc
, vol.130
, pp. 2952-2953
-
-
Kotch, F.W.1
Guzei, I.A.2
Raines, R.T.3
-
161
-
-
33646127611
-
2005 Emil Thomas Kaiser Award
-
RT Raines 2006 2005 Emil Thomas Kaiser Award Protein Sci 15 1219 1225
-
(2006)
Protein Sci
, vol.15
, pp. 1219-1225
-
-
Raines, R.T.1
-
162
-
-
0030963588
-
The collagen triple-helix structure
-
DOI 10.1016/S0945-053X(97)90030-5
-
B Brodsky JA Ramshaw 1997 The collagen triple-helix structure Matrix Biol 15 545 554 (Pubitemid 27190029)
-
(1997)
Matrix Biology
, vol.15
, Issue.8-9
, pp. 545-554
-
-
Brodsky, B.1
Ramshaw, J.A.M.2
-
163
-
-
29344443859
-
Conotoxins and the posttranslational modification of secreted gene products
-
DOI 10.1007/s00018-005-5283-0
-
O Buczek G Bulaj BM Olivera 2005 Conotoxins and the posttranslational modification of secreted gene products Cell Mol Life Sci 62 3067 3079 (Pubitemid 43004755)
-
(2005)
Cellular and Molecular Life Sciences
, vol.62
, Issue.24
, pp. 3067-3079
-
-
Buczek, O.1
Bulaj, G.2
Olivera, B.M.3
-
164
-
-
38949200281
-
Role of hydroxyprolines in the in vitro oxidative folding and biological activity of conotoxins
-
DOI 10.1021/bi701934m
-
E Lopez-Vera A Walewska JJ Skalicky BM Olivera G Bulaj 2008 Role of hydroxyprolines in the in vitro oxidative folding and biological activity of conotoxins Biochemistry 47 1741 1751 (Pubitemid 351231223)
-
(2008)
Biochemistry
, vol.47
, Issue.6
, pp. 1741-1751
-
-
Lopez-Vera, E.1
Walewska, A.2
Skalicky, J.J.3
Olivera, B.M.4
Bulaj, G.5
-
165
-
-
0030175309
-
Oxidative folding of omega-conotoxin MVIIC: Effects of temperature and salt
-
S Kubo N Chino T Kimura S Sakakibara 1996 Oxidative folding of omega-conotoxin MVIIC: effects of temperature and salt Biopolymers 38 733 744
-
(1996)
Biopolymers
, vol.38
, pp. 733-744
-
-
Kubo, S.1
Chino, N.2
Kimura, T.3
Sakakibara, S.4
-
166
-
-
14044256548
-
Three binding sites in protein-disulfide isomerase cooperate in collagen prolyl 4-hydroxylase tetramer assembly
-
DOI 10.1074/jbc.M412480200
-
P Koivunen KE Salo J Myllyharju LW Ruddock 2005 Three binding sites in protein-disulfide isomerase cooperate in collagen prolyl 4-hydroxylase tetramer assembly J Biol Chem 280 5227 5235 (Pubitemid 40279994)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.7
, pp. 5227-5235
-
-
Koivunen, P.1
Salo, K.E.H.2
Myllyharju, J.3
Ruddock, L.W.4
-
168
-
-
0028175481
-
C-terminal amidated peptides: Production by the in vitro enzymatic amidation of glycine-extended peptides and the importance of the amide to bioactivity
-
DJ Merkler 1994 C-terminal amidated peptides: production by the in vitro enzymatic amidation of glycine-extended peptides and the importance of the amide to bioactivity Enzyme Microb Technol 16 450 456
-
(1994)
Enzyme Microb Technol
, vol.16
, pp. 450-456
-
-
Merkler, D.J.1
-
169
-
-
18844471721
-
How C-Terminal Carboxyamidation Alters the Biological Activity of Peptides from the Venom of the Eumenine Solitary Wasp
-
DOI 10.1021/bi0360915
-
ML Sforca S Oyama Jr F Canduri CC Lorenzi TA Pertinhez K Konno BM Souza MS Palma J Ruggiero Neto WF Azevedo Jr A Spisni 2004 How C-terminal carboxyamidation alters the biological activity of peptides from the venom of the eumenine solitary wasp Biochemistry 43 5608 5617 (Pubitemid 38623595)
-
(2004)
Biochemistry
, vol.43
, Issue.19
, pp. 5608-5617
-
-
Sforca, M.L.1
Oyama Jr., S.2
Canduri, F.3
Lorenzi, C.C.B.4
Pertinhez, T.A.5
Konno, K.6
Souza, B.M.7
Palma, M.S.8
Neto, J.R.9
Azevedo Jr., W.F.10
Spisni, A.11
-
170
-
-
0029958321
