-
1
-
-
34047111213
-
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cere-visiae genome
-
PMID:17392789, doi:10.1038/ nature05632
-
Albert, I., Mavrich, T.N., Tomsho, L.P., Qi, J., Zanton, S.J., Schuster, S.C., and Pugh, B.F. 2007. Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cere-visiae genome. Nature, 446(7135): 572-576. doi:10.1038/ nature05632. PMID:17392789.
-
(2007)
Nature
, vol.446
, Issue.7135
, pp. 572-576
-
-
Albert, I.1
Mavrich, T.N.2
Tomsho, L.P.3
Qi, J.4
Zanton, S.J.5
Schuster, S.C.6
Pugh, B.F.7
-
2
-
-
78651162036
-
Acetylation and methylation of histones and their possible role in the regulation of RNA synthesis
-
PMID:14172992, doi:10.1073/pnas.51.5.786
-
Allfrey, V.G., Faulkner, R., and Mirsky, A.E. 1964. Acetylation and methylation of histones and their possible role in the regulation of RNA synthesis. Proc. Natl. Acad. Sci. U.S.A. 51: 786-794. doi:10.1073/pnas.51.5.786. PMID:14172992.
-
(1964)
Proc. Natl. Acad. Sci. U.S.A
, vol.51
, pp. 786-794
-
-
Allfrey, V.G.1
Faulkner, R.2
Mirsky, A.E.3
-
3
-
-
0035089346
-
Function of the c-Myc oncoprotein in chromatin remodeling and transcription
-
PMID:11250069
-
Amati, B., Frank, S.R., Donjerkovic, D., and Taubert, S. 2001. Function of the c-Myc oncoprotein in chromatin remodeling and transcription. Biochim. Biophys. Acta, 1471(3): M135-M145. PMID:11250069.
-
(2001)
Biochim. Biophys. Acta
, vol.1471
, Issue.3
-
-
Amati, B.1
Frank, S.R.2
Donjerkovic, D.3
Taubert, S.4
-
4
-
-
0035815105
-
Effects of his-tone acetylation on the equilibrium accessibility of nucleosomal DNA target sites
-
PMID:11286549, doi:10.1006/ jmbi.2001.4528
-
Anderson, J.D., Lowary, P.T., and Widom, J. 2001. Effects of his-tone acetylation on the equilibrium accessibility of nucleosomal DNA target sites. J. Mol. Biol. 307(4): 977-985. doi:10.1006/ jmbi.2001.4528. PMID:11286549.
-
(2001)
J. Mol. Biol
, vol.307
, Issue.4
, pp. 977-985
-
-
Anderson, J.D.1
Lowary, P.T.2
Widom, J.3
-
5
-
-
41149115039
-
Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants
-
PMID:18212047, doi:10.1128/MCB.01755- 07
-
Auger, A., Galarneau, L., Altaf, M., Nourani, A., Doyon, Y., Utley, R.T., et al. 2008. Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants. Mol. Cell. Biol. 28(7): 2257-2270. doi:10.1128/MCB.01755- 07. PMID:18212047.
-
(2008)
Mol. Cell. Biol
, vol.28
, Issue.7
, pp. 2257-2270
-
-
Auger, A.1
Galarneau, L.2
Altaf, M.3
Nourani, A.4
Doyon, Y.5
Utley, R.T.6
-
6
-
-
0022551060
-
Histone hyperacetylation: Its effects on nucleosome conformation and stability
-
PMID:3964683, doi:10.1021/bi00354a035
-
Ausió, J., and van Holde, K.E. 1986. Histone hyperacetylation: its effects on nucleosome conformation and stability. Biochemistry, 25: 1421-1428. doi:10.1021/bi00354a035. PMID:3964683.
-
(1986)
Biochemistry
, vol.25
, pp. 1421-1428
-
-
Ausió, J.1
van Holde, K.E.2
-
7
-
-
34547879583
-
The SAGA continues: Expanding the cellular role of a transcriptional co-activator complex
-
PMID:17694076, doi:10.1038/sj.onc.1210603
-
Baker, S.P., and Grant, P.A. 2007. The SAGA continues: expanding the cellular role of a transcriptional co-activator complex. Oncogene, 26(37): 5329-5340. doi:10.1038/sj.onc.1210603. PMID:17694076.
-
(2007)
Oncogene
, vol.26
, Issue.37
, pp. 5329-5340
-
-
Baker, S.P.1
Grant, P.A.2
-
8
-
-
0037041022
-
Role of the Ada2 and Ada3 transcriptional coactivators in histone acetylation
-
PMID:11773077, doi:10.1074/jbc. M110849200
-
Balasubramanian, R., Pray-Grant, M.G., Selleck, W., Grant, P.A., and Tan, S. 2002. Role of the Ada2 and Ada3 transcriptional coactivators in histone acetylation. J. Biol. Chem. 277(10): 7989-7995. doi:10.1074/jbc. M110849200. PMID:11773077.
-
(2002)
J. Biol. Chem
, vol.277
, Issue.10
, pp. 7989-7995
-
-
Balasubramanian, R.1
Pray-Grant, M.G.2
Selleck, W.3
Grant, P.A.4
Tan, S.5
-
9
-
-
0035282458
-
Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain
-
PMID:11242054, doi:10.1038/35065138
-
Bannister, A.J., Zegerman, P., Partridge, J.F., Miska, E.A., Thomas, J.O., Allshire, R.C., and Kouzarides, T. 2001. Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain. Nature, 410(6824): 120-124. doi:10.1038/35065138. PMID:11242054.
-
(2001)
Nature
, vol.410
, Issue.6824
, pp. 120-124
-
-
Bannister, A.J.1
Zegerman, P.2
Partridge, J.F.3
Miska, E.A.4
Thomas, J.O.5
Allshire, R.C.6
Kouzarides, T.7
-
10
-
-
0035801706
-
Increasing the rate of chromatin remodeling and gene activation - a novel role for the histone acetyltransferase Gcn5
-
PMID:11532958, doi:10.1093/emboj/20.17. 4944
-
Barbaric, S., Walker, J., Schmid, A., Svejstrup, J.Q., and Horz, W. 2001. Increasing the rate of chromatin remodeling and gene activation - a novel role for the histone acetyltransferase Gcn5. EMBO J. 20(17): 4944-4951. doi:10.1093/emboj/20.17. 4944. PMID:11532958.
-
(2001)
EMBO J
, vol.20
, Issue.17
, pp. 4944-4951
-
-
Barbaric, S.1
Walker, J.2
Schmid, A.3
Svejstrup, J.Q.4
Horz, W.5
-
11
-
-
33847655626
-
Nucleosome recognition by the Piccolo NuA4 histone acetyltransferase complex
-
PMID:17274630, doi:10.1021/bi602366n
-
Berndsen, C.E., Selleck, W., McBryant, S.J., Hansen, J.C., Tan, S., and Denu, J.M. 2007. Nucleosome recognition by the Piccolo NuA4 histone acetyltransferase complex. Biochemistry, 46(8): 2091-2099. doi:10.1021/bi602366n. PMID:17274630.
-
(2007)
Biochemistry
, vol.46
, Issue.8
, pp. 2091-2099
-
-
Berndsen, C.E.1
Selleck, W.2
McBryant, S.J.3
Hansen, J.C.4
Tan, S.5
Denu, J.M.6
-
12
-
-
8444245244
-
Global nucleosome occupancy in yeast
-
PMID: 15345046, doi:10.1186/gb-2004-5-9-r62
-
Bernstein, B.E., Liu, C.L., Humphrey, E.L., Perlstein, E.O., and Schreiber, S.L. 2004. Global nucleosome occupancy in yeast. Genome Biol. 5(9): R62. doi:10.1186/gb-2004-5-9-r62. PMID: 15345046.
-
(2004)
Genome Biol
, vol.5
, Issue.9
-
-
Bernstein, B.E.1
Liu, C.L.2
Humphrey, E.L.3
Perlstein, E.O.4
Schreiber, S.L.5
-
13
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
PMID:15680324, doi:10.1016/j.cell.2005.01.001
-
Bernstein, B.E., Kamal, M., Lindblad-Toh, K., Bekiranov, S., Bailey, D.K., Huebert, D.J., et al. 2005. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell, 120(2): 169-181. doi:10.1016/j.cell.2005.01.001. PMID:15680324.
-
(2005)
Cell
, vol.120
, Issue.2
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
-
14
-
-
0036838096
-
Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo
-
PMID:12370284, doi:10.1128/MCB.22.21.7365-7371.2002
-
Bhaumik, S.R., and Green, M.R. 2002. Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo. Mol. Cell. Biol. 22(21): 7365-7371. doi:10.1128/MCB.22.21.7365-7371.2002. PMID:12370284.
-
(2002)
Mol. Cell. Biol
, vol.22
, Issue.21
, pp. 7365-7371
-
-
Bhaumik, S.R.1
Green, M.R.2
-
15
-
-
0038284360
-
Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin
-
PMID:12782659, doi:10.1101/gad.1056603
-
Boudreault, A.A., Cronier, D., Selleck, W., Lacoste, N., Utley, R.T., Allard, S., et al. 2003. Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin. Genes Dev. 17(11): 1415-1428. doi:10.1101/gad.1056603. PMID:12782659.
-
(2003)
Genes Dev
, vol.17
, Issue.11
, pp. 1415-1428
-
-
Boudreault, A.A.1
Cronier, D.2
Selleck, W.3
Lacoste, N.4
Utley, R.T.5
Allard, S.6
-
16
-
-
0029984469
-
Tetrahymena histone acetyltransferase A: A homolog to yeast Gcn5p linking histone acetylation to gene activation
-
PMID:8601308, doi:10.1016/ S0092-8674(00)81063-6
-
Brownell, J.E., Zhou, J., Ranalli, T., Kobayashi, R., Edmondson, D.G., Roth, S.Y., and Allis, C.D. 1996. Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation. Cell, 84: 843-851. doi:10.1016/ S0092-8674(00)81063-6. PMID:8601308.
