-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0032190230
-
AT hook motifs in a wide variety of DNA-binding proteins
-
Aravind, L., and Landsman, D. (1998). AT hook motifs in a wide variety of DNA-binding proteins. Nucleic Acids Res. 26, 4413-4421.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4413-4421
-
-
Aravind, L.1
Landsman, D.2
-
3
-
-
0033561043
-
Continuous and widespread role for Swi-Snf complex in transcription
-
Biggar, S.R., and Crabtree, G.R. (1999). Continuous and widespread role for Swi-Snf complex in transcription. EMBO J. 18, 2254-2264.
-
(1999)
EMBO J.
, vol.18
, pp. 2254-2264
-
-
Biggar, S.R.1
Crabtree, G.R.2
-
4
-
-
0033050066
-
The activity of brm/Snf2a is dependent on a high-mobility group protein I/Y-like DNA binding domain
-
Bourachot, B., Yaniv, M., and Muchardt, C.M. (1999). The activity of brm/Snf2a is dependent on a high-mobility group protein I/Y-like DNA binding domain. Mol. Cell. Biol. 19, 3931-3939.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 3931-3939
-
-
Bourachot, B.1
Yaniv, M.2
Muchardt, C.M.3
-
5
-
-
0031941159
-
Chromatin remodeling machines: Similar motors, ulterior motives
-
Cairns, B.R. (1998). Chromatin remodeling machines: similar motors, ulterior motives. Trends Biochem. Sci. 23, 20-25.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 20-25
-
-
Cairns, B.R.1
-
6
-
-
0030447612
-
RSC, an essential, abundant chromatin remodeling complex
-
Cairns, B.R., Lorch, Y., Li, Y., Zhang, M., Lacomis, L., Erdjument-Bromage, H., Tempst, P., Du, J., Laurent, B., and Kornberg, R.D. (1996). RSC, an essential, abundant chromatin remodeling complex. Cell 87, 1249-1260.
-
(1996)
Cell
, vol.87
, pp. 1249-1260
-
-
Cairns, B.R.1
Lorch, Y.2
Li, Y.3
Zhang, M.4
Lacomis, L.5
Erdjument-Bromage, H.6
Tempst, P.7
Du, J.8
Laurent, B.9
Kornberg, R.D.10
-
7
-
-
0032214123
-
Two actin-related proteins are shared functional components of the chromatin-remodeling complexes RSC and SWI/ SNF
-
Cairns, B.R., Erdjument-Bromage, H., Tempst, P., Winston, F., Kornberg, R.D. (1998). Two actin-related proteins are shared functional components of the chromatin-remodeling complexes RSC and SWI/ SNF. Mol. Cell 2, 639-651.
-
(1998)
Mol. Cell
, vol.2
, pp. 639-651
-
-
Cairns, B.R.1
Erdjument-Bromage, H.2
Tempst, P.3
Winston, F.4
Kornberg, R.D.5
-
8
-
-
0032991918
-
The BAH (bromo-adjacent homology) domain: A link between DNA methylation, replication, and transcriptional regulation
-
Callebaut, I., Courvalin, J.C., and Mornon, J.P. (1999). The BAH (bromo-adjacent homology) domain: a link between DNA methylation, replication, and transcriptional regulation. FEBS Lett. 446, 189-193.
-
(1999)
FEBS Lett.
, vol.446
, pp. 189-193
-
-
Callebaut, I.1
Courvalin, J.C.2
Mornon, J.P.3
-
9
-
-
0031031755
-
Histone acetyltransferase activity and interaction with ADA2 are critical for GCN5 function in vivo
-
Candau, R., Zhou, J.X., Allis, C.D., and Berger, S.L. (1997). Histone acetyltransferase activity and interaction with ADA2 are critical for GCN5 function in vivo. EMBO J. 16, 555-565.
-
(1997)
EMBO J.
, vol.16
, pp. 555-565
-
-
Candau, R.1
Zhou, J.X.2
Allis, C.D.3
Berger, S.L.4
-
10
-
-
0030946972
-
Sfh1p, a component of a novel chromatin-remodeling complex, is required for cell cycle progression
-
Cao, Y., Cairns, B.R., Kornberg, R.D., and Laurent, B.L. (1997). Sfh1p, a component of a novel chromatin-remodeling complex, is required for cell cycle progression. Mol. Cell. Biol. 17, 3323-3334.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 3323-3334
-
-
Cao, Y.1
Cairns, B.R.2
Kornberg, R.D.3
Laurent, B.L.4
-
11
-
-
0033519641
-
Structure and ligand of a histone acetyltransferase bromodomain
-
Dhalluin, C., Carlson, J.E., Zeng, L., He, C., Aggarwal, A.K., and Zhou, M.-M. (1999). Structure and ligand of a histone acetyltransferase bromodomain. Nature 399, 491-496.
