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Volumn 111, Issue 3, 2002, Pages 369-379

Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE ACETYLTRANSFERASE GCN5; PROTEIN; PROTEIN NUA4; PROTEIN SNF2; PROTEIN SPT7; PROTEIN SWI2; TRANSCRIPTION FACTOR SAGA; UNCLASSIFIED DRUG;

EID: 0036847620     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(02)01005-X     Document Type: Article
Times cited : (435)

References (49)
  • 1
    • 0033681250 scopus 로고    scopus 로고
    • Ordered recruitment of chromatin modifying and general transcription factors to the IFN-β promoter
    • Agalioti T., Lomvardas S., Parekh B., Yie J., Maniatis T., Thanos D. Ordered recruitment of chromatin modifying and general transcription factors to the IFN-β promoter. Cell. 103:2000;667-678.
    • (2000) Cell , vol.103 , pp. 667-678
    • Agalioti, T.1    Lomvardas, S.2    Parekh, B.3    Yie, J.4    Maniatis, T.5    Thanos, D.6
  • 2
    • 0035423749 scopus 로고    scopus 로고
    • SAGA is an essential in vivo target of the yeast acidic activator Gal4p
    • Bhaumik S.R., Green M.R. SAGA is an essential in vivo target of the yeast acidic activator Gal4p. Genes Dev. 15:2001;1935-1945.
    • (2001) Genes Dev. , vol.15 , pp. 1935-1945
    • Bhaumik, S.R.1    Green, M.R.2
  • 3
    • 0035933521 scopus 로고    scopus 로고
    • Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit
    • Brown C.E., Howe L., Sousa K., Alley S.C., Carrozza M.J., Tan S., Workman J.L. Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit. Science. 292:2001;2333-2337.
    • (2001) Science , vol.292 , pp. 2333-2337
    • Brown, C.E.1    Howe, L.2    Sousa, K.3    Alley, S.C.4    Carrozza, M.J.5    Tan, S.6    Workman, J.L.7
  • 5
    • 0033231625 scopus 로고    scopus 로고
    • Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains
    • Cairns B.R., Schlichter A., Erdjument-Bromage H., Tempst P., Kornberg R.D., Winston F. Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains. Mol. Cell. 4:1999;715-723.
    • (1999) Mol. Cell , vol.4 , pp. 715-723
    • Cairns, B.R.1    Schlichter, A.2    Erdjument-Bromage, H.3    Tempst, P.4    Kornberg, R.D.5    Winston, F.6
  • 6
    • 0031031755 scopus 로고    scopus 로고
    • Histone acetyltransferase activity and interaction with ADA2 are critical for GCN5 function in vivo
    • Candau R., Zhou J.X., Allis C.D., Berger S.L. Histone acetyltransferase activity and interaction with ADA2 are critical for GCN5 function in vivo. EMBO J. 16:1997;555-565.
    • (1997) EMBO J. , vol.16 , pp. 555-565
    • Candau, R.1    Zhou, J.X.2    Allis, C.D.3    Berger, S.L.4
  • 7
    • 0037025327 scopus 로고    scopus 로고
    • Gal80 confers specificity on HAT complex interactions with activators
    • Carrozza M.J., John S., Sil A.K., Hopper J.E., Workman J.L. Gal80 confers specificity on HAT complex interactions with activators. J. Biol. Chem. 277:2002;24648-24652.
    • (2002) J. Biol. Chem. , vol.277 , pp. 24648-24652
    • Carrozza, M.J.1    John, S.2    Sil, A.K.3    Hopper, J.E.4    Workman, J.L.5
  • 8
    • 0033617334 scopus 로고    scopus 로고
    • Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter
    • Cosma M.P., Tanaka T., Nasmyth K. Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter. Cell. 97:1999;299-311.
    • (1999) Cell , vol.97 , pp. 299-311
    • Cosma, M.P.1    Tanaka, T.2    Nasmyth, K.3
  • 9
    • 0034964368 scopus 로고    scopus 로고
    • Cdk1 triggers association of RNA polymerase to cell cycle promoters only after recruitment of the mediator by SBF
    • Cosma M.P., Panizza S., Nasmyth K. Cdk1 triggers association of RNA polymerase to cell cycle promoters only after recruitment of the mediator by SBF. Mol. Cell. 7:2001;1213-1220.
    • (2001) Mol. Cell , vol.7 , pp. 1213-1220
    • Cosma, M.P.1    Panizza, S.2    Nasmyth, K.3
  • 11
    • 0033636323 scopus 로고    scopus 로고
    • ATP-driven chromatin remodeling activity and histone acetyltransferases act sequentially during transcription by RAR/RXR in vitro
    • Dilworth F.J., Fromental-Ramain C., Yamamoto K., Chambon P. ATP-driven chromatin remodeling activity and histone acetyltransferases act sequentially during transcription by RAR/RXR in vitro. Mol. Cell. 6:2000;1049-1058.