-
(1996)
Cell
, vol.84
, pp. 843-851
-
-
Brownell, J.E.1
Zhou, J.2
Ranalli, T.3
Kobayashi, R.4
Edmondson, D.G.5
Roth, S.Y.6
Allis, C.D.7
-
17
-
-
0033231625
-
Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains
-
PMID:10619019, doi:10.1016/S1097-2765(00)80382- 2
-
Cairns, B.R., Schlichter, A., Erdjument-Bromage, H., Tempst, P., Kornberg, R.D., and Winston, F. 1999. Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains. Mol. Cell, 4(5): 715-723. doi:10.1016/S1097-2765(00)80382- 2. PMID:10619019.
-
(1999)
Mol. Cell
, vol.4
, Issue.5
, pp. 715-723
-
-
Cairns, B.R.1
Schlichter, A.2
Erdjument-Bromage, H.3
Tempst, P.4
Kornberg, R.D.5
Winston, F.6
-
18
-
-
33750453345
-
RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymer-ase II elongation
-
PMID:17081996, doi:10.1016/j. molcel.2006.09.012
-
Carey, M., Li, B., and Workman, J.L. 2006. RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymer-ase II elongation. Mol. Cell, 24(3): 481-487. doi:10.1016/j. molcel.2006.09.012. PMID:17081996.
-
(2006)
Mol. Cell
, vol.24
, Issue.3
, pp. 481-487
-
-
Carey, M.1
Li, B.2
Workman, J.L.3
-
19
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
PMID:16286007, doi:10.1016/j. cell.2005.10.023
-
Carrozza, M.J., Li, B., Florens, L., Suganuma, T., Swanson, S.K., Lee, K.K., et al. 2005. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell, 123(4): 581-592. doi:10.1016/j. cell.2005.10.023. PMID:16286007.
-
(2005)
Cell
, vol.123
, Issue.4
, pp. 581-592
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
-
20
-
-
33750370417
-
SWI/SNF displaces SAGA-acetylated nucleosomes. Eu-karyot
-
PMID:17030999, doi:10.1128/EC.00165-06
-
Chandy, M., Gutierrez, J.L., Prochasson, P., and Workman, J.L. 2006. SWI/SNF displaces SAGA-acetylated nucleosomes. Eu-karyot. Cell, 5(10): 1738-1747. doi:10.1128/EC.00165-06. PMID:17030999.
-
(2006)
Cell
, vol.5
, Issue.10
, pp. 1738-1747
-
-
Chandy, M.1
Gutierrez, J.L.2
Prochasson, P.3
Workman, J.L.4
-
21
-
-
0031841947
-
A human RNA polymerase II complex containing factors that modify chromatin structure
-
PMID:9710619
-
Cho, H., Orphanides, G., Sun, X., Yang, X.J., Ogryzko, V., Lees, E., et al. 1998. A human RNA polymerase II complex containing factors that modify chromatin structure. Mol. Cell. Biol. 18(9): 5355-5363. PMID:9710619.
-
(1998)
Mol. Cell. Biol
, vol.18
, Issue.9
, pp. 5355-5363
-
-
Cho, H.1
Orphanides, G.2
Sun, X.3
Yang, X.J.4
Ogryzko, V.5
Lees, E.6
-
22
-
-
0036464569
-
A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI
-
PMID:11809876, doi:10.1093/ nar/30.3.649
-
Clapier, C.R., Nightingale, K.P., and Becker, P.B. 2002. A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI. Nucleic Acids Res. 30(3): 649-655. doi:10.1093/ nar/30.3.649. PMID:11809876.
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.3
, pp. 649-655
-
-
Clapier, C.R.1
Nightingale, K.P.2
Becker, P.B.3
-
23
-
-
33749626224
-
Regulation of ISW2 by concerted action of histone H4 tail and extra-nucleosomal DNA
-
PMID:17015471, doi:10. 1128/MCB.01159-06
-
Dang, W., Kagalwala, M.N., and Bartholomew, B. 2006. Regulation of ISW2 by concerted action of histone H4 tail and extra-nucleosomal DNA. Mol. Cell. Biol. 26(20): 7388-7396. doi:10. 1128/MCB.01159-06. PMID:17015471.
-
(2006)
Mol. Cell. Biol
, vol.26
, Issue.20
, pp. 7388-7396
-
-
Dang, W.1
Kagalwala, M.N.2
Bartholomew, B.3
-
24
-
-
0036307707
-
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 eresolution
-
PMID:12079350, doi:10.1016/S0022-2836(02)00386-8
-
Davey, C.A., Sargent, D.F., Luger, K., Maeder, A.W., and Richmond, T.J. 2002. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 eresolution. J. Mol. Biol. 319(5): 1097-1113. doi:10.1016/S0022-2836(02)00386-8. PMID:12079350.
-
(2002)
J. Mol. Biol
, vol.319
, Issue.5
, pp. 1097-1113
-
-
Davey, C.A.1
Sargent, D.F.2
Luger, K.3
Maeder, A.W.4
Richmond, T.J.5
-
25
-
-
0027944205
-
Synthesis of proteins by native chemical ligation
-
PMID: 7973629, doi:10.1126/science.7973629
-
Dawson, P.E., Muir, T.W., Clark-Lewis, I., and Kent, S.B. 1994. Synthesis of proteins by native chemical ligation. Science, 266(5186): 776-779. doi:10.1126/science.7973629. PMID: 7973629.
-
(1994)
Science
, vol.266
, Issue.5186
, pp. 776-779
-
-
Dawson, P.E.1
Muir, T.W.2
Clark-Lewis, I.3
Kent, S.B.4
-
26
-
-
17244368913
-
Genomic characterization reveals a simple histone H4 acetyla-tion code
-
PMID:15795371, doi:10.1073/pnas.0500136102
-
Dion, M.F., Altschuler, S.J., Wu, L.F., and Rando, O.J. 2005. Genomic characterization reveals a simple histone H4 acetyla-tion code. Proc. Natl. Acad. Sci. U.S.A. 102(15): 5501-5506. doi:10.1073/pnas.0500136102. PMID:15795371.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A
, vol.102
, Issue.15
, pp. 5501-5506
-
-
Dion, M.F.1
Altschuler, S.J.2
Wu, L.F.3
Rando, O.J.4
-
27
-
-
10944267160
-
Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites
-
PMID:15610740, doi:10.1016/j.molcel.2004.12.003
-
Downs, J.A., Allard, S., Jobin-Robitaille, O., Javaheri, A., Auger, A., Bouchard, N., et al. 2004. Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites. Mol. Cell, 16(6): 979-990. doi:10.1016/j.molcel.2004.12.003. PMID:15610740.
-
(2004)
Mol. Cell
, vol.16
, Issue.6
, pp. 979-990
-
-
Downs, J.A.1
Allard, S.2
Jobin-Robitaille, O.3
Javaheri, A.4
Auger, A.5
Bouchard, N.6
-
28
-
-
1942439646
-
The highly conserved and multifunctional NuA4 HAT complex
-
PMID:15196461, doi:10.1016/j.gde. 2004.02.009
-
Doyon, Y., and Cote, J. 2004. The highly conserved and multifunctional NuA4 HAT complex. Curr. Opin. Genet. Dev. 14(2): 147-154. doi:10.1016/j.gde. 2004.02.009. PMID:15196461.
-
(2004)
Curr. Opin. Genet. Dev
, vol.14
, Issue.2
, pp. 147-154
-
-
Doyon, Y.1
Cote, J.2
-
29
-
-
0031769946
-
Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins
-
PMID:9799253
-
Du, J., Nasir, I., Benton, B.K., Kladde, M.P., and Laurent, B.C. 1998. Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins. Genetics, 150(3): 987-1005. PMID:9799253.
-
(1998)
Genetics
, vol.150
, Issue.3
, pp. 987-1005
-
-
Du, J.1
Nasir, I.2
Benton, B.K.3
Kladde, M.P.4
Laurent, B.C.5
-
30
-
-
0032710459
-
The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo
-
PMID:10580001, doi:10.1101/gad.13.22.2940
-
Dudley, A.M., Rougeulle, C., and Winston, F. 1999. The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo. Genes Dev. 13(22): 2940-2945. doi:10.1101/gad.13.22.2940. PMID:10580001.
-
(1999)
Genes Dev
, vol.13
, Issue.22
, pp. 2940-2945
-
-
Dudley, A.M.1
Rougeulle, C.2
Winston, F.3
-
31
-
-
27144533183
-
Two distinct mechanisms of chromatin interaction by the Isw2 chromatin remodeling complex in vivo
-
PMID:16227570, doi:10.1128/MCB.25.21.9165-9174.2005
-
Fazzio, T.G., Gelbart, M.E., and Tsukiyama, T. 2005. Two distinct mechanisms of chromatin interaction by the Isw2 chromatin remodeling complex in vivo. Mol. Cell. Biol. 25(21): 9165-9174. doi:10.1128/MCB.25.21.9165-9174.2005. PMID:16227570.
-
(2005)
Mol. Cell. Biol
, vol.25
, Issue.21
, pp. 9165-9174
-
-
Fazzio, T.G.1
Gelbart, M.E.2
Tsukiyama, T.3
-
32
-
-
35548941098
-
Histone modi- fications influence the action of Snf2 family remodelling enzymes by different mechanisms
-
PMID:17949749, doi:10.1016/j.jmb.2007.09.059
-
Ferreira, H., Flaus, A., and Owen-Hughes, T. 2007. Histone modi- fications influence the action of Snf2 family remodelling enzymes by different mechanisms. J. Mol. Biol. 374(3): 563-579. doi:10.1016/j.jmb.2007.09.059. PMID:17949749.
-
(2007)
J. Mol. Biol
, vol.374
, Issue.3
, pp. 563-579
-
-
Ferreira, H.1
Flaus, A.2
Owen-Hughes, T.3
-
33
-
-
0033634693
-
Multiple links between the NuA4 his-tone acetyltransferase complex and epigenetic control of transcription
-
PMID:10911987, doi:10.1016/S1097-2765(00)80258-0
-
Galarneau, L., Nourani, A., Boudreault, A.A., Zhang, Y., Heliot, L., Allard, S., et al. 2000. Multiple links between the NuA4 his-tone acetyltransferase complex and epigenetic control of transcription. Mol. Cell, 5(6): 927-937. doi:10.1016/S1097-2765(00)80258-0. PMID:10911987.