-
Protegrins: Structural requirements for inactivating elementary bodies of Chlamydia trachomatis
-
B Yasin RI Lehrer SS Harwig EA Wagar 1996 Protegrins: structural requirements for inactivating elementary bodies of Chlamydia trachomatis Infect Immun 64 4863 4866 (Pubitemid 26357106)
-
(1996)
Infection and Immunity
, vol.64
, Issue.11
, pp. 4863-4866
-
-
Yasin, B.1
Lehrer, R.I.2
Harwig, S.S.L.3
Wagar, E.A.4
-
171
-
-
0036710663
-
Significance of a carboxyl-terminal amide moiety in the folding and biological activity of crustacean hyperglycemic hormone
-
DOI 10.1016/S0196-9781(02)00094-3, PII S0196978102000943
-
H Katayama T Ohira K Aida H Nagasawa 2002 Significance of a carboxyl-terminal amide moiety in the folding and biological activity of crustacean hyperglycemic hormone Peptides 23 1537 1546 (Pubitemid 35246272)
-
(2002)
Peptides
, vol.23
, Issue.9
, pp. 1537-1546
-
-
Katayama, H.1
Ohira, T.2
Aida, K.3
Nagasawa, H.4
-
172
-
-
0028174888
-
The NH2-terminal alpha-helical domain 1-18 of dermaseptin is responsible for antimicrobial activity
-
A Mor P Nicolas 1994 The NH2-terminal alpha-helical domain 1-18 of dermaseptin is responsible for antimicrobial activity J Biol Chem 269 1934 1939
-
(1994)
J Biol Chem
, vol.269
, pp. 1934-1939
-
-
Mor, A.1
Nicolas, P.2
-
173
-
-
0032922778
-
Biological activity of carboxy-terminal gastrin analogs
-
DOI 10.1016/S0014-2999(98)00846-2, PII S0014299998008462
-
AK Sandvik GJ Dockray 1999 Biological activity of carboxy-terminal gastrin analogs Eur J Pharmacol 364 199 203 (Pubitemid 29065271)
-
(1999)
European Journal of Pharmacology
, vol.364
, Issue.2-3
, pp. 199-203
-
-
Sandvik, A.K.1
Dockray, G.J.2
-
175
-
-
0011209193
-
Locust ion transport peptide (ITP): Primary structure, cDNA and expression in a baculovirus system
-
J Meredith M Ring A Macins J Marschall NN Cheng D Theilmann HW Brock JE Phillips 1996 Locust ion transport peptide (ITP): primary structure, cDNA and expression in a baculovirus system J Exp Biol 199 1053 1061 (Pubitemid 126603370)
-
(1996)
Journal of Experimental Biology
, vol.199
, Issue.5
, pp. 1053-1061
-
-
Meredith, J.1
Ring, M.2
Macins, A.3
Marschall, J.4
Cheng, N.N.5
Theilmann, D.6
Brock, H.W.7
Phillips, J.E.8
-
176
-
-
17144410377
-
Oxidative folding of conotoxins sharing an identical disulfide bridging framework
-
DOI 10.1111/j.1742-4658.2005.04602.x
-
E Fuller BR Green P Catlin O Buczek JS Nielsen BM Olivera G Bulaj 2005 Oxidative folding of conotoxins sharing an identical disulfide bridging framework FEBS J 272 1727 1738 (Pubitemid 40516222)
-
(2005)
FEBS Journal
, vol.272
, Issue.7
, pp. 1727-1738
-
-
Fuller, E.1
Green, B.R.2
Catlin, P.3
Buczek, O.4
Nielsen, J.S.5
Olivera, B.M.6
Bulaj, G.7
-
177
-
-
0026767184
-
Vitamin K metabolism and nutriture
-
MJ Shearer 1992 Vitamin K metabolism and nutriture Blood Rev 6 92 104
-
(1992)
Blood Rev
, vol.6
, pp. 92-104
-
-
Shearer, M.J.1
-
179
-
-
0016682438
-
Isolation and characterization of vitamin K-dependent region of bovine blood clotting factor X
-
JB Howard GL Nelsestuen 1975 Isolation and characterization of vitamin K-dependent region of bovine blood clotting factor X Proc Natl Acad Sci USA 72 1281 1285
-
(1975)
Proc Natl Acad Sci USA
, vol.72
, pp. 1281-1285
-
-
Howard, J.B.1
Nelsestuen, G.L.2
-
180
-
-
0021891883
-
Vitamin K-dependent carboxylase
-
JW Suttie 1985 Vitamin K-dependent carboxylase Annu Rev Biochem 54 459 477 (Pubitemid 15073654)
-
(1985)
Annual Review of Biochemistry
, vol.54