    • (2000) Mol. Cell , vol.6 , pp. 1049-1058
    • Dilworth, F.J.1    Fromental-Ramain, C.2    Yamamoto, K.3    Chambon, P.4
  • 13
    • 0028796702 scopus 로고
    • The Saccharomyces cerevisiae SPT7 gene encodes a very acidic protein important for transcription in vivo
    • Gansheroff L.J., Dollard C., Tan P., Winston F. The Saccharomyces cerevisiae SPT7 gene encodes a very acidic protein important for transcription in vivo. Genetics. 139:1995;523-536.
    • (1995) Genetics , vol.139 , pp. 523-536
    • Gansheroff, L.J.1    Dollard, C.2    Tan, P.3    Winston, F.4
  • 14
    • 0036532235 scopus 로고    scopus 로고
    • Heterochromatin: New possibilities for the inheritance of structure
    • Grewal S.I., Elgin S.C. Heterochromatin. new possibilities for the inheritance of structure Curr. Opin. Genet. Dev. 12:2002;178-187.
    • (2002) Curr. Opin. Genet. Dev. , vol.12 , pp. 178-187
    • Grewal, S.I.1    Elgin, S.C.2
  • 15
    • 0035937419 scopus 로고    scopus 로고
    • Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes
    • Hassan A.H., Neely K.E., Workman J.L. Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes. Cell. 104:2001;817-827.
    • (2001) Cell , vol.104 , pp. 817-827
    • Hassan, A.H.1    Neely, K.E.2    Workman, J.L.3
  • 18
    • 0022381911 scopus 로고
    • GCN4 protein, synthesized in vitro, binds HIS3 regulatory sequences: Implications for general control of amino acid biosynthetic genes in yeast
    • Hope I.A., Struhl K. GCN4 protein, synthesized in vitro, binds HIS3 regulatory sequences. implications for general control of amino acid biosynthetic genes in yeast Cell. 43:1985;177-188.
    • (1985) Cell , vol.43 , pp. 177-188
    • Hope, I.A.1    Struhl, K.2
  • 19
    • 0034387879 scopus 로고    scopus 로고
    • Solution structure and acetyl-lysine binding activity of the GCN5 bromodomain
    • Hudson B.P., Martinez-Yamout M.A., Dyson H.J., Wright P.E. Solution structure and acetyl-lysine binding activity of the GCN5 bromodomain. J. Mol. Biol. 304:2000;355-370.
    • (2000) J. Mol. Biol. , vol.304 , pp. 355-370
    • Hudson, B.P.1    Martinez-Yamout, M.A.2    Dyson, H.J.3    Wright, P.E.4
  • 20
    • 0034717183 scopus 로고    scopus 로고
    • Structure and function of a human TAFII250 double bromodomain module
    • Jacobson R.H., Ladurner A.G., King D.S., Tjian R. Structure and function of a human TAFII250 double bromodomain module. Science. 288:2000;1422-1425.
    • (2000) Science , vol.288 , pp. 1422-1425
    • Jacobson, R.H.1    Ladurner, A.G.2    King, D.S.3    Tjian, R.4
  • 22
    • 0034625801 scopus 로고    scopus 로고
    • Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl
    • Jia M.H., Larossa R.A., Lee J.M., Rafalski A., Derose E., Gonye G., Xue Z. Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl. Physiol. Genomics. 3:2000;83-92.
    • (2000) Physiol. Genomics , vol.3 , pp. 83-92
    • Jia, M.H.1    Larossa, R.A.2    Lee, J.M.3    Rafalski, A.4    Derose, E.5    Gonye, G.6    Xue, Z.7
  • 23
    • 0023958723 scopus 로고
    • ATR1, a Saccharomyces cerevisiae gene encoding a transmembrane protein required for aminotriazole resistance
    • Kanazawa S., Driscoll M., Struhl K. ATR1, a Saccharomyces cerevisiae gene encoding a transmembrane protein required for aminotriazole resistance. Mol. Cell. Biol. 8:1988;664-673.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 664-673
    • Kanazawa, S.1    Driscoll, M.2    Struhl, K.3
  • 24
    • 0033388858 scopus 로고    scopus 로고
    • In vivo cross-linking and immunoprecipitation for studying dynamic protein:DNA associations in a chromatin environment
    • Kuo M.H., Allis C.D. In vivo cross-linking and immunoprecipitation for studying dynamic protein:DNA associations in a chromatin environment. Methods. 19:1999;425-433.
    • (1999) Methods , vol.19 , pp. 425-433
    • Kuo, M.H.1    Allis, C.D.2
  • 25
    • 0034508137 scopus 로고    scopus 로고
    • Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription
    • Kuo M.H., vom Baur E., Struhl K., Allis C.D. Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription. Mol. Cell. 6:2000;1309-1320.