-
(2000)
Mol. Cell
, vol.5
, Issue.6
, pp. 927-937
-
-
Galarneau, L.1
Nourani, A.2
Boudreault, A.A.3
Zhang, Y.4
Heliot, L.5
Allard, S.6
-
34
-
-
0029046603
-
Modulation of chromatin folding by histone acetylation
-
PMID:7629098, doi:10.1074/jbc.270.30.17923
-
Garcia-Ramirez, M., Rocchini, C., and Ausio, J. 1995. Modulation of chromatin folding by histone acetylation. J. Biol. Chem. 270: 17923-17928. doi:10.1074/jbc.270.30.17923. PMID:7629098.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 17923-17928
-
-
Garcia-Ramirez, M.1
Rocchini, C.2
Ausio, J.3
-
35
-
-
0026783834
-
Two distinct yeast tran-scriptional activators require the function of the GCN5 protein to promote normal levels of transcription
-
PMID:1396595
-
Georgakopoulos, T., and Thireos, G. 1992. Two distinct yeast tran-scriptional activators require the function of the GCN5 protein to promote normal levels of transcription. EMBO J. 11: 4145-4152. PMID:1396595.
-
(1992)
EMBO J
, vol.11
, pp. 4145-4152
-
-
Georgakopoulos, T.1
Thireos, G.2
-
36
-
-
20744437261
-
Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo
-
PMID:15964818, doi:10.1128/MCB.25. 13.5626-5638.2005
-
Govind, C.K., Yoon, S., Qiu, H., Govind, S., and Hinnebusch, A.G. 2005. Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo. Mol. Cell. Biol. 25(13): 5626-5638. doi:10.1128/MCB.25. 13.5626-5638.2005. PMID:15964818.
-
(2005)
Mol. Cell. Biol
, vol.25
, Issue.13
, pp. 5626-5638
-
-
Govind, C.K.1
Yoon, S.2
Qiu, H.3
Govind, S.4
Hinnebusch, A.G.5
-
37
-
-
33845968873
-
Gcn5 promotes acetylation, eviction, and methyla-tion of nucleosomes in transcribed coding regions
-
PMID:17218269, doi:10.1016/j.molcel.2006. 11.020
-
Govind, C.K., Zhang, F., Qiu, H., Hofmeyer, K., and Hinnebusch, A.G. 2007. Gcn5 promotes acetylation, eviction, and methyla-tion of nucleosomes in transcribed coding regions. Mol. Cell, 25(1): 31-42. doi:10.1016/j.molcel.2006. 11.020. PMID:17218269.
-
(2007)
Mol. Cell
, vol.25
, Issue.1
, pp. 31-42
-
-
Govind, C.K.1
Zhang, F.2
Qiu, H.3
Hofmeyer, K.4
Hinnebusch, A.G.5
-
38
-
-
0033605238
-
Expanded lysine acetylation specificity of Gcn5 in native complexes
-
PMID:10026213, doi:10.1074/jbc.274.9.5895
-
Grant, P.A., Eberharter, A., John, S., Cook, R.G., Turner, B.M., and Workman, J.L. 1999. Expanded lysine acetylation specificity of Gcn5 in native complexes. J. Biol. Chem. 274(9): 5895-5900. doi:10.1074/jbc.274.9.5895. PMID:10026213.
-
(1999)
J. Biol. Chem
, vol.274
, Issue.9
, pp. 5895-5900
-
-
Grant, P.A.1
Eberharter, A.2
John, S.3
Cook, R.G.4
Turner, B.M.5
Workman, J.L.6
-
39
-
-
0033571273
-
Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding
-
PMID:10562552, doi:10.1093/emboj/18. 22.6407
-
Gregory, P.D., Schmid, A., Zavari, M., Munsterkotter, M., and Horz, W. 1999. Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding. EMBO J. 18(22): 6407-6414. doi:10.1093/emboj/18. 22.6407. PMID:10562552.
-
(1999)
EMBO J
, vol.18
, Issue.22
, pp. 6407-6414
-
-
Gregory, P.D.1
Schmid, A.2
Zavari, M.3
Munsterkotter, M.4
Horz, W.5
-
40
-
-
0035807901
-
Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF
-
PMID:11724935, doi:10.1073/pnas.251421398
-
Hamiche, A., Kang, J.G., Dennis, C., Xiao, H., and Wu, C. 2001. Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF. Proc. Natl. Acad. Sci. U.S.A. 98(25): 14316-14321. doi:10.1073/pnas.251421398. PMID:11724935.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, Issue.25
, pp. 14316-14321
-
-
Hamiche, A.1
Kang, J.G.2
Dennis, C.3
Xiao, H.4
Wu, C.5
-
41
-
-
0000247720
-
Promoter targeting of chromatin-modifying complexes
-
PMID:11532604, doi:10.2741/Hassan
-
Hassan, A.H., Neely, K.E., Vignali, M., Reese, J.C., and Workman, J.L. 2001a. Promoter targeting of chromatin-modifying complexes. Front. Biosci. 6: D1054-D1064. doi:10.2741/Hassan. PMID:11532604.
-
(2001)
Front. Biosci
, vol.6
-
-
Hassan, A.H.1
Neely, K.E.2
Vignali, M.3
Reese, J.C.4
Workman, J.L.5
-
42
-
-
0035937419
-
Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes
-
PMID:11290320, doi:10.1016/S0092-8674(01)00279-3
-
Hassan, A.H., Neely, K.E., and Workman, J.L. 2001b. Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes. Cell, 104(6): 817-827. doi:10.1016/S0092-8674(01)00279-3. PMID:11290320.
-
(2001)
Cell
, vol.104
, Issue.6
, pp. 817-827
-
-
Hassan, A.H.1
Neely, K.E.2
Workman, J.L.3
-
43
-
-
0036847620
-
Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes
-
doi:10.1016/S0092-8674(02)01005-X.PMID:12419247
-
Hassan, A.H., Prochasson, P., Neely, K.E., Galasinski, S.C., Chandy, M., Carrozza, M.J., and Workman, J.L. 2002. Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes. Cell, 111(3): 369-379. doi:10.1016/S0092-8674(02)01005-X.PMID:12419247.
-
(2002)
Cell
, vol.111
, Issue.3
, pp. 369-379
-
-
Hassan, A.H.1
Prochasson, P.2
Neely, K.E.3
Galasinski, S.C.4
Chandy, M.5
Carrozza, M.J.6
Workman, J.L.7
-
44
-
-
33745885957
-
The Swi2/Snf2 bromodomain is required for the displacement of SAGA and the octamer transfer of SAGA-acetylated nucleosomes
-
PMID:16648632, doi:10.1074/jbc.M602851200
-
Hassan, A.H., Awad, S., and Prochasson, P. 2006. The Swi2/Snf2 bromodomain is required for the displacement of SAGA and the octamer transfer of SAGA-acetylated nucleosomes. J. Biol. Chem. 281(26): 18126-18134. doi:10.1074/jbc.M602851200. PMID:16648632.
-
(2006)
J. Biol. Chem
, vol.281
, Issue.26
, pp. 18126-18134
-
-
Hassan, A.H.1
Awad, S.2
Prochasson, P.3
-
45
-
-
33847082117
-
Selective recognition of acetylated his-tones by bromodomains in transcriptional co-activators
-
PMID: 17049045, doi:10.1042/BJ20060907
-
Hassan, A.H., Awad, S., Al-Natour, Z., Othman, S., Mustafa, F., and Rizvi, T.A. 2007. Selective recognition of acetylated his-tones by bromodomains in transcriptional co-activators. Biochem. J. 402(1): 125-133. doi:10.1042/BJ20060907. PMID: 17049045.
-
(2007)
Biochem. J
, vol.402
, Issue.1
, pp. 125-133
-
-
Hassan, A.H.1
Awad, S.2
Al-Natour, Z.3
Othman, S.4
Mustafa, F.5
Rizvi, T.A.6
-
46
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
PMID:9845373, doi:10.1016/ S0092-8674(00)81641-4
-
Holstege, F.C., Jennings, E.G., Wyrick, J.J., Lee, T.I., Hengartner, C.J., Green, M.R., et al. 1998. Dissecting the regulatory circuitry of a eukaryotic genome. Cell, 95(5): 717-728. doi:10.1016/ S0092-8674(00)81641-4. PMID:9845373.
-
(1998)
Cell
, vol.95
, Issue.5
, pp. 717-728
-
-
Holstege, F.C.1
Jennings, E.G.2
Wyrick, J.J.3
Lee, T.I.4
Hengartner, C.J.5
Green, M.R.6
-
47
-
-
0031952181
-
Nucleosome translational position, not histone acetylation, determines TFIIIA binding to nucleoso-mal Xenopus laevis 5S rRNA genes
-
PMID:9488430
-
Howe, L., and Ausio, J. 1998. Nucleosome translational position, not histone acetylation, determines TFIIIA binding to nucleoso-mal Xenopus laevis 5S rRNA genes. Mol. Cell. Biol. 18(3): 1156-1162. PMID:9488430.
-
(1998)
Mol. Cell. Biol
, vol.18
, Issue.3
, pp. 1156-1162
-
-
Howe, L.1
Ausio, J.2
-
48
-
-
0035577668
-
Histone H3 specific acetyltransferases are essential for cell cycle progression
-
PMID:11731478, doi:10.1101/gad.931401
-
Howe, L., Auston, D., Grant, P., John, S., Cook, R.G., Workman, J.L., and Pillus, L. 2001. Histone H3 specific acetyltransferases are essential for cell cycle progression. Genes Dev. 15(23): 3144-3154. doi:10.1101/gad.931401. PMID:11731478.
-
(2001)
Genes Dev
, vol.15
, Issue.23
, pp. 3144-3154
-
-
Howe, L.1
Auston, D.2
Grant, P.3
John, S.4
Cook, R.G.5
Workman, J.L.6
Pillus, L.7
-
49
-
-
0032909655
-
Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes
-
PMID:9858608
-
Ikeda, K., Steger, D.J., Eberharter, A., and Workman, J.L. 1999. Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes. Mol. Cell. Biol. 19(1): 855-863. PMID:9858608.