-
(1999)
Nature
, vol.399
, pp. 491-496
-
-
Dhalluin, C.1
Carlson, J.E.2
Zeng, L.3
He, C.4
Aggarwal, A.K.5
Zhou, M.-M.6
-
12
-
-
0031769946
-
Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins
-
Du, J., Nasir, I., Benton, B.K., Kladde, M.P., and Laurent, B.C. (1998). Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins. Genetics 150, 987-1005.
-
(1998)
Genetics
, vol.150
, pp. 987-1005
-
-
Du, J.1
Nasir, I.2
Benton, B.K.3
Kladde, M.P.4
Laurent, B.C.5
-
13
-
-
0028566645
-
High-sensitivity sequencing of large proteins: Partial structure of the rapamycin-FKBP12 target
-
Erdjument-Bromage, H., Lui, M., Sabatini, D.M., Snyder, S.H., and Tempst, P. (1994). High-sensitivity sequencing of large proteins: partial structure of the rapamycin-FKBP12 target. Protein Sci. 3, 2435-2446.
-
(1994)
Protein Sci.
, vol.3
, pp. 2435-2446
-
-
Erdjument-Bromage, H.1
Lui, M.2
Sabatini, D.M.3
Snyder, S.H.4
Tempst, P.5
-
14
-
-
0032504104
-
A subset of TAFIIs are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation
-
Grant, P.A., Schieltz, D., Pray-Grant, M.G., Steger, D.J., Reese, J.C., Yates, J.R., III, and Workman, J.L. (1998). A subset of TAFIIs are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation. Cell 94, 45-53.
-
(1998)
Cell
, vol.94
, pp. 45-53
-
-
Grant, P.A.1
Schieltz, D.2
Pray-Grant, M.G.3
Steger, D.J.4
Reese, J.C.5
Yates J.R. III6
Workman, J.L.7
-
15
-
-
0030798245
-
Histone acetylation in chromatin structure and transcription
-
Grunstein, M. (1997). Histone acetylation in chromatin structure and transcription. Nature 389, 349-352.
-
(1997)
Nature
, vol.389
, pp. 349-352
-
-
Grunstein, M.1
-
16
-
-
0031840672
-
Molecular genetics of the RNA polymerase II general transcriptional machinery
-
Hampsey, M. (1999). Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol. Mol. Biol. Rev. 62, 465-503.
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 465-503
-
-
Hampsey, M.1
-
17
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
Holstege, F.C., Jennings, E.G., Wyrick, J.J., Lee, T.I., Hengartner, C.J., Green, M.R., Golub, T.R., Lander, E.S., and Young, R.A. (1998). Dissecting the regulatory circuitry of a eukaryotic genome. Cell 25, 717-728.
-
(1998)
Cell
, vol.25
, pp. 717-728
-
-
Holstege, F.C.1
Jennings, E.G.2
Wyrick, J.J.3
Lee, T.I.4
Hengartner, C.J.5
Green, M.R.6
Golub, T.R.7
Lander, E.S.8
Young, R.A.9
-
18
-
-
0030764158
-
The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif
-
Huth, J.R., Bewley, C.A., Nissen, M.S., Evans, J.N., Reeves, R., Gronenborn, A.M., Clore, G.M. (1997). The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif. Nat. Struct. Biol. 4, 657-665.
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 657-665
-
-
Huth, J.R.1
Bewley, C.A.2
Nissen, M.S.3
Evans, J.N.4
Reeves, R.5
Gronenborn, A.M.6
Clore, G.M.7
-
19
-
-
0031138034
-
The bromodomain revisited
-
Jeanmougin, F., Wurtz, J.M., Le Douarin, B., Chambon, P., and Losson, R. (1997). The bromodomain revisited. Trends Biochem. Sci. 22, 151-153.
-
(1997)
Trends Biochem. Sci.
, vol.22
, pp. 151-153
-
-
Jeanmougin, F.1
Wurtz, J.M.2
Le Douarin, B.3
Chambon, P.4
Losson, R.5
-
20
-
-
0029917840
-
Repression and activation by multiprotein complexes that alter transcription
-
Kingston, R.E., Bunker, C.A., and Imbalzano, A.N. (1996). Repression and activation by multiprotein complexes that alter transcription. Genes Dev. 10, 905-920.
-
(1996)
Genes Dev.
, vol.10
, pp. 905-920
-
-
Kingston, R.E.1
Bunker, C.A.2
Imbalzano, A.N.3
-
21
-
-
0032142918
-
Roles of histone acetyltransferases and deacetylases in gene regulation
-
Kuo, M.H., and Allis, D. (1998). Roles of histone acetyltransferases and deacetylases in gene regulation. Bioessays 20, 615-626.