, pp. 459-477
-
-
Suttie, J.W.1
-
182
-
-
0033545924
-
2+ influx
-
DOI 10.1073/pnas.96.10.5758
-
AC Rigby E Lucas-Meunier DE Kalume E Czerwiec B Hambe I Dahlqvist P Fossier G Baux P Roepstorff JD Baleja BC Furie B Furie J Stenflo 1999 A conotoxin from Conus textile with unusual posttranslational modifications reduces presynaptic Ca2+ influx Proc Natl Acad Sci USA 96 5758 5763 (Pubitemid 29234691)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.10
, pp. 5758-5763
-
-
Rigby, A.C.1
Lucas-Meunier, E.2
Kalume, D.E.3
Czerwiec, E.4
Hambe, B.5
Dahlqvist, I.6
Fossier, P.7
Baux, G.8
Roepstorff, P.9
Baleja, J.D.10
Furie, B.C.11
Furie, B.12
Stenflo, J.13
-
183
-
-
0344198482
-
Efficient oxidative folding of conotoxins and the radiation of venomous cone snails
-
G Bulaj O Buczek I Goodsell EC Jimenez J Kranski JS Nielsen JE Garrett BM Olivera 2003 Efficient oxidative folding of conotoxins and the radiation of venomous cone snails Proc Natl Acad Sci USA 100 Suppl 2 14562 14568 (Pubitemid 37499282)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.24
, pp. 14562-14568
-
-
Bulaj, G.1
Buczek, O.2
Goodsell, I.3
Jimenez, E.C.4
Kranski, J.5
Nielsen, J.S.6
Garrett, J.E.7
Olivera, B.M.8
-
184
-
-
49449100631
-
Conantokin-P, an unusual conantokin with a long disulfide loop
-
KH Gowd V Twede M Watkins KS Krishnan RW Teichert G Bulaj BM Olivera 2008 Conantokin-P, an unusual conantokin with a long disulfide loop Toxicon 52 203 213
-
(2008)
Toxicon
, vol.52
, pp. 203-213
-
-
Gowd, K.H.1
Twede, V.2
Watkins, M.3
Krishnan, K.S.4
Teichert, R.W.5
Bulaj, G.6
Olivera, B.M.7
-
185
-
-
0032568831
-
Conformational changes in conantokin-G induced upon binding of calcium and magnesium as revealed by NMR structural analysis
-
DOI 10.1074/jbc.273.26.16248
-
Z Chen T Blandl M Prorok SE Warder L Li Y Zhu LG Pedersen F Ni FJ Castellino 1998 Conformational changes in conantokin-G induced upon binding of calcium and magnesium as revealed by NMR structural analysis J Biol Chem 273 16248 16258 (Pubitemid 28311401)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.26
, pp. 16248-16258
-
-
Chen, Z.1
Blandl, T.2
Prorok, M.3
Warder, S.E.4
Li, L.5
Zhu, Y.6
Pedersen, L.G.7
Ni, F.8
Castellino, F.J.9
-
186
-
-
39649088661
-
Conformational switching upon phosphorylation: A predictive framework based on energy landscape principles
-
DOI 10.1021/bi701350v
-
J Latzer T Shen PG Wolynes 2008 Conformational switching upon phosphorylation: a predictive framework based on energy landscape principles Biochemistry 47 2110 2122 (Pubitemid 351287137)
-
(2008)
Biochemistry
, vol.47
, Issue.7
, pp. 2110-2122
-
-
Latzer, J.1
Shen, T.2
Wolynes, P.G.3
-
187
-
-
0035413607
-
Structural basis for control by phosphorylation
-
DOI 10.1021/cr000225s
-
LN Johnson RJ Lewis 2001 Structural basis for control by phosphorylation Chem Rev 101 2209 2242 (Pubitemid 35373017)
-
(2001)
Chemical Reviews
, vol.101
, Issue.8
, pp. 2209-2242
-
-
Johnson, L.N.1
Lewis, R.J.2
-
188
-
-
0037086355
-
Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail
-
DOI 10.1126/science.1069473
-
SA Jacobs S Khorasanizadeh 2002 Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail Science 295 2080 2083 (Pubitemid 34229471)
-
(2002)
Science
, vol.295
, Issue.5562
, pp. 2080-2083
-
-
Jacobs, S.A.1
Khorasanizadeh, S.2
-
189
-
-
1242274599
-
Comparison of C-Hπ and Hydrophobic Interactions in a β-Hairpin Peptide: Impact on Stability and Specificity
-
DOI 10.1021/ja038258n
-