-
(1999)
Mol. Cell. Biol
, vol.19
, Issue.1
, pp. 855-863
-
-
Ikeda, K.1
Steger, D.J.2
Eberharter, A.3
Workman, J.L.4
-
50
-
-
0034717183
-
Structure and function of a human TAFII250 double bromodo-main module
-
PMID:10827952, doi:10.1126/ science.288.5470.1422
-
Jacobson, R.H., Ladurner, A.G., King, D.S., and Tjian, R. 2000. Structure and function of a human TAFII250 double bromodo-main module. Science, 288(5470): 1422-1425. doi:10.1126/ science.288.5470.1422. PMID:10827952.
-
(2000)
Science
, vol.288
, Issue.5470
, pp. 1422-1425
-
-
Jacobson, R.H.1
Ladurner, A.G.2
King, D.S.3
Tjian, R.4
-
51
-
-
34948821302
-
Global assessment of combinatorial post-translational modification of core histones in yeast using contemporary mass spectrometry. LYS4 trimethylation correlates with degree of acetylation on the same H3 tail
-
PMID:17652096, doi:10.1074/jbc.M704194200
-
Jiang, L., Smith, J.N., Anderson, S.L., Ma, P., Mizzen, C.A., and Kelleher, N.L. 2007. Global assessment of combinatorial post-translational modification of core histones in yeast using contemporary mass spectrometry. LYS4 trimethylation correlates with degree of acetylation on the same H3 tail. J. Biol. Chem. 282(38): 27923-27934. doi:10.1074/jbc.M704194200. PMID:17652096.
-
(2007)
J. Biol. Chem
, vol.282
, Issue.38
, pp. 27923-27934
-
-
Jiang, L.1
Smith, J.N.2
Anderson, S.L.3
Ma, P.4
Mizzen, C.A.5
Kelleher, N.L.6
-
52
-
-
0034657420
-
The something about silencing protein, Sas3, is the catalytic subunit of NuA3, a yTAF(II)30-containing HAT complex that interacts with the Spt16 subunit of the yeast CP (Cdc68/Pob3)-FACT complex
-
PMID:10817755
-
John, S., Howe, L., Tafrov, S.T., Grant, P.A., Sternglanz, R., and Workman, J.L. 2000. The something about silencing protein, Sas3, is the catalytic subunit of NuA3, a yTAF(II)30-containing HAT complex that interacts with the Spt16 subunit of the yeast CP (Cdc68/Pob3)-FACT complex. Genes Dev. 14(10): 1196-1208. PMID:10817755.
-
(2000)
Genes Dev
, vol.14
, Issue.10
, pp. 1196-1208
-
-
John, S.1
Howe, L.2
Tafrov, S.T.3
Grant, P.A.4
Sternglanz, R.5
Workman, J.L.6
-
53
-
-
1942535223
-
Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14
-
PMID:15014446, doi:10.1038/sj.emboj. 7600143
-
Kasten, M., Szerlong, H., Erdjument-Bromage, H., Tempst, P., Werner, M., and Cairns, B.R. 2004. Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14. EMBO J. 23(6): 1348-1359. doi:10.1038/sj.emboj. 7600143. PMID:15014446.
-
(2004)
EMBO J
, vol.23
, Issue.6
, pp. 1348-1359
-
-
Kasten, M.1
Szerlong, H.2
Erdjument-Bromage, H.3
Tempst, P.4
Werner, M.5
Cairns, B.R.6
-
54
-
-
33847076849
-
Chromatin modifications and their function
-
PMID: 17320507, doi:10.1016/j.cell.2007.02.005
-
Kouzarides, T. 2007. Chromatin modifications and their function. Cell, 128(4): 693-705. doi:10.1016/j.cell.2007.02.005. PMID: 17320507.
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 693-705
-
-
Kouzarides, T.1
-
55
-
-
0036809640
-
Transcriptional inhibition of genes with severe histone h3 hypoacetylation in the coding region
-
PMID:12419235, doi:10.1016/S1097-2765(02) 00647-0
-
Kristjuhan, A., Walker, J., Suka, N., Grunstein, M., Roberts, D., Cairns, B.R., and Svejstrup, J.Q. 2002. Transcriptional inhibition of genes with severe histone h3 hypoacetylation in the coding region. Mol. Cell, 10(4): 925-933. doi:10.1016/S1097-2765(02) 00647-0. PMID:12419235.
-
(2002)
Mol. Cell
, vol.10
, Issue.4
, pp. 925-933
-
-
Kristjuhan, A.1
Walker, J.2
Suka, N.3
Grunstein, M.4
Roberts, D.5
Cairns, B.R.6
Svejstrup, J.Q.7
-
56
-
-
2942518343
-
Mapping global histone acetylation patterns to gene expression
-
PMID:15186774, doi:10.1016/j.cell.2004.05.023
-
Kurdistani, S.K., Tavazoie, S., and Grunstein, M. 2004. Mapping global histone acetylation patterns to gene expression. Cell, 117(6): 721-733. doi:10.1016/j.cell.2004.05.023. PMID:15186774.
-
(2004)
Cell
, vol.117
, Issue.6
, pp. 721-733
-
-
Kurdistani, S.K.1
Tavazoie, S.2
Grunstein, M.3
-
57
-
-
10844233155
-
Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions
-
PMID:15528408, doi:10.1126/science.1103455
-
Kusch, T., Florens, L., Macdonald, W.H., Swanson, S.K., Glaser, R.L., Yates, J.R., 3rd, et al. 2004. Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions. Science, 306(5704): 2084-2087. doi:10.1126/science.1103455. PMID:15528408.
-
(2004)
Science
, vol.306
, Issue.5704
, pp. 2084-2087
-
-
Kusch, T.1
Florens, L.2
Macdonald, W.H.3
Swanson, S.K.4
Glaser, R.L.5
Yates 3rd, J.R.6
-
58
-
-
3543023310
-
Evidence for nucleosome depletion at active regulatory regions genome-wide
-
PMID:15247917, doi:10.1038/ng1400
-
Lee, C.K., Shibata, Y., Rao, B., Strahl, B.D., and Lieb, J.D. 2004. Evidence for nucleosome depletion at active regulatory regions genome-wide. Nat. Genet. 36(8): 900-905. doi:10.1038/ng1400. PMID:15247917.
-
(2004)
Nat. Genet
, vol.36
, Issue.8
, pp. 900-905
-
-
Lee, C.K.1
Shibata, Y.2
Rao, B.3
Strahl, B.D.4
Lieb, J.D.5
-
59
-
-
0027465862
-
A positive role for histone acetylation in transcription factor access to nu-cleosomal DNA
-
PMID:8422685, doi:10.1016/0092-8674(93) 90051-Q
-
Lee, D.Y., Hayes, J.J., Pruss, D., and Wolffe, A.P. 1993. A positive role for histone acetylation in transcription factor access to nu-cleosomal DNA. Cell, 72: 73-84. doi:10.1016/0092-8674(93) 90051-Q. PMID:8422685.
-
(1993)
Cell
, vol.72
, pp. 73-84
-
-
Lee, D.Y.1
Hayes, J.J.2
Pruss, D.3
Wolffe, A.P.4
-
60
-
-
33947532026
-
Histone acetyltransferase complexes: One size doesn't fit all
-
PMID:17380162, doi:10.1038/nrm2145
-
Lee, K.K., and Workman, J.L. 2007. Histone acetyltransferase complexes: one size doesn't fit all. Nat. Rev. Mol. Cell Biol. 8(4): 284-295. doi:10.1038/nrm2145. PMID:17380162.
-
(2007)
Nat. Rev. Mol. Cell Biol
, vol.8
, Issue.4
, pp. 284-295
-
-
Lee, K.K.1
Workman, J.L.2
-
61
-
-
34748826166
-
A high-resolution atlas of nucleo- some occupancy in yeast
-
PMID:17873876, doi:10.1038/ng2117
-
Lee, W., Tillo, D., Bray, N., Morse, R.H., Davis, R.W., Hughes, T.R., and Nislow, C. 2007. A high-resolution atlas of nucleo- some occupancy in yeast. Nat. Genet. 39(10): 1235-1244. doi:10.1038/ng2117. PMID:17873876.
-
(2007)
Nat. Genet
, vol.39
, Issue.10
, pp. 1235-1244
-
-
Lee, W.1
Tillo, D.2
Bray, N.3
Morse, R.H.4
Davis, R.W.5
Hughes, T.R.6
Nislow, C.7
-
62
-
-
34249099730
-
Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin
-
PMID:17510366, doi:10.1126/science.1139004
-
Li, B., Gogol, M., Carey, M., Lee, D., Seidel, C., and Workman, J.L. 2007. Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin. Science, 316(5827): 1050-1054. doi:10.1126/science.1139004. PMID:17510366.
-
(2007)
Science
, vol.316
, Issue.5827
, pp. 1050-1054
-
-
Li, B.1
Gogol, M.2
Carey, M.3
Lee, D.4
Seidel, C.5
Workman, J.L.6
-
63
-
-
2442454683
-
Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome
-
PMID:15123803, doi:10.1073/pnas.0401866101
-
Liang, G., Lin, J.C., Wei, V., Yoo, C., Cheng, J.C., Nguyen, C.T., et al. 2004. Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome. Proc. Natl. Acad. Sci. U.S.A. 101(19): 7357-7362. doi:10.1073/pnas.0401866101. PMID:15123803.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, Issue.19
, pp. 7357-7362
-
-
Liang, G.1
Lin, J.C.2
Wei, V.3
Yoo, C.4
Cheng, J.C.5
Nguyen, C.T.6
-
64
-
-
26444508841
-
Single-nucleosome mapping of histone modifications in S. cerevisiae
-
PMID:16122352, doi:10.1371/journal.pbio.0030328
-
Liu, C.L., Kaplan, T., Kim, M., Buratowski, S., Schreiber, S.L., Friedman, N., and Rando, O.J. 2005. Single-nucleosome mapping of histone modifications in S. cerevisiae. PLoS Biol. 3(10): e328. doi:10.1371/journal.pbio.0030328. PMID:16122352.