-
(1998)
Bioessays
, vol.20
, pp. 615-626
-
-
Kuo, M.H.1
Allis, D.2
-
22
-
-
0026528477
-
An essential Saccharomyces cerevisiae gene homologous to SNF2 encodes a helicase-related protein in a new family
-
Laurent, B.C., Yang, X., and Carlson, M. (1992). An essential Saccharomyces cerevisiae gene homologous to SNF2 encodes a helicase-related protein in a new family. Mol. Cell. Biol. 12, 1893-1902.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 1893-1902
-
-
Laurent, B.C.1
Yang, X.2
Carlson, M.3
-
23
-
-
0033577781
-
Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC
-
Moriera, J.M., and Holmberg, S. (1999). Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC. EMBO J. 18, 2836-2844.
-
(1999)
EMBO J.
, vol.18
, pp. 2836-2844
-
-
Moriera, J.M.1
Holmberg, S.2
-
24
-
-
0030579191
-
Molecular cloning of polybromo, a nuclear protein containing multiple domains including five bromodomains, a truncated HMG box, and two repeats of a novel domain
-
Nicolas, R.H., and Goodwin, G.H. (1996). Molecular cloning of polybromo, a nuclear protein containing multiple domains including five bromodomains, a truncated HMG box, and two repeats of a novel domain. Gene 175, 233-240.
-
(1996)
Gene
, vol.175
, pp. 233-240
-
-
Nicolas, R.H.1
Goodwin, G.H.2
-
25
-
-
0032504040
-
Histone-like TAFs within the PCAF histone acetylase complex
-
Ogryzko, V.V., Kotani, T., Zhang, X., Schiltz, R.L., Howard, T., Yang, X.J., Howard, B.H., Qin, J., Nakatani, Y. (1998). Histone-like TAFs within the PCAF histone acetylase complex. Cell 94, 35-44.
-
(1998)
Cell
, vol.94
, pp. 35-44
-
-
Ogryzko, V.V.1
Kotani, T.2
Zhang, X.3
Schiltz, R.L.4
Howard, T.5
Yang, X.J.6
Howard, B.H.7
Qin, J.8
Nakatani, Y.9
-
26
-
-
0033582943
-
The bromodomain of gcn5p interacts in vitro with specific residues in the N terminus of histone H4
-
Ornaghi, P., Ballario, P., Lena, A.M., Gonzalez, A., and Filetici, P. (1999). The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4. J. Mol. Biol. 287, 1-7.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 1-7
-
-
Omaghi, P.1
Ballario, P.2
Lena, A.M.3
Gonzalez, A.4
Filetici, P.5
-
27
-
-
0028966257
-
Experimental analysis of chromatin function in transcriptional control
-
Owen-Hughes, T., and Workman, J.L. (1994). Experimental analysis of chromatin function in transcriptional control. Crit. Rev. Eukaryot. Gene Expr. 4, 403-441.
-
(1994)
Crit. Rev. Eukaryot. Gene Expr.
, vol.4
, pp. 403-441
-
-
Owen-Hughes, T.1
Workman, J.L.2
-
28
-
-
0028987268
-
The SWI/SNF complex: A chromatin remodeling machine?
-
Peterson, C.L., and Tamkun, J. (1995). The SWI/SNF complex: a chromatin remodeling machine? Trends Biochem. Sci. 20, 143-146.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 143-146
-
-
Peterson, C.L.1
Tamkun, J.2
-
29
-
-
0032171040
-
Chromatin remodeling: A marriage between two families
-
Pollard, K.J., and Peterson, C.L. (1998). Chromatin remodeling: a marriage between two families. Bioessays 20, 771-780.
-
(1998)
Bioessays
, vol.20
, pp. 771-780
-
-
Pollard, K.J.1
Peterson, C.L.2
-
30
-
-
0025196283
-
The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure
-
Reeves, R., and Nissen, M.S. (1990). The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure. J. Biol. Chem. 265, 8573-8582.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 8573-8582
-
-
Reeves, R.1
Nissen, M.S.2
-
31
-
-
0030876429
-
Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes
-
Roberts, S., and Winston, F. (1997). Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/Mediator complexes. Genetics 147, 451-465.