    • (2000) Mol. Cell , vol.6 , pp. 1309-1320
    • Kuo, M.H.1    Vom Baur, E.2    Struhl, K.3    Allis, C.D.4
  • 26
    • 0035425099 scopus 로고    scopus 로고
    • The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4
    • Larschan E., Winston F. The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4. Genes Dev. 15:2001;1946-1956.
    • (2001) Genes Dev. , vol.15 , pp. 1946-1956
    • Larschan, E.1    Winston, F.2
  • 27
    • 0025726160 scopus 로고
    • Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation
    • Laurent B.C., Treitel M.A., Carlson M. Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation. Proc. Natl. Acad. Sci. USA. 88:1991;2687-2691.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 2687-2691
    • Laurent, B.C.1    Treitel, M.A.2    Carlson, M.3
  • 28
    • 0027295019 scopus 로고
    • The yeast SNF2/SWI2 protein has a DNA-stimulated ATPase activity required for transcriptional activation
    • Laurent B.C., Treich I., Carlson M. The yeast SNF2/SWI2 protein has a DNA-stimulated ATPase activity required for transcriptional activation. Genes Dev. 7:1993;583-591.
    • (1993) Genes Dev. , vol.7 , pp. 583-591
    • Laurent, B.C.1    Treich, I.2    Carlson, M.3
  • 29
    • 0031820288 scopus 로고    scopus 로고
    • Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
    • Longtine M.S., McKenzie A. 3rd, Demarini D.J., Shah N.G., Wach A., Brachat A., Philippsen P., Pringle J.R. Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast. 14:1998;953-961.
    • (1998) Yeast , vol.14 , pp. 953-961
    • Longtine, M.S.1    McKenzie A. III2    Demarini, D.J.3    Shah, N.G.4    Wach, A.5    Brachat, A.6    Philippsen, P.7    Pringle, J.R.8
  • 30
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 Å resolution
    • Luger K., Mäder A.W., Richmond R.K., Sargent D.F., Richmond T.J. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature. 389:1997;251-260.
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mäder, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 31
    • 0027948984 scopus 로고
    • Functional similarity and physical association between GCN5 and ADA2: Putative transcriptional adaptors
    • Marcus G.A., Silverman N., Berger S.L., Horiuchi J., Guarente L. Functional similarity and physical association between GCN5 and ADA2. putative transcriptional adaptors EMBO J. 13:1994;4807-4815.
    • (1994) EMBO J. , vol.13 , pp. 4807-4815
    • Marcus, G.A.1    Silverman, N.2    Berger, S.L.3    Horiuchi, J.4    Guarente, L.5
  • 33
    • 0033213632 scopus 로고    scopus 로고
    • Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator
    • Natarajan K., Jackson B.M., Zhou H., Winston F., Hinnebusch A.G. Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator. Mol. Cell. 4:1999;657-664.
    • (1999) Mol. Cell , vol.4 , pp. 657-664
    • Natarajan, K.1    Jackson, B.M.2    Zhou, H.3    Winston, F.4    Hinnebusch, A.G.5
  • 34
    • 0033213277 scopus 로고    scopus 로고
    • Activation domain-mediated targeting of the SWI/SNF complex to promoters stimulates transcription from nucleosome arrays
    • Neely K.E., Hassan A.H., Wallberg A.E., Steger D.J., Cairns B.R., Wright A.P.H., Workman J.L. Activation domain-mediated targeting of the SWI/SNF complex to promoters stimulates transcription from nucleosome arrays. Mol. Cell. 4:1999;649-655.
    • (1999) Mol. Cell , vol.4 , pp. 649-655
    • Neely, K.E.1    Hassan, A.H.2    Wallberg, A.E.3    Steger, D.J.4    Cairns, B.R.5    Wright, A.P.H.6    Workman, J.L.7
  • 36
    • 0021715020 scopus 로고
    • Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae
    • Neigeborn L., Carlson M. Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae. Genetics. 108:1984;845-858.
    • (1984) Genetics , vol.108 , pp. 845-858
    • Neigeborn, L.1    Carlson, M.2
  • 37
    • 0033582943 scopus 로고    scopus 로고
    • The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4
    • Ornaghi P., Ballario P., Lena A.M., Gonzalez A., Filetici P. The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4. J. Mol. Biol. 287:1999;1-7.
    • (1999) J. Mol. Biol. , vol.287 , pp. 1-7
    • Ornaghi, P.1    Ballario, P.2    Lena, A.M.3    Gonzalez, A.4    Filetici, P.5
  • 38
    • 0034669210 scopus 로고    scopus 로고
    • The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p
    • Owen D.J., Ornaghi P., Yang J.C., Lowe N., Evans P.R., Ballario P., Neuhaus D., Filetici P., Travers A.A. The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p. EMBO J. 19:2000;6141-6149.