-
(2005)
PLoS Biol
, vol.3
, Issue.10
-
-
Liu, C.L.1
Kaplan, T.2
Kim, M.3
Buratowski, S.4
Schreiber, S.L.5
Friedman, N.6
Rando, O.J.7
-
65
-
-
0033596723
-
The core histone N-terminal domains are required for multiple rounds of catalytic chromatin remodeling by the SWI/SNF and RSC complexes
-
PMID:10029546, doi:10.1021/bi982109d
-
Logie, C., Tse, C., Hansen, J.C., and Peterson, C.L. 1999. The core histone N-terminal domains are required for multiple rounds of catalytic chromatin remodeling by the SWI/SNF and RSC complexes. Biochemistry, 38(8): 2514-2522. doi:10.1021/bi982109d. PMID:10029546.
-
(1999)
Biochemistry
, vol.38
, Issue.8
, pp. 2514-2522
-
-
Logie, C.1
Tse, C.2
Hansen, J.C.3
Peterson, C.L.4
-
66
-
-
0035499905
-
Reconstitution of recombinant chromatin establishes a requirement for histone-tail modifications during chromatin assembly and transcription
-
PMID:11691835
-
Loyola, A., LeRoy, G., Wang, Y.H., and Reinberg, D. 2001. Reconstitution of recombinant chromatin establishes a requirement for histone-tail modifications during chromatin assembly and transcription. Genes Dev. 15(21): 2837-2851. PMID:11691835.
-
(2001)
Genes Dev
, vol.15
, Issue.21
, pp. 2837-2851
-
-
Loyola, A.1
LeRoy, G.2
Wang, Y.H.3
Reinberg, D.4
-
67
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 Å resolution
-
PMID:9305837, doi:10.1038/ 38444
-
Luger, K., Mader, A.W., Richmond, R.K., Sargent, D.F., and Richmond, T.J. 1997. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature, 389: 251-260. doi:10.1038/ 38444. PMID:9305837.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
68
-
-
0026697659
-
Histone H3 N-terminal mutations allow hyperactivation of the yeast GAL1 gene in vivo
-
PMID:1505519
-
Mann, R.K., and Grunstein, M. 1992. Histone H3 N-terminal mutations allow hyperactivation of the yeast GAL1 gene in vivo. EMBO J. 11(9): 3297-3306. PMID:1505519.
-
(1992)
EMBO J
, vol.11
, Issue.9
, pp. 3297-3306
-
-
Mann, R.K.1
Grunstein, M.2
-
69
-
-
33750328340
-
The Yng1p plant homeodomain finger is a methyl-histone binding module that recognizes lysine 4-methylated histone H3
-
PMID:16923967, doi:10.1128/MCB.00573-06
-
Martin, D.G., Baetz, K., Shi, X., Walter, K.L., MacDonald, V.E., Wlodarski, M.J., et al. 2006. The Yng1p plant homeodomain finger is a methyl-histone binding module that recognizes lysine 4-methylated histone H3. Mol. Cell. Biol. 26(21): 7871-7879. doi:10.1128/MCB.00573-06. PMID:16923967.
-
(2006)
Mol. Cell. Biol
, vol.26
, Issue.21
, pp. 7871-7879
-
-
Martin, D.G.1
Baetz, K.2
Shi, X.3
Walter, K.L.4
MacDonald, V.E.5
Wlodarski, M.J.6
-
70
-
-
22444448143
-
A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response
-
PMID:16015338, doi:10.1038/nature03714
-
Masumoto, H., Hawke, D., Kobayashi, R., and Verreault, A. 2005. A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response. Nature, 436(7048): 294-298. doi:10.1038/nature03714. PMID:16015338.
-
(2005)
Nature
, vol.436
, Issue.7048
, pp. 294-298
-
-
Masumoto, H.1
Hawke, D.2
Kobayashi, R.3
Verreault, A.4
-
71
-
-
0033826515
-
Role of histone N-terminal tails and their acetylation in nucleosome dynamics
-
PMID:10982840, doi:10.1128/MCB.20.19.7230-7237. 2000
-
Morales, V., and Richard-Foy, H. 2000. Role of histone N-terminal tails and their acetylation in nucleosome dynamics. Mol. Cell. Biol. 20(19): 7230-7237. doi:10.1128/MCB.20.19.7230-7237. 2000. PMID:10982840.
-
(2000)
Mol. Cell. Biol
, vol.20
, Issue.19
, pp. 7230-7237
-
-
Morales, V.1
Richard-Foy, H.2
-
72
-
-
34547858913
-
Structure and acetyl-lysine recognition of the bromodomain
-
PMID:17694091, doi:10.1038/sj.onc.1210618
-
Mujtaba, S., Zeng, L., and Zhou, M.M. 2007. Structure and acetyl-lysine recognition of the bromodomain. Oncogene, 26(37): 5521-5527. doi:10.1038/sj.onc.1210618. PMID:17694091.
-
(2007)
Oncogene
, vol.26
, Issue.37
, pp. 5521-5527
-
-
Mujtaba, S.1
Zeng, L.2
Zhou, M.M.3
-
73
-
-
10644280152
-
Multivalency in supramolecular chemistry and nanofabrication
-
PMID: 15565230, doi:10.1039/b413971b
-
Mulder, A., Huskens, J., and Reinhoudt, D.N. 2004. Multivalency in supramolecular chemistry and nanofabrication. Org. Biomol. Chem. 2(23): 3409-3424. doi:10.1039/b413971b. PMID: 15565230.
-
(2004)
Org. Biomol. Chem
, vol.2
, Issue.23
, pp. 3409-3424
-
-
Mulder, A.1
Huskens, J.2
Reinhoudt, D.N.3
-
74
-
-
0031741231
-
Persistent interactions of core histone tails with nucleosomal DNA following acetylation and transcription factor binding
-
PMID:9774646
-
Mutskov, V., Gerber, D., Angelov, D., Ausio, J., Workman, J., and Dimitrov, S. 1998. Persistent interactions of core histone tails with nucleosomal DNA following acetylation and transcription factor binding. Mol. Cell. Biol. 18(11): 6293-6304. PMID:9774646.
-
(1998)
Mol. Cell. Biol
, vol.18
, Issue.11
, pp. 6293-6304
-
-
Mutskov, V.1
Gerber, D.2
Angelov, D.3
Ausio, J.4
Workman, J.5
Dimitrov, S.6
-
75
-
-
0032525139
-
Histone acetylation facilitates RNA polymerase II transcription of the Drosophila hsp26 gene in chromatin
-
PMID:9582280, doi:10.1093/emboj/17.10.2865
-
Nightingale, K.P., Wellinger, R.E., Sogo, J.M., and Becker, P.B. 1998. Histone acetylation facilitates RNA polymerase II transcription of the Drosophila hsp26 gene in chromatin. EMBO J. 17: 2865-2876. doi:10.1093/emboj/17.10.2865. PMID:9582280.
-
(1998)
EMBO J
, vol.17
, pp. 2865-2876
-
-
Nightingale, K.P.1
Wellinger, R.E.2
Sogo, J.M.3
Becker, P.B.4
-
76
-
-
3342979659
-
Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation
-
PMID:15175650, doi:10. 1038/sj.emboj.7600230
-
Nourani, A., Utley, R.T., Allard, S., and Cote, J. 2004. Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation. EMBO J. 23(13): 2597-2607. doi:10. 1038/sj.emboj.7600230. PMID:15175650.
-
(2004)
EMBO J
, vol.23
, Issue.13
, pp. 2597-2607
-
-
Nourani, A.1
Utley, R.T.2
Allard, S.3
Cote, J.4
-
77
-
-
22544441929
-
Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae
-
PMID:15888442, doi:10.1074/jbc.C500181200
-
Ozdemir, A., Spicuglia, S., Lasonder, E., Vermeulen, M., Campsteijn, C., Stunnenberg, H.G., and Logie, C. 2005. Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae. J. Biol. Chem. 280(28): 25949-25952. doi:10.1074/jbc.C500181200. PMID:15888442.
-
(2005)
J. Biol. Chem
, vol.280
, Issue.28
, pp. 25949-25952
-
-
Ozdemir, A.1
Spicuglia, S.2
Lasonder, E.3
Vermeulen, M.4
Campsteijn, C.5
Stunnenberg, H.G.6
Logie, C.7
-
78
-
-
33846862405
-
High-throughput mapping of the chromatin structure of human promoters
-
PMID:17220878, doi:10.1038/nbt1279
-
Ozsolak, F., Song, J.S., Liu, X.S., and Fisher, D.E. 2007. High-throughput mapping of the chromatin structure of human promoters. Nat. Biotechnol. 25(2): 244-248. doi:10.1038/nbt1279. PMID:17220878.
-
(2007)
Nat. Biotechnol
, vol.25
, Issue.2
, pp. 244-248
-
-
Ozsolak, F.1
Song, J.S.2
Liu, X.S.3
Fisher, D.E.4
-
79
-
-
23944462969
-
Genome-wide map of nucleosome acetylation and methylation in yeast
-
PMID:16122420, doi:10.1016/j.cell.2005.06.026
-
Pokholok, D.K., Harbison, C.T., Levine, S., Cole, M., Hannett, N.M., Lee, T.I., et al. 2005. Genome-wide map of nucleosome acetylation and methylation in yeast. Cell, 122(4): 517-527. doi:10.1016/j.cell.2005.06.026. PMID:16122420.
-
(2005)
Cell
, vol.122
, Issue.4
, pp. 517-527
-
-
Pokholok, D.K.1
Harbison, C.T.2
Levine, S.3
Cole, M.4
Hannett, N.M.5
Lee, T.I.6
-
80
-
-
13444267442
-
Chd1 chromodomain links histone H3 methyl-ation with SAGA- and SLIK-dependent acetylation
-
PMID:15647753, doi:10.1038/nature03242
-
Pray-Grant, M.G., Daniel, J.A., Schieltz, D., Yates, J.R., 3rd, and Grant, P.A. 2005. Chd1 chromodomain links histone H3 methyl-ation with SAGA- and SLIK-dependent acetylation. Nature, 433(7024): 434-438. doi:10.1038/nature03242. PMID:15647753.