CD Tatko ML Waters 2004 Comparison of C-H. pi and hydrophobic interactions in a beta-hairpin peptide: impact on stability and specificity J Am Chem Soc 126 2028 2034 (Pubitemid 38228883)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.7
, pp. 2028-2034
-
-
Tatko, C.D.1
Waters, M.L.2
-
190
-
-
18644381214
-
Influence of N-methylation on a cation-π interaction produces a remarkably stable β-hairpin peptide
-
DOI 10.1021/ja0507259
-
RM Hughes ML Waters 2005 Influence of N-methylation on a cation-pi interaction produces a remarkably stable beta-hairpin peptide J Am Chem Soc 127 6518 6519 (Pubitemid 40664143)
-
(2005)
Journal of the American Chemical Society
, vol.127
, Issue.18
, pp. 6518-6519
-
-
Hughes, R.M.1
Waters, M.L.2
-
191
-
-
33749535702
-
p°, and the cold denatured state
-
DOI 10.1021/ja061656g
-
RM Hughes ML Waters 2006 Arginine methylation in a beta-hairpin peptide: implications for Arg-pi interactions, DeltaCp(o), and the cold denatured state J Am Chem Soc 128 12735 12742 (Pubitemid 44527749)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.39
, pp. 12735-12742
-
-
Hughes, R.M.1
Waters, M.L.2
-
192
-
-
0030891858
-
mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila
-
DOI 10.1093/emboj/16.8.2054
-
A Hilfiker D Hilfiker-Kleiner A Pannuti JC Lucchesi 1997 mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila EMBO J 16 2054 2060 (Pubitemid 27170966)
-
(1997)
EMBO Journal
, vol.16
, Issue.8
, pp. 2054-2060
-
-
Hilfiker, A.1
Hilfiker-Kleiner, D.2
Pannuti, A.3
Lucchesi, J.C.4
-
193
-
-
34250854596
-
Nitration in neurodegeneration: Deciphering the 'hows' 'nYs'
-
DOI 10.1021/bi700430y
-
MR Reynolds RW Berry LI Binder 2007 Nitration in neurodegeneration: deciphering the "Hows" "nYs" Biochemistry 46 7325 7336 (Pubitemid 46986359)
-
(2007)
Biochemistry
, vol.46
, Issue.25
, pp. 7325-7336
-
-
Reynolds, M.R.1
Berry, R.W.2
Binder, L.I.3
-
195
-
-
0025363984
-
Deciphering the message in protein sequences: Tolerance to amino acid substitutions
-
JU Bowie JF Reidhaar-Olson WA Lim RT Sauer 1990 Deciphering the message in protein sequences: tolerance to amino acid substitutions Science 247 1306 1310
-
(1990)
Science
, vol.247
, pp. 1306-1310
-
-
Bowie, J.U.1
Reidhaar-Olson, J.F.2
Lim, W.A.3
Sauer, R.T.4
-
197
-
-
0018355613
-
Genetic studies of the lac repressor. XI. On aspects of lac repressor structure suggested by genetic experiments
-
DOI 10.1016/0022-2836(79)90075-5
-
JH Miller 1979 Genetic studies of the lac repressor. XI. On aspects of lac repressor structure suggested by genetic experiments J Mol Biol 131 249 258 (Pubitemid 9230182)
-
(1979)
Journal of Molecular Biology
, vol.131
, Issue.2
, pp. 249-258
-
-
Miller, J.H.1
-
198
-
-
0018382589
-
Genetic studies of the lac repressor. IX. Generation of altered proteins by the suppression of nonsense mutations
-
DOI 10.1016/0022-2836(79)90073-1
-
JH Miller C Coulondre M Hofer U Schmeissner H Sommer A Schmitz P Lu 1979 Genetic studies of the lac repressor. IX. Generation of altered proteins by the suppression of nonsence mutations J Mol Biol 131 191 222 (Pubitemid 9230180)
-
(1979)
Journal of Molecular Biology
, vol.131
, Issue.2
, pp. 191-222
-
-
Miller, J.H.1
Coulondre, C.2
Hofer, M.3
-
199
-
-
0018391102
-
Genetic studies of the lac repressor. X. Analysis of missense mutations in the lacI gene
-
DOI 10.1016/0022-2836(79)90074-3
-
JH Miller U Schmeissner 1979 Genetic studies of the lac repressor. X. Analysis of missense mutations in the lacI gene J Mol Biol 131 223 248 (Pubitemid 9230181)