-
(1997)
Genetics
, vol.147
, pp. 451-465
-
-
Roberts, S.1
Winston, F.2
-
33
-
-
0024669291
-
A system of vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
-
Sikorski, R.S., and Hieter, P. (1989). A system of vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
-
(1989)
Genetics
, vol.122
, pp. 19-27
-
-
Sikorski, R.S.1
Hieter, P.2
-
34
-
-
0032911635
-
Functional organization of the yeast SAGA complex: Distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction
-
Sterner, D.E., Grant, P.A., Roberts, S.M., Duggan, L.J., Belotserkovskaya, R., Pacella, L.A., Winston, F., Workman, J.L., and Berger, S.L. (1999). Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction. Mol. Cell. Biol. 19, 86-98.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 86-98
-
-
Sterner, D.E.1
Grant, P.A.2
Roberts, S.M.3
Duggan, L.J.4
Belotserkovskaya, R.5
Pacella, L.A.6
Winston, F.7
Workman, J.L.8
Berger, S.L.9
-
35
-
-
0033151812
-
The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5
-
Sudarsanam, P., Cao, Y., Wu, L., Laurent, B.C., and Winston, F. (1999). The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5. EMBO J. 18, 3101-3106.
-
(1999)
EMBO J.
, vol.18
, pp. 3101-3106
-
-
Sudarsanam, P.1
Cao, Y.2
Wu, L.3
Laurent, B.C.4
Winston, F.5
-
36
-
-
0030952319
-
Interaction of a Swi3 homolog with Sth1 provides evidence for a Swi/Snf-related complex with an essential function in Saccharomyces cerevisiae
-
Treich, I., and Carlson, M. (1997). Interaction of a Swi3 homolog with Sth1 provides evidence for a Swi/Snf-related complex with an essential function in Saccharomyces cerevisiae. Mol. Cell. Biol. 17, 1768-1775.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 1768-1775
-
-
Treich, I.1
Carlson, M.2
-
37
-
-
0029994549
-
The Drosophila ash1 gene product, which is localized at specific sites on polytene chromosomes, contains a SET domain and a PHD finger
-
Tripoulas, N., LaJeunesse, K., Gildea, J., and Shearn, A. (1996). The Drosophila ash1 gene product, which is localized at specific sites on polytene chromosomes, contains a SET domain and a PHD finger. Genetics 143, 913-928.
-
(1996)
Genetics
, vol.143
, pp. 913-928
-
-
Tripoulas, N.1
Lajeunesse, K.2
Gildea, J.3
Shearn, A.4
-
38
-
-
0026713876
-
The Saccharomyces cerevisiae NPS1 gene, a novel CDC gene which encodes a 160 kDa nuclear protein involved in G2 phase control
-
Tsuchiya, E., Uno, A., Masuoka, K., Kanemori, Y., Okabe, S., and Mikayawa, T. (1992). The Saccharomyces cerevisiae NPS1 gene, a novel CDC gene which encodes a 160 kDa nuclear protein involved in G2 phase control. EMBO J. 11, 4017-4026.
-
(1992)
EMBO J.
, vol.11
, pp. 4017-4026
-
-
Tsuchiya, E.1
Uno, A.2
Masuoka, K.3
Kanemori, Y.4
Okabe, S.5
Mikayawa, T.6
-
39
-
-
0033558873
-
Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae
-
Tsukiyama, T., Palmer, J., Landel, C.C., Shiloach, J., and Wu, C. (1999). Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae. Genes Dev. 13, 686-697.
-
(1999)
Genes Dev.
, vol.13
, pp. 686-697
-
-
Tsukiyama, T.1
Palmer, J.2
Landel, C.C.3
Shiloach, J.4
Wu, C.5
-
40
-
-
0030947344
-
Molecular evidence for an ancient duplication of the entire yeast genome
-
Wolfe, K.H., and Shields, D.C. (1997). Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387, 708-713.
-
(1997)
Nature
, vol.387
, pp. 708-713
-
-
Wolfe, K.H.1
Shields, D.C.2
-
41
-
-
17444386662
-
The bromodomain: A chromatintargeting module?
-
Winston, F., and Allis, C.D. (1999). ]bromodomain: a chromatintargeting module? Nat. Struct. Biol. 6, 601-604.
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 601-604
-
-
Winston, F.1
Allis, C.D.2
-
42
-
-
0031707751
-
Alteration of nucleosome structure as a mechanism of transcriptional regulation
-
Workman, J., and Kingston, R.E. (1998). Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 67, 545-579.
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 545-579
-
-
Workman, J.1
Kingston, R.E.2
-
43
-
-
0032928293
-
Nps1/Sth1p, a component of an essential chromatin-remodeling complex of Saccharomyces cerevisiae, is required for the maximal expression of early meiotic genes
-
Yukawa, M., Katoh, S., Miyakawa, T., and Tsuchiya, E. (1999). Nps1/ Sth1p, a component of an essential chromatin-remodeling complex of Saccharomyces cerevisiae, is required for the maximal expression of early meiotic genes. Genes Cells 4, 99-110.
-
(1999)
Genes Cells
, vol.4
, pp. 99-110
-
-
Yukawa, M.1
Katoh, S.2
Miyakawa, T.3
Tsuchiya, E.4
|