-
(2005)
Nature
, vol.433
, Issue.7024
, pp. 434-438
-
-
Pray-Grant, M.G.1
Daniel, J.A.2
Schieltz, D.3
Yates 3rd, J.R.4
Grant, P.A.5
-
81
-
-
2942594663
-
An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p
-
PMID:15121833, doi:10.1128/MCB.24.10.4104-4117.2004
-
Qiu, H., Hu, C., Yoon, S., Natarajan, K., Swanson, M.J., and Hinnebusch, A.G. 2004. An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p. Mol. Cell. Biol. 24(10): 4104-4117. doi:10.1128/MCB.24.10.4104-4117.2004. PMID:15121833.
-
(2004)
Mol. Cell. Biol
, vol.24
, Issue.10
, pp. 4104-4117
-
-
Qiu, H.1
Hu, C.2
Yoon, S.3
Natarajan, K.4
Swanson, M.J.5
Hinnebusch, A.G.6
-
82
-
-
0032076568
-
A trivalent system from vancomycin.D-ala-D-Ala with higher affinity than avidin.biotin
-
PMID:9563940, doi:10.1126/science.280.5364. 708
-
Rao, J., Lahiri, J., Isaacs, L., Weis, R.M., and Whitesides, G.M. 1998. A trivalent system from vancomycin.D-ala-D-Ala with higher affinity than avidin.biotin. Science, 280(5364): 708-711. doi:10.1126/science.280.5364. 708. PMID:9563940.
-
(1998)
Science
, vol.280
, Issue.5364
, pp. 708-711
-
-
Rao, J.1
Lahiri, J.2
Isaacs, L.3
Weis, R.M.4
Whitesides, G.M.5
-
83
-
-
6344270167
-
Global position and recruitment of HATs and HDACs in the yeast genome
-
PMID:15494307, doi:10.1016/j.molcel.2004.09. 021
-
Robert, F., Pokholok, D.K., Hannett, N.M., Rinaldi, N.J., Chandy, M., Rolfe, A., et al. 2004. Global position and recruitment of HATs and HDACs in the yeast genome. Mol. Cell, 16(2): 199-209. doi:10.1016/j.molcel.2004.09. 021. PMID:15494307.
-
(2004)
Mol. Cell
, vol.16
, Issue.2
, pp. 199-209
-
-
Robert, F.1
Pokholok, D.K.2
Hannett, N.M.3
Rinaldi, N.J.4
Chandy, M.5
Rolfe, A.6
-
84
-
-
39549110425
-
The Sas3p and Gcn5p histone acetyltransferases are recruited to similar genes
-
PMID:17584493, doi:10.1186/gb-2007- 8-6-r119
-
Rosaleny, L.E., Ruiz-Garcia, A.B., Garcia-Martinez, J., Perez-Ortin, J.E., and Tordera, V. 2007. The Sas3p and Gcn5p histone acetyltransferases are recruited to similar genes. Genome Biol. 8(6): R119. doi:10.1186/gb-2007- 8-6-r119. PMID:17584493.
-
(2007)
Genome Biol
, vol.8
, Issue.6
-
-
Rosaleny, L.E.1
Ruiz-Garcia, A.B.2
Garcia-Martinez, J.3
Perez-Ortin, J.E.4
Tordera, V.5
-
85
-
-
38049058283
-
Specificity and mobility of biomacromolecular, mul-tivalent constructs for cellular targeting
-
PMID:18039007, doi:10.1021/bm700791a
-
Rosca, E.V., Stukel, J.M., Gillies, R.J., Vagner, J., and Caplan, M.R. 2007. Specificity and mobility of biomacromolecular, mul-tivalent constructs for cellular targeting. Biomacromolecules, 8(12): 3830-3835. doi:10.1021/bm700791a. PMID:18039007.
-
(2007)
Biomacromolecules
, vol.8
, Issue.12
, pp. 3830-3835
-
-
Rosca, E.V.1
Stukel, J.M.2
Gillies, R.J.3
Vagner, J.4
Caplan, M.R.5
-
86
-
-
36448949026
-
Multi-valent engagement of chromatin modifications by linked binding modules
-
PMID:18037899, doi:10.1038/ nrm2298
-
Ruthenburg, A.J., Li, H., Patel, D.J., and Allis, C.D. 2007. Multi-valent engagement of chromatin modifications by linked binding modules. Nat. Rev. Mol. Cell Biol. 8(12): 983-994. doi:10.1038/ nrm2298. PMID:18037899.
-
(2007)
Nat. Rev. Mol. Cell Biol
, vol.8
, Issue.12
, pp. 983-994
-
-
Ruthenburg, A.J.1
Li, H.2
Patel, D.J.3
Allis, C.D.4
-
87
-
-
2642570305
-
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote
-
PMID:15175259, doi:10.1101/gad.1198204
-
Schubeler, D., MacAlpine, D.M., Scalzo, D., Wirbelauer, C., Kooperberg, C., van Leeuwen, F., et al. 2004. The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. Genes Dev. 18(11): 1263-1271. doi:10.1101/gad.1198204. PMID:15175259.
-
(2004)
Genes Dev
, vol.18
, Issue.11
, pp. 1263-1271
-
-
Schubeler, D.1
MacAlpine, D.M.2
Scalzo, D.3
Wirbelauer, C.4
Kooperberg, C.5
van Leeuwen, F.6
-
88
-
-
0030742748
-
Translational diffusion of macromolecule-sized solutes in cytoplasm and nucleus
-
PMID:9214387, doi:10.1083/jcb.138.1.131
-
Seksek, O., Biwersi, J., and Verkman, A.S. 1997. Translational diffusion of macromolecule-sized solutes in cytoplasm and nucleus. J. Cell Biol. 138(1): 131-142. doi:10.1083/jcb.138.1.131. PMID:9214387.
-
(1997)
J. Cell Biol
, vol.138
, Issue.1
, pp. 131-142
-
-
Seksek, O.1
Biwersi, J.2
Verkman, A.S.3
-
89
-
-
20744445493
-
The Saccharomyces cerevisiae Piccolo NuA4 histone acetyltransferase complex requires the Enhancer of Polycomb A domain and chromodomain to acetylate nucleosomes
-
PMID:15964809, doi:10.1128/MCB.25.13. 5535-5542
-
Selleck, W., Fortin, I., Sermwittayawong, D., Cote, J., and Tan, S. 2005. The Saccharomyces cerevisiae Piccolo NuA4 histone acetyltransferase complex requires the Enhancer of Polycomb A domain and chromodomain to acetylate nucleosomes. Mol. Cell. Biol. 25(13): 5535-5542. doi:10.1128/MCB.25.13. 5535-5542. 2005. PMID:15964809.
-
(2005)
Mol. Cell. Biol
, vol.25
, Issue.13
, pp. 5535-5542
-
-
Selleck, W.1
Fortin, I.2
Sermwittayawong, D.3
Cote, J.4
Tan, S.5
-
90
-
-
0042671282
-
Involvement of actin-related proteins in ATP-dependent chromatin remodeling
-
PMID:12887900, doi:10.1016/S1097-2765(03)00264-8
-
Shen, X., Ranallo, R., Choi, E., and Wu, C. 2003. Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol. Cell, 12(1): 147-155. doi:10.1016/S1097-2765(03)00264-8. PMID:12887900.
-
(2003)
Mol. Cell
, vol.12
, Issue.1
, pp. 147-155
-
-
Shen, X.1
Ranallo, R.2
Choi, E.3
Wu, C.4
-
91
-
-
33745868054
-
ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression
-
PMID:16728974
-
Shi, X., Hong, T., Walter, K.L., Ewalt, M., Michishita, E., Hung, T., et al. 2006. ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature, 442(7098): 96-99. PMID:16728974.
-
(2006)
Nature
, vol.442
, Issue.7098
, pp. 96-99
-
-
Shi, X.1
Hong, T.2
Walter, K.L.3
Ewalt, M.4
Michishita, E.5
Hung, T.6
-
92
-
-
32444434989
-
Histone H4-K16 acetylation controls chromatin structure and protein interactions
-
PMID: 16469925, doi:10.1126/science. 1124000
-
Shogren-Knaak, M., Ishii, H., Sun, J.M., Pazin, M.J., Davie, J.R., and Peterson, C.L. 2006. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science, 311(5762): 844-847. doi:10.1126/science. 1124000. PMID: 16469925.
-
(2006)
Science
, vol.311
, Issue.5762
, pp. 844-847
-
-
Shogren-Knaak, M.1
Ishii, H.2
Sun, J.M.3
Pazin, M.J.4
Davie, J.R.5
Peterson, C.L.6
-
93
-
-
0037459150
-
Effect of DNA length and H4 acetylation on the thermal stability of reconstituted nucleosome particles
-
PMID:12646255, doi:10.1016/S0006-291X(03)00277-8
-
Siino, J.S., Yau, P.M., Imai, B.S., Gatewood, J.M., and Bradbury, E.M. 2003. Effect of DNA length and H4 acetylation on the thermal stability of reconstituted nucleosome particles. Biochem. Biophys. Res. Commun. 302(4): 885-891. doi:10.1016/S0006-291X(03)00277-8. PMID:12646255.
-
(2003)
Biochem. Biophys. Res. Commun
, vol.302
, Issue.4
, pp. 885-891
-
-
Siino, J.S.1
Yau, P.M.2
Imai, B.S.3
Gatewood, J.M.4
Bradbury, E.M.5
-
94
-
-
0018086146
-
Structure of chromatin containing extensively acetylated H3 and H4
-
PMID:657272, doi:10.1016/0092-8674(78) 90219-2
-
Simpson, R.T. 1978. Structure of chromatin containing extensively acetylated H3 and H4. Cell, 13(4): 691-699. doi:10.1016/0092-8674(78) 90219-2. PMID:657272.
-
(1978)
Cell
, vol.13
, Issue.4
, pp. 691-699
-
-
Simpson, R.T.1
-
95
-
-
34547397533
-
Structural ramification for acetyl-lysine recognition by the bro-modomain of human BRG1 protein, a central ATPase of the SWI/SNF remodeling complex
-
PMID:17582821, doi:10.1002/cbic.200600562
-
Singh, M., Popowicz, G.M., Krajewski, M., and Holak, T.A. 2007. Structural ramification for acetyl-lysine recognition by the bro-modomain of human BRG1 protein, a central ATPase of the SWI/SNF remodeling complex. ChemBioChem, 8(11): 1308-1316. doi:10.1002/cbic.200600562. PMID:17582821.