-
(1979)
Journal of Molecular Biology
, vol.131
, Issue.2
, pp. 223-248
-
-
Miller, J.H.1
Schmeissner, U.2
-
201
-
-
55749087870
-
Crystal structure of an extensively simplified variant of bovine pancreatic trypsin inhibitor in which over one-third of the residues are alanines
-
MM Islam S Sohya K Noguchi M Yohda Y Kuroda 2008 Crystal structure of an extensively simplified variant of bovine pancreatic trypsin inhibitor in which over one-third of the residues are alanines Proc Natl Acad Sci USA 105 15334 15339
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15334-15339
-
-
Islam, M.M.1
Sohya, S.2
Noguchi, K.3
Yohda, M.4
Kuroda, Y.5
-
202
-
-
0034607555
-
Folding of bovine pancreatic trypsin inhibitor (BPTI) variants in which almost half the residues are alanine
-
DOI 10.1006/jmbi.2000.3622
-
Y Kuroda PS Kim 2000 Folding of bovine pancreatic trypsin inhibitor (BPTI) variants in which almost half the residues are alanine J Mol Biol 298 493 501 (Pubitemid 30694258)
-
(2000)
Journal of Molecular Biology
, vol.298
, Issue.3
, pp. 493-501
-
-
Kuroda, Y.1
Kim, P.S.2
-
203
-
-
0028608066
-
Redesigning the hydrophobic core of a four-helix-bundle protein
-
M Munson R O'Brien JM Sturtevant L Regan 1994 Redesigning the hydrophobic core of a four-helix-bundle protein Protein Sci 3 2015 2022
-
(1994)
Protein Sci
, vol.3
, pp. 2015-2022
-
-
Munson, M.1
O'Brien, R.2
Sturtevant, J.M.3
Regan, L.4
-
205
-
-
0023176681
-
Determinants of a protein fold. Unique features of the globin amino acid sequences
-
DOI 10.1016/0022-2836(87)90521-3
-
D Bashford C Chothia AM Lesk 1987 Determinants of a protein fold. Unique features of the globin amino acid sequences J Mol Biol 196 199 216 (Pubitemid 17102240)
-
(1987)
Journal of Molecular Biology
, vol.196
, Issue.1
, pp. 199-216
-
-
Bashford, D.1
Chothia, C.2
Lesk, A.M.3
-
207
-
-
0024295240
-
Contribution of hydrophobic interactions to protein stability
-
JT Kellis Jr K Nyberg D Sali AR Fersht 1988 Contribution of hydrophobic interactions to protein stability Nature 333 784 786
-
(1988)
Nature
, vol.333
, pp. 784-786
-
-
Kellis Jr, J.T.1
Nyberg, K.2
Sali, D.3
Fersht, A.R.4
-
209
-
-
0029958604
-
A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme
-
NC Gassner WA Baase BW Matthews 1996 A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme Proc Natl Acad Sci USA 93 12155 12158
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12155-12158
-
-
Gassner, N.C.1
Baase, W.A.2
Matthews, B.W.3
-
210
-
-
0025908265
-
The role of internal packing interactions in determining the structure and stability of a protein
-
WA Lim RT Sauer 1991 The role of internal packing interactions in determining the structure and stability of a protein J Mol Biol 219 359 376
-
(1991)
J Mol Biol
, vol.219
, pp. 359-376
-
-
Lim, W.A.1
Sauer, R.T.2
-
211
-
-
0027716138
-
The role of backbone flexibility in the accommodation of variants that repack the core of T4 lysozyme
-
EP Baldwin O Hajiseyedjavadi WA Baase BW Matthews 1993 The role of backbone flexibility in the accommodation of variants that repack the core of T4 lysozyme Science 262 1715 1718 (Pubitemid 24030091)
-
(1993)
Science
, vol.262
, Issue.5140
, pp. 1715-1718
-
-
Baldwin, E.P.1
Hajiseyedjavadi, O.2
Baase, W.A.3
Matthews, B.W.4
-
212
-
-
0028920911
-
Protein thermal denaturation, side-chain models, and evolution: Amino acid substitutions at a conserved helix-helix interface
-