    • (2000) EMBO J. , vol.19 , pp. 6141-6149
    • Owen, D.J.1    Ornaghi, P.2    Yang, J.C.3    Lowe, N.4    Evans, P.R.5    Ballario, P.6    Neuhaus, D.7    Filetici, P.8    Travers, A.A.9
  • 39
    • 0030881740 scopus 로고    scopus 로고
    • Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression
    • Pollard K.J., Peterson C.L. Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression. Mol. Cell. Biol. 17:1997;6212-6222.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 6212-6222
    • Pollard, K.J.1    Peterson, C.L.2
  • 40
    • 0035265922 scopus 로고    scopus 로고
    • A transient histone hyperacetylation signal marks nucleosomes for remodeling at the PHO8 promoter in vivo
    • Reinke H., Gregory P.D., Hörz W. A transient histone hyperacetylation signal marks nucleosomes for remodeling at the PHO8 promoter in vivo. Mol. Cell. 7:2001;529-538.
    • (2001) Mol. Cell , vol.7 , pp. 529-538
    • Reinke, H.1    Gregory, P.D.2    Hörz, W.3
  • 41
    • 0030876429 scopus 로고    scopus 로고
    • Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes
    • Roberts S.M., Winston F. Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes. Genetics. 147:1997;451-465.
    • (1997) Genetics , vol.147 , pp. 451-465
    • Roberts, S.M.1    Winston, F.2
  • 42
    • 0037040550 scopus 로고    scopus 로고
    • Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation
    • Soutoglou E., Talianidis I. Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation. Science. 295:2002;1901-1904.
    • (2002) Science , vol.295 , pp. 1901-1904
    • Soutoglou, E.1    Talianidis, I.2
  • 43
    • 0032911635 scopus 로고    scopus 로고
    • Functional organization of the yeast SAGA complex: Distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction
    • Sterner D.E., Grant P.A., Roberts S.M., Duggan L., Belotserkovskaya R., Pacella L.A., Winston F., Workman J.L., Berger S.L. Functional organization of the yeast SAGA complex. distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction Mol. Cell. Biol. 19:1999;86-98.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 86-98
    • Sterner, D.E.1    Grant, P.A.2    Roberts, S.M.3    Duggan, L.4    Belotserkovskaya, R.5    Pacella, L.A.6    Winston, F.7    Workman, J.L.8    Berger, S.L.9
  • 44
    • 0033151812 scopus 로고    scopus 로고
    • The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5
    • Sudarsanam P., Cao Y., Wu L., Laurent B.C., Winston F. The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5. EMBO J. 18:1999;3101-3106.
    • (1999) EMBO J. , vol.18 , pp. 3101-3106
    • Sudarsanam, P.1    Cao, Y.2    Wu, L.3    Laurent, B.C.4    Winston, F.5
  • 45
    • 0034704815 scopus 로고    scopus 로고
    • The Gcn5 bromodomain co-ordinates nucleosome remodelling
    • Syntichaki P., Topalidou I., Thireos G. The Gcn5 bromodomain co-ordinates nucleosome remodelling. Nature. 404:2000;414-417.
    • (2000) Nature , vol.404 , pp. 414-417
    • Syntichaki, P.1    Topalidou, I.2    Thireos, G.3
  • 47
    • 0034212345 scopus 로고    scopus 로고
    • Distribution of acetylated histones resulting from Gal4-VP16 recruitment of SAGA and NuA4 complexes
    • Vignali M., Steger D.J., Neely K.E., Workman J.L. Distribution of acetylated histones resulting from Gal4-VP16 recruitment of SAGA and NuA4 complexes. EMBO J. 19:2000;2629-2640.
    • (2000) EMBO J. , vol.19 , pp. 2629-2640
    • Vignali, M.1    Steger, D.J.2    Neely, K.E.3    Workman, J.L.4
  • 48
    • 0033999965 scopus 로고    scopus 로고
    • Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor τ1 activation domain
    • Wallberg A.E., Neely K.E., Hassan A.H., Gustafsson J.-Å., Workman J.L., Wright A.P.H. Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor τ1 activation domain. Mol. Cell. Biol. 20:2000;2004-2013.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 2004-2013
    • Wallberg, A.E.1    Neely, K.E.2    Hassan, A.H.3    Gustafsson, J.-Å.4    Workman, J.L.5    Wright, A.P.H.6
  • 49
    • 0033568237 scopus 로고    scopus 로고
    • Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators
    • Yudkovsky N., Logie C., Hahn S., Peterson C.L. Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators. Genes Dev. 13:1999;2369-2374.
    • (1999) Genes Dev. , vol.13 , pp. 2369-2374
    • Yudkovsky, N.1    Logie, C.2    Hahn, S.3    Peterson, C.L.4


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