-
(2007)
ChemBioChem
, vol.8
, Issue.11
, pp. 1308-1316
-
-
Singh, M.1
Popowicz, G.M.2
Krajewski, M.3
Holak, T.A.4
-
96
-
-
0032573167
-
Purified histone acetyltransferase complexes stimulate HIV-1 transcription from preassembled nucleosomal arrays
-
PMID:9789016, doi:10. 1073/pnas.95.22.12924
-
Steger, D.J., Eberharter, A., John, S., Grant, P.A., and Workman, J.L. 1998. Purified histone acetyltransferase complexes stimulate HIV-1 transcription from preassembled nucleosomal arrays. Proc. Natl. Acad. Sci. U.S.A. 95(22): 12924-12929. doi:10. 1073/pnas.95.22.12924. PMID:9789016.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A
, vol.95
, Issue.22
, pp. 12924-12929
-
-
Steger, D.J.1
Eberharter, A.2
John, S.3
Grant, P.A.4
Workman, J.L.5
-
97
-
-
0034610814
-
The language of covalent his-tone modifications
-
PMID:10638745, doi:10.1038/ 47412
-
Strahl, B.D., and Allis, C.D. 2000. The language of covalent his-tone modifications. Nature, 403(6765): 41-45. doi:10.1038/ 47412. PMID:10638745.
-
(2000)
Nature
, vol.403
, Issue.6765
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
98
-
-
33751527233
-
Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
-
PMID:17157260, doi:10. 1016/j.molcel.2006.10.026
-
Taverna, S.D., Ilin, S., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., et al. 2006. Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs. Mol. Cell, 24(5): 785-796. doi:10. 1016/j.molcel.2006.10.026. PMID:17157260.
-
(2006)
Mol. Cell
, vol.24
, Issue.5
, pp. 785-796
-
-
Taverna, S.D.1
Ilin, S.2
Rogers, R.S.3
Tanny, J.C.4
Lavender, H.5
Li, H.6
-
99
-
-
32344434540
-
Chromatin compaction at the mononucleosome level
-
PMID:16460006, doi:10.1021/bi052110u
-
Toth, K., Brun, N., and Langowski, J. 2006. Chromatin compaction at the mononucleosome level. Biochemistry, 45(6): 1591-1598. doi:10.1021/bi052110u. PMID:16460006.
-
(2006)
Biochemistry
, vol.45
, Issue.6
, pp. 1591-1598
-
-
Toth, K.1
Brun, N.2
Langowski, J.3
-
100
-
-
0031876314
-
Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymer-ase III
-
PMID:9671473
-
Tse, C., Sera, T., Wolffe, A.P., and Hansen, J.C. 1998. Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymer-ase III. Mol. Cell. Biol. 18(8): 4629-4638. PMID:9671473.
-
(1998)
Mol. Cell. Biol
, vol.18
, Issue.8
, pp. 4629-4638
-
-
Tse, C.1
Sera, T.2
Wolffe, A.P.3
Hansen, J.C.4
-
101
-
-
0027525056
-
Decoding the nucleosome
-
PMID:8402900
-
Turner, B.M. 1993. Decoding the nucleosome. Cell, 75: 5-8. PMID:8402900.
-
(1993)
Cell
, vol.75
, pp. 5-8
-
-
Turner, B.M.1
-
102
-
-
0030756675
-
Induced alpha helix in the VP16 activation domain upon binding to a human TAF
-
PMID:9271577, doi:10.1126/science.277.5330.1310
-
Uesugi, M., Nyanguile, O., Lu, H., Levine, A.J., and Verdine, G.L. 1997. Induced alpha helix in the VP16 activation domain upon binding to a human TAF. Science, 277(5330): 1310-1313. doi:10.1126/science.277.5330.1310. PMID:9271577.
-
(1997)
Science
, vol.277
, Issue.5330
, pp. 1310-1313
-
-
Uesugi, M.1
Nyanguile, O.2
Lu, H.3
Levine, A.J.4
Verdine, G.L.5
-
103
-
-
0030998534
-
Histone acetylation: Influence on transcription, nu-cleosome mobility and positioning, and linker histone-dependent transcriptional repression
-
PMID:9155035, doi:10. 1093/emboj/16.8.2096
-
Ura, K., Kurumizaka, H., Dimitrov, S., Almouzni, G., and Wolffe, A.P. 1997. Histone acetylation: influence on transcription, nu-cleosome mobility and positioning, and linker histone-dependent transcriptional repression. EMBO J. 16(8): 2096-2107. doi:10. 1093/emboj/16.8.2096. PMID:9155035.
-
(1997)
EMBO J
, vol.16
, Issue.8
, pp. 2096-2107
-
-
Ura, K.1
Kurumizaka, H.2
Dimitrov, S.3
Almouzni, G.4
Wolffe, A.P.5
-
104
-
-
0032581751
-
Transcriptional activators direct histone acetyl-transferase complexes to nucleosomes
-
PMID:9697775, doi:10.1038/28886
-
Utley, R.T., Ikeda, K., Grant, P.A., Côté, J., Steger, D.J., Eberharter, A., et al. 1998. Transcriptional activators direct histone acetyl-transferase complexes to nucleosomes. Nature, 394(6692): 498-502. doi:10.1038/28886. PMID:9697775.
-
(1998)
Nature
, vol.394
, Issue.6692
, pp. 498-502
-
-
Utley, R.T.1
Ikeda, K.2
Grant, P.A.3
Côté, J.4
Steger, D.J.5
Eberharter, A.6
-
105
-
-
0003903126
-
-
Springer-Verlag, New York
-
van Holde, K.E. 1988. Chromatin. Springer-Verlag, New York.
-
(1988)
Chromatin
-
-
van Holde, K.E.1
-
106
-
-
35648930403
-
Chromatin fiber structure: Where is the problem now?
-
PMID:17905614, doi:10.1016/j.semcdb.2007.08.005
-
van Holde, K., and Zlatanova, J. 2007. Chromatin fiber structure: Where is the problem now? Semin. Cell Dev. Biol. 18(5): 651-658. doi:10.1016/j.semcdb.2007.08.005. PMID:17905614.
-
(2007)
Semin. Cell Dev. Biol
, vol.18
, Issue.5
, pp. 651-658
-
-
van Holde, K.1
Zlatanova, J.2
-
107
-
-
34547875013
-
NAD+-dependent deacetylation of H4 lysine 16 by class III HDACs
-
PMID:17694090, doi:10.1038/sj.onc.1210617
-
Vaquero, A., Sternglanz, R., and Reinberg, D. 2007. NAD+-dependent deacetylation of H4 lysine 16 by class III HDACs. Oncogene, 26(37): 5505-5520. doi:10.1038/sj.onc.1210617. PMID:17694090.
-
(2007)
Oncogene
, vol.26
, Issue.37
, pp. 5505-5520
-
-
Vaquero, A.1
Sternglanz, R.2
Reinberg, D.3
-
108
-
-
0036164351
-
Solute and macromolecule diffusion in cellu- lar aqueous compartments
-
PMID:11796221, doi:10.1016/S0968-0004(01)02003-5
-
Verkman, A.S. 2002. Solute and macromolecule diffusion in cellu- lar aqueous compartments. Trends Biochem. Sci. 27(1): 27-33. doi:10.1016/S0968-0004(01)02003-5. PMID:11796221.
-
(2002)
Trends Biochem. Sci
, vol.27
, Issue.1
, pp. 27-33
-
-
Verkman, A.S.1
-
109
-
-
0029985730
-
Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro
-
PMID:8665858
-
Vettese-Dadey, M., Grant, P.A., Hebbes, T.R., Crane-Robinson, C., Allis, C.D., and Workman, J.L. 1996. Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro. EMBO J. 15(10): 2508-2518. PMID:8665858.
-
(1996)
EMBO J
, vol.15
, Issue.10
, pp. 2508-2518
-
-
Vettese-Dadey, M.1
Grant, P.A.2
Hebbes, T.R.3
Crane-Robinson, C.4
Allis, C.D.5
Workman, J.L.6
-
110
-
-
0034707037
-
Global histone acetylation and deacetylation in yeast
-
PMID:11100734, doi:10.1038/35044127
-
Vogelauer, M., Wu, J., Suka, N., and Grunstein, M. 2000. Global histone acetylation and deacetylation in yeast. Nature, 408(6811): 495-498. doi:10.1038/35044127. PMID:11100734.
-
(2000)
Nature
, vol.408
, Issue.6811
, pp. 495-498
-
-
Vogelauer, M.1
Wu, J.2
Suka, N.3
Grunstein, M.4
-
111
-
-
0034634558
-
Acetyl-ation increases the alpha-helical content of the histone tails of the nucleosome
-
PMID:10938086, doi:10. 1074/jbc.M004998200
-
Wang, X., Moore, S.C., Laszckzak, M., and Ausio, J. 2000. Acetyl-ation increases the alpha-helical content of the histone tails of the nucleosome. J. Biol. Chem. 275(45): 35013-35020. doi:10. 1074/jbc.M004998200. PMID:10938086.
-
(2000)
J. Biol. Chem
, vol.275
, Issue.45
, pp. 35013-35020
-
-
Wang, X.1
Moore, S.C.2
Laszckzak, M.3
Ausio, J.4
-
112
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
PMID:18552846, doi:10.1038/ng.154
-
Wang, Z., Zang, C., Rosenfeld, J.A., Schones, D.E., Barski, A., Cuddapah, S., et al. 2008. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat. Genet. 40(7): 897-903. doi:10.1038/ng.154. PMID:18552846.
-
(2008)
Nat. Genet
, vol.40
, Issue.7
, pp. 897-903
-
-
Wang, Z.1
Zang, C.2
Rosenfeld, J.A.3
Schones, D.E.4
Barski, A.5
Cuddapah, S.6
-
113
-
-
0017798614
-
Complexes of DNA with arginine-rich and slightly ly-sine-rich histones. Transcription and electron microscopy. Bio-chim
-
PMID:629975
-
Weihe, A., von Mickwitz, C.U., Grade, K., and Lindigkeit, R. 1978. Complexes of DNA with arginine-rich and slightly ly-sine-rich histones. Transcription and electron microscopy. Bio-chim. Biophys. Acta, 518(1): 172-176. PMID:629975.