GJ Pielak DS Auld JR Beasley SF Betz DS Cohen DF Doyle SA Finger ZL Fredericks S Hilgen-Willis AJ Saunders 1995 Protein thermal denaturation, side-chain models, and evolution: amino acid substitutions at a conserved helix-helix interface Biochemistry 34 3268 3276
-
(1995)
Biochemistry
, vol.34
, pp. 3268-3276
-
-
Pielak, G.J.1
Auld, D.S.2
Beasley, J.R.3
Betz, S.F.4
Cohen, D.S.5
Doyle, D.F.6
Finger, S.A.7
Fredericks, Z.L.8
Hilgen-Willis, S.9
Saunders, A.J.10
-
214
-
-
23444436172
-
Protein design by binary patterning of polar and nonpolar amino acids
-
S Kamtekar JM Schiffer H Xiong JM Babik MH Hecht 1993 Protein design by binary patterning of polar and nonpolar amino acids Science 262 1680 1685 (Pubitemid 24030088)
-
(1993)
Science
, vol.262
, Issue.5140
, pp. 1680-1685
-
-
Kamtekar, S.1
Schiffer, J.M.2
Xiong, H.3
Babik, J.M.4
Hecht, M.H.5
-
215
-
-
0035471132
-
De novo proteins from combinatorial libraries
-
DOI 10.1021/cr000051e
-
DA Moffet MH Hecht 2001 De novo proteins from combinatorial libraries Chem Rev 101 3191 3203 (Pubitemid 35377817)
-
(2001)
Chemical Reviews
, vol.101
, Issue.10
, pp. 3191-3203
-
-
Moffet, D.A.1
Hecht, M.H.2
-
216
-
-
0027756896
-
a switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants
-
PB Harbury T Zhang PS Kim T Alber 1993 A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants Science 262 1401 1407 (Pubitemid 23983059)
-
(1993)
Science
, vol.262
, Issue.5138
, pp. 1401-1407
-
-
Harbury, P.B.1
Zhang, T.2
Kim, P.S.3
Alber, T.4
-
218
-
-
0030852463
-
Functional rapidly folding proteins from simplified amino acid sequences
-
DOI 10.1038/nsb1097-805
-
DS Riddle JV Santiago ST Bray-Hall N Doshi VP Grantcharova Q Yi D Baker 1997 Functional rapidly folding proteins from simplified amino acid sequences Nat Struct Biol 4 805 809 (Pubitemid 27435345)
-
(1997)
Nature Structural Biology
, vol.4
, Issue.10
, pp. 805-809
-
-
Riddle, D.S.1
Santiago, J.V.2
Bray-Hall, S.T.3
Doshi, N.4
Grantcharova, V.P.5
Yi, Q.6
Baker, D.7
-
220
-
-
27844496157
-
An active enzyme constructed from a 9-amino acid alphabet
-
DOI 10.1074/jbc.M507210200
-
KU Walter K Vamvaca D Hilvert 2005 An active enzyme constructed from a 9-amino acid alphabet J Biol Chem 280 37742 37746 (Pubitemid 41642383)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.45
, pp. 37742-37746
-
-
Walter, K.U.1
Vamvaca, K.2
Hilvert, D.3
-
223
-
-
0027937869
-
Three-dimensional structure of a type VI turn in a linear peptide in water solution. Evidence for stacking of aromatic rings as a major stabilizing factor
-
J Yao HJ Dyson PE Wright 1994 Three-dimensional structure of a type VI turn in a linear peptide in water solution. Evidence for stacking of aromatic rings as a major stabilizing factor J Mol Biol 243 754 766
-
(1994)
J Mol Biol
, vol.243
, pp. 754-766
-
-
Yao, J.1
Dyson, H.J.2
Wright, P.E.3
-
224
-
-
46049088691
-
Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs
-
DOI 10.1016/j.str.2008.05.007, PII S096921260800213X
-
DT Moore BW Berger WF DeGrado 2008 Protein-protein interactions in the membrane: sequence, structural, and biological motifs Structure 16 991 1001 (Pubitemid 351899292)
-
(2008)
Structure
, vol.16
, Issue.7
, pp. 991-1001
-
-
Moore, D.T.1
Berger, B.W.2
DeGrado, W.F.3
-
225
-
-
33645513980
-
Theoretical approaches to protein aggregation
-
J Gsponer M Vendruscolo 2006 Theoretical approaches to protein aggregation Protein Pept Lett 13 287 293
-
(2006)
Protein Pept Lett
, vol.13
, pp. 287-293
-
-
Gsponer, J.1
Vendruscolo, M.2
-
226