-
(1978)
Biophys. Acta
, vol.518
, Issue.1
, pp. 172-176
-
-
Weihe, A.1
von Mickwitz, C.U.2
Grade, K.3
Lindigkeit, R.4
-
114
-
-
9144246231
-
Members of the SAGA and Mediator complexes are partners of the transcription elongation factor TFIIS
-
PMID:15359273, doi:10. 1038/sj.emboj.7600326
-
Wery, M., Shematorova, E., Van Driessche, B., Vandenhaute, J., Thuriaux, P., and Van Mullem, V. 2004. Members of the SAGA and Mediator complexes are partners of the transcription elongation factor TFIIS. EMBO J. 23(21): 4232-4242. doi:10. 1038/sj.emboj.7600326. PMID:15359273.
-
(2004)
EMBO J
, vol.23
, Issue.21
, pp. 4232-4242
-
-
Wery, M.1
Shematorova, E.2
Van Driessche, B.3
Vandenhaute, J.4
Thuriaux, P.5
Van Mullem, V.6
-
115
-
-
33745847547
-
Antagonistic forces that position nucleosomes in vivo
-
PMID:16819518, doi:10.1038/nsmb1111
-
Whitehouse, I., and Tsukiyama, T. 2006. Antagonistic forces that position nucleosomes in vivo. Nat. Struct. Mol. Biol. 13(7): 633-640. doi:10.1038/nsmb1111. PMID:16819518.
-
(2006)
Nat. Struct. Mol. Biol
, vol.13
, Issue.7
, pp. 633-640
-
-
Whitehouse, I.1
Tsukiyama, T.2
-
116
-
-
37249077649
-
Chromatin remodelling at promoters suppresses antisense transcription
-
PMID:18075583, doi:10.1038/ nature06391
-
Whitehouse, I., Rando, O.J., Delrow, J., and Tsukiyama, T. 2007. Chromatin remodelling at promoters suppresses antisense transcription. Nature, 450(7172): 1031-1035. doi:10.1038/ nature06391. PMID:18075583.
-
(2007)
Nature
, vol.450
, Issue.7172
, pp. 1031-1035
-
-
Whitehouse, I.1
Rando, O.J.2
Delrow, J.3
Tsukiyama, T.4
-
117
-
-
0033166761
-
A novel histone acet-yltransferase is an integral subunit of elongating RNA polymerase II holoenzyme
-
PMID:10445034, doi:10. 1016/S1097-2765(00)80194-X
-
Wittschieben, B.O., Otero, G., de Bizemont, T., Fellows, J., Erdju-ment-Bromage, H., Ohba, R., et al. 1999. A novel histone acet-yltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Mol. Cell, 4(1): 123-128. doi:10. 1016/S1097-2765(00)80194-X. PMID:10445034.
-
(1999)
Mol. Cell
, vol.4
, Issue.1
, pp. 123-128
-
-
Wittschieben, B.O.1
Otero, G.2
de Bizemont, T.3
Fellows, J.4
Erdju-ment-Bromage, H.5
Ohba, R.6
-
118
-
-
0034660330
-
Overlapping roles for the histone acetyl-transferase activities of SAGA and elongator in vivo
-
PMID: 10856249, doi:10.1093/emboj/19.12.3060
-
Wittschieben, B.O., Fellows, J., Du, W., Stillman, D.J., and Svejstrup, J.Q. 2000. Overlapping roles for the histone acetyl-transferase activities of SAGA and elongator in vivo. EMBO J. 19(12): 3060-3068. doi:10.1093/emboj/19.12.3060. PMID: 10856249.
-
(2000)
EMBO J
, vol.19
, Issue.12
, pp. 3060-3068
-
-
Wittschieben, B.O.1
Fellows, J.2
Du, W.3
Stillman, D.J.4
Svejstrup, J.Q.5
-
119
-
-
0029739903
-
Quantitation of putative activator-target affinities predicts transcriptional activating potentials
-
PMID:8670900
-
Wu, Y., Reece, R.J., and Ptashne, M. 1996. Quantitation of putative activator-target affinities predicts transcriptional activating potentials. EMBO J. 15(15): 3951-3963. PMID:8670900.
-
(1996)
EMBO J
, vol.15
, Issue.15
, pp. 3951-3963
-
-
Wu, Y.1
Reece, R.J.2
Ptashne, M.3
-
120
-
-
20444417108
-
WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development
-
PMID:15960974, doi:10. 1016/j.cell.2005.03.036
-
Wysocka, J., Swigut, T., Milne, T.A., Dou, Y., Zhang, X., Burlingame, A.L., et al. 2005. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell, 121(6): 859-872. doi:10. 1016/j.cell.2005.03.036. PMID:15960974.
-
(2005)
Cell
, vol.121
, Issue.6
, pp. 859-872
-
-
Wysocka, J.1
Swigut, T.2
Milne, T.A.3
Dou, Y.4
Zhang, X.5
Burlingame, A.L.6
-
121
-
-
33745839365
-
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
-
PMID:16728976
-
Wysocka, J., Swigut, T., Xiao, H., Milne, T.A., Kwon, S.Y., Landry, J., et al. 2006. A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature, 442(7098): 86-90. PMID:16728976.
-
(2006)
Nature
, vol.442
, Issue.7098
, pp. 86-90
-
-
Wysocka, J.1
Swigut, T.2
Xiao, H.3
Milne, T.A.4
Kwon, S.Y.5
Landry, J.6
-
122
-
-
18844413266
-
Acetylation in histone H3 globular domain regulates gene expression in yeast
-
PMID:15882620, doi:10.1016/j.cell.2005.03.011
-
Xu, F., Zhang, K., and Grunstein, M. 2005. Acetylation in histone H3 globular domain regulates gene expression in yeast. Cell, 121(3): 375-385. doi:10.1016/j.cell.2005.03.011. PMID:15882620.
-
(2005)
Cell
, vol.121
, Issue.3
, pp. 375-385
-
-
Xu, F.1
Zhang, K.2
Grunstein, M.3
-
123
-
-
7044250740
-
Lysine acetylation and the bromodomain: A new partnership for signaling
-
PMID:15382140, doi:10. 1002/bies.20104
-
Yang, X.J. 2004. Lysine acetylation and the bromodomain: a new partnership for signaling. Bioessays, 26(10): 1076-1087. doi:10. 1002/bies.20104. PMID:15382140.
-
(2004)
Bioessays
, vol.26
, Issue.10
, pp. 1076-1087
-
-
Yang, X.J.1
-
124
-
-
15944416371
-
Histone H4 lysine 91 acetylation a core domain modification associated with chromatin assembly
-
PMID: 15808514, doi:10.1016/j.molcel.2005.02.031
-
Ye, J., Ai, X., Eugeni, E.E., Zhang, L., Carpenter, L.R., Jelinek, M.A., et al. 2005. Histone H4 lysine 91 acetylation a core domain modification associated with chromatin assembly. Mol. Cell, 18(1): 123-130. doi:10.1016/j.molcel.2005.02.031. PMID: 15808514.
-
(2005)
Mol. Cell
, vol.18
, Issue.1
, pp. 123-130
-
-
Ye, J.1
Ai, X.2
Eugeni, E.E.3
Zhang, L.4
Carpenter, L.R.5
Jelinek, M.A.6
-
125
-
-
22744432660
-
Genome-scale identification of nucleosome positions in S. cerevisiae
-
PMID:15961632, doi:10.1126/science.1112178
-
Yuan, G.C., Liu, Y.J., Dion, M.F., Slack, M.D., Wu, L.F., Altschuler, S.J., and Rando, O.J. 2005. Genome-scale identification of nucleosome positions in S. cerevisiae. Science, 309(5734): 626-630. doi:10.1126/science.1112178. PMID:15961632.
-
(2005)
Science
, vol.309
, Issue.5734
, pp. 626-630
-
-
Yuan, G.C.1
Liu, Y.J.2
Dion, M.F.3
Slack, M.D.4
Wu, L.F.5
Altschuler, S.J.6
Rando, O.J.7
-
126
-
-
41449114497
-
Structural basis of site-specific histone recognition by the bromodomains of human coactivators PCAF and CBP/ p300
-
PMID:18400184, doi:10.1016/j.str.2008.01.010
-
Zeng, L., Zhang, Q., Gerona-Navarro, G., Moshkina, N., and Zhou, M.M. 2008. Structural basis of site-specific histone recognition by the bromodomains of human coactivators PCAF and CBP/ p300. Structure, 16(4): 643-652. doi:10.1016/j.str.2008.01.010. PMID:18400184.
-
(2008)
Structure
, vol.16
, Issue.4
, pp. 643-652
-
-
Zeng, L.1
Zhang, Q.2
Gerona-Navarro, G.3
Moshkina, N.4
Zhou, M.M.5
-
127
-
-
0032101179
-
Essential and redundant functions of histone acetyla-tion revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase
-
PMID:9606197, doi:10.1093/ emboj/17.11.3155
-
Zhang, W., Bone, J.R., Edmondson, D.G., Turner, B.M., and Roth, S.Y. 1998. Essential and redundant functions of histone acetyla-tion revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. 17(11): 3155-3167. doi:10.1093/ emboj/17.11.3155. PMID:9606197.
-
(1998)
EMBO J
, vol.17
, Issue.11
, pp. 3155-3167
-
-
Zhang, W.1
Bone, J.R.2
Edmondson, D.G.3
Turner, B.M.4
Roth, S.Y.5
-
128
-
-
0037385490
-
Structures and interactions of the core histone tail domains
-
PMID:12666178, doi:10. 1002/bip.10303
-
Zheng, C., and Hayes, J.J. 2003. Structures and interactions of the core histone tail domains. Biopolymers, 68(4): 539-546. doi:10. 1002/bip.10303. PMID:12666178.
-
(2003)
Biopolymers
, vol.68
, Issue.4
, pp. 539-546
-
-
Zheng, C.1
Hayes, J.J.2
|