-
-
0030841343
-
Conformational disease
-
DOI 10.1016/S0140-6736(97)02073-4
-
RW Carrell DA Lomas 1997 Conformational disease Lancet 350 134 138 (Pubitemid 27313650)
-
(1997)
Lancet
, vol.350
, Issue.9071
, pp. 134-138
-
-
Carrell, R.W.1
Lomas, D.A.2
-
227
-
-
34748871331
-
G protein-coupled receptor trafficking in health and disease: Lessons learned to prepare for therapeutic mutant rescue in vivo
-
DOI 10.1124/pr.59.3.2
-
PM Conn A Ulloa-Aguirre J Ito JA Janovick 2007 G protein-coupled receptor trafficking in health and disease: lessons learned to prepare for therapeutic mutant rescue in vivo Pharmacol Rev 59 225 250 (Pubitemid 47481435)
-
(2007)
Pharmacological Reviews
, vol.59
, Issue.3
, pp. 225-250
-
-
Conn, P.M.1
Ulloa-Aguirre, A.2
Ito, J.3
Janovick, J.A.4
-
228
-
-
32944476769
-
Enzyme replacement for lysosomal diseases
-
DOI 10.1146/annurev.med.57.110104.115650
-
RO Brady 2006 Enzyme replacement for lysosomal diseases Annu Rev Med 57 283 296 (Pubitemid 43261992)
-
(2006)
Annual Review of Medicine
, vol.57
, pp. 283-296
-
-
Brady, R.O.1
-
229
-
-
40049100326
-
Protein folding, unfolding and misfolding: Role played by intermediate states
-
DOI 10.2174/138955708783331522
-
R Santucci F Sinibaldi L Fiorucci 2008 Protein folding, unfolding and misfolding: role played by intermediate States Mini Rev Med Chem 8 57 62 (Pubitemid 351320930)
-
(2008)
Mini-Reviews in Medicinal Chemistry
, vol.8
, Issue.1
, pp. 57-62
-
-
Santucci, R.1
Sinibaldi, F.2
Fiorucci, L.3
-
230
-
-
0030793767
-
De novo protein design: Fully automated sequence selection
-
DOI 10.1126/science.278.5335.82
-
BI Dahiyat SL Mayo 1997 De novo protein design: fully automated sequence selection Science 278 82 87 (Pubitemid 27446279)
-
(1997)
Science
, vol.278
, Issue.5335
, pp. 82-87
-
-
Dahiyat, B.I.1
Mayo, S.L.2
-
231
-
-
2642670311
-
Design of a 20-amino acid, three-stranded β-sheet protein
-
DOI 10.1126/science.281.5374.253
-
T Kortemme M Ramirez-Alvarado L Serrano 1998 Design of a 20-amino acid, three-stranded beta-sheet protein Science 281 253 256 (Pubitemid 28334507)
-
(1998)
Science
, vol.281
, Issue.5374
, pp. 253-256
-
-
Kortemme, T.1
Ramirez-Alvarado, M.2
Serrano, L.3
-
232
-
-
0345306764
-
Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
-
DOI 10.1126/science.1089427
-
B Kuhlman G Dantas GC Ireton G Varani BL Stoddard D Baker 2003 Design of a novel globular protein fold with atomic-level accuracy Science 302 1364 1368 (Pubitemid 37452172)
-
(2003)
Science
, vol.302
, Issue.5649
, pp. 1364-1368
-
-
Kuhlman, B.1
Dantas, G.2
Ireton, G.C.3
Varani, G.4
Stoddard, B.L.5
Baker, D.6
-
233
-
-
0025040232
-
De novo design, expression, and characterization of Felix: A four-helix bundle protein of native-like sequence
-
MH Hecht JS Richardson DC Richardson RC Ogden 1990 De novo design, expression, and characterization of Felix: a four-helix bundle protein of native-like sequence Science 249 884 891
-
(1990)
Science
, vol.249
, pp. 884-891
-
-
Hecht, M.H.1
Richardson, J.S.2
Richardson, D.C.3
Ogden, R.C.4
-
234
-
-
2342649511
-
Combinatorial approaches to protein stability and structure
-
DOI 10.1111/j.1432-1033.2004.04075.x
-
TJ Magliery L Regan 2004 Combinatorial approaches to protein stability and structure Eur J Biochem 271 1595 1608 (Pubitemid 38586292)
-
(2004)
European Journal of Biochemistry
, vol.271
, Issue.9
, pp. 1595-1608
-
-
Magliery, T.J.1
Regan, L.2
-
235
-
-
0035471133
-
De novo design of proteins - What are the rules?
-
DOI 10.1021/cr0000473
-
L Baltzer H Nilsson J Nilsson 2001 De novo design of proteins-what are the rules? Chem Rev 101 3153 3163 (Pubitemid 35377815)
-
(2001)
Chemical Reviews
, vol.101
, Issue.10
, pp. 3153-3163
-
-
Baltzer, L.1
Nilsson, H.2
Nilsson, J.3
-
236
-
-
36749042541
-
Critical assessment of methods of protein structure prediction - Round VII
-
DOI 10.1002/prot.21767
-
J Moult K Fidelis A Kryshtafovych B Rost T Hubbard A Tramontano 2007 Critical assessment of methods of protein structure prediction-Round VII Proteins 69 Suppl 8 3 9 (Pubitemid 350210108)
-
(2007)
Proteins: Structure, Function and Genetics
, vol.69
, Issue.SUPPL. 8
, pp. 3-9
-
-
Moult, J.1
Fidelis, K.2
Kryshtafovych, A.3
Rost, B.4
Hubbard, T.5
Tramontano, A.6
-
237
-
-
0032744232
-
Protein folding: From the levinthal paradox to structure prediction
-
DOI 10.1006/jmbi.1999.3006
-
B Honig 1999 Protein folding: from the levinthal paradox to structure prediction J Mol Biol 293 283 293 (Pubitemid 29516170)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 283-293
-
-
Honig, B.1
-
238
-
-
33749860977
-
Post-translational modifications in the context of therapeutic proteins
-
DOI 10.1038/nbt1252, PII NBT1252
-
G Walsh R Jefferis 2006 Post-translational modifications in the context of therapeutic proteins Nat Biotechnol 24 1241 1252 (Pubitemid 44564769)
-
(2006)
Nature Biotechnology
, vol.24
, Issue.10
, pp. 1241-1252
-
-
Walsh, G.1
Jefferis, R.2
-
240
-
-
0035907254
-
Tyrosine sulfation of glycoprotein I(b)alpha. Role of electrostatic interactions in von Willebrand factor binding
-
J Dong P Ye AJ Schade S Gao GM Romo NT Turner LV [tmp] McIntire JA Lopez 2001 Tyrosine sulfation of glycoprotein I(b)alpha. Role of electrostatic interactions in von Willebrand factor binding J Biol Chem 276 16690 16694
-
(2001)
J Biol Chem
, vol.276
, pp. 16690-16694
-
-
Dong, J.1
Ye, P.2
Schade, A.J.3
Gao, S.4
Romo, G.M.5
Turner, N.T.6
McIntire, L.V.7
Lopez, J.A.8
-
241
-
-
0029824853
-
Protein unfolding by peptidylarginine deiminase. Substrate specificity and structural relationships of the natural substrates trichohyalin and filaggrin
-
E Tarcsa LN Marekov G Mei G Melino SC Lee PM Steinert 1996 Protein unfolding by peptidylarginine deiminase. Substrate specificity and structural relationships of the natural substrates trichohyalin and filaggrin J Biol Chem 271 30709 30716
-
(1996)
J Biol Chem
, vol.271
, pp. 30709-30716
-
-
Tarcsa, E.1
Marekov, L.N.2
Mei, G.3
Melino, G.4
Lee, S.C.5
Steinert, P.M.6
-
242
-
-
46449089929
-
Polyglutamylation: A fine-regulator of protein function? 'Protein modifications: Beyond the usual suspects' review series
-
C Janke K Rogowski J van Dijk 2008 Polyglutamylation: a fine-regulator of protein function? 'Protein modifications: beyond the usual suspects' review series EMBO Rep 9 636 641
-
(2008)
EMBO Rep
, vol.9
, pp. 636-641
-
-
Janke, C.1
Rogowski, K.2
Van Dijk, J.3
-
243
-
-
0031039519
-
Tubulin post-translational modifications. Enzymes and their mechanisms of action
-
TH [tmp] MacRae 1997 Tubulin post-translational modifications-enzymes and their mechanisms of action Eur J Biochem 244 265 278 (Pubitemid 27110726)
-
(1997)
European Journal of Biochemistry
, vol.244
, Issue.2
, pp. 265-278
-
-
MacRae, T.H.1
|